##// END OF EJS Templates
Merge pull request #7417 from Carreau/logominpad...
Merge pull request #7417 from Carreau/logominpad rework css media-query (and lots of css fixes)

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filemanager.py
472 lines | 16.1 KiB | text/x-python | PythonLexer
MinRK
rename notebooks service to contents service...
r17524 """A contents manager that uses the local file system for storage."""
Brian E. Granger
More review changes....
r4609
MinRK
add utils.path.ensure_dir_exists...
r16486 # Copyright (c) IPython Development Team.
# Distributed under the terms of the Modified BSD License.
Brian E. Granger
Massive work on the notebook document format....
r4484
Scott Sanderson
DEV: Separate FileCheckpointManager and GenericFileCheckpointManager....
r19838
Thomas Kluyver
Save notebook as script using unicode file handle....
r6030 import io
Brian E. Granger
Massive work on the notebook document format....
r4484 import os
MinRK
add checkpoint API to FileNBManager
r10497 import shutil
Thomas Kluyver
Loading a file works
r19011 import mimetypes
Zachary Sailer
manual rebase notebooks web services
r12984
Brian E. Granger
Massive work on the notebook document format....
r4484 from tornado import web
Scott Sanderson
STY: s/CheckpointManager/Checkpoints...
r19839 from .filecheckpoints import FileCheckpoints
Scott Sanderson
DEV: Separate FileCheckpointManager and GenericFileCheckpointManager....
r19838 from .fileio import FileManagerMixin
from .manager import ContentsManager
MinRK
don't use nbformat.current in IPython.html...
r18607 from IPython import nbformat
Min RK
add pre/post-save hooks...
r19299 from IPython.utils.importstring import import_item
from IPython.utils.traitlets import Any, Unicode, Bool, TraitError
Scott Sanderson
DEV: Separate FileCheckpointManager and GenericFileCheckpointManager....
r19838 from IPython.utils.py3compat import getcwd, string_types
MinRK
add timezone info to `last_modified` in notebook managers...
r11145 from IPython.utils import tz
Scott Sanderson
DEV: Refactor checkpoint logic from FileContentsManager....
r19727 from IPython.html.utils import (
is_hidden,
to_api_path,
)
Brian E. Granger
Massive work on the notebook document format....
r4484
Min RK
`--script` triggers post_save hook with nbconvert
r19300 _script_exporter = None
Min RK
update `--script` behavior to use `nbconvert --to script`
r19301
Scott Sanderson
DEV: Separate FileCheckpointManager and GenericFileCheckpointManager....
r19838
Min RK
`--script` triggers post_save hook with nbconvert
r19300 def _post_save_script(model, os_path, contents_manager, **kwargs):
"""convert notebooks to Python script after save with nbconvert
replaces `ipython notebook --script`
"""
Min RK
update `--script` behavior to use `nbconvert --to script`
r19301 from IPython.nbconvert.exporters.script import ScriptExporter
Min RK
`--script` triggers post_save hook with nbconvert
r19300
if model['type'] != 'notebook':
return
Min RK
update `--script` behavior to use `nbconvert --to script`
r19301
Min RK
`--script` triggers post_save hook with nbconvert
r19300 global _script_exporter
if _script_exporter is None:
Min RK
update `--script` behavior to use `nbconvert --to script`
r19301 _script_exporter = ScriptExporter(parent=contents_manager)
Min RK
`--script` triggers post_save hook with nbconvert
r19300 log = contents_manager.log
base, ext = os.path.splitext(os_path)
py_fname = base + '.py'
Min RK
update `--script` behavior to use `nbconvert --to script`
r19301 script, resources = _script_exporter.from_filename(os_path)
script_fname = base + resources.get('output_extension', '.txt')
log.info("Saving script /%s", to_api_path(script_fname, contents_manager.root_dir))
with io.open(script_fname, 'w', encoding='utf-8') as f:
f.write(script)
Brian E. Granger
Massive work on the notebook document format....
r4484
MinRK
mv services/notebooks services/contents
r17523
Scott Sanderson
DEV: Refactor checkpoint logic from FileContentsManager....
r19727 class FileContentsManager(FileManagerMixin, ContentsManager):
root_dir = Unicode(config=True)
def _root_dir_default(self):
try:
return self.parent.notebook_dir
except AttributeError:
return getcwd()
save_script = Bool(False, config=True, help='DEPRECATED, use post_save_hook')
def _save_script_changed(self):
self.log.warn("""
`--script` is deprecated. You can trigger nbconvert via pre- or post-save hooks:
ContentsManager.pre_save_hook
FileContentsManager.post_save_hook
A post-save hook has been registered that calls:
ipython nbconvert --to script [notebook]
which behaves similarly to `--script`.
""")
self.post_save_hook = _post_save_script
post_save_hook = Any(None, config=True,
help="""Python callable or importstring thereof
to be called on the path of a file just saved.
This can be used to process the file on disk,
such as converting the notebook to a script or HTML via nbconvert.
It will be called as (all arguments passed by keyword):
hook(os_path=os_path, model=model, contents_manager=instance)
path: the filesystem path to the file just written
model: the model representing the file
contents_manager: this ContentsManager instance
"""
)
def _post_save_hook_changed(self, name, old, new):
if new and isinstance(new, string_types):
self.post_save_hook = import_item(self.post_save_hook)
elif new:
if not callable(new):
raise TraitError("post_save_hook must be callable")
def run_post_save_hook(self, model, os_path):
"""Run the post-save hook if defined, and log errors"""
if self.post_save_hook:
try:
self.log.debug("Running post-save hook on %s", os_path)
self.post_save_hook(os_path=os_path, model=model, contents_manager=self)
except Exception:
self.log.error("Post-save hook failed on %s", os_path, exc_info=True)
def _root_dir_changed(self, name, old, new):
"""Do a bit of validation of the root_dir."""
if not os.path.isabs(new):
# If we receive a non-absolute path, make it absolute.
self.root_dir = os.path.abspath(new)
return
if not os.path.isdir(new):
raise TraitError("%r is not a directory" % new)
Scott Sanderson
STY: s/CheckpointManager/Checkpoints...
r19839 def _checkpoints_class_default(self):
return FileCheckpoints
Scott Sanderson
DEV: Refactor checkpoint logic from FileContentsManager....
r19727
Scott Sanderson
DEV: More checkpoint API refactoring....
r19747 def is_hidden(self, path):
"""Does the API style path correspond to a hidden directory or file?
Parameters
----------
path : string
The path to check. This is an API path (`/` separated,
relative to root_dir).
Returns
-------
hidden : bool
Whether the path exists and is hidden.
"""
path = path.strip('/')
os_path = self._get_os_path(path=path)
return is_hidden(os_path, self.root_dir)
def file_exists(self, path):
"""Returns True if the file exists, else returns False.
API-style wrapper for os.path.isfile
Parameters
----------
path : string
The relative path to the file (with '/' as separator)
Returns
-------
exists : bool
Whether the file exists.
"""
path = path.strip('/')
os_path = self._get_os_path(path)
return os.path.isfile(os_path)
def dir_exists(self, path):
"""Does the API-style path refer to an extant directory?
API-style wrapper for os.path.isdir
Parameters
----------
path : string
The path to check. This is an API path (`/` separated,
relative to root_dir).
Returns
-------
exists : bool
Whether the path is indeed a directory.
"""
path = path.strip('/')
os_path = self._get_os_path(path=path)
return os.path.isdir(os_path)
def exists(self, path):
"""Returns True if the path exists, else returns False.
API-style wrapper for os.path.exists
Parameters
----------
path : string
The API path to the file (with '/' as separator)
Returns
-------
exists : bool
Whether the target exists.
"""
path = path.strip('/')
os_path = self._get_os_path(path=path)
return os.path.exists(os_path)
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 def _base_model(self, path):
MinRK
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r17525 """Build the common base of a contents model"""
MinRK
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r18749 os_path = self._get_os_path(path)
Brian E. Granger
Server side logic for directories.
r15069 info = os.stat(os_path)
last_modified = tz.utcfromtimestamp(info.st_mtime)
created = tz.utcfromtimestamp(info.st_ctime)
MinRK
contents service review...
r17529 # Create the base model.
MinRK
teach contents service about non-notebook files
r17525 model = {}
MinRK
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r18749 model['name'] = path.rsplit('/', 1)[-1]
Brian E. Granger
Server side logic for directories.
r15069 model['path'] = path
model['last_modified'] = last_modified
model['created'] = created
MinRK
teach contents service about non-notebook files
r17525 model['content'] = None
model['format'] = None
Thomas Kluyver
Loading a file works
r19011 model['mimetype'] = None
Min RK
handle various permission failures...
r19005 try:
model['writable'] = os.access(os_path, os.W_OK)
except OSError:
self.log.error("Failed to check write permissions on %s", os_path)
model['writable'] = False
MinRK
teach contents service about non-notebook files
r17525 return model
MinRK
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r18749 def _dir_model(self, path, content=True):
MinRK
teach contents service about non-notebook files
r17525 """Build a model for a directory
if content is requested, will include a listing of the directory
"""
MinRK
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r18749 os_path = self._get_os_path(path)
MinRK
teach contents service about non-notebook files
r17525
Min RK
handle various permission failures...
r19005 four_o_four = u'directory does not exist: %r' % path
MinRK
update contents per further review...
r17537
MinRK
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r17525 if not os.path.isdir(os_path):
MinRK
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r17537 raise web.HTTPError(404, four_o_four)
MinRK
teach contents service about non-notebook files
r17525 elif is_hidden(os_path, self.root_dir):
MinRK
update contents per further review...
r17537 self.log.info("Refusing to serve hidden directory %r, via 404 Error",
os_path
)
raise web.HTTPError(404, four_o_four)
MinRK
teach contents service about non-notebook files
r17525
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 model = self._base_model(path)
Brian E. Granger
Server side logic for directories.
r15069 model['type'] = 'directory'
MinRK
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r17525 if content:
MinRK
contents service review...
r17529 model['content'] = contents = []
Min RK
address review in contents service...
r18758 os_dir = self._get_os_path(path)
for name in os.listdir(os_dir):
os_path = os.path.join(os_dir, name)
MinRK
fix directory listing with broken symlinks...
r17710 # skip over broken symlinks in listing
if not os.path.exists(os_path):
self.log.warn("%s doesn't exist", os_path)
continue
Min RK
address review in contents service...
r18758 elif not os.path.isfile(os_path) and not os.path.isdir(os_path):
self.log.debug("%s not a regular file", os_path)
continue
MinRK
teach contents service about non-notebook files
r17525 if self.should_list(name) and not is_hidden(os_path, self.root_dir):
Thomas Kluyver
Rename get_model() to get()
r18791 contents.append(self.get(
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 path='%s/%s' % (path, name),
content=False)
)
MinRK
teach contents service about non-notebook files
r17525
MinRK
add support and tests for uploading and saving regular files
r17527 model['format'] = 'json'
MinRK
teach contents service about non-notebook files
r17525
Brian E. Granger
Server side logic for directories.
r15069 return model
Thomas Kluyver
Allow specifying format when getting files from contents API
r18788 def _file_model(self, path, content=True, format=None):
MinRK
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r17525 """Build a model for a file
MinRK
mv services/notebooks services/contents
r17523
MinRK
teach contents service about non-notebook files
r17525 if content is requested, include the file contents.
Thomas Kluyver
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r18788
format:
If 'text', the contents will be decoded as UTF-8.
If 'base64', the raw bytes contents will be encoded as base64.
If not specified, try to decode as UTF-8, and fall back to base64
MinRK
teach contents service about non-notebook files
r17525 """
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 model = self._base_model(path)
MinRK
teach contents service about non-notebook files
r17525 model['type'] = 'file'
Thomas Kluyver
Loading a file works
r19011
os_path = self._get_os_path(path)
MinRK
teach contents service about non-notebook files
r17525 if content:
Scott Sanderson
DEV: Add full support for non-notebook checkpoints.
r19786 content, format = self._read_file(os_path, format)
default_mime = {
'text': 'text/plain',
'base64': 'application/octet-stream'
}[format]
model.update(
content=content,
format=format,
mimetype=mimetypes.guess_type(os_path)[0] or default_mime,
)
Thomas Kluyver
Allow specifying format when getting files from contents API
r18788
MinRK
teach contents service about non-notebook files
r17525 return model
MinRK
mv services/notebooks services/contents
r17523
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 def _notebook_model(self, path, content=True):
MinRK
teach contents service about non-notebook files
r17525 """Build a notebook model
if content is requested, the notebook content will be populated
as a JSON structure (not double-serialized)
Zachary Sailer
Code review changes....
r13048 """
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 model = self._base_model(path)
MinRK
teach contents service about non-notebook files
r17525 model['type'] = 'notebook'
if content:
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 os_path = self._get_os_path(path)
Scott Sanderson
DEV: More checkpoint API refactoring....
r19747 nb = self._read_notebook(os_path, as_version=4)
MinRK
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r18749 self.mark_trusted_cells(nb, path)
MinRK
teach contents service about non-notebook files
r17525 model['content'] = nb
model['format'] = 'json'
MinRK
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r18249 self.validate_notebook_model(model)
MinRK
teach contents service about non-notebook files
r17525 return model
Zachary Sailer
refactoring of nbmanager and filenbmanager...
r13046
Min RK
ContentsManager type kwarg to match model key...
r19391 def get(self, path, content=True, type=None, format=None):
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 """ Takes a path for an entity and returns its model
MinRK
mv services/notebooks services/contents
r17523
Zachary Sailer
Code review changes....
r13048 Parameters
----------
path : str
MinRK
updates per review...
r17535 the API path that describes the relative path for the target
Thomas Kluyver
Add type parameter for contents GET requests
r18781 content : bool
Whether to include the contents in the reply
Min RK
ContentsManager type kwarg to match model key...
r19391 type : str, optional
Thomas Kluyver
Add type parameter for contents GET requests
r18781 The requested type - 'file', 'notebook', or 'directory'.
Thomas Kluyver
Fix various review comments
r18790 Will raise HTTPError 400 if the content doesn't match.
Thomas Kluyver
Allow specifying format when getting files from contents API
r18788 format : str, optional
The requested format for file contents. 'text' or 'base64'.
Ignored if this returns a notebook or directory model.
MinRK
mv services/notebooks services/contents
r17523
Zachary Sailer
Code review changes....
r13048 Returns
-------
model : dict
MinRK
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r17525 the contents model. If content=True, returns the contents
of the file or directory as well.
Zachary Sailer
Code review changes....
r13048 """
MinRK
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r13078 path = path.strip('/')
MinRK
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r17525
MinRK
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r18749 if not self.exists(path):
raise web.HTTPError(404, u'No such file or directory: %s' % path)
MinRK
teach contents service about non-notebook files
r17525
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 os_path = self._get_os_path(path)
MinRK
teach contents service about non-notebook files
r17525 if os.path.isdir(os_path):
Min RK
ContentsManager type kwarg to match model key...
r19391 if type not in (None, 'directory'):
Thomas Kluyver
Add type parameter for contents GET requests
r18781 raise web.HTTPError(400,
Min RK
ContentsManager type kwarg to match model key...
r19391 u'%s is a directory, not a %s' % (path, type), reason='bad type')
MinRK
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r18749 model = self._dir_model(path, content=content)
Min RK
ContentsManager type kwarg to match model key...
r19391 elif type == 'notebook' or (type is None and path.endswith('.ipynb')):
MinRK
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r18749 model = self._notebook_model(path, content=content)
MinRK
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r17525 else:
Min RK
ContentsManager type kwarg to match model key...
r19391 if type == 'directory':
Thomas Kluyver
Add type parameter for contents GET requests
r18781 raise web.HTTPError(400,
Min RK
redirect /edit/ to /files/ if not (utf8) text
r19337 u'%s is not a directory', reason='bad type')
Thomas Kluyver
Allow specifying format when getting files from contents API
r18788 model = self._file_model(path, content=content, format=format)
Zachary Sailer
refactoring of nbmanager and filenbmanager...
r13046 return model
Zachary Sailer
Add 'patch' to session & notebook, rename working
r12997
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 def _save_directory(self, os_path, model, path=''):
MinRK
contents service review...
r17529 """create a directory"""
MinRK
update contents per further review...
r17537 if is_hidden(os_path, self.root_dir):
raise web.HTTPError(400, u'Cannot create hidden directory %r' % os_path)
MinRK
add support and tests for uploading and saving regular files
r17527 if not os.path.exists(os_path):
Min RK
handle various permission failures...
r19005 with self.perm_to_403():
os.mkdir(os_path)
MinRK
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r17527 elif not os.path.isdir(os_path):
raise web.HTTPError(400, u'Not a directory: %s' % (os_path))
MinRK
update contents per further review...
r17537 else:
self.log.debug("Directory %r already exists", os_path)
MinRK
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r17527
MinRK
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r18749 def save(self, model, path=''):
MinRK
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r17527 """Save the file model and return the model with no content."""
MinRK
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r13078 path = path.strip('/')
Zachary Sailer
refactoring of nbmanager and filenbmanager...
r13046
MinRK
add support and tests for uploading and saving regular files
r17527 if 'type' not in model:
raise web.HTTPError(400, u'No file type provided')
MinRK
updates per review...
r17532 if 'content' not in model and model['type'] != 'directory':
raise web.HTTPError(400, u'No file content provided')
Brian E. Granger
Addressing review comments....
r15093
Min RK
add pre/post-save hooks...
r19299 self.run_pre_save_hook(model=model, path=path)
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 os_path = self._get_os_path(path)
MinRK
add support and tests for uploading and saving regular files
r17527 self.log.debug("Saving %s", os_path)
Brian E. Granger
Massive work on the notebook document format....
r4484 try:
MinRK
add support and tests for uploading and saving regular files
r17527 if model['type'] == 'notebook':
Scott Sanderson
DEV: Add full support for non-notebook checkpoints.
r19786 nb = nbformat.from_dict(model['content'])
self.check_and_sign(nb, path)
self._save_notebook(os_path, nb)
# One checkpoint should always exist for notebooks.
Scott Sanderson
STY: s/CheckpointManager/Checkpoints...
r19839 if not self.checkpoints.list_checkpoints(path):
Scott Sanderson
DEV: Allow CheckpointManagers to optimize for shared backends....
r19828 self.create_checkpoint(path)
MinRK
add support and tests for uploading and saving regular files
r17527 elif model['type'] == 'file':
Scott Sanderson
DEV: Add full support for non-notebook checkpoints.
r19786 # Missing format will be handled internally by _save_file.
self._save_file(os_path, model['content'], model.get('format'))
MinRK
add support and tests for uploading and saving regular files
r17527 elif model['type'] == 'directory':
MinRK
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r18749 self._save_directory(os_path, model, path)
MinRK
add support and tests for uploading and saving regular files
r17527 else:
raise web.HTTPError(400, "Unhandled contents type: %s" % model['type'])
except web.HTTPError:
raise
MinRK
include error in 'Unexpected error' message.
r5709 except Exception as e:
Min RK
handle various permission failures...
r19005 self.log.error(u'Error while saving file: %s %s', path, e, exc_info=True)
raise web.HTTPError(500, u'Unexpected error while saving file: %s %s' % (path, e))
Brian Granger
Refactoring notebook managers and adding Azure backed storage....
r8180
MinRK
add dialogs for failed save/load...
r18249 validation_message = None
if model['type'] == 'notebook':
self.validate_notebook_model(model)
validation_message = model.get('message', None)
Thomas Kluyver
Rename get_model() to get()
r18791 model = self.get(path, content=False)
MinRK
add dialogs for failed save/load...
r18249 if validation_message:
model['message'] = validation_message
Min RK
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r19299
self.run_post_save_hook(model=model, os_path=os_path)
Zachary Sailer
refactoring of nbmanager and filenbmanager...
r13046 return model
Scott Sanderson
DEV: Refactor checkpoint logic from FileContentsManager....
r19727 def delete_file(self, path):
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r18749 """Delete file at path."""
MinRK
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r13078 path = path.strip('/')
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r18749 os_path = self._get_os_path(path)
MinRK
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r17530 rm = os.unlink
if os.path.isdir(os_path):
listing = os.listdir(os_path)
Scott Sanderson
DEV: Refactor checkpoint logic from FileContentsManager....
r19727 # Don't delete non-empty directories.
# A directory containing only leftover checkpoints is
# considered empty.
Scott Sanderson
STY: s/CheckpointManager/Checkpoints...
r19839 cp_dir = getattr(self.checkpoints, 'checkpoint_dir', None)
Scott Sanderson
DEV: Refactor checkpoint logic from FileContentsManager....
r19727 for entry in listing:
if entry != cp_dir:
raise web.HTTPError(400, u'Directory %s not empty' % os_path)
MinRK
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r17530 elif not os.path.isfile(os_path):
MinRK
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r17524 raise web.HTTPError(404, u'File does not exist: %s' % os_path)
MinRK
mv services/notebooks services/contents
r17523
MinRK
support deleting empty directories...
r17530 if os.path.isdir(os_path):
self.log.debug("Removing directory %s", os_path)
Min RK
handle various permission failures...
r19005 with self.perm_to_403():
shutil.rmtree(os_path)
MinRK
support deleting empty directories...
r17530 else:
self.log.debug("Unlinking file %s", os_path)
Min RK
handle various permission failures...
r19005 with self.perm_to_403():
rm(os_path)
Brian E. Granger
Massive work on the notebook document format....
r4484
Scott Sanderson
DEV: Refactor checkpoint logic from FileContentsManager....
r19727 def rename_file(self, old_path, new_path):
MinRK
rename notebooks service to contents service...
r17524 """Rename a file."""
MinRK
ensure 'path' never has leading or trailing slash in nbmanager...
r13078 old_path = old_path.strip('/')
new_path = new_path.strip('/')
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 if new_path == old_path:
Zachary Sailer
refactoring of nbmanager and filenbmanager...
r13046 return
MinRK
mv services/notebooks services/contents
r17523
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 new_os_path = self._get_os_path(new_path)
old_os_path = self._get_os_path(old_path)
Zachary Sailer
refactoring of nbmanager and filenbmanager...
r13046
# Should we proceed with the move?
Min RK
address review in contents service...
r18758 if os.path.exists(new_os_path):
raise web.HTTPError(409, u'File already exists: %s' % new_path)
Zachary Sailer
refactoring of nbmanager and filenbmanager...
r13046
MinRK
rename notebooks service to contents service...
r17524 # Move the file
Zachary Sailer
refactoring of nbmanager and filenbmanager...
r13046 try:
Min RK
handle various permission failures...
r19005 with self.perm_to_403():
shutil.move(old_os_path, new_os_path)
except web.HTTPError:
raise
Brian E. Granger
Review and refactoring of notebooks web service.
r13051 except Exception as e:
Min RK
address review in contents service...
r18758 raise web.HTTPError(500, u'Unknown error renaming file: %s %s' % (old_path, e))
Zachary Sailer
refactoring of nbmanager and filenbmanager...
r13046
Paul Ivanov
print info string on interrupt, log it on startup
r10019 def info_string(self):
MinRK
rename notebooks service to contents service...
r17524 return "Serving notebooks from local directory: %s" % self.root_dir
Dale Jung
API: Allow NotebookManagers to control kernel startup dir. #5468
r16052
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 def get_kernel_path(self, path, model=None):
Matthias Bussonnier
return API path instead of filesystem
r19093 """Return the initial API path of a kernel associated with a given notebook"""
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 if '/' in path:
Min RK
address review in contents service...
r18758 parent_dir = path.rsplit('/', 1)[0]
MinRK
Remove separate 'path', 'name' in Contents API...
r18749 else:
Min RK
address review in contents service...
r18758 parent_dir = ''
Matthias Bussonnier
return API path instead of filesystem
r19093 return parent_dir