fix(permissions): added a common way to update private flag via repo model...

fix(permissions): added a common way to update private flag via repo model - this allows to have a one and only one way to control the flag with the business logic shared - added test for that - changed view to use this method instead of DB update and custom permissions flush - fixed a case when update of repo settings didn't flush permissions actually while it should when private flag changed

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Workflow Support

|RCE| supports a number of developer workflows depending on whichever setup your team wishes to adopt. Use the information in the following sections to get an idea of what may work best for you.

	Site-wide shortcuts
/	Use quick search box
g h	Goto home page
g g	Goto my private gists page
g G	Goto my public gists page
g 0-9	Goto bookmarked items from 0-9
n r	New repository page
n g	New gist page

	Repositories
g s	Goto summary page
g c	Goto changelog page
g f	Goto files page
g F	Goto files page with file search activated
g p	Goto pull requests page
g o	Goto repository settings
g O	Goto repository access permissions settings
t s	Toggle sidebar on some pages