launcher.py
1069 lines
| 37.1 KiB
| text/x-python
|
PythonLexer
MinRK
|
r3605 | #!/usr/bin/env python | ||
# encoding: utf-8 | ||||
""" | ||||
Facilities for launching IPython processes asynchronously. | ||||
""" | ||||
#----------------------------------------------------------------------------- | ||||
# Copyright (C) 2008-2009 The IPython Development Team | ||||
# | ||||
# Distributed under the terms of the BSD License. The full license is in | ||||
# the file COPYING, distributed as part of this software. | ||||
#----------------------------------------------------------------------------- | ||||
#----------------------------------------------------------------------------- | ||||
# Imports | ||||
#----------------------------------------------------------------------------- | ||||
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r3647 | import copy | ||
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r3631 | import logging | ||
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r3605 | import os | ||
import re | ||||
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r3659 | import stat | ||
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r3605 | |||
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r3778 | # signal imports, handling various platforms, versions | ||
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r3613 | from signal import SIGINT, SIGTERM | ||
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r3605 | try: | ||
from signal import SIGKILL | ||||
except ImportError: | ||||
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r3778 | # Windows | ||
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r3605 | SIGKILL=SIGTERM | ||
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r3778 | try: | ||
# Windows >= 2.7, 3.2 | ||||
from signal import CTRL_C_EVENT as SIGINT | ||||
except ImportError: | ||||
pass | ||||
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r3613 | from subprocess import Popen, PIPE, STDOUT | ||
try: | ||||
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r3615 | from subprocess import check_output | ||
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r3613 | except ImportError: | ||
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r3647 | # pre-2.7, define check_output with Popen | ||
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r3615 | def check_output(*args, **kwargs): | ||
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r3647 | kwargs.update(dict(stdout=PIPE)) | ||
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r3613 | p = Popen(*args, **kwargs) | ||
out,err = p.communicate() | ||||
return out | ||||
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r3605 | |||
from zmq.eventloop import ioloop | ||||
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r4012 | from IPython.config.application import Application | ||
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r4016 | from IPython.config.configurable import LoggingConfigurable | ||
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r4004 | from IPython.utils.text import EvalFormatter | ||
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r3988 | from IPython.utils.traitlets import Any, Int, List, Unicode, Dict, Instance | ||
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r3605 | from IPython.utils.path import get_ipython_module_path | ||
from IPython.utils.process import find_cmd, pycmd2argv, FindCmdError | ||||
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r3771 | from .win32support import forward_read_events | ||
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r3778 | from .winhpcjob import IPControllerTask, IPEngineTask, IPControllerJob, IPEngineSetJob | ||
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r3605 | |||
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r3771 | WINDOWS = os.name == 'nt' | ||
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r3772 | |||
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r3605 | #----------------------------------------------------------------------------- | ||
# Paths to the kernel apps | ||||
#----------------------------------------------------------------------------- | ||||
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r3672 | ipcluster_cmd_argv = pycmd2argv(get_ipython_module_path( | ||
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r3673 | 'IPython.parallel.apps.ipclusterapp' | ||
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r3605 | )) | ||
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r3672 | ipengine_cmd_argv = pycmd2argv(get_ipython_module_path( | ||
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r3673 | 'IPython.parallel.apps.ipengineapp' | ||
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r3605 | )) | ||
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r3672 | ipcontroller_cmd_argv = pycmd2argv(get_ipython_module_path( | ||
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r3673 | 'IPython.parallel.apps.ipcontrollerapp' | ||
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r3605 | )) | ||
#----------------------------------------------------------------------------- | ||||
# Base launchers and errors | ||||
#----------------------------------------------------------------------------- | ||||
class LauncherError(Exception): | ||||
pass | ||||
class ProcessStateError(LauncherError): | ||||
pass | ||||
class UnknownStatus(LauncherError): | ||||
pass | ||||
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r4016 | class BaseLauncher(LoggingConfigurable): | ||
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r3605 | """An asbtraction for starting, stopping and signaling a process.""" | ||
# In all of the launchers, the work_dir is where child processes will be | ||||
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r3992 | # run. This will usually be the profile_dir, but may not be. any work_dir | ||
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r3605 | # passed into the __init__ method will override the config value. | ||
# This should not be used to set the work_dir for the actual engine | ||||
# and controller. Instead, use their own config files or the | ||||
# controller_args, engine_args attributes of the launchers to add | ||||
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r3985 | # the work_dir option. | ||
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r3605 | work_dir = Unicode(u'.') | ||
loop = Instance('zmq.eventloop.ioloop.IOLoop') | ||||
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r3647 | |||
start_data = Any() | ||||
stop_data = Any() | ||||
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r3605 | def _loop_default(self): | ||
return ioloop.IOLoop.instance() | ||||
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r3610 | def __init__(self, work_dir=u'.', config=None, **kwargs): | ||
super(BaseLauncher, self).__init__(work_dir=work_dir, config=config, **kwargs) | ||||
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r3605 | self.state = 'before' # can be before, running, after | ||
self.stop_callbacks = [] | ||||
self.start_data = None | ||||
self.stop_data = None | ||||
@property | ||||
def args(self): | ||||
"""A list of cmd and args that will be used to start the process. | ||||
This is what is passed to :func:`spawnProcess` and the first element | ||||
will be the process name. | ||||
""" | ||||
return self.find_args() | ||||
def find_args(self): | ||||
"""The ``.args`` property calls this to find the args list. | ||||
Subcommand should implement this to construct the cmd and args. | ||||
""" | ||||
raise NotImplementedError('find_args must be implemented in a subclass') | ||||
@property | ||||
def arg_str(self): | ||||
"""The string form of the program arguments.""" | ||||
return ' '.join(self.args) | ||||
@property | ||||
def running(self): | ||||
"""Am I running.""" | ||||
if self.state == 'running': | ||||
return True | ||||
else: | ||||
return False | ||||
def start(self): | ||||
"""Start the process. | ||||
This must return a deferred that fires with information about the | ||||
process starting (like a pid, job id, etc.). | ||||
""" | ||||
raise NotImplementedError('start must be implemented in a subclass') | ||||
def stop(self): | ||||
"""Stop the process and notify observers of stopping. | ||||
This must return a deferred that fires with information about the | ||||
processing stopping, like errors that occur while the process is | ||||
attempting to be shut down. This deferred won't fire when the process | ||||
actually stops. To observe the actual process stopping, see | ||||
:func:`observe_stop`. | ||||
""" | ||||
raise NotImplementedError('stop must be implemented in a subclass') | ||||
def on_stop(self, f): | ||||
"""Get a deferred that will fire when the process stops. | ||||
The deferred will fire with data that contains information about | ||||
the exit status of the process. | ||||
""" | ||||
if self.state=='after': | ||||
return f(self.stop_data) | ||||
else: | ||||
self.stop_callbacks.append(f) | ||||
def notify_start(self, data): | ||||
"""Call this to trigger startup actions. | ||||
This logs the process startup and sets the state to 'running'. It is | ||||
a pass-through so it can be used as a callback. | ||||
""" | ||||
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r3610 | self.log.info('Process %r started: %r' % (self.args[0], data)) | ||
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r3605 | self.start_data = data | ||
self.state = 'running' | ||||
return data | ||||
def notify_stop(self, data): | ||||
"""Call this to trigger process stop actions. | ||||
This logs the process stopping and sets the state to 'after'. Call | ||||
this to trigger all the deferreds from :func:`observe_stop`.""" | ||||
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r3610 | self.log.info('Process %r stopped: %r' % (self.args[0], data)) | ||
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r3605 | self.stop_data = data | ||
self.state = 'after' | ||||
for i in range(len(self.stop_callbacks)): | ||||
d = self.stop_callbacks.pop() | ||||
d(data) | ||||
return data | ||||
def signal(self, sig): | ||||
"""Signal the process. | ||||
Return a semi-meaningless deferred after signaling the process. | ||||
Parameters | ||||
---------- | ||||
sig : str or int | ||||
'KILL', 'INT', etc., or any signal number | ||||
""" | ||||
raise NotImplementedError('signal must be implemented in a subclass') | ||||
#----------------------------------------------------------------------------- | ||||
# Local process launchers | ||||
#----------------------------------------------------------------------------- | ||||
class LocalProcessLauncher(BaseLauncher): | ||||
"""Start and stop an external process in an asynchronous manner. | ||||
This will launch the external process with a working directory of | ||||
``self.work_dir``. | ||||
""" | ||||
# This is used to to construct self.args, which is passed to | ||||
# spawnProcess. | ||||
cmd_and_args = List([]) | ||||
poll_frequency = Int(100) # in ms | ||||
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r3610 | def __init__(self, work_dir=u'.', config=None, **kwargs): | ||
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r3605 | super(LocalProcessLauncher, self).__init__( | ||
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r3610 | work_dir=work_dir, config=config, **kwargs | ||
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r3605 | ) | ||
self.process = None | ||||
self.start_deferred = None | ||||
self.poller = None | ||||
def find_args(self): | ||||
return self.cmd_and_args | ||||
def start(self): | ||||
if self.state == 'before': | ||||
self.process = Popen(self.args, | ||||
stdout=PIPE,stderr=PIPE,stdin=PIPE, | ||||
env=os.environ, | ||||
cwd=self.work_dir | ||||
) | ||||
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r3771 | if WINDOWS: | ||
self.stdout = forward_read_events(self.process.stdout) | ||||
self.stderr = forward_read_events(self.process.stderr) | ||||
else: | ||||
self.stdout = self.process.stdout.fileno() | ||||
self.stderr = self.process.stderr.fileno() | ||||
self.loop.add_handler(self.stdout, self.handle_stdout, self.loop.READ) | ||||
self.loop.add_handler(self.stderr, self.handle_stderr, self.loop.READ) | ||||
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r3605 | self.poller = ioloop.PeriodicCallback(self.poll, self.poll_frequency, self.loop) | ||
self.poller.start() | ||||
self.notify_start(self.process.pid) | ||||
else: | ||||
s = 'The process was already started and has state: %r' % self.state | ||||
raise ProcessStateError(s) | ||||
def stop(self): | ||||
return self.interrupt_then_kill() | ||||
def signal(self, sig): | ||||
if self.state == 'running': | ||||
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r3778 | if WINDOWS and sig != SIGINT: | ||
# use Windows tree-kill for better child cleanup | ||||
check_output(['taskkill', '-pid', str(self.process.pid), '-t', '-f']) | ||||
else: | ||||
self.process.send_signal(sig) | ||||
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r3605 | |||
def interrupt_then_kill(self, delay=2.0): | ||||
"""Send INT, wait a delay and then send KILL.""" | ||||
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r3778 | try: | ||
self.signal(SIGINT) | ||||
except Exception: | ||||
self.log.debug("interrupt failed") | ||||
pass | ||||
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r3605 | self.killer = ioloop.DelayedCallback(lambda : self.signal(SIGKILL), delay*1000, self.loop) | ||
self.killer.start() | ||||
# callbacks, etc: | ||||
def handle_stdout(self, fd, events): | ||||
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r3771 | if WINDOWS: | ||
line = self.stdout.recv() | ||||
else: | ||||
line = self.process.stdout.readline() | ||||
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r3605 | # a stopped process will be readable but return empty strings | ||
if line: | ||||
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r3610 | self.log.info(line[:-1]) | ||
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r3605 | else: | ||
self.poll() | ||||
def handle_stderr(self, fd, events): | ||||
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r3771 | if WINDOWS: | ||
line = self.stderr.recv() | ||||
else: | ||||
line = self.process.stderr.readline() | ||||
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r3605 | # a stopped process will be readable but return empty strings | ||
if line: | ||||
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r3610 | self.log.error(line[:-1]) | ||
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r3605 | else: | ||
self.poll() | ||||
def poll(self): | ||||
status = self.process.poll() | ||||
if status is not None: | ||||
self.poller.stop() | ||||
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r3771 | self.loop.remove_handler(self.stdout) | ||
self.loop.remove_handler(self.stderr) | ||||
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r3605 | self.notify_stop(dict(exit_code=status, pid=self.process.pid)) | ||
return status | ||||
class LocalControllerLauncher(LocalProcessLauncher): | ||||
"""Launch a controller as a regular external process.""" | ||||
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r3985 | controller_cmd = List(ipcontroller_cmd_argv, config=True, | ||
help="""Popen command to launch ipcontroller.""") | ||||
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r3605 | # Command line arguments to ipcontroller. | ||
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r3985 | controller_args = List(['--log-to-file','log_level=%i'%logging.INFO], config=True, | ||
help="""command-line args to pass to ipcontroller""") | ||||
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r3605 | |||
def find_args(self): | ||||
return self.controller_cmd + self.controller_args | ||||
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r3992 | def start(self, profile_dir): | ||
"""Start the controller by profile_dir.""" | ||||
self.controller_args.extend(['profile_dir=%s'%profile_dir]) | ||||
self.profile_dir = unicode(profile_dir) | ||||
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r3610 | self.log.info("Starting LocalControllerLauncher: %r" % self.args) | ||
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r3605 | return super(LocalControllerLauncher, self).start() | ||
class LocalEngineLauncher(LocalProcessLauncher): | ||||
"""Launch a single engine as a regular externall process.""" | ||||
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r3985 | engine_cmd = List(ipengine_cmd_argv, config=True, | ||
help="""command to launch the Engine.""") | ||||
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r3605 | # Command line arguments for ipengine. | ||
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r3985 | engine_args = List(['--log-to-file','log_level=%i'%logging.INFO], config=True, | ||
help="command-line arguments to pass to ipengine" | ||||
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r3605 | ) | ||
def find_args(self): | ||||
return self.engine_cmd + self.engine_args | ||||
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r3992 | def start(self, profile_dir): | ||
"""Start the engine by profile_dir.""" | ||||
self.engine_args.extend(['profile_dir=%s'%profile_dir]) | ||||
self.profile_dir = unicode(profile_dir) | ||||
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r3605 | return super(LocalEngineLauncher, self).start() | ||
class LocalEngineSetLauncher(BaseLauncher): | ||||
"""Launch a set of engines as regular external processes.""" | ||||
# Command line arguments for ipengine. | ||||
engine_args = List( | ||||
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r3985 | ['--log-to-file','log_level=%i'%logging.INFO], config=True, | ||
help="command-line arguments to pass to ipengine" | ||||
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r3605 | ) | ||
# launcher class | ||||
launcher_class = LocalEngineLauncher | ||||
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r3647 | launchers = Dict() | ||
stop_data = Dict() | ||||
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r3610 | def __init__(self, work_dir=u'.', config=None, **kwargs): | ||
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r3605 | super(LocalEngineSetLauncher, self).__init__( | ||
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r3610 | work_dir=work_dir, config=config, **kwargs | ||
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r3605 | ) | ||
self.stop_data = {} | ||||
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r3992 | def start(self, n, profile_dir): | ||
"""Start n engines by profile or profile_dir.""" | ||||
self.profile_dir = unicode(profile_dir) | ||||
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r3605 | dlist = [] | ||
for i in range(n): | ||||
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r4007 | el = self.launcher_class(work_dir=self.work_dir, config=self.config, log=self.log) | ||
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r3605 | # Copy the engine args over to each engine launcher. | ||
el.engine_args = copy.deepcopy(self.engine_args) | ||||
el.on_stop(self._notice_engine_stopped) | ||||
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r3992 | d = el.start(profile_dir) | ||
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r3605 | if i==0: | ||
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r3610 | self.log.info("Starting LocalEngineSetLauncher: %r" % el.args) | ||
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r3605 | self.launchers[i] = el | ||
dlist.append(d) | ||||
self.notify_start(dlist) | ||||
# The consumeErrors here could be dangerous | ||||
# dfinal = gatherBoth(dlist, consumeErrors=True) | ||||
# dfinal.addCallback(self.notify_start) | ||||
return dlist | ||||
def find_args(self): | ||||
return ['engine set'] | ||||
def signal(self, sig): | ||||
dlist = [] | ||||
for el in self.launchers.itervalues(): | ||||
d = el.signal(sig) | ||||
dlist.append(d) | ||||
# dfinal = gatherBoth(dlist, consumeErrors=True) | ||||
return dlist | ||||
def interrupt_then_kill(self, delay=1.0): | ||||
dlist = [] | ||||
for el in self.launchers.itervalues(): | ||||
d = el.interrupt_then_kill(delay) | ||||
dlist.append(d) | ||||
# dfinal = gatherBoth(dlist, consumeErrors=True) | ||||
return dlist | ||||
def stop(self): | ||||
return self.interrupt_then_kill() | ||||
def _notice_engine_stopped(self, data): | ||||
pid = data['pid'] | ||||
for idx,el in self.launchers.iteritems(): | ||||
if el.process.pid == pid: | ||||
break | ||||
self.launchers.pop(idx) | ||||
self.stop_data[idx] = data | ||||
if not self.launchers: | ||||
self.notify_stop(self.stop_data) | ||||
#----------------------------------------------------------------------------- | ||||
# MPIExec launchers | ||||
#----------------------------------------------------------------------------- | ||||
class MPIExecLauncher(LocalProcessLauncher): | ||||
"""Launch an external process using mpiexec.""" | ||||
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r3985 | mpi_cmd = List(['mpiexec'], config=True, | ||
help="The mpiexec command to use in starting the process." | ||||
) | ||||
mpi_args = List([], config=True, | ||||
help="The command line arguments to pass to mpiexec." | ||||
) | ||||
program = List(['date'], config=True, | ||||
help="The program to start via mpiexec.") | ||||
program_args = List([], config=True, | ||||
help="The command line argument to the program." | ||||
) | ||||
n = Int(1) | ||||
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r3605 | |||
def find_args(self): | ||||
"""Build self.args using all the fields.""" | ||||
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r3647 | return self.mpi_cmd + ['-n', str(self.n)] + self.mpi_args + \ | ||
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r3605 | self.program + self.program_args | ||
def start(self, n): | ||||
"""Start n instances of the program using mpiexec.""" | ||||
self.n = n | ||||
return super(MPIExecLauncher, self).start() | ||||
class MPIExecControllerLauncher(MPIExecLauncher): | ||||
"""Launch a controller using mpiexec.""" | ||||
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r3985 | controller_cmd = List(ipcontroller_cmd_argv, config=True, | ||
help="Popen command to launch the Contropper" | ||||
) | ||||
controller_args = List(['--log-to-file','log_level=%i'%logging.INFO], config=True, | ||||
help="Command line arguments to pass to ipcontroller." | ||||
) | ||||
n = Int(1) | ||||
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r3605 | |||
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r3992 | def start(self, profile_dir): | ||
"""Start the controller by profile_dir.""" | ||||
self.controller_args.extend(['profile_dir=%s'%profile_dir]) | ||||
self.profile_dir = unicode(profile_dir) | ||||
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r3610 | self.log.info("Starting MPIExecControllerLauncher: %r" % self.args) | ||
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r3605 | return super(MPIExecControllerLauncher, self).start(1) | ||
def find_args(self): | ||||
return self.mpi_cmd + ['-n', self.n] + self.mpi_args + \ | ||||
self.controller_cmd + self.controller_args | ||||
class MPIExecEngineSetLauncher(MPIExecLauncher): | ||||
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r3985 | program = List(ipengine_cmd_argv, config=True, | ||
help="Popen command for ipengine" | ||||
) | ||||
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r3647 | program_args = List( | ||
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r3985 | ['--log-to-file','log_level=%i'%logging.INFO], config=True, | ||
help="Command line arguments for ipengine." | ||||
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r3605 | ) | ||
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r3985 | n = Int(1) | ||
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r3605 | |||
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r3992 | def start(self, n, profile_dir): | ||
"""Start n engines by profile or profile_dir.""" | ||||
self.program_args.extend(['profile_dir=%s'%profile_dir]) | ||||
self.profile_dir = unicode(profile_dir) | ||||
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r3605 | self.n = n | ||
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r3610 | self.log.info('Starting MPIExecEngineSetLauncher: %r' % self.args) | ||
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r3605 | return super(MPIExecEngineSetLauncher, self).start(n) | ||
#----------------------------------------------------------------------------- | ||||
# SSH launchers | ||||
#----------------------------------------------------------------------------- | ||||
# TODO: Get SSH Launcher working again. | ||||
class SSHLauncher(LocalProcessLauncher): | ||||
"""A minimal launcher for ssh. | ||||
To be useful this will probably have to be extended to use the ``sshx`` | ||||
idea for environment variables. There could be other things this needs | ||||
as well. | ||||
""" | ||||
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r3985 | ssh_cmd = List(['ssh'], config=True, | ||
help="command for starting ssh") | ||||
ssh_args = List(['-tt'], config=True, | ||||
help="args to pass to ssh") | ||||
program = List(['date'], config=True, | ||||
help="Program to launch via ssh") | ||||
program_args = List([], config=True, | ||||
help="args to pass to remote program") | ||||
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r3988 | hostname = Unicode('', config=True, | ||
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r3985 | help="hostname on which to launch the program") | ||
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r3988 | user = Unicode('', config=True, | ||
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r3985 | help="username for ssh") | ||
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r3988 | location = Unicode('', config=True, | ||
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r3985 | help="user@hostname location for ssh in one setting") | ||
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r3605 | |||
def _hostname_changed(self, name, old, new): | ||||
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r3647 | if self.user: | ||
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r3659 | self.location = u'%s@%s' % (self.user, new) | ||
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r3647 | else: | ||
self.location = new | ||||
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r3605 | |||
def _user_changed(self, name, old, new): | ||||
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r3659 | self.location = u'%s@%s' % (new, self.hostname) | ||
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r3605 | |||
def find_args(self): | ||||
return self.ssh_cmd + self.ssh_args + [self.location] + \ | ||||
self.program + self.program_args | ||||
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r3992 | def start(self, profile_dir, hostname=None, user=None): | ||
self.profile_dir = unicode(profile_dir) | ||||
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r3605 | if hostname is not None: | ||
self.hostname = hostname | ||||
if user is not None: | ||||
self.user = user | ||||
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|
r3647 | |||
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r3605 | return super(SSHLauncher, self).start() | ||
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r3615 | |||
def signal(self, sig): | ||||
if self.state == 'running': | ||||
# send escaped ssh connection-closer | ||||
self.process.stdin.write('~.') | ||||
self.process.stdin.flush() | ||||
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|
r3605 | |||
class SSHControllerLauncher(SSHLauncher): | ||||
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r3985 | program = List(ipcontroller_cmd_argv, config=True, | ||
help="remote ipcontroller command.") | ||||
program_args = List(['--reuse-files', '--log-to-file','log_level=%i'%logging.INFO], config=True, | ||||
help="Command line arguments to ipcontroller.") | ||||
MinRK
|
r3605 | |||
class SSHEngineLauncher(SSHLauncher): | ||||
MinRK
|
r3985 | program = List(ipengine_cmd_argv, config=True, | ||
help="remote ipengine command.") | ||||
MinRK
|
r3605 | # Command line arguments for ipengine. | ||
program_args = List( | ||||
MinRK
|
r3985 | ['--log-to-file','log_level=%i'%logging.INFO], config=True, | ||
help="Command line arguments to ipengine." | ||||
MinRK
|
r3605 | ) | ||
class SSHEngineSetLauncher(LocalEngineSetLauncher): | ||||
launcher_class = SSHEngineLauncher | ||||
MinRK
|
r3985 | engines = Dict(config=True, | ||
help="""dict of engines to launch. This is a dict by hostname of ints, | ||||
corresponding to the number of engines to start on that host.""") | ||||
MinRK
|
r3647 | |||
MinRK
|
r3992 | def start(self, n, profile_dir): | ||
"""Start engines by profile or profile_dir. | ||||
MinRK
|
r3647 | `n` is ignored, and the `engines` config property is used instead. | ||
""" | ||||
MinRK
|
r3992 | self.profile_dir = unicode(profile_dir) | ||
MinRK
|
r3647 | dlist = [] | ||
for host, n in self.engines.iteritems(): | ||||
if isinstance(n, (tuple, list)): | ||||
n, args = n | ||||
else: | ||||
args = copy.deepcopy(self.engine_args) | ||||
if '@' in host: | ||||
user,host = host.split('@',1) | ||||
else: | ||||
user=None | ||||
for i in range(n): | ||||
MinRK
|
r4007 | el = self.launcher_class(work_dir=self.work_dir, config=self.config, log=self.log) | ||
MinRK
|
r3647 | |||
# Copy the engine args over to each engine launcher. | ||||
i | ||||
el.program_args = args | ||||
el.on_stop(self._notice_engine_stopped) | ||||
MinRK
|
r3992 | d = el.start(profile_dir, user=user, hostname=host) | ||
MinRK
|
r3647 | if i==0: | ||
self.log.info("Starting SSHEngineSetLauncher: %r" % el.args) | ||||
self.launchers[host+str(i)] = el | ||||
dlist.append(d) | ||||
self.notify_start(dlist) | ||||
return dlist | ||||
MinRK
|
r3605 | |||
#----------------------------------------------------------------------------- | ||||
# Windows HPC Server 2008 scheduler launchers | ||||
#----------------------------------------------------------------------------- | ||||
MinRK
|
r3613 | # This is only used on Windows. | ||
def find_job_cmd(): | ||||
MinRK
|
r3771 | if WINDOWS: | ||
MinRK
|
r3613 | try: | ||
return find_cmd('job') | ||||
MinRK
|
r3770 | except (FindCmdError, ImportError): | ||
# ImportError will be raised if win32api is not installed | ||||
MinRK
|
r3613 | return 'job' | ||
else: | ||||
return 'job' | ||||
class WindowsHPCLauncher(BaseLauncher): | ||||
MinRK
|
r3988 | job_id_regexp = Unicode(r'\d+', config=True, | ||
MinRK
|
r3985 | help="""A regular expression used to get the job id from the output of the | ||
submit_command. """ | ||||
) | ||||
MinRK
|
r3988 | job_file_name = Unicode(u'ipython_job.xml', config=True, | ||
MinRK
|
r3985 | help="The filename of the instantiated job script.") | ||
MinRK
|
r3613 | # The full path to the instantiated job script. This gets made dynamically | ||
# by combining the work_dir with the job_file_name. | ||||
MinRK
|
r3988 | job_file = Unicode(u'') | ||
scheduler = Unicode('', config=True, | ||||
MinRK
|
r3985 | help="The hostname of the scheduler to submit the job to.") | ||
MinRK
|
r3988 | job_cmd = Unicode(find_job_cmd(), config=True, | ||
MinRK
|
r3985 | help="The command for submitting jobs.") | ||
MinRK
|
r3613 | |||
MinRK
|
r3615 | def __init__(self, work_dir=u'.', config=None, **kwargs): | ||
MinRK
|
r3613 | super(WindowsHPCLauncher, self).__init__( | ||
MinRK
|
r3615 | work_dir=work_dir, config=config, **kwargs | ||
MinRK
|
r3613 | ) | ||
@property | ||||
def job_file(self): | ||||
return os.path.join(self.work_dir, self.job_file_name) | ||||
def write_job_file(self, n): | ||||
raise NotImplementedError("Implement write_job_file in a subclass.") | ||||
def find_args(self): | ||||
MinRK
|
r3659 | return [u'job.exe'] | ||
MinRK
|
r3613 | |||
def parse_job_id(self, output): | ||||
"""Take the output of the submit command and return the job id.""" | ||||
m = re.search(self.job_id_regexp, output) | ||||
if m is not None: | ||||
job_id = m.group() | ||||
else: | ||||
raise LauncherError("Job id couldn't be determined: %s" % output) | ||||
self.job_id = job_id | ||||
self.log.info('Job started with job id: %r' % job_id) | ||||
return job_id | ||||
def start(self, n): | ||||
"""Start n copies of the process using the Win HPC job scheduler.""" | ||||
self.write_job_file(n) | ||||
args = [ | ||||
'submit', | ||||
'/jobfile:%s' % self.job_file, | ||||
'/scheduler:%s' % self.scheduler | ||||
] | ||||
self.log.info("Starting Win HPC Job: %s" % (self.job_cmd + ' ' + ' '.join(args),)) | ||||
# Twisted will raise DeprecationWarnings if we try to pass unicode to this | ||||
output = check_output([self.job_cmd]+args, | ||||
env=os.environ, | ||||
cwd=self.work_dir, | ||||
stderr=STDOUT | ||||
) | ||||
job_id = self.parse_job_id(output) | ||||
MinRK
|
r3647 | self.notify_start(job_id) | ||
MinRK
|
r3613 | return job_id | ||
def stop(self): | ||||
args = [ | ||||
'cancel', | ||||
self.job_id, | ||||
'/scheduler:%s' % self.scheduler | ||||
] | ||||
self.log.info("Stopping Win HPC Job: %s" % (self.job_cmd + ' ' + ' '.join(args),)) | ||||
try: | ||||
output = check_output([self.job_cmd]+args, | ||||
env=os.environ, | ||||
cwd=self.work_dir, | ||||
stderr=STDOUT | ||||
) | ||||
except: | ||||
output = 'The job already appears to be stoppped: %r' % self.job_id | ||||
MinRK
|
r3647 | self.notify_stop(dict(job_id=self.job_id, output=output)) # Pass the output of the kill cmd | ||
MinRK
|
r3613 | return output | ||
class WindowsHPCControllerLauncher(WindowsHPCLauncher): | ||||
MinRK
|
r3988 | job_file_name = Unicode(u'ipcontroller_job.xml', config=True, | ||
MinRK
|
r3985 | help="WinHPC xml job file.") | ||
extra_args = List([], config=False, | ||||
help="extra args to pass to ipcontroller") | ||||
MinRK
|
r3613 | |||
def write_job_file(self, n): | ||||
job = IPControllerJob(config=self.config) | ||||
t = IPControllerTask(config=self.config) | ||||
# The tasks work directory is *not* the actual work directory of | ||||
# the controller. It is used as the base path for the stdout/stderr | ||||
# files that the scheduler redirects to. | ||||
MinRK
|
r3992 | t.work_directory = self.profile_dir | ||
# Add the profile_dir and from self.start(). | ||||
MinRK
|
r3613 | t.controller_args.extend(self.extra_args) | ||
job.add_task(t) | ||||
self.log.info("Writing job description file: %s" % self.job_file) | ||||
job.write(self.job_file) | ||||
@property | ||||
def job_file(self): | ||||
MinRK
|
r3992 | return os.path.join(self.profile_dir, self.job_file_name) | ||
MinRK
|
r3613 | |||
MinRK
|
r3992 | def start(self, profile_dir): | ||
"""Start the controller by profile_dir.""" | ||||
self.extra_args = ['profile_dir=%s'%profile_dir] | ||||
self.profile_dir = unicode(profile_dir) | ||||
MinRK
|
r3613 | return super(WindowsHPCControllerLauncher, self).start(1) | ||
class WindowsHPCEngineSetLauncher(WindowsHPCLauncher): | ||||
MinRK
|
r3988 | job_file_name = Unicode(u'ipengineset_job.xml', config=True, | ||
MinRK
|
r3985 | help="jobfile for ipengines job") | ||
extra_args = List([], config=False, | ||||
help="extra args to pas to ipengine") | ||||
MinRK
|
r3613 | |||
def write_job_file(self, n): | ||||
job = IPEngineSetJob(config=self.config) | ||||
for i in range(n): | ||||
t = IPEngineTask(config=self.config) | ||||
# The tasks work directory is *not* the actual work directory of | ||||
# the engine. It is used as the base path for the stdout/stderr | ||||
# files that the scheduler redirects to. | ||||
MinRK
|
r3992 | t.work_directory = self.profile_dir | ||
# Add the profile_dir and from self.start(). | ||||
MinRK
|
r3613 | t.engine_args.extend(self.extra_args) | ||
job.add_task(t) | ||||
self.log.info("Writing job description file: %s" % self.job_file) | ||||
job.write(self.job_file) | ||||
@property | ||||
def job_file(self): | ||||
MinRK
|
r3992 | return os.path.join(self.profile_dir, self.job_file_name) | ||
MinRK
|
r3613 | |||
MinRK
|
r3992 | def start(self, n, profile_dir): | ||
"""Start the controller by profile_dir.""" | ||||
self.extra_args = ['profile_dir=%s'%profile_dir] | ||||
self.profile_dir = unicode(profile_dir) | ||||
MinRK
|
r3613 | return super(WindowsHPCEngineSetLauncher, self).start(n) | ||
#----------------------------------------------------------------------------- | ||||
# Batch (PBS) system launchers | ||||
#----------------------------------------------------------------------------- | ||||
class BatchSystemLauncher(BaseLauncher): | ||||
"""Launch an external process using a batch system. | ||||
This class is designed to work with UNIX batch systems like PBS, LSF, | ||||
GridEngine, etc. The overall model is that there are different commands | ||||
like qsub, qdel, etc. that handle the starting and stopping of the process. | ||||
This class also has the notion of a batch script. The ``batch_template`` | ||||
attribute can be set to a string that is a template for the batch script. | ||||
Thomas Kluyver
|
r4003 | This template is instantiated using string formatting. Thus the template can | ||
use {n} fot the number of instances. Subclasses can add additional variables | ||||
MinRK
|
r3613 | to the template dict. | ||
""" | ||||
# Subclasses must fill these in. See PBSEngineSet | ||||
MinRK
|
r3985 | submit_command = List([''], config=True, | ||
help="The name of the command line program used to submit jobs.") | ||||
delete_command = List([''], config=True, | ||||
help="The name of the command line program used to delete jobs.") | ||||
MinRK
|
r3988 | job_id_regexp = Unicode('', config=True, | ||
MinRK
|
r3985 | help="""A regular expression used to get the job id from the output of the | ||
submit_command.""") | ||||
MinRK
|
r3988 | batch_template = Unicode('', config=True, | ||
MinRK
|
r3985 | help="The string that is the batch script template itself.") | ||
MinRK
|
r3988 | batch_template_file = Unicode(u'', config=True, | ||
MinRK
|
r3985 | help="The file that contains the batch template.") | ||
MinRK
|
r3988 | batch_file_name = Unicode(u'batch_script', config=True, | ||
MinRK
|
r3985 | help="The filename of the instantiated batch script.") | ||
MinRK
|
r3988 | queue = Unicode(u'', config=True, | ||
MinRK
|
r3985 | help="The PBS Queue.") | ||
MinRK
|
r3659 | |||
# not configurable, override in subclasses | ||||
# PBS Job Array regex | ||||
MinRK
|
r3988 | job_array_regexp = Unicode('') | ||
job_array_template = Unicode('') | ||||
MinRK
|
r3659 | # PBS Queue regex | ||
MinRK
|
r3988 | queue_regexp = Unicode('') | ||
queue_template = Unicode('') | ||||
MinRK
|
r3659 | # The default batch template, override in subclasses | ||
MinRK
|
r3988 | default_template = Unicode('') | ||
MinRK
|
r3613 | # The full path to the instantiated batch script. | ||
MinRK
|
r3988 | batch_file = Unicode(u'') | ||
MinRK
|
r3645 | # the format dict used with batch_template: | ||
context = Dict() | ||||
MinRK
|
r4004 | # the Formatter instance for rendering the templates: | ||
formatter = Instance(EvalFormatter, (), {}) | ||||
MinRK
|
r3613 | |||
MinRK
|
r3645 | |||
def find_args(self): | ||||
MinRK
|
r3659 | return self.submit_command + [self.batch_file] | ||
MinRK
|
r3645 | |||
MinRK
|
r3615 | def __init__(self, work_dir=u'.', config=None, **kwargs): | ||
MinRK
|
r3613 | super(BatchSystemLauncher, self).__init__( | ||
MinRK
|
r3615 | work_dir=work_dir, config=config, **kwargs | ||
MinRK
|
r3613 | ) | ||
self.batch_file = os.path.join(self.work_dir, self.batch_file_name) | ||||
def parse_job_id(self, output): | ||||
"""Take the output of the submit command and return the job id.""" | ||||
MinRK
|
r3647 | m = re.search(self.job_id_regexp, output) | ||
MinRK
|
r3613 | if m is not None: | ||
job_id = m.group() | ||||
else: | ||||
raise LauncherError("Job id couldn't be determined: %s" % output) | ||||
self.job_id = job_id | ||||
MinRK
|
r3647 | self.log.info('Job submitted with job id: %r' % job_id) | ||
MinRK
|
r3613 | return job_id | ||
def write_batch_script(self, n): | ||||
"""Instantiate and write the batch script to the work_dir.""" | ||||
self.context['n'] = n | ||||
MinRK
|
r3659 | self.context['queue'] = self.queue | ||
# first priority is batch_template if set | ||||
if self.batch_template_file and not self.batch_template: | ||||
# second priority is batch_template_file | ||||
with open(self.batch_template_file) as f: | ||||
self.batch_template = f.read() | ||||
if not self.batch_template: | ||||
# third (last) priority is default_template | ||||
self.batch_template = self.default_template | ||||
regex = re.compile(self.job_array_regexp) | ||||
# print regex.search(self.batch_template) | ||||
if not regex.search(self.batch_template): | ||||
self.log.info("adding job array settings to batch script") | ||||
firstline, rest = self.batch_template.split('\n',1) | ||||
self.batch_template = u'\n'.join([firstline, self.job_array_template, rest]) | ||||
regex = re.compile(self.queue_regexp) | ||||
# print regex.search(self.batch_template) | ||||
if self.queue and not regex.search(self.batch_template): | ||||
self.log.info("adding PBS queue settings to batch script") | ||||
firstline, rest = self.batch_template.split('\n',1) | ||||
self.batch_template = u'\n'.join([firstline, self.queue_template, rest]) | ||||
MinRK
|
r4004 | script_as_string = self.formatter.format(self.batch_template, **self.context) | ||
MinRK
|
r3613 | self.log.info('Writing instantiated batch script: %s' % self.batch_file) | ||
MinRK
|
r3659 | |||
with open(self.batch_file, 'w') as f: | ||||
f.write(script_as_string) | ||||
os.chmod(self.batch_file, stat.S_IRUSR | stat.S_IWUSR | stat.S_IXUSR) | ||||
MinRK
|
r3613 | |||
MinRK
|
r3992 | def start(self, n, profile_dir): | ||
MinRK
|
r3613 | """Start n copies of the process using a batch system.""" | ||
Thomas Kluyver
|
r4003 | # Here we save profile_dir in the context so they | ||
# can be used in the batch script template as {profile_dir} | ||||
MinRK
|
r3992 | self.context['profile_dir'] = profile_dir | ||
self.profile_dir = unicode(profile_dir) | ||||
MinRK
|
r3613 | self.write_batch_script(n) | ||
MinRK
|
r3647 | output = check_output(self.args, env=os.environ) | ||
MinRK
|
r3613 | job_id = self.parse_job_id(output) | ||
MinRK
|
r3647 | self.notify_start(job_id) | ||
MinRK
|
r3613 | return job_id | ||
def stop(self): | ||||
MinRK
|
r3659 | output = check_output(self.delete_command+[self.job_id], env=os.environ) | ||
MinRK
|
r3647 | self.notify_stop(dict(job_id=self.job_id, output=output)) # Pass the output of the kill cmd | ||
MinRK
|
r3613 | return output | ||
class PBSLauncher(BatchSystemLauncher): | ||||
"""A BatchSystemLauncher subclass for PBS.""" | ||||
MinRK
|
r3985 | submit_command = List(['qsub'], config=True, | ||
help="The PBS submit command ['qsub']") | ||||
delete_command = List(['qdel'], config=True, | ||||
help="The PBS delete command ['qsub']") | ||||
MinRK
|
r3988 | job_id_regexp = Unicode(r'\d+', config=True, | ||
MinRK
|
r3985 | help="Regular expresion for identifying the job ID [r'\d+']") | ||
MinRK
|
r3659 | |||
MinRK
|
r3988 | batch_file = Unicode(u'') | ||
job_array_regexp = Unicode('#PBS\W+-t\W+[\w\d\-\$]+') | ||||
Thomas Kluyver
|
r4003 | job_array_template = Unicode('#PBS -t 1-{n}') | ||
MinRK
|
r3988 | queue_regexp = Unicode('#PBS\W+-q\W+\$?\w+') | ||
Thomas Kluyver
|
r4003 | queue_template = Unicode('#PBS -q {queue}') | ||
MinRK
|
r3613 | |||
class PBSControllerLauncher(PBSLauncher): | ||||
"""Launch a controller using PBS.""" | ||||
MinRK
|
r3988 | batch_file_name = Unicode(u'pbs_controller', config=True, | ||
MinRK
|
r3985 | help="batch file name for the controller job.") | ||
MinRK
|
r3988 | default_template= Unicode("""#!/bin/sh | ||
MinRK
|
r3659 | #PBS -V | ||
MinRK
|
r3672 | #PBS -N ipcontroller | ||
Thomas Kluyver
|
r4003 | %s --log-to-file profile_dir={profile_dir} | ||
MinRK
|
r3672 | """%(' '.join(ipcontroller_cmd_argv))) | ||
MinRK
|
r3613 | |||
MinRK
|
r3992 | def start(self, profile_dir): | ||
"""Start the controller by profile or profile_dir.""" | ||||
MinRK
|
r3613 | self.log.info("Starting PBSControllerLauncher: %r" % self.args) | ||
MinRK
|
r3992 | return super(PBSControllerLauncher, self).start(1, profile_dir) | ||
MinRK
|
r3613 | |||
class PBSEngineSetLauncher(PBSLauncher): | ||||
MinRK
|
r3659 | """Launch Engines using PBS""" | ||
MinRK
|
r3988 | batch_file_name = Unicode(u'pbs_engines', config=True, | ||
MinRK
|
r3985 | help="batch file name for the engine(s) job.") | ||
MinRK
|
r3988 | default_template= Unicode(u"""#!/bin/sh | ||
MinRK
|
r3659 | #PBS -V | ||
MinRK
|
r3672 | #PBS -N ipengine | ||
Thomas Kluyver
|
r4003 | %s profile_dir={profile_dir} | ||
MinRK
|
r3672 | """%(' '.join(ipengine_cmd_argv))) | ||
MinRK
|
r3613 | |||
MinRK
|
r3992 | def start(self, n, profile_dir): | ||
"""Start n engines by profile or profile_dir.""" | ||||
MinRK
|
r3668 | self.log.info('Starting %i engines with PBSEngineSetLauncher: %r' % (n, self.args)) | ||
MinRK
|
r3992 | return super(PBSEngineSetLauncher, self).start(n, profile_dir) | ||
MinRK
|
r3605 | |||
MinRK
|
r3659 | #SGE is very similar to PBS | ||
class SGELauncher(PBSLauncher): | ||||
"""Sun GridEngine is a PBS clone with slightly different syntax""" | ||||
Thomas Kluyver
|
r4003 | job_array_regexp = Unicode('#\$\W+\-t') | ||
job_array_template = Unicode('#$ -t 1-{n}') | ||||
queue_regexp = Unicode('#\$\W+-q\W+\$?\w+') | ||||
queue_template = Unicode('#$ -q $queue') | ||||
MinRK
|
r3659 | |||
class SGEControllerLauncher(SGELauncher): | ||||
"""Launch a controller using SGE.""" | ||||
MinRK
|
r3988 | batch_file_name = Unicode(u'sge_controller', config=True, | ||
MinRK
|
r3985 | help="batch file name for the ipontroller job.") | ||
Thomas Kluyver
|
r4003 | default_template= Unicode(u"""#$ -V | ||
#$ -S /bin/sh | ||||
#$ -N ipcontroller | ||||
%s --log-to-file profile_dir={profile_dir} | ||||
MinRK
|
r3672 | """%(' '.join(ipcontroller_cmd_argv))) | ||
MinRK
|
r3659 | |||
MinRK
|
r3992 | def start(self, profile_dir): | ||
"""Start the controller by profile or profile_dir.""" | ||||
MinRK
|
r3659 | self.log.info("Starting PBSControllerLauncher: %r" % self.args) | ||
MinRK
|
r4001 | return super(SGEControllerLauncher, self).start(1, profile_dir) | ||
MinRK
|
r3659 | |||
class SGEEngineSetLauncher(SGELauncher): | ||||
"""Launch Engines with SGE""" | ||||
MinRK
|
r3988 | batch_file_name = Unicode(u'sge_engines', config=True, | ||
MinRK
|
r3985 | help="batch file name for the engine(s) job.") | ||
Thomas Kluyver
|
r4003 | default_template = Unicode("""#$ -V | ||
#$ -S /bin/sh | ||||
#$ -N ipengine | ||||
%s profile_dir={profile_dir} | ||||
MinRK
|
r3672 | """%(' '.join(ipengine_cmd_argv))) | ||
MinRK
|
r3659 | |||
MinRK
|
r3992 | def start(self, n, profile_dir): | ||
"""Start n engines by profile or profile_dir.""" | ||||
MinRK
|
r3668 | self.log.info('Starting %i engines with SGEEngineSetLauncher: %r' % (n, self.args)) | ||
MinRK
|
r3992 | return super(SGEEngineSetLauncher, self).start(n, profile_dir) | ||
MinRK
|
r3659 | |||
MinRK
|
r3605 | |||
#----------------------------------------------------------------------------- | ||||
# A launcher for ipcluster itself! | ||||
#----------------------------------------------------------------------------- | ||||
class IPClusterLauncher(LocalProcessLauncher): | ||||
"""Launch the ipcluster program in an external process.""" | ||||
MinRK
|
r3985 | ipcluster_cmd = List(ipcluster_cmd_argv, config=True, | ||
help="Popen command for ipcluster") | ||||
MinRK
|
r3605 | ipcluster_args = List( | ||
MinRK
|
r3985 | ['--clean-logs', '--log-to-file', 'log_level=%i'%logging.INFO], config=True, | ||
help="Command line arguments to pass to ipcluster.") | ||||
MinRK
|
r3988 | ipcluster_subcommand = Unicode('start') | ||
MinRK
|
r3605 | ipcluster_n = Int(2) | ||
def find_args(self): | ||||
MinRK
|
r3985 | return self.ipcluster_cmd + ['--'+self.ipcluster_subcommand] + \ | ||
['n=%i'%self.ipcluster_n] + self.ipcluster_args | ||||
MinRK
|
r3605 | |||
def start(self): | ||||
MinRK
|
r3610 | self.log.info("Starting ipcluster: %r" % self.args) | ||
MinRK
|
r3605 | return super(IPClusterLauncher, self).start() | ||
MinRK
|
r3985 | #----------------------------------------------------------------------------- | ||
# Collections of launchers | ||||
#----------------------------------------------------------------------------- | ||||
local_launchers = [ | ||||
LocalControllerLauncher, | ||||
LocalEngineLauncher, | ||||
LocalEngineSetLauncher, | ||||
] | ||||
mpi_launchers = [ | ||||
MPIExecLauncher, | ||||
MPIExecControllerLauncher, | ||||
MPIExecEngineSetLauncher, | ||||
] | ||||
ssh_launchers = [ | ||||
SSHLauncher, | ||||
SSHControllerLauncher, | ||||
SSHEngineLauncher, | ||||
SSHEngineSetLauncher, | ||||
] | ||||
winhpc_launchers = [ | ||||
WindowsHPCLauncher, | ||||
WindowsHPCControllerLauncher, | ||||
WindowsHPCEngineSetLauncher, | ||||
] | ||||
pbs_launchers = [ | ||||
PBSLauncher, | ||||
PBSControllerLauncher, | ||||
PBSEngineSetLauncher, | ||||
] | ||||
sge_launchers = [ | ||||
SGELauncher, | ||||
SGEControllerLauncher, | ||||
SGEEngineSetLauncher, | ||||
] | ||||
all_launchers = local_launchers + mpi_launchers + ssh_launchers + winhpc_launchers\ | ||||
Thomas Kluyver
|
r4003 | + pbs_launchers + sge_launchers | ||