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Added components to manage jobs/tasks for Win HPC job scheduler.
Added components to manage jobs/tasks for Win HPC job scheduler.

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launcher.py
700 lines | 23.9 KiB | text/x-python | PythonLexer
Brian Granger
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r2304 #!/usr/bin/env python
# encoding: utf-8
"""
Facilities for launching processing asynchronously.
"""
#-----------------------------------------------------------------------------
# Copyright (C) 2008-2009 The IPython Development Team
#
# Distributed under the terms of the BSD License. The full license is in
# the file COPYING, distributed as part of this software.
#-----------------------------------------------------------------------------
#-----------------------------------------------------------------------------
# Imports
#-----------------------------------------------------------------------------
import os
import re
import sys
from IPython.core.component import Component
from IPython.external import Itpl
from IPython.utils.traitlets import Str, Int, List, Unicode
from IPython.kernel.twistedutil import gatherBoth, make_deferred, sleep_deferred
from twisted.internet import reactor, defer
from twisted.internet.defer import inlineCallbacks
from twisted.internet.protocol import ProcessProtocol
from twisted.internet.utils import getProcessOutput
from twisted.internet.error import ProcessDone, ProcessTerminated
from twisted.python import log
from twisted.python.failure import Failure
#-----------------------------------------------------------------------------
# Generic launchers
#-----------------------------------------------------------------------------
class LauncherError(Exception):
pass
class ProcessStateError(LauncherError):
pass
class UnknownStatus(LauncherError):
pass
class BaseLauncher(Component):
"""An asbtraction for starting, stopping and signaling a process."""
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r2310 # A directory for files related to the process. But, we don't cd to
# this directory,
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r2304 working_dir = Unicode(u'')
def __init__(self, working_dir, parent=None, name=None, config=None):
super(BaseLauncher, self).__init__(parent, name, config)
self.working_dir = working_dir
self.state = 'before' # can be before, running, after
self.stop_deferreds = []
self.start_data = None
self.stop_data = None
@property
def args(self):
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r2310 """A list of cmd and args that will be used to start the process.
This is what is passed to :func:`spawnProcess` and the first element
will be the process name.
"""
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r2304 return self.find_args()
def find_args(self):
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r2310 """The ``.args`` property calls this to find the args list.
Subcommand should implement this to construct the cmd and args.
"""
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r2304 raise NotImplementedError('find_args must be implemented in a subclass')
@property
def arg_str(self):
"""The string form of the program arguments."""
return ' '.join(self.args)
@property
def running(self):
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r2310 """Am I running."""
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r2304 if self.state == 'running':
return True
else:
return False
def start(self):
"""Start the process.
This must return a deferred that fires with information about the
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r2310 process starting (like a pid, job id, etc.).
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r2304 """
return defer.fail(
Failure(NotImplementedError(
'start must be implemented in a subclass')
)
)
def stop(self):
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r2310 """Stop the process and notify observers of stopping.
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r2304
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r2310 This must return a deferred that fires with information about the
processing stopping, like errors that occur while the process is
attempting to be shut down. This deferred won't fire when the process
actually stops. To observe the actual process stopping, see
:func:`observe_stop`.
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r2304 """
return defer.fail(
Failure(NotImplementedError(
'stop must be implemented in a subclass')
)
)
def observe_stop(self):
"""Get a deferred that will fire when the process stops.
The deferred will fire with data that contains information about
the exit status of the process.
"""
if self.state=='after':
return defer.succeed(self.stop_data)
else:
d = defer.Deferred()
self.stop_deferreds.append(d)
return d
def notify_start(self, data):
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r2310 """Call this to trigger startup actions.
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r2304
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r2310 This logs the process startup and sets the state to 'running'. It is
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r2304 a pass-through so it can be used as a callback.
"""
log.msg('Process %r started: %r' % (self.args[0], data))
self.start_data = data
self.state = 'running'
return data
def notify_stop(self, data):
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r2310 """Call this to trigger process stop actions.
This logs the process stopping and sets the state to 'after'. Call
this to trigger all the deferreds from :func:`observe_stop`."""
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r2304
log.msg('Process %r stopped: %r' % (self.args[0], data))
self.stop_data = data
self.state = 'after'
for i in range(len(self.stop_deferreds)):
d = self.stop_deferreds.pop()
d.callback(data)
return data
def signal(self, sig):
"""Signal the process.
Return a semi-meaningless deferred after signaling the process.
Parameters
----------
sig : str or int
'KILL', 'INT', etc., or any signal number
"""
return defer.fail(
Failure(NotImplementedError(
'signal must be implemented in a subclass')
)
)
class LocalProcessLauncherProtocol(ProcessProtocol):
"""A ProcessProtocol to go with the LocalProcessLauncher."""
def __init__(self, process_launcher):
self.process_launcher = process_launcher
self.pid = None
def connectionMade(self):
self.pid = self.transport.pid
self.process_launcher.notify_start(self.transport.pid)
def processEnded(self, status):
value = status.value
if isinstance(value, ProcessDone):
self.process_launcher.notify_stop(
{'exit_code':0,
'signal':None,
'status':None,
'pid':self.pid
}
)
elif isinstance(value, ProcessTerminated):
self.process_launcher.notify_stop(
{'exit_code':value.exitCode,
'signal':value.signal,
'status':value.status,
'pid':self.pid
}
)
else:
raise UnknownStatus("Unknown exit status, this is probably a "
"bug in Twisted")
def outReceived(self, data):
log.msg(data)
def errReceived(self, data):
log.err(data)
class LocalProcessLauncher(BaseLauncher):
"""Start and stop an external process in an asynchronous manner."""
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r2310 # This is used to to construct self.args, which is passed to
# spawnProcess.
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r2304 cmd_and_args = List([])
def __init__(self, working_dir, parent=None, name=None, config=None):
super(LocalProcessLauncher, self).__init__(
working_dir, parent, name, config
)
self.process_protocol = None
self.start_deferred = None
def find_args(self):
return self.cmd_and_args
def start(self):
if self.state == 'before':
self.process_protocol = LocalProcessLauncherProtocol(self)
self.start_deferred = defer.Deferred()
self.process_transport = reactor.spawnProcess(
self.process_protocol,
str(self.args[0]),
[str(a) for a in self.args],
env=os.environ
)
return self.start_deferred
else:
s = 'The process was already started and has state: %r' % self.state
return defer.fail(ProcessStateError(s))
def notify_start(self, data):
super(LocalProcessLauncher, self).notify_start(data)
self.start_deferred.callback(data)
def stop(self):
return self.interrupt_then_kill()
@make_deferred
def signal(self, sig):
if self.state == 'running':
self.process_transport.signalProcess(sig)
@inlineCallbacks
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r2308 def interrupt_then_kill(self, delay=2.0):
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r2310 """Send INT, wait a delay and then send KILL."""
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r2304 yield self.signal('INT')
yield sleep_deferred(delay)
yield self.signal('KILL')
class MPIExecLauncher(LocalProcessLauncher):
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r2310 """Launch an external process using mpiexec."""
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r2304
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r2310 # The mpiexec command to use in starting the process.
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r2304 mpi_cmd = List(['mpiexec'], config=True)
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r2310 # The command line arguments to pass to mpiexec.
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r2304 mpi_args = List([], config=True)
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r2310 # The program to start using mpiexec.
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r2304 program = List(['date'], config=True)
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r2310 # The command line argument to the program.
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r2304 program_args = List([], config=True)
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r2310 # The number of instances of the program to start.
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r2304 n = Int(1, config=True)
def find_args(self):
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r2310 """Build self.args using all the fields."""
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r2304 return self.mpi_cmd + ['-n', self.n] + self.mpi_args + \
self.program + self.program_args
def start(self, n):
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r2310 """Start n instances of the program using mpiexec."""
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r2304 self.n = n
return super(MPIExecLauncher, self).start()
class SSHLauncher(BaseLauncher):
"""A minimal launcher for ssh.
To be useful this will probably have to be extended to use the ``sshx``
idea for environment variables. There could be other things this needs
as well.
"""
ssh_cmd = List(['ssh'], config=True)
ssh_args = List([], config=True)
program = List(['date'], config=True)
program_args = List([], config=True)
hostname = Str('', config=True)
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r2315 user = Str('', config=True)
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r2304 location = Str('')
def _hostname_changed(self, name, old, new):
self.location = '%s@%s' % (self.user, new)
def _user_changed(self, name, old, new):
self.location = '%s@%s' % (new, self.hostname)
def find_args(self):
return self.ssh_cmd + self.ssh_args + [self.location] + \
self.program + self.program_args
def start(self, n, hostname=None, user=None):
if hostname is not None:
self.hostname = hostname
if user is not None:
self.user = user
return super(SSHLauncher, self).start()
class WindowsHPCLauncher(BaseLauncher):
pass
class BatchSystemLauncher(BaseLauncher):
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r2310 """Launch an external process using a batch system.
This class is designed to work with UNIX batch systems like PBS, LSF,
GridEngine, etc. The overall model is that there are different commands
like qsub, qdel, etc. that handle the starting and stopping of the process.
This class also has the notion of a batch script. The ``batch_template``
attribute can be set to a string that is a template for the batch script.
This template is instantiated using Itpl. Thus the template can use
${n} fot the number of instances. Subclasses can add additional variables
to the template dict.
"""
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r2304
# Subclasses must fill these in. See PBSEngineSet
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r2310 # The name of the command line program used to submit jobs.
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r2304 submit_command = Str('', config=True)
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r2310 # The name of the command line program used to delete jobs.
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r2304 delete_command = Str('', config=True)
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r2310 # A regular expression used to get the job id from the output of the
# submit_command.
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r2304 job_id_regexp = Str('', config=True)
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r2310 # The string that is the batch script template itself.
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r2304 batch_template = Str('', config=True)
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r2310 # The filename of the instantiated batch script.
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r2304 batch_file_name = Unicode(u'batch_script', config=True)
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r2310 # The full path to the instantiated batch script.
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r2304 batch_file = Unicode(u'')
def __init__(self, working_dir, parent=None, name=None, config=None):
super(BatchSystemLauncher, self).__init__(
working_dir, parent, name, config
)
self.batch_file = os.path.join(self.working_dir, self.batch_file_name)
self.context = {}
def parse_job_id(self, output):
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r2310 """Take the output of the submit command and return the job id."""
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r2304 m = re.match(self.job_id_regexp, output)
if m is not None:
job_id = m.group()
else:
raise LauncherError("Job id couldn't be determined: %s" % output)
self.job_id = job_id
log.msg('Job started with job id: %r' % job_id)
return job_id
def write_batch_script(self, n):
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r2310 """Instantiate and write the batch script to the working_dir."""
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r2304 self.context['n'] = n
script_as_string = Itpl.itplns(self.batch_template, self.context)
log.msg('Writing instantiated batch script: %s' % self.batch_file)
f = open(self.batch_file, 'w')
f.write(script_as_string)
f.close()
@inlineCallbacks
def start(self, n):
"""Start n copies of the process using a batch system."""
self.write_batch_script(n)
output = yield getProcessOutput(self.submit_command,
[self.batch_file], env=os.environ)
job_id = self.parse_job_id(output)
self.notify_start(job_id)
defer.returnValue(job_id)
@inlineCallbacks
def stop(self):
output = yield getProcessOutput(self.delete_command,
[self.job_id], env=os.environ
)
self.notify_stop(output) # Pass the output of the kill cmd
defer.returnValue(output)
class PBSLauncher(BatchSystemLauncher):
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r2310 """A BatchSystemLauncher subclass for PBS."""
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r2304
submit_command = Str('qsub', config=True)
delete_command = Str('qdel', config=True)
job_id_regexp = Str('\d+', config=True)
batch_template = Str('', config=True)
batch_file_name = Unicode(u'pbs_batch_script', config=True)
batch_file = Unicode(u'')
#-----------------------------------------------------------------------------
# Controller launchers
#-----------------------------------------------------------------------------
def find_controller_cmd():
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r2310 """Find the command line ipcontroller program in a cross platform way."""
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r2304 if sys.platform == 'win32':
# This logic is needed because the ipcontroller script doesn't
# always get installed in the same way or in the same location.
from IPython.kernel import ipcontrollerapp
script_location = ipcontrollerapp.__file__.replace('.pyc', '.py')
# The -u option here turns on unbuffered output, which is required
# on Win32 to prevent wierd conflict and problems with Twisted.
# Also, use sys.executable to make sure we are picking up the
# right python exe.
cmd = [sys.executable, '-u', script_location]
else:
# ipcontroller has to be on the PATH in this case.
cmd = ['ipcontroller']
return cmd
class LocalControllerLauncher(LocalProcessLauncher):
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r2310 """Launch a controller as a regular external process."""
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r2304
bgranger
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r2317 controller_cmd = List(find_controller_cmd(), config=True)
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r2310 # Command line arguments to ipcontroller.
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r2304 controller_args = List(['--log-to-file','--log-level', '40'], config=True)
def find_args(self):
return self.controller_cmd + self.controller_args
def start(self, profile=None, cluster_dir=None):
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r2310 """Start the controller by profile or cluster_dir."""
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r2304 if cluster_dir is not None:
self.controller_args.extend(['--cluster-dir', cluster_dir])
if profile is not None:
self.controller_args.extend(['--profile', profile])
log.msg("Starting LocalControllerLauncher: %r" % self.args)
return super(LocalControllerLauncher, self).start()
class WindowsHPCControllerLauncher(WindowsHPCLauncher):
pass
class MPIExecControllerLauncher(MPIExecLauncher):
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r2310 """Launch a controller using mpiexec."""
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r2304
bgranger
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r2317 controller_cmd = List(find_controller_cmd(), config=True)
Brian Granger
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r2310 # Command line arguments to ipcontroller.
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r2304 controller_args = List(['--log-to-file','--log-level', '40'], config=True)
n = Int(1, config=False)
def start(self, profile=None, cluster_dir=None):
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r2310 """Start the controller by profile or cluster_dir."""
Brian Granger
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r2304 if cluster_dir is not None:
self.controller_args.extend(['--cluster-dir', cluster_dir])
if profile is not None:
self.controller_args.extend(['--profile', profile])
log.msg("Starting MPIExecControllerLauncher: %r" % self.args)
return super(MPIExecControllerLauncher, self).start(1)
def find_args(self):
return self.mpi_cmd + ['-n', self.n] + self.mpi_args + \
self.controller_cmd + self.controller_args
class PBSControllerLauncher(PBSLauncher):
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r2310 """Launch a controller using PBS."""
batch_file_name = Unicode(u'pbs_batch_script_controller', config=True)
Brian Granger
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r2304
def start(self, profile=None, cluster_dir=None):
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r2310 """Start the controller by profile or cluster_dir."""
Brian Granger
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r2304 # Here we save profile and cluster_dir in the context so they
# can be used in the batch script template as ${profile} and
# ${cluster_dir}
if cluster_dir is not None:
self.context['cluster_dir'] = cluster_dir
if profile is not None:
self.context['profile'] = profile
log.msg("Starting PBSControllerLauncher: %r" % self.args)
return super(PBSControllerLauncher, self).start(1)
class SSHControllerLauncher(SSHLauncher):
pass
#-----------------------------------------------------------------------------
# Engine launchers
#-----------------------------------------------------------------------------
def find_engine_cmd():
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r2310 """Find the command line ipengine program in a cross platform way."""
Brian Granger
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r2304 if sys.platform == 'win32':
# This logic is needed because the ipengine script doesn't
# always get installed in the same way or in the same location.
from IPython.kernel import ipengineapp
script_location = ipengineapp.__file__.replace('.pyc', '.py')
# The -u option here turns on unbuffered output, which is required
# on Win32 to prevent wierd conflict and problems with Twisted.
# Also, use sys.executable to make sure we are picking up the
# right python exe.
cmd = [sys.executable, '-u', script_location]
else:
# ipcontroller has to be on the PATH in this case.
cmd = ['ipengine']
return cmd
class LocalEngineLauncher(LocalProcessLauncher):
Brian Granger
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r2310 """Launch a single engine as a regular externall process."""
Brian Granger
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r2304
bgranger
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r2317 engine_cmd = List(find_engine_cmd(), config=True)
Brian Granger
Work on default config files and docstrings....
r2310 # Command line arguments for ipengine.
Brian Granger
Most of the new ipcluster is now working, including a nice client.
r2306 engine_args = List(
['--log-to-file','--log-level', '40'], config=True
)
Brian Granger
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r2304
def find_args(self):
return self.engine_cmd + self.engine_args
def start(self, profile=None, cluster_dir=None):
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r2310 """Start the engine by profile or cluster_dir."""
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r2304 if cluster_dir is not None:
self.engine_args.extend(['--cluster-dir', cluster_dir])
if profile is not None:
self.engine_args.extend(['--profile', profile])
return super(LocalEngineLauncher, self).start()
class LocalEngineSetLauncher(BaseLauncher):
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r2310 """Launch a set of engines as regular external processes."""
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r2304
Brian Granger
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r2310 # Command line arguments for ipengine.
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r2306 engine_args = List(
['--log-to-file','--log-level', '40'], config=True
)
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r2304
def __init__(self, working_dir, parent=None, name=None, config=None):
super(LocalEngineSetLauncher, self).__init__(
working_dir, parent, name, config
)
self.launchers = []
def start(self, n, profile=None, cluster_dir=None):
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r2310 """Start n engines by profile or cluster_dir."""
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r2304 dlist = []
for i in range(n):
el = LocalEngineLauncher(self.working_dir, self)
# Copy the engine args over to each engine launcher.
import copy
el.engine_args = copy.deepcopy(self.engine_args)
d = el.start(profile, cluster_dir)
if i==0:
log.msg("Starting LocalEngineSetLauncher: %r" % el.args)
self.launchers.append(el)
dlist.append(d)
# The consumeErrors here could be dangerous
dfinal = gatherBoth(dlist, consumeErrors=True)
dfinal.addCallback(self.notify_start)
return dfinal
def find_args(self):
return ['engine set']
def signal(self, sig):
dlist = []
for el in self.launchers:
d = el.signal(sig)
dlist.append(d)
dfinal = gatherBoth(dlist, consumeErrors=True)
return dfinal
def interrupt_then_kill(self, delay=1.0):
dlist = []
for el in self.launchers:
d = el.interrupt_then_kill(delay)
dlist.append(d)
dfinal = gatherBoth(dlist, consumeErrors=True)
return dfinal
def stop(self):
return self.interrupt_then_kill()
def observe_stop(self):
dlist = [el.observe_stop() for el in self.launchers]
dfinal = gatherBoth(dlist, consumeErrors=False)
dfinal.addCallback(self.notify_stop)
return dfinal
class MPIExecEngineSetLauncher(MPIExecLauncher):
bgranger
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r2317 engine_cmd = List(find_engine_cmd(), config=True)
Brian Granger
Work on default config files and docstrings....
r2310 # Command line arguments for ipengine.
Brian Granger
Most of the new ipcluster is now working, including a nice client.
r2306 engine_args = List(
['--log-to-file','--log-level', '40'], config=True
)
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r2304 n = Int(1, config=True)
def start(self, n, profile=None, cluster_dir=None):
Brian Granger
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r2310 """Start n engines by profile or cluster_dir."""
Brian Granger
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r2304 if cluster_dir is not None:
self.engine_args.extend(['--cluster-dir', cluster_dir])
if profile is not None:
self.engine_args.extend(['--profile', profile])
log.msg('Starting MPIExecEngineSetLauncher: %r' % self.args)
return super(MPIExecEngineSetLauncher, self).start(n)
def find_args(self):
return self.mpi_cmd + ['-n', self.n] + self.mpi_args + \
self.engine_cmd + self.engine_args
class WindowsHPCEngineSetLauncher(WindowsHPCLauncher):
pass
class PBSEngineSetLauncher(PBSLauncher):
Brian Granger
Work on default config files and docstrings....
r2310 batch_file_name = Unicode(u'pbs_batch_script_engines', config=True)
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Adding files for the refactored kernel scripts.
r2304 def start(self, n, profile=None, cluster_dir=None):
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Work on default config files and docstrings....
r2310 """Start n engines by profile or cluster_dir."""
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Adding files for the refactored kernel scripts.
r2304 if cluster_dir is not None:
self.program_args.extend(['--cluster-dir', cluster_dir])
if profile is not None:
self.program_args.extend(['-p', profile])
log.msg('Starting PBSEngineSetLauncher: %r' % self.args)
return super(PBSEngineSetLauncher, self).start(n)
class SSHEngineSetLauncher(BaseLauncher):
pass
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Most of the new ipcluster is now working, including a nice client.
r2306 #-----------------------------------------------------------------------------
# A launcher for ipcluster itself!
#-----------------------------------------------------------------------------
def find_ipcluster_cmd():
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Work on default config files and docstrings....
r2310 """Find the command line ipcluster program in a cross platform way."""
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Most of the new ipcluster is now working, including a nice client.
r2306 if sys.platform == 'win32':
# This logic is needed because the ipcluster script doesn't
# always get installed in the same way or in the same location.
from IPython.kernel import ipclusterapp
script_location = ipclusterapp.__file__.replace('.pyc', '.py')
# The -u option here turns on unbuffered output, which is required
# on Win32 to prevent wierd conflict and problems with Twisted.
# Also, use sys.executable to make sure we are picking up the
# right python exe.
cmd = [sys.executable, '-u', script_location]
else:
# ipcontroller has to be on the PATH in this case.
cmd = ['ipcluster']
return cmd
class IPClusterLauncher(LocalProcessLauncher):
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Work on default config files and docstrings....
r2310 """Launch the ipcluster program in an external process."""
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Most of the new ipcluster is now working, including a nice client.
r2306
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Made ipcontroller/ipengine/ipcluster command locations configurable....
r2317 ipcluster_cmd = List(find_ipcluster_cmd(), config=True)
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Work on default config files and docstrings....
r2310 # Command line arguments to pass to ipcluster.
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Most of the new ipcluster is now working, including a nice client.
r2306 ipcluster_args = List(
['--clean-logs', '--log-to-file', '--log-level', '40'], config=True)
ipcluster_subcommand = Str('start')
ipcluster_n = Int(2)
def find_args(self):
return self.ipcluster_cmd + [self.ipcluster_subcommand] + \
['-n', repr(self.ipcluster_n)] + self.ipcluster_args
def start(self):
log.msg("Starting ipcluster: %r" % self.args)
return super(IPClusterLauncher, self).start()
Brian Granger
Adding files for the refactored kernel scripts.
r2304