##// END OF EJS Templates
finish plumbing config to Session objects...
finish plumbing config to Session objects This means that the qtconsole now has full access to HMAC message digests and non-JSON serialization (pickle, msgpack, etc.).

File last commit:

r4011:a016cea1
r4015:82222c30
Show More
streamkernel.py
422 lines | 15.5 KiB | text/x-python | PythonLexer
MinRK
prep newparallel for rebase...
r3539 #!/usr/bin/env python
"""
Kernel adapted from kernel.py to use ZMQ Streams
"""
MinRK
copyright statements
r3660 #-----------------------------------------------------------------------------
# Copyright (C) 2010-2011 The IPython Development Team
#
# Distributed under the terms of the BSD License. The full license is in
# the file COPYING, distributed as part of this software.
#-----------------------------------------------------------------------------
MinRK
prep newparallel for rebase...
r3539
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 #-----------------------------------------------------------------------------
# Imports
#-----------------------------------------------------------------------------
# Standard library imports.
MinRK
use print_function
r3553 from __future__ import print_function
MinRK
resort imports in a cleaner order
r3631
MinRK
prep newparallel for rebase...
r3539 import sys
import time
MinRK
resort imports in a cleaner order
r3631
from code import CommandCompiler
MinRK
add timestamps all messages; fix reply on wrong channel bug.
r3578 from datetime import datetime
MinRK
control channel progress
r3540 from pprint import pprint
MinRK
prep newparallel for rebase...
r3539
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 # System library imports.
MinRK
prep newparallel for rebase...
r3539 import zmq
from zmq.eventloop import ioloop, zmqstream
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 # Local imports.
MinRK
cleanup parallel traits...
r3988 from IPython.utils.traitlets import Instance, List, Int, Dict, Set, Unicode
MinRK
added dependency decorator
r3546 from IPython.zmq.completer import KernelCompleter
MinRK
propagate iopub to clients
r3602
MinRK
organize IPython.parallel into subpackages
r3673 from IPython.parallel.error import wrap_exception
from IPython.parallel.factory import SessionFactory
MinRK
merge IPython.parallel.streamsession into IPython.zmq.session...
r4006 from IPython.parallel.util import serialize_object, unpack_apply_message
MinRK
prep newparallel for rebase...
r3539
MinRK
control channel progress
r3540 def printer(*args):
MinRK
propagate iopub to clients
r3602 pprint(args, stream=sys.__stdout__)
MinRK
control channel progress
r3540
MinRK
Refactor newparallel to use Config system...
r3604
MinRK
add '-s' for startup script in ipengine...
r3684 class _Passer(zmqstream.ZMQStream):
"""Empty class that implements `send()` that does nothing.
MinRK
merge IPython.parallel.streamsession into IPython.zmq.session...
r4006 Subclass ZMQStream for Session typechecking
MinRK
add '-s' for startup script in ipengine...
r3684
"""
def __init__(self, *args, **kwargs):
pass
MinRK
Refactor newparallel to use Config system...
r3604 def send(self, *args, **kwargs):
pass
send_multipart = send
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 #-----------------------------------------------------------------------------
# Main kernel class
#-----------------------------------------------------------------------------
MinRK
prep newparallel for rebase...
r3539
MinRK
Refactor newparallel to use Config system...
r3604 class Kernel(SessionFactory):
MinRK
prep newparallel for rebase...
r3539
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 #---------------------------------------------------------------------------
# Kernel interface
#---------------------------------------------------------------------------
MinRK
Refactor newparallel to use Config system...
r3604
# kwargs:
MinRK
cleanup parallel traits...
r3988 exec_lines = List(Unicode, config=True,
MinRK
all ipcluster scripts in some degree of working order with new config
r3985 help="List of lines to execute")
int_id = Int(-1)
user_ns = Dict(config=True, help="""Set the user's namespace of the Kernel""")
MinRK
Refactor newparallel to use Config system...
r3604
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 control_stream = Instance(zmqstream.ZMQStream)
task_stream = Instance(zmqstream.ZMQStream)
iopub_stream = Instance(zmqstream.ZMQStream)
MinRK
organize IPython.parallel into subpackages
r3673 client = Instance('IPython.parallel.Client')
MinRK
Refactor newparallel to use Config system...
r3604
# internals
shell_streams = List()
compiler = Instance(CommandCompiler, (), {})
completer = Instance(KernelCompleter)
aborted = Set()
shell_handlers = Dict()
control_handlers = Dict()
def _set_prefix(self):
self.prefix = "engine.%s"%self.int_id
def _connect_completer(self):
self.completer = KernelCompleter(self.user_ns)
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569
def __init__(self, **kwargs):
super(Kernel, self).__init__(**kwargs)
MinRK
Refactor newparallel to use Config system...
r3604 self._set_prefix()
self._connect_completer()
self.on_trait_change(self._set_prefix, 'id')
self.on_trait_change(self._connect_completer, 'user_ns')
MinRK
prep newparallel for rebase...
r3539
# Build dict of handlers for message types
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 for msg_type in ['execute_request', 'complete_request', 'apply_request',
'clear_request']:
self.shell_handlers[msg_type] = getattr(self, msg_type)
MinRK
prep newparallel for rebase...
r3539
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 for msg_type in ['shutdown_request', 'abort_request']+self.shell_handlers.keys():
MinRK
prep newparallel for rebase...
r3539 self.control_handlers[msg_type] = getattr(self, msg_type)
MinRK
Refactor newparallel to use Config system...
r3604
self._initial_exec_lines()
MinRK
adapt kernel/error.py to zmq, improve error propagation.
r3583
def _wrap_exception(self, method=None):
MinRK
testing fixes
r3641 e_info = dict(engine_uuid=self.ident, engine_id=self.int_id, method=method)
MinRK
adapt kernel/error.py to zmq, improve error propagation.
r3583 content=wrap_exception(e_info)
return content
MinRK
Refactor newparallel to use Config system...
r3604 def _initial_exec_lines(self):
s = _Passer()
content = dict(silent=True, user_variable=[],user_expressions=[])
for line in self.exec_lines:
MinRK
rework logging connections
r3610 self.log.debug("executing initialization: %s"%line)
MinRK
Refactor newparallel to use Config system...
r3604 content.update({'code':line})
msg = self.session.msg('execute_request', content)
self.execute_request(s, [], msg)
MinRK
prep newparallel for rebase...
r3539 #-------------------- control handlers -----------------------------
MinRK
control channel progress
r3540 def abort_queues(self):
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 for stream in self.shell_streams:
MinRK
control channel progress
r3540 if stream:
self.abort_queue(stream)
MinRK
prep newparallel for rebase...
r3539
def abort_queue(self, stream):
while True:
MinRK
properly handle nothing to recv in StreamKernel.abort
r4011 idents,msg = self.session.recv(stream, zmq.NOBLOCK, content=True)
if msg is None:
return
MinRK
prep newparallel for rebase...
r3539
MinRK
rework logging connections
r3610 self.log.info("Aborting:")
self.log.info(str(msg))
MinRK
prep newparallel for rebase...
r3539 msg_type = msg['msg_type']
reply_type = msg_type.split('_')[0] + '_reply'
# reply_msg = self.session.msg(reply_type, {'status' : 'aborted'}, msg)
# self.reply_socket.send(ident,zmq.SNDMORE)
# self.reply_socket.send_json(reply_msg)
reply_msg = self.session.send(stream, reply_type,
MinRK
added zmq controller/engine entry points
r3550 content={'status' : 'aborted'}, parent=msg, ident=idents)[0]
MinRK
rework logging connections
r3610 self.log.debug(str(reply_msg))
MinRK
prep newparallel for rebase...
r3539 # We need to wait a bit for requests to come in. This can probably
# be set shorter for true asynchronous clients.
time.sleep(0.05)
def abort_request(self, stream, ident, parent):
MinRK
control channel progress
r3540 """abort a specifig msg by id"""
MinRK
prep newparallel for rebase...
r3539 msg_ids = parent['content'].get('msg_ids', None)
MinRK
control channel progress
r3540 if isinstance(msg_ids, basestring):
msg_ids = [msg_ids]
MinRK
prep newparallel for rebase...
r3539 if not msg_ids:
MinRK
control channel progress
r3540 self.abort_queues()
MinRK
prep newparallel for rebase...
r3539 for mid in msg_ids:
MinRK
control channel progress
r3540 self.aborted.add(str(mid))
MinRK
prep newparallel for rebase...
r3539
content = dict(status='ok')
MinRK
added zmq controller/engine entry points
r3550 reply_msg = self.session.send(stream, 'abort_reply', content=content,
MinRK
update API after sagedays29...
r3664 parent=parent, ident=ident)
MinRK
rework logging connections
r3610 self.log.debug(str(reply_msg))
MinRK
prep newparallel for rebase...
r3539
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 def shutdown_request(self, stream, ident, parent):
MinRK
use wrap_exception in controller, fix clear on kernel
r3560 """kill ourself. This should really be handled in an external process"""
MinRK
Clients can now shutdown the controller.
r3580 try:
self.abort_queues()
except:
MinRK
adapt kernel/error.py to zmq, improve error propagation.
r3583 content = self._wrap_exception('shutdown')
MinRK
Clients can now shutdown the controller.
r3580 else:
content = dict(parent['content'])
content['status'] = 'ok'
MinRK
added exec_key and fixed client.shutdown
r3575 msg = self.session.send(stream, 'shutdown_reply',
content=content, parent=parent, ident=ident)
MinRK
update API after sagedays29...
r3664 self.log.debug(str(msg))
MinRK
Clients can now shutdown the controller.
r3580 dc = ioloop.DelayedCallback(lambda : sys.exit(0), 1000, self.loop)
dc.start()
MinRK
use wrap_exception in controller, fix clear on kernel
r3560
MinRK
prep newparallel for rebase...
r3539 def dispatch_control(self, msg):
idents,msg = self.session.feed_identities(msg, copy=False)
MinRK
added exec_key and fixed client.shutdown
r3575 try:
msg = self.session.unpack_message(msg, content=True, copy=False)
except:
MinRK
rework logging connections
r3610 self.log.error("Invalid Message", exc_info=True)
MinRK
added exec_key and fixed client.shutdown
r3575 return
MinRK
prep newparallel for rebase...
r3539
header = msg['header']
msg_id = header['msg_id']
handler = self.control_handlers.get(msg['msg_type'], None)
if handler is None:
MinRK
rework logging connections
r3610 self.log.error("UNKNOWN CONTROL MESSAGE TYPE: %r"%msg['msg_type'])
MinRK
prep newparallel for rebase...
r3539 else:
MinRK
control channel progress
r3540 handler(self.control_stream, idents, msg)
MinRK
prep newparallel for rebase...
r3539
#-------------------- queue helpers ------------------------------
def check_dependencies(self, dependencies):
if not dependencies:
return True
if len(dependencies) == 2 and dependencies[0] in 'any all'.split():
anyorall = dependencies[0]
dependencies = dependencies[1]
else:
anyorall = 'all'
results = self.client.get_results(dependencies,status_only=True)
if results['status'] != 'ok':
return False
if anyorall == 'any':
if not results['completed']:
return False
else:
if results['pending']:
return False
return True
MinRK
control channel progress
r3540 def check_aborted(self, msg_id):
return msg_id in self.aborted
MinRK
prep newparallel for rebase...
r3539 #-------------------- queue handlers -----------------------------
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 def clear_request(self, stream, idents, parent):
"""Clear our namespace."""
self.user_ns = {}
msg = self.session.send(stream, 'clear_reply', ident=idents, parent=parent,
content = dict(status='ok'))
MinRK
Refactor newparallel to use Config system...
r3604 self._initial_exec_lines()
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569
MinRK
prep newparallel for rebase...
r3539 def execute_request(self, stream, ident, parent):
MinRK
rework logging connections
r3610 self.log.debug('execute request %s'%parent)
MinRK
prep newparallel for rebase...
r3539 try:
code = parent[u'content'][u'code']
except:
MinRK
rework logging connections
r3610 self.log.error("Got bad msg: %s"%parent, exc_info=True)
MinRK
prep newparallel for rebase...
r3539 return
MinRK
propagate iopub to clients
r3602 self.session.send(self.iopub_stream, u'pyin', {u'code':code},parent=parent,
MinRK
improved logging + Hub,Engine,Scheduler are Configurable
r3603 ident='%s.pyin'%self.prefix)
MinRK
handle datetime objects in Session...
r4008 started = datetime.now()
MinRK
prep newparallel for rebase...
r3539 try:
comp_code = self.compiler(code, '<zmq-kernel>')
# allow for not overriding displayhook
if hasattr(sys.displayhook, 'set_parent'):
sys.displayhook.set_parent(parent)
MinRK
propagate iopub to clients
r3602 sys.stdout.set_parent(parent)
sys.stderr.set_parent(parent)
MinRK
prep newparallel for rebase...
r3539 exec comp_code in self.user_ns, self.user_ns
except:
MinRK
adapt kernel/error.py to zmq, improve error propagation.
r3583 exc_content = self._wrap_exception('execute')
MinRK
prep newparallel for rebase...
r3539 # exc_msg = self.session.msg(u'pyerr', exc_content, parent)
MinRK
propagate iopub to clients
r3602 self.session.send(self.iopub_stream, u'pyerr', exc_content, parent=parent,
MinRK
improved logging + Hub,Engine,Scheduler are Configurable
r3603 ident='%s.pyerr'%self.prefix)
MinRK
prep newparallel for rebase...
r3539 reply_content = exc_content
else:
reply_content = {'status' : 'ok'}
MinRK
Improvements to dependency handling...
r3607
MinRK
add timestamps all messages; fix reply on wrong channel bug.
r3578 reply_msg = self.session.send(stream, u'execute_reply', reply_content, parent=parent,
ident=ident, subheader = dict(started=started))
MinRK
rework logging connections
r3610 self.log.debug(str(reply_msg))
MinRK
prep newparallel for rebase...
r3539 if reply_msg['content']['status'] == u'error':
MinRK
control channel progress
r3540 self.abort_queues()
MinRK
prep newparallel for rebase...
r3539
def complete_request(self, stream, ident, parent):
matches = {'matches' : self.complete(parent),
'status' : 'ok'}
completion_msg = self.session.send(stream, 'complete_reply',
matches, parent, ident)
# print >> sys.__stdout__, completion_msg
def complete(self, msg):
return self.completer.complete(msg.content.line, msg.content.text)
def apply_request(self, stream, ident, parent):
MinRK
support iterating through map results as they arrive
r3627 # flush previous reply, so this request won't block it
stream.flush(zmq.POLLOUT)
MinRK
prep newparallel for rebase...
r3539 try:
content = parent[u'content']
bufs = parent[u'buffers']
msg_id = parent['header']['msg_id']
MinRK
update API after sagedays29...
r3664 # bound = parent['header'].get('bound', False)
MinRK
prep newparallel for rebase...
r3539 except:
MinRK
rework logging connections
r3610 self.log.error("Got bad msg: %s"%parent, exc_info=True)
MinRK
prep newparallel for rebase...
r3539 return
# pyin_msg = self.session.msg(u'pyin',{u'code':code}, parent=parent)
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 # self.iopub_stream.send(pyin_msg)
# self.session.send(self.iopub_stream, u'pyin', {u'code':code},parent=parent)
MinRK
Refactor newparallel to use Config system...
r3604 sub = {'dependencies_met' : True, 'engine' : self.ident,
MinRK
handle datetime objects in Session...
r4008 'started': datetime.now()}
MinRK
prep newparallel for rebase...
r3539 try:
# allow for not overriding displayhook
if hasattr(sys.displayhook, 'set_parent'):
sys.displayhook.set_parent(parent)
MinRK
propagate iopub to clients
r3602 sys.stdout.set_parent(parent)
sys.stderr.set_parent(parent)
MinRK
prep newparallel for rebase...
r3539 # exec "f(*args,**kwargs)" in self.user_ns, self.user_ns
MinRK
reflect revised apply_bound pattern
r3655 working = self.user_ns
# suffix =
prefix = "_"+str(msg_id).replace("-","")+"_"
MinRK
update API after sagedays29...
r3664
MinRK
prep newparallel for rebase...
r3539 f,args,kwargs = unpack_apply_message(bufs, working, copy=False)
MinRK
update API after sagedays29...
r3664 # if bound:
# bound_ns = Namespace(working)
# args = [bound_ns]+list(args)
MinRK
Improvements to dependency handling...
r3607 fname = getattr(f, '__name__', 'f')
MinRK
split pendingresult and remotefunction into own files, add view.map.
r3588
MinRK
reflect revised apply_bound pattern
r3655 fname = prefix+"f"
argname = prefix+"args"
kwargname = prefix+"kwargs"
resultname = prefix+"result"
MinRK
prep newparallel for rebase...
r3539
MinRK
reflect revised apply_bound pattern
r3655 ns = { fname : f, argname : args, kwargname : kwargs , resultname : None }
MinRK
prep newparallel for rebase...
r3539 # print ns
working.update(ns)
code = "%s=%s(*%s,**%s)"%(resultname, fname, argname, kwargname)
MinRK
reflect revised apply_bound pattern
r3655 try:
exec code in working,working
result = working.get(resultname)
finally:
MinRK
prep newparallel for rebase...
r3539 for key in ns.iterkeys():
MinRK
reflect revised apply_bound pattern
r3655 working.pop(key)
MinRK
update API after sagedays29...
r3664 # if bound:
# working.update(bound_ns)
MinRK
prep newparallel for rebase...
r3539
packed_result,buf = serialize_object(result)
result_buf = [packed_result]+buf
except:
MinRK
adapt kernel/error.py to zmq, improve error propagation.
r3583 exc_content = self._wrap_exception('apply')
MinRK
prep newparallel for rebase...
r3539 # exc_msg = self.session.msg(u'pyerr', exc_content, parent)
MinRK
propagate iopub to clients
r3602 self.session.send(self.iopub_stream, u'pyerr', exc_content, parent=parent,
MinRK
improved logging + Hub,Engine,Scheduler are Configurable
r3603 ident='%s.pyerr'%self.prefix)
MinRK
prep newparallel for rebase...
r3539 reply_content = exc_content
result_buf = []
MinRK
added dependency decorator
r3546
MinRK
Improvements to dependency handling...
r3607 if exc_content['ename'] == 'UnmetDependency':
MinRK
use wrap_exception in controller, fix clear on kernel
r3560 sub['dependencies_met'] = False
MinRK
prep newparallel for rebase...
r3539 else:
reply_content = {'status' : 'ok'}
MinRK
Improvements to dependency handling...
r3607
# put 'ok'/'error' status in header, for scheduler introspection:
sub['status'] = reply_content['status']
MinRK
added dependency decorator
r3546 reply_msg = self.session.send(stream, u'apply_reply', reply_content,
parent=parent, ident=ident,buffers=result_buf, subheader=sub)
MinRK
update API after sagedays29...
r3664
# flush i/o
# should this be before reply_msg is sent, like in the single-kernel code,
# or should nothing get in the way of real results?
sys.stdout.flush()
sys.stderr.flush()
MinRK
prep newparallel for rebase...
r3539
def dispatch_queue(self, stream, msg):
MinRK
use new stream.flush()
r3541 self.control_stream.flush()
MinRK
prep newparallel for rebase...
r3539 idents,msg = self.session.feed_identities(msg, copy=False)
MinRK
added exec_key and fixed client.shutdown
r3575 try:
msg = self.session.unpack_message(msg, content=True, copy=False)
except:
MinRK
rework logging connections
r3610 self.log.error("Invalid Message", exc_info=True)
MinRK
added exec_key and fixed client.shutdown
r3575 return
MinRK
prep newparallel for rebase...
r3539
header = msg['header']
msg_id = header['msg_id']
if self.check_aborted(msg_id):
MinRK
control channel progress
r3540 self.aborted.remove(msg_id)
# is it safe to assume a msg_id will not be resubmitted?
reply_type = msg['msg_type'].split('_')[0] + '_reply'
MinRK
better handle aborted/unschedulers tasks
r3687 status = {'status' : 'aborted'}
reply_msg = self.session.send(stream, reply_type, subheader=status,
content=status, parent=msg, ident=idents)
MinRK
control channel progress
r3540 return
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 handler = self.shell_handlers.get(msg['msg_type'], None)
MinRK
prep newparallel for rebase...
r3539 if handler is None:
MinRK
rework logging connections
r3610 self.log.error("UNKNOWN MESSAGE TYPE: %r"%msg['msg_type'])
MinRK
prep newparallel for rebase...
r3539 else:
handler(stream, idents, msg)
def start(self):
#### stream mode:
if self.control_stream:
self.control_stream.on_recv(self.dispatch_control, copy=False)
MinRK
control channel progress
r3540 self.control_stream.on_err(printer)
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569
MinRK
add timestamps all messages; fix reply on wrong channel bug.
r3578 def make_dispatcher(stream):
def dispatcher(msg):
return self.dispatch_queue(stream, msg)
return dispatcher
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 for s in self.shell_streams:
MinRK
add timestamps all messages; fix reply on wrong channel bug.
r3578 s.on_recv(make_dispatcher(s), copy=False)
MinRK
Improvements to dependency handling...
r3607 s.on_err(printer)
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569
if self.iopub_stream:
self.iopub_stream.on_err(printer)
MinRK
prep newparallel for rebase...
r3539
#### while True mode:
# while True:
# idle = True
# try:
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 # msg = self.shell_stream.socket.recv_multipart(
MinRK
prep newparallel for rebase...
r3539 # zmq.NOBLOCK, copy=False)
# except zmq.ZMQError, e:
# if e.errno != zmq.EAGAIN:
# raise e
# else:
# idle=False
MinRK
Parallel kernel/engine startup looks a bit more like pykernel
r3569 # self.dispatch_queue(self.shell_stream, msg)
MinRK
prep newparallel for rebase...
r3539 #
# if not self.task_stream.empty():
# idle=False
# msg = self.task_stream.recv_multipart()
# self.dispatch_queue(self.task_stream, msg)
# if idle:
# # don't busywait
# time.sleep(1e-3)