pull-requests: fixed source of changes to be using shadow repos if it exists....

pull-requests: fixed source of changes to be using shadow repos if it exists. - previous logic was flaved as the OR condition always used the main repo - in case of GIT push -f and rebase we lost commits in the repo resulting in problems of displaying versions of pull-requests.

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Issue Tracker Integration

You can set an issue tracker connection in two ways with |RCE|.

At the instance level, you can set a default issue tracker.
At the |repo| level, you can configure an integration with a different issue tracker.

To integrate |RCE| with an issue tracker, you need to define a regular expression that will fetch the issue ID stored in commit messages, and replace it with a URL. This enables |RCE| to generate a link matching each issue to the target |repo|.

Default Issue Tracker Configuration

To integrate your issue tracker, use the following steps:

Open :menuselection:`Admin --> Settings --> Issue Tracker`.
In the new entry field, enter the following information:
- :guilabel:`Description`: A name for this set of rules.
- :guilabel:`Pattern`: The regular expression that will match issues tagged in commit messages, or more see :ref:`issue-tr-eg-ref`.
- :guilabel:`URL`: The URL to your issue tracker.
- :guilabel:`Prefix`: The prefix with which you want to mark issues.
Select Add so save the rule to your issue tracker configuration.

Repository Issue Tracker Configuration

You can configure specific |repos| to use a different issue tracker than the default one. See the instructions in :ref:`repo-it`

Jira Integration