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skip Python 2.6 in test_profile because python -m doesn't work

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asyncresult.py
715 lines | 24.4 KiB | text/x-python | PythonLexer
MinRK
update recently changed modules with Authors in docstring
r4018 """AsyncResult objects for the client
Authors:
* MinRK
"""
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 #-----------------------------------------------------------------------------
MinRK
copyright statements
r3660 # Copyright (C) 2010-2011 The IPython Development Team
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 #
# Distributed under the terms of the BSD License. The full license is in
# the file COPYING, distributed as part of this software.
#-----------------------------------------------------------------------------
#-----------------------------------------------------------------------------
# Imports
#-----------------------------------------------------------------------------
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r7239 from __future__ import print_function
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r6462 import sys
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r3639 import time
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r6462 from datetime import datetime
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r3639
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r3664 from zmq import MessageTracker
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r7239 from IPython.core.display import clear_output, display, display_pretty
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r3601 from IPython.external.decorator import decorator
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r3673 from IPython.parallel import error
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r3589
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r6497 #-----------------------------------------------------------------------------
# Functions
#-----------------------------------------------------------------------------
def _total_seconds(td):
"""timedelta.total_seconds was added in 2.7"""
try:
# Python >= 2.7
return td.total_seconds()
except AttributeError:
# Python 2.6
return 1e-6 * (td.microseconds + (td.seconds + td.days * 24 * 3600) * 10**6)
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r6462
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r7239 def _raw_text(s):
display_pretty(s, raw=True)
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 #-----------------------------------------------------------------------------
# Classes
#-----------------------------------------------------------------------------
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r3664 # global empty tracker that's always done:
finished_tracker = MessageTracker()
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r3601 @decorator
def check_ready(f, self, *args, **kwargs):
"""Call spin() to sync state prior to calling the method."""
self.wait(0)
if not self._ready:
raise error.TimeoutError("result not ready")
return f(self, *args, **kwargs)
MinRK
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r3589 class AsyncResult(object):
"""Class for representing results of non-blocking calls.
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r3644 Provides the same interface as :py:class:`multiprocessing.pool.AsyncResult`.
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 """
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r3618 msg_ids = None
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r3654 _targets = None
_tracker = None
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r3664 _single_result = False
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r3654 def __init__(self, client, msg_ids, fname='unknown', targets=None, tracker=None):
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r3627 if isinstance(msg_ids, basestring):
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r3664 # always a list
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r3627 msg_ids = [msg_ids]
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r11415 self._single_result = True
else:
self._single_result = False
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r3664 if tracker is None:
# default to always done
tracker = finished_tracker
self._client = client
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r3592 self.msg_ids = msg_ids
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r3596 self._fname=fname
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r3654 self._targets = targets
self._tracker = tracker
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r11415
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r3589 self._ready = False
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r8140 self._outputs_ready = False
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 self._success = None
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r8104 self._metadata = [ self._client.metadata.get(id) for id in self.msg_ids ]
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r3589 def __repr__(self):
if self._ready:
return "<%s: finished>"%(self.__class__.__name__)
else:
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r3596 return "<%s: %s>"%(self.__class__.__name__,self._fname)
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PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 def _reconstruct_result(self, res):
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r3644 """Reconstruct our result from actual result list (always a list)
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PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 Override me in subclasses for turning a list of results
into the expected form.
"""
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r3611 if self._single_result:
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r3589 return res[0]
else:
return res
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r4872
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PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 def get(self, timeout=-1):
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r4872 """Return the result when it arrives.
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 If `timeout` is not ``None`` and the result does not arrive within
`timeout` seconds then ``TimeoutError`` is raised. If the
remote call raised an exception then that exception will be reraised
MinRK
cleanup pass
r3644 by get() inside a `RemoteError`.
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r3589 """
if not self.ready():
self.wait(timeout)
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r3589 if self._ready:
if self._success:
return self._result
else:
raise self._exception
else:
raise error.TimeoutError("Result not ready.")
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r8104 def _check_ready(self):
if not self.ready():
raise error.TimeoutError("Result not ready.")
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r3589 def ready(self):
"""Return whether the call has completed."""
if not self._ready:
self.wait(0)
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r8140 elif not self._outputs_ready:
self._wait_for_outputs(0)
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r3589 return self._ready
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r3589 def wait(self, timeout=-1):
"""Wait until the result is available or until `timeout` seconds pass.
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r3644 This method always returns None.
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 """
if self._ready:
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r8140 self._wait_for_outputs(timeout)
MinRK
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r3589 return
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r3664 self._ready = self._client.wait(self.msg_ids, timeout)
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r3589 if self._ready:
try:
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r3592 results = map(self._client.results.get, self.msg_ids)
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r3601 self._result = results
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r3611 if self._single_result:
r = results[0]
if isinstance(r, Exception):
raise r
else:
results = error.collect_exceptions(results, self._fname)
MinRK
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r3589 self._result = self._reconstruct_result(results)
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r7787 except Exception as e:
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r3589 self._exception = e
self._success = False
else:
self._success = True
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r3601 finally:
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r8142 if timeout is None or timeout < 0:
# cutoff infinite wait at 10s
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r8140 timeout = 10
self._wait_for_outputs(timeout)
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r4872
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PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 def successful(self):
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r4872 """Return whether the call completed without raising an exception.
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 Will raise ``AssertionError`` if the result is not ready.
"""
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r3644 assert self.ready()
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r3589 return self._success
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r3601 #----------------------------------------------------------------
# Extra methods not in mp.pool.AsyncResult
#----------------------------------------------------------------
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r3601 def get_dict(self, timeout=-1):
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r3644 """Get the results as a dict, keyed by engine_id.
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r3644 timeout behavior is described in `get()`.
"""
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r3601 results = self.get(timeout)
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r11363 if self._single_result:
results = [results]
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r3607 engine_ids = [ md['engine_id'] for md in self._metadata ]
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r11363
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r11407
rdict = {}
for engine_id, result in zip(engine_ids, results):
if engine_id in rdict:
raise ValueError("Cannot build dict, %i jobs ran on engine #%i" % (
engine_ids.count(engine_id), engine_id)
)
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r11363 else:
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r11407 rdict[engine_id] = result
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r11407 return rdict
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r3601 @property
def result(self):
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r8104 """result property wrapper for `get(timeout=-1)`."""
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r3664 return self.get()
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r3607 # abbreviated alias:
r = result
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r3601 @property
def metadata(self):
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r3644 """property for accessing execution metadata."""
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r3611 if self._single_result:
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r3607 return self._metadata[0]
else:
return self._metadata
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r3601 @property
def result_dict(self):
"""result property as a dict."""
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r3664 return self.get_dict()
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r3602 def __dict__(self):
return self.get_dict(0)
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r3654 def abort(self):
"""abort my tasks."""
assert not self.ready(), "Can't abort, I am already done!"
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r6426 return self._client.abort(self.msg_ids, targets=self._targets, block=True)
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r3654
@property
def sent(self):
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r3664 """check whether my messages have been sent."""
return self._tracker.done
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r4872
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r3664 def wait_for_send(self, timeout=-1):
"""wait for pyzmq send to complete.
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r3664 This is necessary when sending arrays that you intend to edit in-place.
`timeout` is in seconds, and will raise TimeoutError if it is reached
before the send completes.
"""
return self._tracker.wait(timeout)
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r3602
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r3601 #-------------------------------------
# dict-access
#-------------------------------------
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r3601 def __getitem__(self, key):
"""getitem returns result value(s) if keyed by int/slice, or metadata if key is str.
"""
if isinstance(key, int):
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r8104 self._check_ready()
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r3601 return error.collect_exceptions([self._result[key]], self._fname)[0]
elif isinstance(key, slice):
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r8104 self._check_ready()
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r3601 return error.collect_exceptions(self._result[key], self._fname)
elif isinstance(key, basestring):
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r8104 # metadata proxy *does not* require that results are done
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r8140 self.wait(0)
MinRK
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r3607 values = [ md[key] for md in self._metadata ]
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r3611 if self._single_result:
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r3607 return values[0]
else:
return values
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r3601 else:
raise TypeError("Invalid key type %r, must be 'int','slice', or 'str'"%type(key))
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r3601 def __getattr__(self, key):
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r3644 """getattr maps to getitem for convenient attr access to metadata."""
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r5222 try:
return self.__getitem__(key)
except (error.TimeoutError, KeyError):
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r3601 raise AttributeError("%r object has no attribute %r"%(
self.__class__.__name__, key))
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r3639 # asynchronous iterator:
def __iter__(self):
if self._single_result:
raise TypeError("AsyncResults with a single result are not iterable.")
try:
rlist = self.get(0)
except error.TimeoutError:
# wait for each result individually
for msg_id in self.msg_ids:
ar = AsyncResult(self._client, msg_id, self._fname)
yield ar.get()
else:
# already done
for r in rlist:
yield r
MinRK
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r6462
def __len__(self):
return len(self.msg_ids)
#-------------------------------------
# Sugar methods and attributes
#-------------------------------------
MinRK
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r6470 def timedelta(self, start, end, start_key=min, end_key=max):
"""compute the difference between two sets of timestamps
The default behavior is to use the earliest of the first
and the latest of the second list, but this can be changed
by passing a different
Parameters
----------
start : one or more datetime objects (e.g. ar.submitted)
end : one or more datetime objects (e.g. ar.received)
start_key : callable
Function to call on `start` to extract the relevant
entry [defalt: min]
end_key : callable
Function to call on `end` to extract the relevant
entry [default: max]
Returns
-------
dt : float
The time elapsed (in seconds) between the two selected timestamps.
"""
if not isinstance(start, datetime):
# handle single_result AsyncResults, where ar.stamp is single object,
# not a list
start = start_key(start)
if not isinstance(end, datetime):
# handle single_result AsyncResults, where ar.stamp is single object,
# not a list
end = end_key(end)
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r6497 return _total_seconds(end - start)
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r6470
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r6462 @property
def progress(self):
"""the number of tasks which have been completed at this point.
Fractional progress would be given by 1.0 * ar.progress / len(ar)
"""
self.wait(0)
return len(self) - len(set(self.msg_ids).intersection(self._client.outstanding))
@property
def elapsed(self):
"""elapsed time since initial submission"""
if self.ready():
return self.wall_time
now = submitted = datetime.now()
for msg_id in self.msg_ids:
if msg_id in self._client.metadata:
stamp = self._client.metadata[msg_id]['submitted']
if stamp and stamp < submitted:
submitted = stamp
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r6497 return _total_seconds(now-submitted)
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r6462
@property
@check_ready
def serial_time(self):
"""serial computation time of a parallel calculation
Computed as the sum of (completed-started) of each task
"""
t = 0
for md in self._metadata:
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r6497 t += _total_seconds(md['completed'] - md['started'])
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r6462 return t
@property
@check_ready
def wall_time(self):
"""actual computation time of a parallel calculation
Computed as the time between the latest `received` stamp
and the earliest `submitted`.
Only reliable if Client was spinning/waiting when the task finished, because
the `received` timestamp is created when a result is pulled off of the zmq queue,
which happens as a result of `client.spin()`.
MinRK
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r6470
For similar comparison of other timestamp pairs, check out AsyncResult.timedelta.
MinRK
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r6462 """
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r6470 return self.timedelta(self.submitted, self.received)
MinRK
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r6462
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r8140 def wait_interactive(self, interval=1., timeout=-1):
MinRK
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r6462 """interactive wait, printing progress at regular intervals"""
MinRK
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r8140 if timeout is None:
timeout = -1
MinRK
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r6462 N = len(self)
tic = time.time()
MinRK
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r8140 while not self.ready() and (timeout < 0 or time.time() - tic <= timeout):
MinRK
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r6462 self.wait(interval)
clear_output()
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r7239 print("%4i/%i tasks finished after %4i s" % (self.progress, N, self.elapsed), end="")
MinRK
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r6462 sys.stdout.flush()
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r7239 print()
print("done")
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r7040
def _republish_displaypub(self, content, eid):
"""republish individual displaypub content dicts"""
try:
ip = get_ipython()
except NameError:
# displaypub is meaningless outside IPython
return
md = content['metadata'] or {}
md['engine'] = eid
ip.display_pub.publish(content['source'], content['data'], md)
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r7239
def _display_stream(self, text, prefix='', file=None):
if not text:
# nothing to display
return
if file is None:
file = sys.stdout
end = '' if text.endswith('\n') else '\n'
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r7040
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r7239 multiline = text.count('\n') > int(text.endswith('\n'))
if prefix and multiline and not text.startswith('\n'):
prefix = prefix + '\n'
print("%s%s" % (prefix, text), file=file, end=end)
MinRK
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r7040
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r7239
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r7040 def _display_single_result(self):
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r7239 self._display_stream(self.stdout)
self._display_stream(self.stderr, file=sys.stderr)
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r7040
try:
get_ipython()
except NameError:
# displaypub is meaningless outside IPython
return
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r7239
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r7040 for output in self.outputs:
self._republish_displaypub(output, self.engine_id)
if self.pyout is not None:
display(self.get())
MinRK
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r7494 def _wait_for_outputs(self, timeout=-1):
"""wait for the 'status=idle' message that indicates we have all outputs
"""
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r8140 if self._outputs_ready or not self._success:
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r7494 # don't wait on errors
return
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r8140
# cast None to -1 for infinite timeout
if timeout is None:
timeout = -1
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r7494 tic = time.time()
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r10617 while True:
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r7494 self._client._flush_iopub(self._client._iopub_socket)
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r10617 self._outputs_ready = all(md['outputs_ready']
for md in self._metadata)
if self._outputs_ready or \
(timeout >= 0 and time.time() > tic + timeout):
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r7494 break
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r10617 time.sleep(0.01)
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r7494
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r7040 @check_ready
def display_outputs(self, groupby="type"):
"""republish the outputs of the computation
Parameters
----------
groupby : str [default: type]
if 'type':
Group outputs by type (show all stdout, then all stderr, etc.):
[stdout:1] foo
[stdout:2] foo
[stderr:1] bar
[stderr:2] bar
if 'engine':
Display outputs for each engine before moving on to the next:
[stdout:1] foo
[stderr:1] bar
[stdout:2] foo
[stderr:2] bar
if 'order':
Like 'type', but further collate individual displaypub
outputs. This is meant for cases of each command producing
several plots, and you would like to see all of the first
plots together, then all of the second plots, and so on.
"""
if self._single_result:
self._display_single_result()
return
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r7239 stdouts = self.stdout
stderrs = self.stderr
pyouts = self.pyout
MinRK
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r7040 output_lists = self.outputs
results = self.get()
targets = self.engine_id
if groupby == "engine":
for eid,stdout,stderr,outputs,r,pyout in zip(
targets, stdouts, stderrs, output_lists, results, pyouts
):
MinRK
aesthetics pass on AsyncResult.display_outputs...
r7239 self._display_stream(stdout, '[stdout:%i] ' % eid)
self._display_stream(stderr, '[stderr:%i] ' % eid, file=sys.stderr)
MinRK
add AsyncResult.display_outputs...
r7040
try:
get_ipython()
except NameError:
# displaypub is meaningless outside IPython
return
MinRK
aesthetics pass on AsyncResult.display_outputs...
r7239 if outputs or pyout is not None:
_raw_text('[output:%i]' % eid)
MinRK
add AsyncResult.display_outputs...
r7040 for output in outputs:
self._republish_displaypub(output, eid)
if pyout is not None:
display(r)
elif groupby in ('type', 'order'):
# republish stdout:
MinRK
aesthetics pass on AsyncResult.display_outputs...
r7239 for eid,stdout in zip(targets, stdouts):
self._display_stream(stdout, '[stdout:%i] ' % eid)
MinRK
add AsyncResult.display_outputs...
r7040
# republish stderr:
MinRK
aesthetics pass on AsyncResult.display_outputs...
r7239 for eid,stderr in zip(targets, stderrs):
self._display_stream(stderr, '[stderr:%i] ' % eid, file=sys.stderr)
MinRK
add AsyncResult.display_outputs...
r7040
try:
get_ipython()
except NameError:
# displaypub is meaningless outside IPython
return
if groupby == 'order':
output_dict = dict((eid, outputs) for eid,outputs in zip(targets, output_lists))
N = max(len(outputs) for outputs in output_lists)
for i in range(N):
for eid in targets:
outputs = output_dict[eid]
if len(outputs) >= N:
MinRK
aesthetics pass on AsyncResult.display_outputs...
r7239 _raw_text('[output:%i]' % eid)
MinRK
add AsyncResult.display_outputs...
r7040 self._republish_displaypub(outputs[i], eid)
else:
# republish displaypub output
for eid,outputs in zip(targets, output_lists):
MinRK
aesthetics pass on AsyncResult.display_outputs...
r7239 if outputs:
_raw_text('[output:%i]' % eid)
MinRK
add AsyncResult.display_outputs...
r7040 for output in outputs:
self._republish_displaypub(output, eid)
# finally, add pyout:
for eid,r,pyout in zip(targets, results, pyouts):
if pyout is not None:
display(r)
else:
raise ValueError("groupby must be one of 'type', 'engine', 'collate', not %r" % groupby)
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589
Bernardo B. Marques
remove all trailling spaces
r4872
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 class AsyncMapResult(AsyncResult):
"""Class for representing results of non-blocking gathers.
Bernardo B. Marques
remove all trailling spaces
r4872
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 This will properly reconstruct the gather.
MinRK
add unordered iteration to AsyncMapResults...
r5171
This class is iterable at any time, and will wait on results as they come.
If ordered=False, then the first results to arrive will come first, otherwise
results will be yielded in the order they were submitted.
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 """
Bernardo B. Marques
remove all trailling spaces
r4872
MinRK
add unordered iteration to AsyncMapResults...
r5171 def __init__(self, client, msg_ids, mapObject, fname='', ordered=True):
MinRK
multitarget returns list instead of dict
r3596 AsyncResult.__init__(self, client, msg_ids, fname=fname)
MinRK
Improvements to dependency handling...
r3607 self._mapObject = mapObject
MinRK
add timeout for unmet dependencies in task scheduler
r3611 self._single_result = False
MinRK
add unordered iteration to AsyncMapResults...
r5171 self.ordered = ordered
Bernardo B. Marques
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r4872
MinRK
PendingResult->AsyncResult; match multiprocessing.AsyncResult api
r3589 def _reconstruct_result(self, res):
"""Perform the gather on the actual results."""
return self._mapObject.joinPartitions(res)
Bernardo B. Marques
remove all trailling spaces
r4872
MinRK
support iterating through map results as they arrive
r3627 # asynchronous iterator:
def __iter__(self):
MinRK
add unordered iteration to AsyncMapResults...
r5171 it = self._ordered_iter if self.ordered else self._unordered_iter
for r in it():
yield r
# asynchronous ordered iterator:
def _ordered_iter(self):
"""iterator for results *as they arrive*, preserving submission order."""
MinRK
support iterating through map results as they arrive
r3627 try:
rlist = self.get(0)
except error.TimeoutError:
# wait for each result individually
for msg_id in self.msg_ids:
ar = AsyncResult(self._client, msg_id, self._fname)
rlist = ar.get()
try:
for r in rlist:
yield r
except TypeError:
# flattened, not a list
# this could get broken by flattened data that returns iterables
# but most calls to map do not expose the `flatten` argument
yield rlist
else:
# already done
for r in rlist:
yield r
MinRK
split get_results into get_result/result_status, add AsyncHubResult
r3639
MinRK
add unordered iteration to AsyncMapResults...
r5171 # asynchronous unordered iterator:
def _unordered_iter(self):
"""iterator for results *as they arrive*, on FCFS basis, ignoring submission order."""
try:
rlist = self.get(0)
except error.TimeoutError:
pending = set(self.msg_ids)
while pending:
try:
self._client.wait(pending, 1e-3)
except error.TimeoutError:
# ignore timeout error, because that only means
# *some* jobs are outstanding
pass
# update ready set with those no longer outstanding:
ready = pending.difference(self._client.outstanding)
# update pending to exclude those that are finished
pending = pending.difference(ready)
while ready:
msg_id = ready.pop()
ar = AsyncResult(self._client, msg_id, self._fname)
rlist = ar.get()
try:
for r in rlist:
yield r
except TypeError:
# flattened, not a list
# this could get broken by flattened data that returns iterables
# but most calls to map do not expose the `flatten` argument
yield rlist
else:
# already done
for r in rlist:
yield r
MinRK
split get_results into get_result/result_status, add AsyncHubResult
r3639 class AsyncHubResult(AsyncResult):
MinRK
cleanup pass
r3644 """Class to wrap pending results that must be requested from the Hub.
Bernardo B. Marques
remove all trailling spaces
r4872
MinRK
cleanup pass
r3644 Note that waiting/polling on these objects requires polling the Hubover the network,
so use `AsyncHubResult.wait()` sparingly.
"""
Bernardo B. Marques
remove all trailling spaces
r4872
MinRK
better flush iopub with AsyncResults...
r8140 def _wait_for_outputs(self, timeout=-1):
MinRK
use idle status message to signal when outputs are complete
r7494 """no-op, because HubResults are never incomplete"""
MinRK
better flush iopub with AsyncResults...
r8140 self._outputs_ready = True
MinRK
use idle status message to signal when outputs are complete
r7494
MinRK
split get_results into get_result/result_status, add AsyncHubResult
r3639 def wait(self, timeout=-1):
"""wait for result to complete."""
start = time.time()
if self._ready:
return
local_ids = filter(lambda msg_id: msg_id in self._client.outstanding, self.msg_ids)
MinRK
update API after sagedays29...
r3664 local_ready = self._client.wait(local_ids, timeout)
MinRK
split get_results into get_result/result_status, add AsyncHubResult
r3639 if local_ready:
remote_ids = filter(lambda msg_id: msg_id not in self._client.results, self.msg_ids)
if not remote_ids:
self._ready = True
else:
rdict = self._client.result_status(remote_ids, status_only=False)
pending = rdict['pending']
MinRK
testing fixes
r3641 while pending and (timeout < 0 or time.time() < start+timeout):
MinRK
split get_results into get_result/result_status, add AsyncHubResult
r3639 rdict = self._client.result_status(remote_ids, status_only=False)
pending = rdict['pending']
if pending:
time.sleep(0.1)
if not pending:
self._ready = True
if self._ready:
try:
results = map(self._client.results.get, self.msg_ids)
self._result = results
if self._single_result:
r = results[0]
if isinstance(r, Exception):
raise r
else:
results = error.collect_exceptions(results, self._fname)
self._result = self._reconstruct_result(results)
Matthias BUSSONNIER
conform to pep 3110...
r7787 except Exception as e:
MinRK
split get_results into get_result/result_status, add AsyncHubResult
r3639 self._exception = e
self._success = False
else:
self._success = True
finally:
self._metadata = map(self._client.metadata.get, self.msg_ids)
Bernardo B. Marques
remove all trailling spaces
r4872
Matthias BUSSONNIER
conform to pep 3110...
r7787 __all__ = ['AsyncResult', 'AsyncMapResult', 'AsyncHubResult']