reference.txt
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Brian E Granger
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r1258 | ================= | ||
IPython reference | ||||
================= | ||||
Brian Granger
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r2276 | .. warning:: | ||
As of the 0.11 version of IPython, some of the features and APIs | ||||
described in this section have been deprecated or are broken. Our plan | ||||
is to continue to support these features, but they need to be updated | ||||
to take advantage of recent API changes. Furthermore, this section | ||||
of the documentation need to be updated to reflect all of these changes. | ||||
Fernando Perez
|
r1695 | .. _command_line_options: | ||
Brian E Granger
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r1258 | |||
Command-line usage | ||||
================== | ||||
You start IPython with the command:: | ||||
$ ipython [options] files | ||||
If invoked with no options, it executes all the files listed in sequence | ||||
and drops you into the interpreter while still acknowledging any options | ||||
you may have set in your ipythonrc file. This behavior is different from | ||||
standard Python, which when called as python -i will only execute one | ||||
file and ignore your configuration setup. | ||||
Please note that some of the configuration options are not available at | ||||
the command line, simply because they are not practical here. Look into | ||||
your ipythonrc configuration file for details on those. This file | ||||
typically installed in the $HOME/.ipython directory. For Windows users, | ||||
$HOME resolves to C:\\Documents and Settings\\YourUserName in most | ||||
instances. In the rest of this text, we will refer to this directory as | ||||
Brian Granger
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r2322 | IPYTHON_DIR. | ||
Brian E Granger
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r1258 | |||
Special Threading Options | ||||
------------------------- | ||||
Brian Granger
|
r2197 | Previously IPython had command line options for controlling GUI event loop | ||
integration (-gthread, -qthread, -q4thread, -wthread, -pylab). As of IPython | ||||
version 0.11, these have been deprecated. Please see the new ``%gui`` | ||||
magic command or :ref:`this section <gui_support>` for details on the new | ||||
interface. | ||||
Brian E Granger
|
r1258 | |||
Regular Options | ||||
--------------- | ||||
After the above threading options have been given, regular options can | ||||
follow in any order. All options can be abbreviated to their shortest | ||||
non-ambiguous form and are case-sensitive. One or two dashes can be | ||||
used. Some options have an alternate short form, indicated after a ``|``. | ||||
Most options can also be set from your ipythonrc configuration file. See | ||||
the provided example for more details on what the options do. Options | ||||
given at the command line override the values set in the ipythonrc file. | ||||
All options with a [no] prepended can be specified in negated form | ||||
(-nooption instead of -option) to turn the feature off. | ||||
-help print a help message and exit. | ||||
-pylab | ||||
Brian Granger
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r2197 | Deprecated. See :ref:`Matplotlib support <matplotlib_support>` | ||
for more details. | ||||
Brian E Granger
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r1258 | |||
-autocall <val> | ||||
Make IPython automatically call any callable object even if you | ||||
didn't type explicit parentheses. For example, 'str 43' becomes | ||||
'str(43)' automatically. The value can be '0' to disable the feature, | ||||
'1' for smart autocall, where it is not applied if there are no more | ||||
arguments on the line, and '2' for full autocall, where all callable | ||||
objects are automatically called (even if no arguments are | ||||
present). The default is '1'. | ||||
-[no]autoindent | ||||
Turn automatic indentation on/off. | ||||
-[no]automagic | ||||
make magic commands automatic (without needing their first character | ||||
to be %). Type %magic at the IPython prompt for more information. | ||||
-[no]autoedit_syntax | ||||
When a syntax error occurs after editing a file, automatically | ||||
open the file to the trouble causing line for convenient | ||||
fixing. | ||||
-[no]banner Print the initial information banner (default on). | ||||
-c <command> | ||||
execute the given command string. This is similar to the -c | ||||
option in the normal Python interpreter. | ||||
-cache_size, cs <n> | ||||
size of the output cache (maximum number of entries to hold in | ||||
memory). The default is 1000, you can change it permanently in your | ||||
config file. Setting it to 0 completely disables the caching system, | ||||
and the minimum value accepted is 20 (if you provide a value less than | ||||
20, it is reset to 0 and a warning is issued) This limit is defined | ||||
because otherwise you'll spend more time re-flushing a too small cache | ||||
than working. | ||||
-classic, cl | ||||
Gives IPython a similar feel to the classic Python | ||||
prompt. | ||||
-colors <scheme> | ||||
Color scheme for prompts and exception reporting. Currently | ||||
implemented: NoColor, Linux and LightBG. | ||||
-[no]color_info | ||||
IPython can display information about objects via a set of functions, | ||||
and optionally can use colors for this, syntax highlighting source | ||||
code and various other elements. However, because this information is | ||||
passed through a pager (like 'less') and many pagers get confused with | ||||
color codes, this option is off by default. You can test it and turn | ||||
it on permanently in your ipythonrc file if it works for you. As a | ||||
reference, the 'less' pager supplied with Mandrake 8.2 works ok, but | ||||
that in RedHat 7.2 doesn't. | ||||
Test it and turn it on permanently if it works with your | ||||
system. The magic function %color_info allows you to toggle this | ||||
interactively for testing. | ||||
-[no]debug | ||||
Show information about the loading process. Very useful to pin down | ||||
problems with your configuration files or to get details about | ||||
session restores. | ||||
-[no]deep_reload: | ||||
IPython can use the deep_reload module which reloads changes in | ||||
modules recursively (it replaces the reload() function, so you don't | ||||
need to change anything to use it). deep_reload() forces a full | ||||
reload of modules whose code may have changed, which the default | ||||
reload() function does not. | ||||
When deep_reload is off, IPython will use the normal reload(), | ||||
but deep_reload will still be available as dreload(). This | ||||
feature is off by default [which means that you have both | ||||
normal reload() and dreload()]. | ||||
-editor <name> | ||||
Which editor to use with the %edit command. By default, | ||||
IPython will honor your EDITOR environment variable (if not | ||||
set, vi is the Unix default and notepad the Windows one). | ||||
Since this editor is invoked on the fly by IPython and is | ||||
meant for editing small code snippets, you may want to use a | ||||
small, lightweight editor here (in case your default EDITOR is | ||||
something like Emacs). | ||||
-ipythondir <name> | ||||
Brian Granger
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r2322 | name of your IPython configuration directory IPYTHON_DIR. This | ||
Brian E Granger
|
r1258 | can also be specified through the environment variable | ||
Brian Granger
|
r2322 | IPYTHON_DIR. | ||
Brian E Granger
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r1258 | |||
-log, l | ||||
generate a log file of all input. The file is named | ||||
ipython_log.py in your current directory (which prevents logs | ||||
from multiple IPython sessions from trampling each other). You | ||||
can use this to later restore a session by loading your | ||||
logfile as a file to be executed with option -logplay (see | ||||
below). | ||||
-logfile, lf <name> specify the name of your logfile. | ||||
-logplay, lp <name> | ||||
you can replay a previous log. For restoring a session as close as | ||||
possible to the state you left it in, use this option (don't just run | ||||
the logfile). With -logplay, IPython will try to reconstruct the | ||||
previous working environment in full, not just execute the commands in | ||||
the logfile. | ||||
When a session is restored, logging is automatically turned on | ||||
again with the name of the logfile it was invoked with (it is | ||||
read from the log header). So once you've turned logging on for | ||||
a session, you can quit IPython and reload it as many times as | ||||
you want and it will continue to log its history and restore | ||||
from the beginning every time. | ||||
Caveats: there are limitations in this option. The history | ||||
variables _i*,_* and _dh don't get restored properly. In the | ||||
future we will try to implement full session saving by writing | ||||
and retrieving a 'snapshot' of the memory state of IPython. But | ||||
our first attempts failed because of inherent limitations of | ||||
Python's Pickle module, so this may have to wait. | ||||
-[no]messages | ||||
Print messages which IPython collects about its startup | ||||
process (default on). | ||||
-[no]pdb | ||||
Automatically call the pdb debugger after every uncaught | ||||
exception. If you are used to debugging using pdb, this puts | ||||
you automatically inside of it after any call (either in | ||||
IPython or in code called by it) which triggers an exception | ||||
which goes uncaught. | ||||
-pydb | ||||
Makes IPython use the third party "pydb" package as debugger, | ||||
instead of pdb. Requires that pydb is installed. | ||||
-[no]pprint | ||||
ipython can optionally use the pprint (pretty printer) module | ||||
for displaying results. pprint tends to give a nicer display | ||||
of nested data structures. If you like it, you can turn it on | ||||
permanently in your config file (default off). | ||||
-profile, p <name> | ||||
assume that your config file is ipythonrc-<name> or | ||||
ipy_profile_<name>.py (looks in current dir first, then in | ||||
Brian Granger
|
r2322 | IPYTHON_DIR). This is a quick way to keep and load multiple | ||
Brian E Granger
|
r1258 | config files for different tasks, especially if you use the | ||
include option of config files. You can keep a basic | ||||
Brian Granger
|
r2322 | IPYTHON_DIR/ipythonrc file and then have other 'profiles' which | ||
Brian E Granger
|
r1258 | include this one and load extra things for particular | ||
tasks. For example: | ||||
1. $HOME/.ipython/ipythonrc : load basic things you always want. | ||||
2. $HOME/.ipython/ipythonrc-math : load (1) and basic math-related modules. | ||||
3. $HOME/.ipython/ipythonrc-numeric : load (1) and Numeric and plotting modules. | ||||
Since it is possible to create an endless loop by having | ||||
circular file inclusions, IPython will stop if it reaches 15 | ||||
recursive inclusions. | ||||
-prompt_in1, pi1 <string> | ||||
Fernando Perez
|
r1695 | |||
Specify the string used for input prompts. Note that if you are using | ||||
numbered prompts, the number is represented with a '\#' in the | ||||
string. Don't forget to quote strings with spaces embedded in | ||||
them. Default: 'In [\#]:'. The :ref:`prompts section <prompts>` | ||||
discusses in detail all the available escapes to customize your | ||||
prompts. | ||||
Brian E Granger
|
r1258 | |||
-prompt_in2, pi2 <string> | ||||
Similar to the previous option, but used for the continuation | ||||
prompts. The special sequence '\D' is similar to '\#', but | ||||
with all digits replaced dots (so you can have your | ||||
continuation prompt aligned with your input prompt). Default: | ||||
' .\D.:' (note three spaces at the start for alignment with | ||||
'In [\#]'). | ||||
-prompt_out,po <string> | ||||
String used for output prompts, also uses numbers like | ||||
prompt_in1. Default: 'Out[\#]:' | ||||
-quick start in bare bones mode (no config file loaded). | ||||
-rcfile <name> | ||||
name of your IPython resource configuration file. Normally | ||||
IPython loads ipythonrc (from current directory) or | ||||
Brian Granger
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r2322 | IPYTHON_DIR/ipythonrc. | ||
Brian E Granger
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r1258 | |||
If the loading of your config file fails, IPython starts with | ||||
a bare bones configuration (no modules loaded at all). | ||||
-[no]readline | ||||
use the readline library, which is needed to support name | ||||
completion and command history, among other things. It is | ||||
enabled by default, but may cause problems for users of | ||||
X/Emacs in Python comint or shell buffers. | ||||
Note that X/Emacs 'eterm' buffers (opened with M-x term) support | ||||
IPython's readline and syntax coloring fine, only 'emacs' (M-x | ||||
shell and C-c !) buffers do not. | ||||
-screen_length, sl <n> | ||||
number of lines of your screen. This is used to control | ||||
printing of very long strings. Strings longer than this number | ||||
of lines will be sent through a pager instead of directly | ||||
printed. | ||||
The default value for this is 0, which means IPython will | ||||
auto-detect your screen size every time it needs to print certain | ||||
potentially long strings (this doesn't change the behavior of the | ||||
'print' keyword, it's only triggered internally). If for some | ||||
reason this isn't working well (it needs curses support), specify | ||||
it yourself. Otherwise don't change the default. | ||||
-separate_in, si <string> | ||||
separator before input prompts. | ||||
Default: '\n' | ||||
-separate_out, so <string> | ||||
separator before output prompts. | ||||
Default: nothing. | ||||
-separate_out2, so2 | ||||
separator after output prompts. | ||||
Default: nothing. | ||||
For these three options, use the value 0 to specify no separator. | ||||
-nosep | ||||
shorthand for '-SeparateIn 0 -SeparateOut 0 -SeparateOut2 | ||||
0'. Simply removes all input/output separators. | ||||
-upgrade | ||||
Brian Granger
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r2322 | allows you to upgrade your IPYTHON_DIR configuration when you | ||
Brian E Granger
|
r1258 | install a new version of IPython. Since new versions may | ||
include new command line options or example files, this copies | ||||
updated ipythonrc-type files. However, it backs up (with a | ||||
.old extension) all files which it overwrites so that you can | ||||
merge back any customizations you might have in your personal | ||||
files. Note that you should probably use %upgrade instead, | ||||
it's a safer alternative. | ||||
-Version print version information and exit. | ||||
-wxversion <string> | ||||
Brian Granger
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r2197 | Deprecated. | ||
Brian E Granger
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r1258 | |||
-xmode <modename> | ||||
Mode for exception reporting. | ||||
Valid modes: Plain, Context and Verbose. | ||||
* Plain: similar to python's normal traceback printing. | ||||
* Context: prints 5 lines of context source code around each | ||||
line in the traceback. | ||||
* Verbose: similar to Context, but additionally prints the | ||||
variables currently visible where the exception happened | ||||
(shortening their strings if too long). This can potentially be | ||||
very slow, if you happen to have a huge data structure whose | ||||
string representation is complex to compute. Your computer may | ||||
appear to freeze for a while with cpu usage at 100%. If this | ||||
occurs, you can cancel the traceback with Ctrl-C (maybe hitting it | ||||
more than once). | ||||
Interactive use | ||||
=============== | ||||
Warning: IPython relies on the existence of a global variable called | ||||
_ip which controls the shell itself. If you redefine _ip to anything, | ||||
bizarre behavior will quickly occur. | ||||
Other than the above warning, IPython is meant to work as a drop-in | ||||
replacement for the standard interactive interpreter. As such, any code | ||||
which is valid python should execute normally under IPython (cases where | ||||
this is not true should be reported as bugs). It does, however, offer | ||||
many features which are not available at a standard python prompt. What | ||||
follows is a list of these. | ||||
Caution for Windows users | ||||
------------------------- | ||||
Windows, unfortunately, uses the '\' character as a path | ||||
separator. This is a terrible choice, because '\' also represents the | ||||
escape character in most modern programming languages, including | ||||
Python. For this reason, using '/' character is recommended if you | ||||
have problems with ``\``. However, in Windows commands '/' flags | ||||
options, so you can not use it for the root directory. This means that | ||||
paths beginning at the root must be typed in a contrived manner like: | ||||
``%copy \opt/foo/bar.txt \tmp`` | ||||
.. _magic: | ||||
Magic command system | ||||
-------------------- | ||||
IPython will treat any line whose first character is a % as a special | ||||
call to a 'magic' function. These allow you to control the behavior of | ||||
IPython itself, plus a lot of system-type features. They are all | ||||
prefixed with a % character, but parameters are given without | ||||
parentheses or quotes. | ||||
Example: typing '%cd mydir' (without the quotes) changes you working | ||||
directory to 'mydir', if it exists. | ||||
If you have 'automagic' enabled (in your ipythonrc file, via the command | ||||
line option -automagic or with the %automagic function), you don't need | ||||
to type in the % explicitly. IPython will scan its internal list of | ||||
magic functions and call one if it exists. With automagic on you can | ||||
then just type 'cd mydir' to go to directory 'mydir'. The automagic | ||||
system has the lowest possible precedence in name searches, so defining | ||||
an identifier with the same name as an existing magic function will | ||||
shadow it for automagic use. You can still access the shadowed magic | ||||
function by explicitly using the % character at the beginning of the line. | ||||
An example (with automagic on) should clarify all this:: | ||||
In [1]: cd ipython # %cd is called by automagic | ||||
/home/fperez/ipython | ||||
In [2]: cd=1 # now cd is just a variable | ||||
In [3]: cd .. # and doesn't work as a function anymore | ||||
------------------------------ | ||||
File "<console>", line 1 | ||||
cd .. | ||||
^ | ||||
SyntaxError: invalid syntax | ||||
In [4]: %cd .. # but %cd always works | ||||
/home/fperez | ||||
In [5]: del cd # if you remove the cd variable | ||||
In [6]: cd ipython # automagic can work again | ||||
/home/fperez/ipython | ||||
You can define your own magic functions to extend the system. The | ||||
following example defines a new magic command, %impall:: | ||||
import IPython.ipapi | ||||
ip = IPython.ipapi.get() | ||||
def doimp(self, arg): | ||||
ip = self.api | ||||
ip.ex("import %s; reload(%s); from %s import *" % ( | ||||
arg,arg,arg) | ||||
) | ||||
ip.expose_magic('impall', doimp) | ||||
You can also define your own aliased names for magic functions. In your | ||||
Fernando Perez
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r1850 | ipythonrc file, placing a line like:: | ||
Brian E Granger
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r1258 | |||
Fernando Perez
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r1850 | execute __IP.magic_cl = __IP.magic_clear | ||
Brian E Granger
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r1258 | |||
will define %cl as a new name for %clear. | ||||
Type %magic for more information, including a list of all available | ||||
magic functions at any time and their docstrings. You can also type | ||||
%magic_function_name? (see sec. 6.4 <#sec:dyn-object-info> for | ||||
information on the '?' system) to get information about any particular | ||||
magic function you are interested in. | ||||
Fernando Perez
|
r1850 | The API documentation for the :mod:`IPython.Magic` module contains the full | ||
docstrings of all currently available magic commands. | ||||
Brian E Granger
|
r1258 | |||
Access to the standard Python help | ||||
---------------------------------- | ||||
Fernando Perez
|
r1695 | As of Python 2.1, a help system is available with access to object docstrings | ||
and the Python manuals. Simply type 'help' (no quotes) to access it. You can | ||||
also type help(object) to obtain information about a given object, and | ||||
help('keyword') for information on a keyword. As noted :ref:`here | ||||
<accessing_help>`, you need to properly configure your environment variable | ||||
PYTHONDOCS for this feature to work correctly. | ||||
Brian E Granger
|
r1258 | |||
Fernando Perez
|
r1695 | .. _dynamic_object_info: | ||
Brian E Granger
|
r1258 | |||
Dynamic object information | ||||
-------------------------- | ||||
Typing ?word or word? prints detailed information about an object. If | ||||
certain strings in the object are too long (docstrings, code, etc.) they | ||||
get snipped in the center for brevity. This system gives access variable | ||||
types and values, full source code for any object (if available), | ||||
function prototypes and other useful information. | ||||
Typing ??word or word?? gives access to the full information without | ||||
snipping long strings. Long strings are sent to the screen through the | ||||
less pager if longer than the screen and printed otherwise. On systems | ||||
lacking the less command, IPython uses a very basic internal pager. | ||||
The following magic functions are particularly useful for gathering | ||||
information about your working environment. You can get more details by | ||||
typing %magic or querying them individually (use %function_name? with or | ||||
without the %), this is just a summary: | ||||
* **%pdoc <object>**: Print (or run through a pager if too long) the | ||||
docstring for an object. If the given object is a class, it will | ||||
print both the class and the constructor docstrings. | ||||
* **%pdef <object>**: Print the definition header for any callable | ||||
object. If the object is a class, print the constructor information. | ||||
* **%psource <object>**: Print (or run through a pager if too long) | ||||
the source code for an object. | ||||
* **%pfile <object>**: Show the entire source file where an object was | ||||
defined via a pager, opening it at the line where the object | ||||
definition begins. | ||||
* **%who/%whos**: These functions give information about identifiers | ||||
you have defined interactively (not things you loaded or defined | ||||
in your configuration files). %who just prints a list of | ||||
identifiers and %whos prints a table with some basic details about | ||||
each identifier. | ||||
Note that the dynamic object information functions (?/??, %pdoc, %pfile, | ||||
%pdef, %psource) give you access to documentation even on things which | ||||
are not really defined as separate identifiers. Try for example typing | ||||
{}.get? or after doing import os, type os.path.abspath??. | ||||
Fernando Perez
|
r1695 | .. _readline: | ||
Brian E Granger
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r1258 | |||
Readline-based features | ||||
----------------------- | ||||
These features require the GNU readline library, so they won't work if | ||||
your Python installation lacks readline support. We will first describe | ||||
the default behavior IPython uses, and then how to change it to suit | ||||
your preferences. | ||||
Command line completion | ||||
+++++++++++++++++++++++ | ||||
At any time, hitting TAB will complete any available python commands or | ||||
variable names, and show you a list of the possible completions if | ||||
there's no unambiguous one. It will also complete filenames in the | ||||
current directory if no python names match what you've typed so far. | ||||
Search command history | ||||
++++++++++++++++++++++ | ||||
IPython provides two ways for searching through previous input and thus | ||||
reduce the need for repetitive typing: | ||||
1. Start typing, and then use Ctrl-p (previous,up) and Ctrl-n | ||||
(next,down) to search through only the history items that match | ||||
what you've typed so far. If you use Ctrl-p/Ctrl-n at a blank | ||||
prompt, they just behave like normal arrow keys. | ||||
2. Hit Ctrl-r: opens a search prompt. Begin typing and the system | ||||
searches your history for lines that contain what you've typed so | ||||
far, completing as much as it can. | ||||
Persistent command history across sessions | ||||
++++++++++++++++++++++++++++++++++++++++++ | ||||
IPython will save your input history when it leaves and reload it next | ||||
time you restart it. By default, the history file is named | ||||
Brian Granger
|
r2322 | $IPYTHON_DIR/history, but if you've loaded a named profile, | ||
Brian E Granger
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r1258 | '-PROFILE_NAME' is appended to the name. This allows you to keep | ||
separate histories related to various tasks: commands related to | ||||
numerical work will not be clobbered by a system shell history, for | ||||
example. | ||||
Autoindent | ||||
++++++++++ | ||||
IPython can recognize lines ending in ':' and indent the next line, | ||||
while also un-indenting automatically after 'raise' or 'return'. | ||||
This feature uses the readline library, so it will honor your ~/.inputrc | ||||
configuration (or whatever file your INPUTRC variable points to). Adding | ||||
the following lines to your .inputrc file can make indenting/unindenting | ||||
more convenient (M-i indents, M-u unindents):: | ||||
$if Python | ||||
"\M-i": " " | ||||
"\M-u": "\d\d\d\d" | ||||
$endif | ||||
Note that there are 4 spaces between the quote marks after "M-i" above. | ||||
Warning: this feature is ON by default, but it can cause problems with | ||||
the pasting of multi-line indented code (the pasted code gets | ||||
re-indented on each line). A magic function %autoindent allows you to | ||||
toggle it on/off at runtime. You can also disable it permanently on in | ||||
your ipythonrc file (set autoindent 0). | ||||
Customizing readline behavior | ||||
+++++++++++++++++++++++++++++ | ||||
All these features are based on the GNU readline library, which has an | ||||
extremely customizable interface. Normally, readline is configured via a | ||||
file which defines the behavior of the library; the details of the | ||||
syntax for this can be found in the readline documentation available | ||||
with your system or on the Internet. IPython doesn't read this file (if | ||||
it exists) directly, but it does support passing to readline valid | ||||
options via a simple interface. In brief, you can customize readline by | ||||
setting the following options in your ipythonrc configuration file (note | ||||
that these options can not be specified at the command line): | ||||
* **readline_parse_and_bind**: this option can appear as many times as | ||||
you want, each time defining a string to be executed via a | ||||
readline.parse_and_bind() command. The syntax for valid commands | ||||
of this kind can be found by reading the documentation for the GNU | ||||
readline library, as these commands are of the kind which readline | ||||
accepts in its configuration file. | ||||
* **readline_remove_delims**: a string of characters to be removed | ||||
from the default word-delimiters list used by readline, so that | ||||
completions may be performed on strings which contain them. Do not | ||||
change the default value unless you know what you're doing. | ||||
* **readline_omit__names**: when tab-completion is enabled, hitting | ||||
<tab> after a '.' in a name will complete all attributes of an | ||||
object, including all the special methods whose names include | ||||
double underscores (like __getitem__ or __class__). If you'd | ||||
rather not see these names by default, you can set this option to | ||||
1. Note that even when this option is set, you can still see those | ||||
names by explicitly typing a _ after the period and hitting <tab>: | ||||
'name._<tab>' will always complete attribute names starting with '_'. | ||||
This option is off by default so that new users see all | ||||
attributes of any objects they are dealing with. | ||||
You will find the default values along with a corresponding detailed | ||||
explanation in your ipythonrc file. | ||||
Session logging and restoring | ||||
----------------------------- | ||||
Fernando Perez
|
r1695 | You can log all input from a session either by starting IPython with the | ||
command line switches -log or -logfile (see :ref:`here <command_line_options>`) | ||||
or by activating the logging at any moment with the magic function %logstart. | ||||
Brian E Granger
|
r1258 | |||
Log files can later be reloaded with the -logplay option and IPython | ||||
will attempt to 'replay' the log by executing all the lines in it, thus | ||||
restoring the state of a previous session. This feature is not quite | ||||
perfect, but can still be useful in many cases. | ||||
The log files can also be used as a way to have a permanent record of | ||||
any code you wrote while experimenting. Log files are regular text files | ||||
which you can later open in your favorite text editor to extract code or | ||||
to 'clean them up' before using them to replay a session. | ||||
The %logstart function for activating logging in mid-session is used as | ||||
follows: | ||||
%logstart [log_name [log_mode]] | ||||
If no name is given, it defaults to a file named 'log' in your | ||||
Brian Granger
|
r2322 | IPYTHON_DIR directory, in 'rotate' mode (see below). | ||
Brian E Granger
|
r1258 | |||
'%logstart name' saves to file 'name' in 'backup' mode. It saves your | ||||
history up to that point and then continues logging. | ||||
%logstart takes a second optional parameter: logging mode. This can be | ||||
one of (note that the modes are given unquoted): | ||||
* [over:] overwrite existing log_name. | ||||
* [backup:] rename (if exists) to log_name~ and start log_name. | ||||
* [append:] well, that says it. | ||||
* [rotate:] create rotating logs log_name.1~, log_name.2~, etc. | ||||
The %logoff and %logon functions allow you to temporarily stop and | ||||
resume logging to a file which had previously been started with | ||||
%logstart. They will fail (with an explanation) if you try to use them | ||||
before logging has been started. | ||||
Fernando Perez
|
r1695 | .. _system_shell_access: | ||
Brian E Granger
|
r1258 | System shell access | ||
------------------- | ||||
Any input line beginning with a ! character is passed verbatim (minus | ||||
the !, of course) to the underlying operating system. For example, | ||||
typing !ls will run 'ls' in the current directory. | ||||
Manual capture of command output | ||||
-------------------------------- | ||||
If the input line begins with two exclamation marks, !!, the command is | ||||
executed but its output is captured and returned as a python list, split | ||||
on newlines. Any output sent by the subprocess to standard error is | ||||
printed separately, so that the resulting list only captures standard | ||||
output. The !! syntax is a shorthand for the %sx magic command. | ||||
Finally, the %sc magic (short for 'shell capture') is similar to %sx, | ||||
but allowing more fine-grained control of the capture details, and | ||||
storing the result directly into a named variable. The direct use of | ||||
%sc is now deprecated, and you should ise the ``var = !cmd`` syntax | ||||
instead. | ||||
IPython also allows you to expand the value of python variables when | ||||
making system calls. Any python variable or expression which you prepend | ||||
with $ will get expanded before the system call is made:: | ||||
In [1]: pyvar='Hello world' | ||||
In [2]: !echo "A python variable: $pyvar" | ||||
A python variable: Hello world | ||||
If you want the shell to actually see a literal $, you need to type it | ||||
twice:: | ||||
In [3]: !echo "A system variable: $$HOME" | ||||
A system variable: /home/fperez | ||||
You can pass arbitrary expressions, though you'll need to delimit them | ||||
with {} if there is ambiguity as to the extent of the expression:: | ||||
In [5]: x=10 | ||||
In [6]: y=20 | ||||
In [13]: !echo $x+y | ||||
10+y | ||||
In [7]: !echo ${x+y} | ||||
30 | ||||
Even object attributes can be expanded:: | ||||
In [12]: !echo $sys.argv | ||||
[/home/fperez/usr/bin/ipython] | ||||
System command aliases | ||||
---------------------- | ||||
The %alias magic function and the alias option in the ipythonrc | ||||
configuration file allow you to define magic functions which are in fact | ||||
system shell commands. These aliases can have parameters. | ||||
'%alias alias_name cmd' defines 'alias_name' as an alias for 'cmd' | ||||
Then, typing '%alias_name params' will execute the system command 'cmd | ||||
params' (from your underlying operating system). | ||||
You can also define aliases with parameters using %s specifiers (one per | ||||
parameter). The following example defines the %parts function as an | ||||
alias to the command 'echo first %s second %s' where each %s will be | ||||
replaced by a positional parameter to the call to %parts:: | ||||
In [1]: alias parts echo first %s second %s | ||||
In [2]: %parts A B | ||||
first A second B | ||||
In [3]: %parts A | ||||
Incorrect number of arguments: 2 expected. | ||||
parts is an alias to: 'echo first %s second %s' | ||||
If called with no parameters, %alias prints the table of currently | ||||
defined aliases. | ||||
The %rehash/rehashx magics allow you to load your entire $PATH as | ||||
ipython aliases. See their respective docstrings (or sec. 6.2 | ||||
<#sec:magic> for further details). | ||||
.. _dreload: | ||||
Recursive reload | ||||
---------------- | ||||
The dreload function does a recursive reload of a module: changes made | ||||
to the module since you imported will actually be available without | ||||
having to exit. | ||||
Verbose and colored exception traceback printouts | ||||
------------------------------------------------- | ||||
IPython provides the option to see very detailed exception tracebacks, | ||||
which can be especially useful when debugging large programs. You can | ||||
run any Python file with the %run function to benefit from these | ||||
detailed tracebacks. Furthermore, both normal and verbose tracebacks can | ||||
be colored (if your terminal supports it) which makes them much easier | ||||
to parse visually. | ||||
See the magic xmode and colors functions for details (just type %magic). | ||||
These features are basically a terminal version of Ka-Ping Yee's cgitb | ||||
module, now part of the standard Python library. | ||||
Fernando Perez
|
r1695 | .. _input_caching: | ||
Brian E Granger
|
r1258 | |||
Input caching system | ||||
-------------------- | ||||
Ville M. Vainio
|
r1768 | IPython offers numbered prompts (In/Out) with input and output caching | ||
(also referred to as 'input history'). All input is saved and can be | ||||
retrieved as variables (besides the usual arrow key recall), in | ||||
addition to the %rep magic command that brings a history entry | ||||
up for editing on the next command line. | ||||
Brian E Granger
|
r1258 | |||
The following GLOBAL variables always exist (so don't overwrite them!): | ||||
_i: stores previous input. _ii: next previous. _iii: next-next previous. | ||||
_ih : a list of all input _ih[n] is the input from line n and this list | ||||
is aliased to the global variable In. If you overwrite In with a | ||||
variable of your own, you can remake the assignment to the internal list | ||||
with a simple 'In=_ih'. | ||||
Additionally, global variables named _i<n> are dynamically created (<n> | ||||
being the prompt counter), such that | ||||
_i<n> == _ih[<n>] == In[<n>]. | ||||
For example, what you typed at prompt 14 is available as _i14, _ih[14] | ||||
and In[14]. | ||||
This allows you to easily cut and paste multi line interactive prompts | ||||
by printing them out: they print like a clean string, without prompt | ||||
characters. You can also manipulate them like regular variables (they | ||||
are strings), modify or exec them (typing 'exec _i9' will re-execute the | ||||
contents of input prompt 9, 'exec In[9:14]+In[18]' will re-execute lines | ||||
9 through 13 and line 18). | ||||
You can also re-execute multiple lines of input easily by using the | ||||
magic %macro function (which automates the process and allows | ||||
re-execution without having to type 'exec' every time). The macro system | ||||
also allows you to re-execute previous lines which include magic | ||||
function calls (which require special processing). Type %macro? or see | ||||
sec. 6.2 <#sec:magic> for more details on the macro system. | ||||
A history function %hist allows you to see any part of your input | ||||
history by printing a range of the _i variables. | ||||
Ville M. Vainio
|
r1768 | You can also search ('grep') through your history by typing | ||
Ville M. Vainio
|
r1781 | '%hist -g somestring'. This also searches through the so called *shadow history*, | ||
Ville M. Vainio
|
r1768 | which remembers all the commands (apart from multiline code blocks) | ||
you have ever entered. Handy for searching for svn/bzr URL's, IP adrresses | ||||
etc. You can bring shadow history entries listed by '%hist -g' up for editing | ||||
(or re-execution by just pressing ENTER) with %rep command. Shadow history | ||||
entries are not available as _iNUMBER variables, and they are identified by | ||||
the '0' prefix in %hist -g output. That is, history entry 12 is a normal | ||||
history entry, but 0231 is a shadow history entry. | ||||
Ville M. Vainio
|
r1781 | Shadow history was added because the readline history is inherently very | ||
unsafe - if you have multiple IPython sessions open, the last session | ||||
to close will overwrite the history of previountly closed session. Likewise, | ||||
if a crash occurs, history is never saved, whereas shadow history entries | ||||
are added after entering every command (so a command executed | ||||
in another IPython session is immediately available in other IPython | ||||
sessions that are open). | ||||
To conserve space, a command can exist in shadow history only once - it doesn't | ||||
make sense to store a common line like "cd .." a thousand times. The idea is | ||||
mainly to provide a reliable place where valuable, hard-to-remember commands can | ||||
always be retrieved, as opposed to providing an exact sequence of commands | ||||
you have entered in actual order. | ||||
Because shadow history has all the commands you have ever executed, | ||||
time taken by %hist -g will increase oven time. If it ever starts to take | ||||
too long (or it ends up containing sensitive information like passwords), | ||||
clear the shadow history by `%clear shadow_nuke`. | ||||
Time taken to add entries to shadow history should be negligible, but | ||||
in any case, if you start noticing performance degradation after using | ||||
IPython for a long time (or running a script that floods the shadow history!), | ||||
you can 'compress' the shadow history by executing | ||||
`%clear shadow_compress`. In practice, this should never be necessary | ||||
in normal use. | ||||
Fernando Perez
|
r1695 | .. _output_caching: | ||
Brian E Granger
|
r1258 | |||
Output caching system | ||||
--------------------- | ||||
For output that is returned from actions, a system similar to the input | ||||
cache exists but using _ instead of _i. Only actions that produce a | ||||
result (NOT assignments, for example) are cached. If you are familiar | ||||
with Mathematica, IPython's _ variables behave exactly like | ||||
Mathematica's % variables. | ||||
The following GLOBAL variables always exist (so don't overwrite them!): | ||||
* [_] (a single underscore) : stores previous output, like Python's | ||||
default interpreter. | ||||
* [__] (two underscores): next previous. | ||||
* [___] (three underscores): next-next previous. | ||||
Additionally, global variables named _<n> are dynamically created (<n> | ||||
being the prompt counter), such that the result of output <n> is always | ||||
available as _<n> (don't use the angle brackets, just the number, e.g. | ||||
_21). | ||||
These global variables are all stored in a global dictionary (not a | ||||
list, since it only has entries for lines which returned a result) | ||||
available under the names _oh and Out (similar to _ih and In). So the | ||||
output from line 12 can be obtained as _12, Out[12] or _oh[12]. If you | ||||
accidentally overwrite the Out variable you can recover it by typing | ||||
'Out=_oh' at the prompt. | ||||
This system obviously can potentially put heavy memory demands on your | ||||
system, since it prevents Python's garbage collector from removing any | ||||
previously computed results. You can control how many results are kept | ||||
in memory with the option (at the command line or in your ipythonrc | ||||
file) cache_size. If you set it to 0, the whole system is completely | ||||
disabled and the prompts revert to the classic '>>>' of normal Python. | ||||
Directory history | ||||
----------------- | ||||
Your history of visited directories is kept in the global list _dh, and | ||||
the magic %cd command can be used to go to any entry in that list. The | ||||
Ville M. Vainio
|
r1768 | %dhist command allows you to view this history. Do ``cd -<TAB`` to | ||
Brian E Granger
|
r1258 | conventiently view the directory history. | ||
Automatic parentheses and quotes | ||||
-------------------------------- | ||||
These features were adapted from Nathan Gray's LazyPython. They are | ||||
meant to allow less typing for common situations. | ||||
Automatic parentheses | ||||
--------------------- | ||||
Callable objects (i.e. functions, methods, etc) can be invoked like this | ||||
(notice the commas between the arguments):: | ||||
>>> callable_ob arg1, arg2, arg3 | ||||
and the input will be translated to this:: | ||||
-> callable_ob(arg1, arg2, arg3) | ||||
You can force automatic parentheses by using '/' as the first character | ||||
of a line. For example:: | ||||
>>> /globals # becomes 'globals()' | ||||
Note that the '/' MUST be the first character on the line! This won't work:: | ||||
>>> print /globals # syntax error | ||||
In most cases the automatic algorithm should work, so you should rarely | ||||
need to explicitly invoke /. One notable exception is if you are trying | ||||
to call a function with a list of tuples as arguments (the parenthesis | ||||
will confuse IPython):: | ||||
In [1]: zip (1,2,3),(4,5,6) # won't work | ||||
but this will work:: | ||||
In [2]: /zip (1,2,3),(4,5,6) | ||||
---> zip ((1,2,3),(4,5,6)) | ||||
Out[2]= [(1, 4), (2, 5), (3, 6)] | ||||
IPython tells you that it has altered your command line by displaying | ||||
the new command line preceded by ->. e.g.:: | ||||
In [18]: callable list | ||||
----> callable (list) | ||||
Automatic quoting | ||||
----------------- | ||||
You can force automatic quoting of a function's arguments by using ',' | ||||
or ';' as the first character of a line. For example:: | ||||
>>> ,my_function /home/me # becomes my_function("/home/me") | ||||
If you use ';' instead, the whole argument is quoted as a single string | ||||
(while ',' splits on whitespace):: | ||||
>>> ,my_function a b c # becomes my_function("a","b","c") | ||||
>>> ;my_function a b c # becomes my_function("a b c") | ||||
Note that the ',' or ';' MUST be the first character on the line! This | ||||
won't work:: | ||||
>>> x = ,my_function /home/me # syntax error | ||||
IPython as your default Python environment | ||||
========================================== | ||||
Python honors the environment variable PYTHONSTARTUP and will execute at | ||||
startup the file referenced by this variable. If you put at the end of | ||||
this file the following two lines of code:: | ||||
import IPython | ||||
IPython.Shell.IPShell().mainloop(sys_exit=1) | ||||
then IPython will be your working environment anytime you start Python. | ||||
The sys_exit=1 is needed to have IPython issue a call to sys.exit() when | ||||
it finishes, otherwise you'll be back at the normal Python '>>>' | ||||
prompt. | ||||
This is probably useful to developers who manage multiple Python | ||||
versions and don't want to have correspondingly multiple IPython | ||||
versions. Note that in this mode, there is no way to pass IPython any | ||||
command-line options, as those are trapped first by Python itself. | ||||
.. _Embedding: | ||||
Embedding IPython | ||||
================= | ||||
It is possible to start an IPython instance inside your own Python | ||||
programs. This allows you to evaluate dynamically the state of your | ||||
code, operate with your variables, analyze them, etc. Note however that | ||||
any changes you make to values while in the shell do not propagate back | ||||
to the running code, so it is safe to modify your values because you | ||||
won't break your code in bizarre ways by doing so. | ||||
This feature allows you to easily have a fully functional python | ||||
environment for doing object introspection anywhere in your code with a | ||||
simple function call. In some cases a simple print statement is enough, | ||||
but if you need to do more detailed analysis of a code fragment this | ||||
feature can be very valuable. | ||||
It can also be useful in scientific computing situations where it is | ||||
common to need to do some automatic, computationally intensive part and | ||||
then stop to look at data, plots, etc. | ||||
Opening an IPython instance will give you full access to your data and | ||||
functions, and you can resume program execution once you are done with | ||||
the interactive part (perhaps to stop again later, as many times as | ||||
needed). | ||||
The following code snippet is the bare minimum you need to include in | ||||
your Python programs for this to work (detailed examples follow later):: | ||||
from IPython.Shell import IPShellEmbed | ||||
ipshell = IPShellEmbed() | ||||
ipshell() # this call anywhere in your program will start IPython | ||||
You can run embedded instances even in code which is itself being run at | ||||
the IPython interactive prompt with '%run <filename>'. Since it's easy | ||||
to get lost as to where you are (in your top-level IPython or in your | ||||
embedded one), it's a good idea in such cases to set the in/out prompts | ||||
to something different for the embedded instances. The code examples | ||||
below illustrate this. | ||||
You can also have multiple IPython instances in your program and open | ||||
them separately, for example with different options for data | ||||
presentation. If you close and open the same instance multiple times, | ||||
its prompt counters simply continue from each execution to the next. | ||||
Please look at the docstrings in the Shell.py module for more details on | ||||
the use of this system. | ||||
The following sample file illustrating how to use the embedding | ||||
functionality is provided in the examples directory as example-embed.py. | ||||
It should be fairly self-explanatory:: | ||||
#!/usr/bin/env python | ||||
"""An example of how to embed an IPython shell into a running program. | ||||
Please see the documentation in the IPython.Shell module for more details. | ||||
The accompanying file example-embed-short.py has quick code fragments for | ||||
embedding which you can cut and paste in your code once you understand how | ||||
things work. | ||||
The code in this file is deliberately extra-verbose, meant for learning.""" | ||||
# The basics to get you going: | ||||
# IPython sets the __IPYTHON__ variable so you can know if you have nested | ||||
# copies running. | ||||
# Try running this code both at the command line and from inside IPython (with | ||||
# %run example-embed.py) | ||||
try: | ||||
__IPYTHON__ | ||||
except NameError: | ||||
nested = 0 | ||||
args = [''] | ||||
else: | ||||
print "Running nested copies of IPython." | ||||
print "The prompts for the nested copy have been modified" | ||||
nested = 1 | ||||
# what the embedded instance will see as sys.argv: | ||||
args = ['-pi1','In <\\#>: ','-pi2',' .\\D.: ', | ||||
'-po','Out<\\#>: ','-nosep'] | ||||
# First import the embeddable shell class | ||||
from IPython.Shell import IPShellEmbed | ||||
# Now create an instance of the embeddable shell. The first argument is a | ||||
# string with options exactly as you would type them if you were starting | ||||
# IPython at the system command line. Any parameters you want to define for | ||||
# configuration can thus be specified here. | ||||
ipshell = IPShellEmbed(args, | ||||
banner = 'Dropping into IPython', | ||||
exit_msg = 'Leaving Interpreter, back to program.') | ||||
# Make a second instance, you can have as many as you want. | ||||
if nested: | ||||
args[1] = 'In2<\\#>' | ||||
else: | ||||
args = ['-pi1','In2<\\#>: ','-pi2',' .\\D.: ', | ||||
'-po','Out<\\#>: ','-nosep'] | ||||
ipshell2 = IPShellEmbed(args,banner = 'Second IPython instance.') | ||||
print '\nHello. This is printed from the main controller program.\n' | ||||
# You can then call ipshell() anywhere you need it (with an optional | ||||
# message): | ||||
ipshell('***Called from top level. ' | ||||
'Hit Ctrl-D to exit interpreter and continue program.\n' | ||||
'Note that if you use %kill_embedded, you can fully deactivate\n' | ||||
'This embedded instance so it will never turn on again') | ||||
print '\nBack in caller program, moving along...\n' | ||||
#--------------------------------------------------------------------------- | ||||
# More details: | ||||
# IPShellEmbed instances don't print the standard system banner and | ||||
# messages. The IPython banner (which actually may contain initialization | ||||
# messages) is available as <instance>.IP.BANNER in case you want it. | ||||
# IPShellEmbed instances print the following information everytime they | ||||
# start: | ||||
# - A global startup banner. | ||||
# - A call-specific header string, which you can use to indicate where in the | ||||
# execution flow the shell is starting. | ||||
# They also print an exit message every time they exit. | ||||
# Both the startup banner and the exit message default to None, and can be set | ||||
# either at the instance constructor or at any other time with the | ||||
# set_banner() and set_exit_msg() methods. | ||||
# The shell instance can be also put in 'dummy' mode globally or on a per-call | ||||
# basis. This gives you fine control for debugging without having to change | ||||
# code all over the place. | ||||
# The code below illustrates all this. | ||||
# This is how the global banner and exit_msg can be reset at any point | ||||
ipshell.set_banner('Entering interpreter - New Banner') | ||||
ipshell.set_exit_msg('Leaving interpreter - New exit_msg') | ||||
def foo(m): | ||||
s = 'spam' | ||||
ipshell('***In foo(). Try @whos, or print s or m:') | ||||
print 'foo says m = ',m | ||||
def bar(n): | ||||
s = 'eggs' | ||||
ipshell('***In bar(). Try @whos, or print s or n:') | ||||
print 'bar says n = ',n | ||||
# Some calls to the above functions which will trigger IPython: | ||||
print 'Main program calling foo("eggs")\n' | ||||
foo('eggs') | ||||
# The shell can be put in 'dummy' mode where calls to it silently return. This | ||||
# allows you, for example, to globally turn off debugging for a program with a | ||||
# single call. | ||||
ipshell.set_dummy_mode(1) | ||||
print '\nTrying to call IPython which is now "dummy":' | ||||
ipshell() | ||||
print 'Nothing happened...' | ||||
# The global 'dummy' mode can still be overridden for a single call | ||||
print '\nOverriding dummy mode manually:' | ||||
ipshell(dummy=0) | ||||
# Reactivate the IPython shell | ||||
ipshell.set_dummy_mode(0) | ||||
print 'You can even have multiple embedded instances:' | ||||
ipshell2() | ||||
print '\nMain program calling bar("spam")\n' | ||||
bar('spam') | ||||
print 'Main program finished. Bye!' | ||||
#********************** End of file <example-embed.py> *********************** | ||||
Once you understand how the system functions, you can use the following | ||||
code fragments in your programs which are ready for cut and paste:: | ||||
"""Quick code snippets for embedding IPython into other programs. | ||||
See example-embed.py for full details, this file has the bare minimum code for | ||||
cut and paste use once you understand how to use the system.""" | ||||
#--------------------------------------------------------------------------- | ||||
# This code loads IPython but modifies a few things if it detects it's running | ||||
# embedded in another IPython session (helps avoid confusion) | ||||
try: | ||||
__IPYTHON__ | ||||
except NameError: | ||||
argv = [''] | ||||
banner = exit_msg = '' | ||||
else: | ||||
# Command-line options for IPython (a list like sys.argv) | ||||
argv = ['-pi1','In <\\#>:','-pi2',' .\\D.:','-po','Out<\\#>:'] | ||||
banner = '*** Nested interpreter ***' | ||||
exit_msg = '*** Back in main IPython ***' | ||||
# First import the embeddable shell class | ||||
from IPython.Shell import IPShellEmbed | ||||
# Now create the IPython shell instance. Put ipshell() anywhere in your code | ||||
# where you want it to open. | ||||
ipshell = IPShellEmbed(argv,banner=banner,exit_msg=exit_msg) | ||||
#--------------------------------------------------------------------------- | ||||
# This code will load an embeddable IPython shell always with no changes for | ||||
# nested embededings. | ||||
from IPython.Shell import IPShellEmbed | ||||
ipshell = IPShellEmbed() | ||||
# Now ipshell() will open IPython anywhere in the code. | ||||
#--------------------------------------------------------------------------- | ||||
# This code loads an embeddable shell only if NOT running inside | ||||
# IPython. Inside IPython, the embeddable shell variable ipshell is just a | ||||
# dummy function. | ||||
try: | ||||
__IPYTHON__ | ||||
except NameError: | ||||
from IPython.Shell import IPShellEmbed | ||||
ipshell = IPShellEmbed() | ||||
# Now ipshell() will open IPython anywhere in the code | ||||
else: | ||||
# Define a dummy ipshell() so the same code doesn't crash inside an | ||||
# interactive IPython | ||||
def ipshell(): pass | ||||
#******************* End of file <example-embed-short.py> ******************** | ||||
Using the Python debugger (pdb) | ||||
=============================== | ||||
Running entire programs via pdb | ||||
------------------------------- | ||||
pdb, the Python debugger, is a powerful interactive debugger which | ||||
allows you to step through code, set breakpoints, watch variables, | ||||
etc. IPython makes it very easy to start any script under the control | ||||
of pdb, regardless of whether you have wrapped it into a 'main()' | ||||
function or not. For this, simply type '%run -d myscript' at an | ||||
IPython prompt. See the %run command's documentation (via '%run?' or | ||||
in Sec. magic_ for more details, including how to control where pdb | ||||
will stop execution first. | ||||
For more information on the use of the pdb debugger, read the included | ||||
pdb.doc file (part of the standard Python distribution). On a stock | ||||
Linux system it is located at /usr/lib/python2.3/pdb.doc, but the | ||||
easiest way to read it is by using the help() function of the pdb module | ||||
as follows (in an IPython prompt): | ||||
In [1]: import pdb | ||||
In [2]: pdb.help() | ||||
This will load the pdb.doc document in a file viewer for you automatically. | ||||
Automatic invocation of pdb on exceptions | ||||
----------------------------------------- | ||||
IPython, if started with the -pdb option (or if the option is set in | ||||
your rc file) can call the Python pdb debugger every time your code | ||||
triggers an uncaught exception. This feature | ||||
can also be toggled at any time with the %pdb magic command. This can be | ||||
extremely useful in order to find the origin of subtle bugs, because pdb | ||||
opens up at the point in your code which triggered the exception, and | ||||
while your program is at this point 'dead', all the data is still | ||||
available and you can walk up and down the stack frame and understand | ||||
the origin of the problem. | ||||
Furthermore, you can use these debugging facilities both with the | ||||
embedded IPython mode and without IPython at all. For an embedded shell | ||||
(see sec. Embedding_), simply call the constructor with | ||||
'-pdb' in the argument string and automatically pdb will be called if an | ||||
uncaught exception is triggered by your code. | ||||
For stand-alone use of the feature in your programs which do not use | ||||
IPython at all, put the following lines toward the top of your 'main' | ||||
routine:: | ||||
Brian Granger
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r2124 | import sys | ||
from IPython.core import ultratb | ||||
sys.excepthook = ultratb.FormattedTB(mode='Verbose', | ||||
Brian E Granger
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r1258 | color_scheme='Linux', call_pdb=1) | ||
The mode keyword can be either 'Verbose' or 'Plain', giving either very | ||||
detailed or normal tracebacks respectively. The color_scheme keyword can | ||||
be one of 'NoColor', 'Linux' (default) or 'LightBG'. These are the same | ||||
options which can be set in IPython with -colors and -xmode. | ||||
This will give any of your programs detailed, colored tracebacks with | ||||
automatic invocation of pdb. | ||||
Extensions for syntax processing | ||||
================================ | ||||
This isn't for the faint of heart, because the potential for breaking | ||||
things is quite high. But it can be a very powerful and useful feature. | ||||
In a nutshell, you can redefine the way IPython processes the user input | ||||
line to accept new, special extensions to the syntax without needing to | ||||
change any of IPython's own code. | ||||
Brian Granger
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r2064 | In the IPython/extensions directory you will find some examples | ||
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r1258 | supplied, which we will briefly describe now. These can be used 'as is' | ||
(and both provide very useful functionality), or you can use them as a | ||||
starting point for writing your own extensions. | ||||
Pasting of code starting with '>>> ' or '... ' | ||||
---------------------------------------------- | ||||
In the python tutorial it is common to find code examples which have | ||||
been taken from real python sessions. The problem with those is that all | ||||
the lines begin with either '>>> ' or '... ', which makes it impossible | ||||
to paste them all at once. One must instead do a line by line manual | ||||
copying, carefully removing the leading extraneous characters. | ||||
This extension identifies those starting characters and removes them | ||||
from the input automatically, so that one can paste multi-line examples | ||||
directly into IPython, saving a lot of time. Please look at the file | ||||
Brian Granger
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r2064 | InterpreterPasteInput.py in the IPython/extensions directory for details | ||
Brian E Granger
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r1258 | on how this is done. | ||
IPython comes with a special profile enabling this feature, called | ||||
tutorial. Simply start IPython via 'ipython -p tutorial' and the feature | ||||
will be available. In a normal IPython session you can activate the | ||||
feature by importing the corresponding module with: | ||||
Brian Granger
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r2064 | In [1]: import IPython.extensions.InterpreterPasteInput | ||
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r1258 | |||
The following is a 'screenshot' of how things work when this extension | ||||
is on, copying an example from the standard tutorial:: | ||||
IPython profile: tutorial | ||||
*** Pasting of code with ">>>" or "..." has been enabled. | ||||
In [1]: >>> def fib2(n): # return Fibonacci series up to n | ||||
...: ... """Return a list containing the Fibonacci series up to | ||||
n.""" | ||||
...: ... result = [] | ||||
...: ... a, b = 0, 1 | ||||
...: ... while b < n: | ||||
...: ... result.append(b) # see below | ||||
...: ... a, b = b, a+b | ||||
...: ... return result | ||||
...: | ||||
In [2]: fib2(10) | ||||
Out[2]: [1, 1, 2, 3, 5, 8] | ||||
Note that as currently written, this extension does not recognize | ||||
IPython's prompts for pasting. Those are more complicated, since the | ||||
user can change them very easily, they involve numbers and can vary in | ||||
length. One could however extract all the relevant information from the | ||||
IPython instance and build an appropriate regular expression. This is | ||||
left as an exercise for the reader. | ||||
Input of physical quantities with units | ||||
--------------------------------------- | ||||
The module PhysicalQInput allows a simplified form of input for physical | ||||
quantities with units. This file is meant to be used in conjunction with | ||||
the PhysicalQInteractive module (in the same directory) and | ||||
Physics.PhysicalQuantities from Konrad Hinsen's ScientificPython | ||||
(http://dirac.cnrs-orleans.fr/ScientificPython/). | ||||
The Physics.PhysicalQuantities module defines PhysicalQuantity objects, | ||||
but these must be declared as instances of a class. For example, to | ||||
define v as a velocity of 3 m/s, normally you would write:: | ||||
In [1]: v = PhysicalQuantity(3,'m/s') | ||||
Using the PhysicalQ_Input extension this can be input instead as: | ||||
In [1]: v = 3 m/s | ||||
which is much more convenient for interactive use (even though it is | ||||
blatantly invalid Python syntax). | ||||
The physics profile supplied with IPython (enabled via 'ipython -p | ||||
physics') uses these extensions, which you can also activate with: | ||||
from math import * # math MUST be imported BEFORE PhysicalQInteractive | ||||
Brian Granger
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r2064 | from IPython.extensions.PhysicalQInteractive import * | ||
import IPython.extensions.PhysicalQInput | ||||
Brian E Granger
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r1258 | |||
Brian Granger
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r2197 | .. _gui_support: | ||
Brian E Granger
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r1258 | |||
Brian Granger
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r2197 | GUI event loop support support | ||
============================== | ||||
.. versionadded:: 0.11 | ||||
The ``%gui`` magic and :mod:`IPython.lib.inputhook`. | ||||
IPython has excellent support for working interactively with Graphical User | ||||
Interface (GUI) toolkits, such as wxPython, PyQt4, PyGTK and Tk. This is | ||||
implemented using Python's builtin ``PyOSInputHook`` hook. This implementation | ||||
is extremely robust compared to our previous threaded based version. The | ||||
Brian Granger
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r2235 | advantages of this are: | ||
Brian Granger
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r2197 | |||
* GUIs can be enabled and disabled dynamically at runtime. | ||||
* The active GUI can be switched dynamically at runtime. | ||||
* In some cases, multiple GUIs can run simultaneously with no problems. | ||||
* There is a developer API in :mod:`IPython.lib.inputhook` for customizing | ||||
all of these things. | ||||
For users, enabling GUI event loop integration is simple. You simple use the | ||||
``%gui`` magic as follows:: | ||||
%gui [-a] [GUINAME] | ||||
With no arguments, ``%gui`` removes all GUI support. Valid ``GUINAME`` | ||||
arguments are ``wx``, ``qt4``, ``gtk`` and ``tk``. The ``-a`` option will | ||||
create and return a running application object for the selected GUI toolkit. | ||||
Brian Granger
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r2235 | Thus, to use wxPython interactively and create a running :class:`wx.App` | ||
Brian Granger
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r2197 | object, do:: | ||
%gui -a wx | ||||
For information on IPython's Matplotlib integration (and the ``pylab`` mode) | ||||
see :ref:`this section <matplotlib_support>`. | ||||
Brian E Granger
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r1258 | |||
Brian Granger
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r2197 | For developers that want to use IPython's GUI event loop integration in | ||
Brian Granger
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r2235 | the form of a library, these capabilities are exposed in library form | ||
Brian Granger
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r2197 | in the :mod:`IPython.lib.inputhook`. Interested developers should see the | ||
Brian Granger
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r2235 | module docstrings for more information, but there are a few points that | ||
should be mentioned here. | ||||
First, the ``PyOSInputHook`` approach only works in command line settings | ||||
where readline is activated. | ||||
Second, when using the ``PyOSInputHook`` approach, a GUI application should | ||||
*not* start its event loop. Instead all of this is handled by the | ||||
``PyOSInputHook``. This means that applications that are meant to be used both | ||||
in IPython and as standalone apps need to have special code to detects how the | ||||
application is being run. We highly recommend using IPython's | ||||
:func:`appstart_` functions for this. Here is a simple example that shows the | ||||
recommended code that should be at the bottom of a wxPython using GUI | ||||
application:: | ||||
try: | ||||
from IPython import appstart_wx | ||||
appstart_wx(app) | ||||
except ImportError: | ||||
app.MainLoop() | ||||
This pattern should be used instead of the simple ``app.MainLoop()`` code | ||||
that a standalone wxPython application would have. | ||||
Third, unlike previous versions of IPython, we no longer "hijack" (replace | ||||
them with no-ops) the event loops. This is done to allow applications that | ||||
actually need to run the real event loops to do so. This is often needed to | ||||
process pending events at critical points. | ||||
Finally, we also have a number of examples in our source directory | ||||
Brian Granger
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r2218 | :file:`docs/examples/lib` that demonstrate these capabilities. | ||
Brian Granger
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r2197 | .. _matplotlib_support: | ||
Plotting with matplotlib | ||||
======================== | ||||
`Matplotlib`_ provides high quality 2D and | ||||
3D plotting for Python. Matplotlib can produce plots on screen using a variety | ||||
of GUI toolkits, including Tk, PyGTK, PyQt4 and wxPython. It also provides a | ||||
number of commands useful for scientific computing, all with a syntax | ||||
compatible with that of the popular Matlab program. | ||||
Many IPython users have come to rely on IPython's ``-pylab`` mode which | ||||
automates the integration of Matplotlib with IPython. We are still in the | ||||
process of working with the Matplotlib developers to finalize the new pylab | ||||
API, but for now you can use Matplotlib interactively using the following | ||||
commands:: | ||||
%gui -a wx | ||||
import matplotlib | ||||
matplotlib.use('wxagg') | ||||
from matplotlib import pylab | ||||
pylab.interactive(True) | ||||
All of this will soon be automated as Matplotlib beings to include | ||||
new logic that uses our new GUI support. | ||||
Brian E Granger
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r1258 | |||
Fernando Perez
|
r1695 | .. _interactive_demos: | ||
Brian E Granger
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r1258 | |||
Interactive demos with IPython | ||||
============================== | ||||
IPython ships with a basic system for running scripts interactively in | ||||
sections, useful when presenting code to audiences. A few tags embedded | ||||
in comments (so that the script remains valid Python code) divide a file | ||||
into separate blocks, and the demo can be run one block at a time, with | ||||
IPython printing (with syntax highlighting) the block before executing | ||||
it, and returning to the interactive prompt after each block. The | ||||
interactive namespace is updated after each block is run with the | ||||
contents of the demo's namespace. | ||||
This allows you to show a piece of code, run it and then execute | ||||
interactively commands based on the variables just created. Once you | ||||
want to continue, you simply execute the next block of the demo. The | ||||
following listing shows the markup necessary for dividing a script into | ||||
sections for execution as a demo:: | ||||
"""A simple interactive demo to illustrate the use of IPython's Demo class. | ||||
Any python script can be run as a demo, but that does little more than showing | ||||
it on-screen, syntax-highlighted in one shot. If you add a little simple | ||||
markup, you can stop at specified intervals and return to the ipython prompt, | ||||
resuming execution later. | ||||
""" | ||||
print 'Hello, welcome to an interactive IPython demo.' | ||||
print 'Executing this block should require confirmation before proceeding,' | ||||
print 'unless auto_all has been set to true in the demo object' | ||||
# The mark below defines a block boundary, which is a point where IPython will | ||||
# stop execution and return to the interactive prompt. | ||||
# Note that in actual interactive execution, | ||||
# <demo> --- stop --- | ||||
x = 1 | ||||
y = 2 | ||||
# <demo> --- stop --- | ||||
# the mark below makes this block as silent | ||||
# <demo> silent | ||||
print 'This is a silent block, which gets executed but not printed.' | ||||
# <demo> --- stop --- | ||||
# <demo> auto | ||||
print 'This is an automatic block.' | ||||
print 'It is executed without asking for confirmation, but printed.' | ||||
z = x+y | ||||
print 'z=',x | ||||
# <demo> --- stop --- | ||||
# This is just another normal block. | ||||
print 'z is now:', z | ||||
print 'bye!' | ||||
In order to run a file as a demo, you must first make a Demo object out | ||||
of it. If the file is named myscript.py, the following code will make a | ||||
demo:: | ||||
from IPython.demo import Demo | ||||
mydemo = Demo('myscript.py') | ||||
This creates the mydemo object, whose blocks you run one at a time by | ||||
simply calling the object with no arguments. If you have autocall active | ||||
in IPython (the default), all you need to do is type:: | ||||
mydemo | ||||
and IPython will call it, executing each block. Demo objects can be | ||||
restarted, you can move forward or back skipping blocks, re-execute the | ||||
last block, etc. Simply use the Tab key on a demo object to see its | ||||
methods, and call '?' on them to see their docstrings for more usage | ||||
details. In addition, the demo module itself contains a comprehensive | ||||
docstring, which you can access via:: | ||||
from IPython import demo | ||||
demo? | ||||
Limitations: It is important to note that these demos are limited to | ||||
fairly simple uses. In particular, you can not put division marks in | ||||
indented code (loops, if statements, function definitions, etc.) | ||||
Supporting something like this would basically require tracking the | ||||
internal execution state of the Python interpreter, so only top-level | ||||
divisions are allowed. If you want to be able to open an IPython | ||||
instance at an arbitrary point in a program, you can use IPython's | ||||
embedding facilities, described in detail in Sec. 9 | ||||
Brian Granger
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r2197 | .. [Matplotlib] Matplotlib. http://matplotlib.sourceforge.net | ||
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r1258 | |||