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Merge pull request #1597 from minrk/while_eventloop...
Merge pull request #1597 from minrk/while_eventloop re-enter kernel.eventloop after catching SIGINT This protects the kernel from exiting due to bugs failing to catch SIGINT properly in the eventloop integration functions, as described in #1228. It does not fix those bugs, only reduces the severity of their consequences.

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display_protocol.ipynb
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/ docs / examples / notebooks / display_protocol.ipynb
Fernando Perez
Add example notebooks about display protocol and simple math/plots.
r4776 {
Fernando Perez
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r5785 "metadata": {
"name": "display_protocol"
Brian Granger
Updating example notebooks to v3 format.
r6035 },
"nbformat": 3,
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r5785 "worksheets": [
{
"cells": [
{
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r6035 "cell_type": "markdown",
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r5785 "source": [
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r6035 "# Using the IPython display protocol for your own objects",
"",
"IPython extends the idea of the ``__repr__`` method in Python to support multiple representations for a given",
"object, which clients can use to display the object according to their capabilities. An object can return multiple",
"representations of itself by implementing special methods, and you can also define at runtime custom display ",
"functions for existing objects whose methods you can't or won't modify. In this notebook, we show how both approaches work.",
"",
"<br/>",
"**Note:** this notebook has had all output cells stripped out so we can include it in the IPython documentation with ",
"a minimal file size. You'll need to manually execute the cells to see the output (you can run all of them with the ",
"\"Run All\" button, or execute each individually). You must start this notebook with",
"<pre>",
"ipython notebook --pylab inline",
"</pre>",
"",
"to ensure pylab support is available for plots.",
"",
"## Custom-built classes with dedicated ``_repr_*_`` methods",
"",
"In our first example, we illustrate how objects can expose directly to IPython special representations of",
"themselves, by providing methods such as ``_repr_svg_``, ``_repr_png_``, ``_repr_latex_``, etc. For a full",
"list of the special ``_repr_*_`` methods supported, see the code in ``IPython.core.displaypub``.",
"",
"As an illustration, we build a class that holds data generated by sampling a Gaussian distribution with given mean ",
"and variance. The class can display itself in a variety of ways: as a LaTeX expression or as an image in PNG or SVG ",
"format. Each frontend can then decide which representation it can handle.",
"Further, we illustrate how to expose directly to the user the ability to directly access the various alternate ",
"representations (since by default displaying the object itself will only show one, and which is shown will depend on the ",
"required representations that even cache necessary data in cases where it may be expensive to compute.",
"",
Fernando Perez
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r5785 "The next cell defines the Gaussian class:"
]
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
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r6035 "from IPython.core.pylabtools import print_figure",
"from IPython.core.display import Image, SVG, Math",
"",
"class Gaussian(object):",
" \"\"\"A simple object holding data sampled from a Gaussian distribution.",
" \"\"\"",
" def __init__(self, mean=0, std=1, size=1000):",
" self.data = np.random.normal(mean, std, size)",
" self.mean = mean",
" self.std = std",
" self.size = size",
" # For caching plots that may be expensive to compute",
" self._png_data = None",
" self._svg_data = None",
" ",
" def _figure_data(self, format):",
" fig, ax = plt.subplots()",
" ax.plot(self.data, 'o')",
" ax.set_title(self._repr_latex_())",
" data = print_figure(fig, format)",
" # We MUST close the figure, otherwise IPython's display machinery",
" # will pick it up and send it as output, resulting in a double display",
" plt.close(fig)",
" return data",
" ",
" # Here we define the special repr methods that provide the IPython display protocol",
" # Note that for the two figures, we cache the figure data once computed.",
" ",
" def _repr_png_(self):",
" if self._png_data is None:",
" self._png_data = self._figure_data('png')",
" return self._png_data",
"",
"",
" def _repr_svg_(self):",
" if self._svg_data is None:",
" self._svg_data = self._figure_data('svg')",
" return self._svg_data",
" ",
" def _repr_latex_(self):",
" return r'$\\mathcal{N}(\\mu=%.2g, \\sigma=%.2g),\\ N=%d$' % (self.mean,",
" self.std, self.size)",
" ",
" # We expose as properties some of the above reprs, so that the user can see them",
" # directly (since otherwise the client dictates which one it shows by default)",
" @property",
" def png(self):",
" return Image(self._repr_png_(), embed=True)",
" ",
" @property",
" def svg(self):",
" return SVG(self._repr_svg_())",
" ",
" @property",
" def latex(self):",
" return Math(self._repr_svg_())",
" ",
" # An example of using a property to display rich information, in this case",
" # the histogram of the distribution. We've hardcoded the format to be png",
" # in this case, but in production code it would be trivial to make it an option",
" @property",
" def hist(self):",
" fig, ax = plt.subplots()",
" ax.hist(self.data, bins=100)",
" ax.set_title(self._repr_latex_())",
" data = print_figure(fig, 'png')",
" plt.close(fig)",
Fernando Perez
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r5785 " return Image(data, embed=True)"
Brian Granger
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r6035 ],
"language": "python",
"outputs": [],
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r5785 "prompt_number": 1
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r6035 },
Fernando Perez
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r5785 {
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r6035 "cell_type": "markdown",
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r5785 "source": [
"Now, we create an instance of the Gaussian distribution, whose default representation will be its LaTeX form:"
]
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
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r5785 "input": [
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r6035 "x = Gaussian()",
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r5785 "x"
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r6035 ],
"language": "python",
"outputs": [],
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r5785 "prompt_number": 2
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r6035 },
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r5785 {
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r6035 "cell_type": "markdown",
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r5785 "source": [
"We can view the data in png or svg formats:"
]
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
"x.png"
Brian Granger
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r6035 ],
"language": "python",
"outputs": [],
Fernando Perez
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r5785 "prompt_number": 3
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
"x.svg"
Brian Granger
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r6035 ],
"language": "python",
"outputs": [],
Fernando Perez
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r5785 "prompt_number": 4
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r6035 },
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r5785 {
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r6035 "cell_type": "markdown",
Fernando Perez
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r5785 "source": [
Brian Granger
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r6035 "Since IPython only displays by default as an ``Out[]`` cell the result of the last computation, we can use the",
Fernando Perez
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r5785 "``display()`` function to show more than one representation in a single cell:"
]
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
Brian Granger
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r6035 "display(x.png)",
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r5785 "display(x.svg)"
Brian Granger
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r6035 ],
"language": "python",
"outputs": [],
Fernando Perez
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r5785 "prompt_number": 5
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r6035 },
Fernando Perez
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r5785 {
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r6035 "cell_type": "markdown",
Fernando Perez
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r5785 "source": [
"Now let's create a new Gaussian with different parameters"
]
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
Brian Granger
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r6035 "x2 = Gaussian(0.5, 0.2, 2000)",
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r5785 "x2"
Brian Granger
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r6035 ],
"language": "python",
"outputs": [],
Fernando Perez
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r5785 "prompt_number": 6
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
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r6035 "cell_type": "markdown",
Fernando Perez
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r5785 "source": [
"We can easily compare them by displaying their histograms"
]
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
Brian Granger
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r6035 "display(x.hist)",
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r5785 "display(x2.hist)"
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r6035 ],
"language": "python",
"outputs": [],
Fernando Perez
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r5785 "prompt_number": 7
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r6035 },
Fernando Perez
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r5785 {
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r6035 "cell_type": "markdown",
Fernando Perez
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r5785 "source": [
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r6035 "## Adding IPython display support to existing objects",
"",
"When you are directly writing your own classes, you can adapt them for display in IPython by ",
"following the above example. But in practice, we often need to work with existing code we",
"can't modify. ",
"",
"We now illustrate how to add these kinds of extended display capabilities to existing objects.",
"We will use the numpy polynomials and change their default representation to be a formatted",
"LaTeX expression.",
"",
Fernando Perez
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r5785 "First, consider how a numpy polynomial object renders by default:"
]
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
Brian Granger
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r6035 "p = np.polynomial.Polynomial([1,2,3], [-10, 10])",
Fernando Perez
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r5785 "p"
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r6035 ],
"language": "python",
"outputs": [],
Fernando Perez
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r5785 "prompt_number": 8
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r6035 },
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r5785 {
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r6035 "cell_type": "markdown",
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r5785 "source": [
"Next, we define a function that pretty-prints a polynomial as a LaTeX string:"
]
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": true,
Fernando Perez
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r5785 "input": [
Brian Granger
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r6035 "def poly2latex(p):",
" terms = ['%.2g' % p.coef[0]]",
" if len(p) > 1:",
" term = 'x'",
" c = p.coef[1]",
" if c!=1:",
" term = ('%.2g ' % c) + term",
" terms.append(term)",
" if len(p) > 2:",
" for i in range(2, len(p)):",
" term = 'x^%d' % i",
" c = p.coef[i]",
" if c!=1:",
" term = ('%.2g ' % c) + term",
" terms.append(term)",
" px = '$P(x)=%s$' % '+'.join(terms)",
" dom = r', domain: $[%.2g,\\ %.2g]$' % tuple(p.domain)",
Fernando Perez
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r5785 " return px+dom"
Brian Granger
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r6035 ],
"language": "python",
"outputs": [],
Fernando Perez
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r5797 "prompt_number": 9
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "markdown",
Fernando Perez
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r5785 "source": [
"This produces, on our polynomial ``p``, the following:"
]
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
"poly2latex(p)"
Brian Granger
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r6035 ],
"language": "python",
"outputs": [],
Fernando Perez
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r5797 "prompt_number": 10
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r6035 },
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r5785 {
Brian Granger
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r6035 "cell_type": "markdown",
Fernando Perez
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r5785 "source": [
Brian Granger
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r6035 "Note that this did *not* produce a formated LaTeX object, because it is simply a string ",
"with LaTeX code. In order for this to be interpreted as a mathematical expression, it",
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r5785 "must be properly wrapped into a Math object:"
]
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
Brian Granger
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r6035 "from IPython.core.display import Math",
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r5785 "Math(poly2latex(p))"
Brian Granger
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r6035 ],
"language": "python",
"outputs": [],
Fernando Perez
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r5797 "prompt_number": 11
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "markdown",
Fernando Perez
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r5785 "source": [
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r6035 "But we can configure IPython to do this automatically for us as follows. We hook into the",
"IPython display system and instruct it to use ``poly2latex`` for the latex mimetype, when",
"encountering objects of the ``Polynomial`` type defined in the",
Fernando Perez
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r5785 "``numpy.polynomial.polynomial`` module:"
]
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
Updating example notebooks to v3 format.
r6035 "cell_type": "code",
"collapsed": true,
Fernando Perez
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r5785 "input": [
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r6035 "ip = get_ipython()",
"latex_formatter = ip.display_formatter.formatters['text/latex']",
"latex_formatter.for_type_by_name('numpy.polynomial.polynomial',",
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r5785 " 'Polynomial', poly2latex)"
Brian Granger
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r6035 ],
"language": "python",
"outputs": [],
Fernando Perez
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r5797 "prompt_number": 12
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r6035 },
Fernando Perez
Fix small bug in display protocol example (numpy polynomials).
r5785 {
Brian Granger
Updating example notebooks to v3 format.
r6035 "cell_type": "markdown",
Fernando Perez
Fix small bug in display protocol example (numpy polynomials).
r5785 "source": [
Brian Granger
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r6035 "For more examples on how to use the above system, and how to bundle similar print functions",
"into a convenient IPython extension, see the ``IPython/extensions/sympyprinting.py`` file. ",
"The machinery that defines the display system is in the ``display.py`` and ``displaypub.py`` ",
"files in ``IPython/core``.",
"",
"Once our special printer has been loaded, all polynomials will be represented by their ",
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r5785 "mathematical form instead:"
]
Brian Granger
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r6035 },
Fernando Perez
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r5785 {
Brian Granger
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
"p"
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r6035 ],
"language": "python",
"outputs": [],
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r5797 "prompt_number": 13
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r6035 },
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r5785 {
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r6035 "cell_type": "code",
"collapsed": false,
Fernando Perez
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r5785 "input": [
Brian Granger
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r6035 "p2 = np.polynomial.Polynomial([-20, 71, -15, 1])",
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r5785 "p2"
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r6035 ],
"language": "python",
"outputs": [],
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r5797 "prompt_number": 14
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r6035 },
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r5785 {
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r6035 "cell_type": "code",
"collapsed": true,
"input": [],
"language": "python",
"outputs": [],
Fernando Perez
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r5785 "prompt_number": 14
}
]
}
]
Fernando Perez
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r4776 }