parallelmagic.py
343 lines
| 10.4 KiB
| text/x-python
|
PythonLexer
Brian Granger
|
r2312 | # encoding: utf-8 | ||
Pauli Virtanen
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r4888 | """ | ||
============= | ||||
parallelmagic | ||||
============= | ||||
Magic command interface for interactive parallel work. | ||||
Usage | ||||
===== | ||||
``%autopx`` | ||||
MinRK
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r7023 | {AUTOPX_DOC} | ||
Brian Granger
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r2312 | |||
Pauli Virtanen
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r4888 | ``%px`` | ||
MinRK
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r7023 | {PX_DOC} | ||
Pauli Virtanen
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r4888 | |||
``%result`` | ||||
MinRK
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r7023 | {RESULT_DOC} | ||
Pauli Virtanen
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r4888 | |||
""" | ||||
Brian Granger
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r2312 | |||
#----------------------------------------------------------------------------- | ||||
Fernando Perez
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r6955 | # Copyright (C) 2008 The IPython Development Team | ||
Brian Granger
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r2312 | # | ||
# Distributed under the terms of the BSD License. The full license is in | ||||
# the file COPYING, distributed as part of this software. | ||||
#----------------------------------------------------------------------------- | ||||
#----------------------------------------------------------------------------- | ||||
# Imports | ||||
#----------------------------------------------------------------------------- | ||||
MinRK
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r3689 | import ast | ||
import re | ||||
Brian Granger
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r2312 | |||
MinRK
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r7023 | from IPython.core.error import UsageError | ||
MinRK
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r7045 | from IPython.core.magic import Magics, magics_class, line_magic, cell_magic | ||
Thomas Kluyver
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r3886 | from IPython.testing.skipdoctest import skip_doctest | ||
Brian Granger
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r2312 | |||
#----------------------------------------------------------------------------- | ||||
# Definitions of magic functions for use with IPython | ||||
#----------------------------------------------------------------------------- | ||||
MinRK
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r7023 | |||
NO_ACTIVE_VIEW = "Use activate() on a DirectView object to use it with magics." | ||||
Brian Granger
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r2312 | |||
Fernando Perez
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r6973 | @magics_class | ||
Fernando Perez
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r6939 | class ParallelMagics(Magics): | ||
"""A set of magics useful when controlling a parallel IPython cluster. | ||||
""" | ||||
MinRK
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r7027 | |||
MinRK
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r7023 | # A flag showing if autopx is activated or not | ||
_autopx = False | ||||
# the current view used by the magics: | ||||
active_view = None | ||||
Brian Granger
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r2312 | |||
Thomas Kluyver
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r3886 | @skip_doctest | ||
Fernando Perez
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r6939 | @line_magic | ||
def result(self, parameter_s=''): | ||||
MinRK
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r7040 | """Print the result of command i on all engines. | ||
Brian Granger
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r2312 | |||
Bernardo B. Marques
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r4872 | To use this a :class:`DirectView` instance must be created | ||
Brian Granger
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r2312 | and then activated by calling its :meth:`activate` method. | ||
MinRK
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r7027 | |||
This lets you recall the results of %px computations after | ||||
asynchronous submission (view.block=False). | ||||
Brian Granger
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r2312 | |||
Then you can do the following:: | ||||
MinRK
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r7027 | In [23]: %px os.getpid() | ||
Async parallel execution on engine(s): all | ||||
MinRK
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r7023 | |||
MinRK
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r7027 | In [24]: %result | ||
[ 8] Out[10]: 60920 | ||||
[ 9] Out[10]: 60921 | ||||
[10] Out[10]: 60922 | ||||
[11] Out[10]: 60923 | ||||
Brian Granger
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r2312 | """ | ||
MinRK
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r7027 | |||
MinRK
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r3689 | if self.active_view is None: | ||
MinRK
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r7023 | raise UsageError(NO_ACTIVE_VIEW) | ||
MinRK
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r7027 | |||
stride = len(self.active_view) | ||||
Brian Granger
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r2312 | try: | ||
index = int(parameter_s) | ||||
except: | ||||
MinRK
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r7027 | index = -1 | ||
msg_ids = self.active_view.history[stride * index:(stride * (index + 1)) or None] | ||||
result = self.active_view.get_result(msg_ids) | ||||
result.get() | ||||
MinRK
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r7040 | result.display_outputs() | ||
Brian Granger
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r2312 | |||
Thomas Kluyver
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r3886 | @skip_doctest | ||
MinRK
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r7045 | @line_magic | ||
def px(self, parameter_s=''): | ||||
"""Executes the given python command in parallel. | ||||
To use this a :class:`DirectView` instance must be created | ||||
and then activated by calling its :meth:`activate` method. | ||||
Then you can do the following:: | ||||
In [24]: %px a = os.getpid() | ||||
Parallel execution on engine(s): all | ||||
In [25]: %px print a | ||||
[stdout:0] 1234 | ||||
[stdout:1] 1235 | ||||
[stdout:2] 1236 | ||||
[stdout:3] 1237 | ||||
""" | ||||
return self.parallel_execute(parameter_s) | ||||
def parallel_execute(self, cell, block=None, groupby='type'): | ||||
"""implementation used by %px and %%parallel""" | ||||
if self.active_view is None: | ||||
raise UsageError(NO_ACTIVE_VIEW) | ||||
# defaults: | ||||
block = self.active_view.block if block is None else block | ||||
base = "Parallel" if block else "Async parallel" | ||||
print base + " execution on engine(s): %s" % self.active_view.targets | ||||
result = self.active_view.execute(cell, silent=False, block=False) | ||||
if block: | ||||
result.get() | ||||
result.display_outputs(groupby) | ||||
MinRK
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r7051 | else: | ||
# return AsyncResult only on non-blocking submission | ||||
return result | ||||
MinRK
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r7045 | |||
@skip_doctest | ||||
MinRK
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r7050 | @cell_magic('px') | ||
def cell_px(self, line='', cell=None): | ||||
Brian Granger
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r2312 | """Executes the given python command in parallel. | ||
MinRK
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r7043 | |||
Cell magic usage: | ||||
%%px [-o] [-e] [--group-options=type|engine|order] [--[no]block] | ||||
Options (%%px cell magic only): | ||||
-o: collate outputs in oder (same as group-outputs=order) | ||||
-e: group outputs by engine (same as group-outputs=engine) | ||||
--group-outputs=type [default behavior]: | ||||
each output type (stdout, stderr, displaypub) for all engines | ||||
displayed together. | ||||
--group-outputs=order: | ||||
The same as 'type', but individual displaypub outputs (e.g. plots) | ||||
will be interleaved, so it will display all of the first plots, | ||||
then all of the second plots, etc. | ||||
--group-outputs=engine: | ||||
All of an engine's output is displayed before moving on to the next. | ||||
--[no]block: | ||||
Whether or not to block for the execution to complete | ||||
(and display the results). If unspecified, the active view's | ||||
Bernardo B. Marques
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r4872 | To use this a :class:`DirectView` instance must be created | ||
Brian Granger
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r2312 | and then activated by calling its :meth:`activate` method. | ||
Bernardo B. Marques
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r4872 | |||
Brian Granger
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r2312 | Then you can do the following:: | ||
MinRK
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r7045 | In [24]: %%parallel --noblock a = os.getpid() | ||
Async parallel execution on engine(s): all | ||||
MinRK
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r7023 | |||
In [25]: %px print a | ||||
[stdout:0] 1234 | ||||
[stdout:1] 1235 | ||||
[stdout:2] 1236 | ||||
[stdout:3] 1237 | ||||
Brian Granger
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r2312 | """ | ||
MinRK
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r7027 | |||
MinRK
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r7045 | block = None | ||
MinRK
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r7042 | groupby = 'type' | ||
MinRK
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r7045 | # as a cell magic, we accept args | ||
opts, _ = self.parse_options(line, 'oe', 'group-outputs=', 'block', 'noblock') | ||||
if 'group-outputs' in opts: | ||||
groupby = opts['group-outputs'] | ||||
elif 'o' in opts: | ||||
groupby = 'order' | ||||
elif 'e' in opts: | ||||
groupby = 'engine' | ||||
MinRK
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r7042 | |||
MinRK
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r7045 | if 'block' in opts: | ||
block = True | ||||
elif 'noblock' in opts: | ||||
block = False | ||||
MinRK
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r7042 | |||
MinRK
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r7045 | return self.parallel_execute(cell, block=block, groupby=groupby) | ||
Brian Granger
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r2312 | |||
Thomas Kluyver
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r3886 | @skip_doctest | ||
Fernando Perez
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r6939 | @line_magic | ||
def autopx(self, parameter_s=''): | ||||
Brian Granger
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r2312 | """Toggles auto parallel mode. | ||
Bernardo B. Marques
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r4872 | To use this a :class:`DirectView` instance must be created | ||
Brian Granger
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r2312 | and then activated by calling its :meth:`activate` method. Once this | ||
is called, all commands typed at the command line are send to | ||||
the engines to be executed in parallel. To control which engine | ||||
are used, set the ``targets`` attributed of the multiengine client | ||||
before entering ``%autopx`` mode. | ||||
Then you can do the following:: | ||||
In [25]: %autopx | ||||
%autopx to enabled | ||||
In [26]: a = 10 | ||||
MinRK
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r3997 | Parallel execution on engine(s): [0,1,2,3] | ||
MinRK
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r3736 | In [27]: print a | ||
MinRK
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r3997 | Parallel execution on engine(s): [0,1,2,3] | ||
MinRK
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r3736 | [stdout:0] 10 | ||
[stdout:1] 10 | ||||
[stdout:2] 10 | ||||
[stdout:3] 10 | ||||
Brian Granger
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r2312 | |||
In [27]: %autopx | ||||
%autopx disabled | ||||
""" | ||||
MinRK
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r7023 | if self._autopx: | ||
Brian Granger
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r2312 | self._disable_autopx() | ||
else: | ||||
self._enable_autopx() | ||||
def _enable_autopx(self): | ||||
Bernardo B. Marques
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r4872 | """Enable %autopx mode by saving the original run_cell and installing | ||
MinRK
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r3689 | pxrun_cell. | ||
Brian Granger
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r2312 | """ | ||
MinRK
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r3689 | if self.active_view is None: | ||
MinRK
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r7023 | raise UsageError(NO_ACTIVE_VIEW) | ||
Brian Granger
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r2312 | |||
MinRK
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r7023 | # override run_cell | ||
MinRK
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r3689 | self._original_run_cell = self.shell.run_cell | ||
MinRK
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r3735 | self.shell.run_cell = self.pxrun_cell | ||
MinRK
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r7023 | self._autopx = True | ||
Brian Granger
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r2312 | print "%autopx enabled" | ||
Bernardo B. Marques
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r4872 | |||
Brian Granger
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r2312 | def _disable_autopx(self): | ||
MinRK
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r3689 | """Disable %autopx by restoring the original InteractiveShell.run_cell. | ||
Fernando Perez
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r3096 | """ | ||
MinRK
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r7023 | if self._autopx: | ||
MinRK
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r3689 | self.shell.run_cell = self._original_run_cell | ||
MinRK
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r7023 | self._autopx = False | ||
Brian Granger
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r2312 | print "%autopx disabled" | ||
MinRK
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r6878 | def pxrun_cell(self, raw_cell, store_history=False, silent=False): | ||
MinRK
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r3689 | """drop-in replacement for InteractiveShell.run_cell. | ||
Bernardo B. Marques
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r4872 | |||
MinRK
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r3689 | This executes code remotely, instead of in the local namespace. | ||
MinRK
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r3735 | |||
See InteractiveShell.run_cell for details. | ||||
MinRK
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r3689 | """ | ||
Bernardo B. Marques
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r4872 | |||
MinRK
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r3738 | if (not raw_cell) or raw_cell.isspace(): | ||
return | ||||
Bernardo B. Marques
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r4872 | |||
MinRK
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r3735 | ipself = self.shell | ||
Bernardo B. Marques
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r4872 | |||
MinRK
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r3689 | with ipself.builtin_trap: | ||
MinRK
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r3738 | cell = ipself.prefilter_manager.prefilter_lines(raw_cell) | ||
Bernardo B. Marques
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r4872 | |||
MinRK
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r3689 | # Store raw and processed history | ||
if store_history: | ||||
Bernardo B. Marques
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r4872 | ipself.history_manager.store_inputs(ipself.execution_count, | ||
MinRK
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r3689 | cell, raw_cell) | ||
Brian Granger
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r3239 | |||
MinRK
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r3689 | # ipself.logger.log(cell, raw_cell) | ||
Bernardo B. Marques
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r4872 | |||
MinRK
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r3689 | cell_name = ipself.compile.cache(cell, ipself.execution_count) | ||
Bernardo B. Marques
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r4872 | |||
MinRK
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r3689 | try: | ||
Fernando Perez
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r6955 | ast.parse(cell, filename=cell_name) | ||
except (OverflowError, SyntaxError, ValueError, TypeError, | ||||
MemoryError): | ||||
MinRK
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r3689 | # Case 1 | ||
ipself.showsyntaxerror() | ||||
ipself.execution_count += 1 | ||||
return None | ||||
except NameError: | ||||
MinRK
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r3735 | # ignore name errors, because we don't know the remote keys | ||
MinRK
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r3689 | pass | ||
if store_history: | ||||
# Write output to the database. Does nothing unless | ||||
# history output logging is enabled. | ||||
ipself.history_manager.store_output(ipself.execution_count) | ||||
# Each cell is a *single* input, regardless of how many lines it has | ||||
ipself.execution_count += 1 | ||||
MinRK
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r5364 | if re.search(r'get_ipython\(\)\.magic\(u?["\']%?autopx', cell): | ||
Brian Granger
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r2312 | self._disable_autopx() | ||
return False | ||||
else: | ||||
try: | ||||
MinRK
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r6878 | result = self.active_view.execute(cell, silent=False, block=False) | ||
Brian Granger
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r2312 | except: | ||
ipself.showtraceback() | ||||
MinRK
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r3736 | return True | ||
MinRK
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r3735 | else: | ||
MinRK
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r3736 | if self.active_view.block: | ||
try: | ||||
result.get() | ||||
except: | ||||
self.shell.showtraceback() | ||||
return True | ||||
else: | ||||
MinRK
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r7052 | with ipself.builtin_trap: | ||
result.display_outputs() | ||||
MinRK
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r3736 | return False | ||
MinRK
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r3735 | |||
MinRK
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r7023 | __doc__ = __doc__.format( | ||
AUTOPX_DOC = ' '*8 + ParallelMagics.autopx.__doc__, | ||||
PX_DOC = ' '*8 + ParallelMagics.px.__doc__, | ||||
RESULT_DOC = ' '*8 + ParallelMagics.result.__doc__ | ||||
) | ||||
Brian Granger
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r2312 | |||
_loaded = False | ||||
def load_ipython_extension(ip): | ||||
"""Load the extension in IPython.""" | ||||
global _loaded | ||||
if not _loaded: | ||||
Fernando Perez
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r6955 | ip.register_magics(ParallelMagics) | ||
Brian Granger
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r2312 | _loaded = True | ||