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1 | 1 | # -*- coding: utf-8 -*- |
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2 | 2 | """Sphinx directive to support embedded IPython code. |
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3 | 3 | |
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4 | 4 | This directive allows pasting of entire interactive IPython sessions, prompts |
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5 | 5 | and all, and their code will actually get re-executed at doc build time, with |
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6 | 6 | all prompts renumbered sequentially. It also allows you to input code as a pure |
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7 | 7 | python input by giving the argument python to the directive. The output looks |
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8 | 8 | like an interactive ipython section. |
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9 | 9 | |
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10 | 10 | To enable this directive, simply list it in your Sphinx ``conf.py`` file |
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11 | 11 | (making sure the directory where you placed it is visible to sphinx, as is |
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12 | 12 | needed for all Sphinx directives). For example, to enable syntax highlighting |
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13 | 13 | and the IPython directive:: |
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14 | 14 | |
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15 | 15 | extensions = ['IPython.sphinxext.ipython_console_highlighting', |
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16 | 16 | 'IPython.sphinxext.ipython_directive'] |
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17 | 17 | |
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18 | 18 | By default this directive assumes that your prompts are unchanged IPython ones, |
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19 | 19 | but this can be customized. The configurable options that can be placed in |
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20 | 20 | conf.py are: |
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21 | 21 | |
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22 | 22 | ipython_savefig_dir: |
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23 | 23 | The directory in which to save the figures. This is relative to the |
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24 | 24 | Sphinx source directory. The default is `html_static_path`. |
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25 | 25 | ipython_rgxin: |
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26 | 26 | The compiled regular expression to denote the start of IPython input |
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27 | 27 | lines. The default is re.compile('In \[(\d+)\]:\s?(.*)\s*'). You |
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28 | 28 | shouldn't need to change this. |
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29 | 29 | ipython_rgxout: |
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30 | 30 | The compiled regular expression to denote the start of IPython output |
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31 | 31 | lines. The default is re.compile('Out\[(\d+)\]:\s?(.*)\s*'). You |
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32 | 32 | shouldn't need to change this. |
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33 | 33 | ipython_promptin: |
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34 | 34 | The string to represent the IPython input prompt in the generated ReST. |
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35 | 35 | The default is 'In [%d]:'. This expects that the line numbers are used |
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36 | 36 | in the prompt. |
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37 | 37 | ipython_promptout: |
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38 | 38 | The string to represent the IPython prompt in the generated ReST. The |
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39 | 39 | default is 'Out [%d]:'. This expects that the line numbers are used |
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40 | 40 | in the prompt. |
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41 | 41 | ipython_mplbackend: |
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42 | 42 | The string which specifies if the embedded Sphinx shell should import |
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43 | 43 | Matplotlib and set the backend for each code-block. If `None`, or equal |
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44 | 44 | to '' or 'None', then `matplotlib` will not be automatically imported. If |
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45 | 45 | not `None`, then the value should specify a backend that is passed to |
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46 | 46 | `matplotlib.use()`. The default value is 'agg'. |
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47 | ipython_execlines: | |
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48 | A list of strings to be exec'd for each embedded Sphinx shell. Typical | |
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49 | usage is to make certain packages always available. If None, then | |
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50 | `['import numpy as np', 'from pylab import *']` is used. Set this to an | |
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51 | empty list if you wish to have no imports always available. | |
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47 | 52 | |
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48 | 53 | As an example, to use the IPython directive when `matplotlib` is not available, |
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49 | 54 | one sets the backend to `None`:: |
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50 | 55 | |
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51 | 56 | ipython_mplbacked = None |
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52 | 57 | |
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53 | 58 | |
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54 | 59 | ToDo |
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55 | 60 | ---- |
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56 | 61 | |
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57 | 62 | - Turn the ad-hoc test() function into a real test suite. |
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58 | 63 | - Break up ipython-specific functionality from matplotlib stuff into better |
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59 | 64 | separated code. |
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60 | 65 | |
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61 | 66 | Authors |
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62 | 67 | ------- |
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63 | 68 | |
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64 | 69 | - John D Hunter: orignal author. |
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65 | 70 | - Fernando Perez: refactoring, documentation, cleanups, port to 0.11. |
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66 | 71 | - VáclavŠmilauer <eudoxos-AT-arcig.cz>: Prompt generalizations. |
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67 | 72 | - Skipper Seabold, refactoring, cleanups, pure python addition |
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68 | 73 | """ |
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69 | 74 | from __future__ import print_function |
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70 | 75 | |
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71 | 76 | #----------------------------------------------------------------------------- |
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72 | 77 | # Imports |
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73 | 78 | #----------------------------------------------------------------------------- |
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74 | 79 | |
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75 | 80 | # Stdlib |
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76 | 81 | import os |
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77 | 82 | import re |
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78 | 83 | import sys |
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79 | 84 | import tempfile |
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80 | 85 | import ast |
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81 | 86 | |
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82 | 87 | # To keep compatibility with various python versions |
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83 | 88 | try: |
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84 | 89 | from hashlib import md5 |
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85 | 90 | except ImportError: |
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86 | 91 | from md5 import md5 |
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87 | 92 | |
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88 | 93 | # Third-party |
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89 | 94 | import sphinx |
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90 | 95 | from docutils.parsers.rst import directives |
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91 | 96 | from docutils import nodes |
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92 | 97 | from sphinx.util.compat import Directive |
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93 | 98 | |
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94 | 99 | # Our own |
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95 | 100 | from IPython import Config, InteractiveShell |
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96 | 101 | from IPython.core.profiledir import ProfileDir |
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97 | 102 | from IPython.utils import io |
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98 | 103 | from IPython.utils.py3compat import PY3 |
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99 | 104 | |
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100 | 105 | if PY3: |
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101 | 106 | from io import StringIO |
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102 | 107 | else: |
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103 | 108 | from StringIO import StringIO |
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104 | 109 | |
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105 | 110 | #----------------------------------------------------------------------------- |
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106 | 111 | # Globals |
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107 | 112 | #----------------------------------------------------------------------------- |
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108 | 113 | # for tokenizing blocks |
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109 | 114 | COMMENT, INPUT, OUTPUT = range(3) |
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110 | 115 | |
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111 | 116 | #----------------------------------------------------------------------------- |
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112 | 117 | # Functions and class declarations |
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113 | 118 | #----------------------------------------------------------------------------- |
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114 | 119 | def block_parser(part, rgxin, rgxout, fmtin, fmtout): |
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115 | 120 | """ |
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116 | 121 | part is a string of ipython text, comprised of at most one |
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117 | 122 | input, one ouput, comments, and blank lines. The block parser |
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118 | 123 | parses the text into a list of:: |
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119 | 124 | |
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120 | 125 | blocks = [ (TOKEN0, data0), (TOKEN1, data1), ...] |
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121 | 126 | |
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122 | 127 | where TOKEN is one of [COMMENT | INPUT | OUTPUT ] and |
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123 | 128 | data is, depending on the type of token:: |
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124 | 129 | |
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125 | 130 | COMMENT : the comment string |
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126 | 131 | |
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127 | 132 | INPUT: the (DECORATOR, INPUT_LINE, REST) where |
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128 | 133 | DECORATOR: the input decorator (or None) |
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129 | 134 | INPUT_LINE: the input as string (possibly multi-line) |
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130 | 135 | REST : any stdout generated by the input line (not OUTPUT) |
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131 | 136 | |
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132 | 137 | |
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133 | 138 | OUTPUT: the output string, possibly multi-line |
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134 | 139 | |
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135 | 140 | """ |
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136 | 141 | block = [] |
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137 | 142 | lines = part.split('\n') |
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138 | 143 | N = len(lines) |
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139 | 144 | i = 0 |
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140 | 145 | decorator = None |
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141 | 146 | while 1: |
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142 | 147 | |
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143 | 148 | if i==N: |
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144 | 149 | # nothing left to parse -- the last line |
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145 | 150 | break |
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146 | 151 | |
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147 | 152 | line = lines[i] |
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148 | 153 | i += 1 |
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149 | 154 | line_stripped = line.strip() |
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150 | 155 | if line_stripped.startswith('#'): |
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151 | 156 | block.append((COMMENT, line)) |
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152 | 157 | continue |
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153 | 158 | |
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154 | 159 | if line_stripped.startswith('@'): |
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155 | 160 | # we're assuming at most one decorator -- may need to |
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156 | 161 | # rethink |
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157 | 162 | decorator = line_stripped |
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158 | 163 | continue |
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159 | 164 | |
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160 | 165 | # does this look like an input line? |
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161 | 166 | matchin = rgxin.match(line) |
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162 | 167 | if matchin: |
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163 | 168 | lineno, inputline = int(matchin.group(1)), matchin.group(2) |
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164 | 169 | |
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165 | 170 | # the ....: continuation string |
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166 | 171 | continuation = ' %s:'%''.join(['.']*(len(str(lineno))+2)) |
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167 | 172 | Nc = len(continuation) |
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168 | 173 | # input lines can continue on for more than one line, if |
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169 | 174 | # we have a '\' line continuation char or a function call |
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170 | 175 | # echo line 'print'. The input line can only be |
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171 | 176 | # terminated by the end of the block or an output line, so |
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172 | 177 | # we parse out the rest of the input line if it is |
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173 | 178 | # multiline as well as any echo text |
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174 | 179 | |
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175 | 180 | rest = [] |
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176 | 181 | while i<N: |
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177 | 182 | |
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178 | 183 | # look ahead; if the next line is blank, or a comment, or |
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179 | 184 | # an output line, we're done |
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180 | 185 | |
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181 | 186 | nextline = lines[i] |
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182 | 187 | matchout = rgxout.match(nextline) |
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183 | 188 | #print "nextline=%s, continuation=%s, starts=%s"%(nextline, continuation, nextline.startswith(continuation)) |
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184 | 189 | if matchout or nextline.startswith('#'): |
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185 | 190 | break |
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186 | 191 | elif nextline.startswith(continuation): |
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187 | 192 | inputline += '\n' + nextline[Nc:] |
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188 | 193 | else: |
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189 | 194 | rest.append(nextline) |
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190 | 195 | i+= 1 |
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191 | 196 | |
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192 | 197 | block.append((INPUT, (decorator, inputline, '\n'.join(rest)))) |
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193 | 198 | continue |
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194 | 199 | |
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195 | 200 | # if it looks like an output line grab all the text to the end |
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196 | 201 | # of the block |
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197 | 202 | matchout = rgxout.match(line) |
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198 | 203 | if matchout: |
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199 | 204 | lineno, output = int(matchout.group(1)), matchout.group(2) |
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200 | 205 | if i<N-1: |
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201 | 206 | output = '\n'.join([output] + lines[i:]) |
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202 | 207 | |
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203 | 208 | block.append((OUTPUT, output)) |
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204 | 209 | break |
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205 | 210 | |
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206 | 211 | return block |
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207 | 212 | |
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208 | 213 | class EmbeddedSphinxShell(object): |
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209 | 214 | """An embedded IPython instance to run inside Sphinx""" |
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210 | 215 | |
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211 | def __init__(self): | |
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216 | def __init__(self, exec_lines=None): | |
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212 | 217 | |
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213 | 218 | self.cout = StringIO() |
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214 | 219 | |
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220 | if exec_lines is None: | |
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221 | exec_lines = ['import numpy as np', 'from pylab import *'] | |
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215 | 222 | |
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216 | 223 | # Create config object for IPython |
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217 | 224 | config = Config() |
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218 | 225 | config.Global.display_banner = False |
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219 |
config.Global.exec_lines = |
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220 | 'from pylab import *' | |
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221 | ] | |
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226 | config.Global.exec_lines = exec_lines | |
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222 | 227 | config.InteractiveShell.autocall = False |
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223 | 228 | config.InteractiveShell.autoindent = False |
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224 | 229 | config.InteractiveShell.colors = 'NoColor' |
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225 | 230 | |
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226 | 231 | # create a profile so instance history isn't saved |
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227 | 232 | tmp_profile_dir = tempfile.mkdtemp(prefix='profile_') |
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228 | 233 | profname = 'auto_profile_sphinx_build' |
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229 | 234 | pdir = os.path.join(tmp_profile_dir,profname) |
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230 | 235 | profile = ProfileDir.create_profile_dir(pdir) |
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231 | 236 | |
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232 | 237 | # Create and initialize ipython, but don't start its mainloop |
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233 | 238 | IP = InteractiveShell.instance(config=config, profile_dir=profile) |
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234 | 239 | # io.stdout redirect must be done *after* instantiating InteractiveShell |
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235 | 240 | io.stdout = self.cout |
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236 | 241 | io.stderr = self.cout |
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237 | 242 | |
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238 | 243 | # For debugging, so we can see normal output, use this: |
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239 | 244 | #from IPython.utils.io import Tee |
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240 | 245 | #io.stdout = Tee(self.cout, channel='stdout') # dbg |
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241 | 246 | #io.stderr = Tee(self.cout, channel='stderr') # dbg |
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242 | 247 | |
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243 | 248 | # Store a few parts of IPython we'll need. |
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244 | 249 | self.IP = IP |
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245 | 250 | self.user_ns = self.IP.user_ns |
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246 | 251 | self.user_global_ns = self.IP.user_global_ns |
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247 | 252 | |
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248 | 253 | self.input = '' |
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249 | 254 | self.output = '' |
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250 | 255 | |
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251 | 256 | self.is_verbatim = False |
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252 | 257 | self.is_doctest = False |
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253 | 258 | self.is_suppress = False |
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254 | 259 | |
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255 | 260 | # on the first call to the savefig decorator, we'll import |
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256 | 261 | # pyplot as plt so we can make a call to the plt.gcf().savefig |
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257 | 262 | self._pyplot_imported = False |
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258 | 263 | |
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259 | 264 | def clear_cout(self): |
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260 | 265 | self.cout.seek(0) |
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261 | 266 | self.cout.truncate(0) |
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262 | 267 | |
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263 | 268 | def process_input_line(self, line, store_history=True): |
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264 | 269 | """process the input, capturing stdout""" |
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265 | 270 | #print "input='%s'"%self.input |
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266 | 271 | stdout = sys.stdout |
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267 | 272 | splitter = self.IP.input_splitter |
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268 | 273 | try: |
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269 | 274 | sys.stdout = self.cout |
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270 | 275 | splitter.push(line) |
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271 | 276 | more = splitter.push_accepts_more() |
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272 | 277 | if not more: |
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273 | 278 | source_raw = splitter.source_raw_reset()[1] |
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274 | 279 | self.IP.run_cell(source_raw, store_history=store_history) |
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275 | 280 | finally: |
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276 | 281 | sys.stdout = stdout |
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277 | 282 | |
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278 | 283 | def process_image(self, decorator): |
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279 | 284 | """ |
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280 | 285 | # build out an image directive like |
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281 | 286 | # .. image:: somefile.png |
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282 | 287 | # :width 4in |
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283 | 288 | # |
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284 | 289 | # from an input like |
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285 | 290 | # savefig somefile.png width=4in |
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286 | 291 | """ |
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287 | 292 | savefig_dir = self.savefig_dir |
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288 | 293 | source_dir = self.source_dir |
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289 | 294 | saveargs = decorator.split(' ') |
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290 | 295 | filename = saveargs[1] |
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291 | 296 | # insert relative path to image file in source |
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292 | 297 | outfile = os.path.relpath(os.path.join(savefig_dir,filename), |
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293 | 298 | source_dir) |
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294 | 299 | |
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295 | 300 | imagerows = ['.. image:: %s'%outfile] |
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296 | 301 | |
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297 | 302 | for kwarg in saveargs[2:]: |
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298 | 303 | arg, val = kwarg.split('=') |
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299 | 304 | arg = arg.strip() |
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300 | 305 | val = val.strip() |
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301 | 306 | imagerows.append(' :%s: %s'%(arg, val)) |
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302 | 307 | |
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303 | 308 | image_file = os.path.basename(outfile) # only return file name |
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304 | 309 | image_directive = '\n'.join(imagerows) |
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305 | 310 | return image_file, image_directive |
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306 | 311 | |
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307 | 312 | |
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308 | 313 | # Callbacks for each type of token |
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309 | 314 | def process_input(self, data, input_prompt, lineno): |
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310 | 315 | """Process data block for INPUT token.""" |
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311 | 316 | decorator, input, rest = data |
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312 | 317 | image_file = None |
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313 | 318 | image_directive = None |
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314 | 319 | #print 'INPUT:', data # dbg |
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315 | 320 | is_verbatim = decorator=='@verbatim' or self.is_verbatim |
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316 | 321 | is_doctest = decorator=='@doctest' or self.is_doctest |
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317 | 322 | is_suppress = decorator=='@suppress' or self.is_suppress |
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318 | 323 | is_savefig = decorator is not None and \ |
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319 | 324 | decorator.startswith('@savefig') |
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320 | 325 | |
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321 | 326 | input_lines = input.split('\n') |
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322 | 327 | if len(input_lines) > 1: |
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323 | 328 | if input_lines[-1] != "": |
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324 | 329 | input_lines.append('') # make sure there's a blank line |
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325 | 330 | # so splitter buffer gets reset |
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326 | 331 | |
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327 | 332 | continuation = ' %s:'%''.join(['.']*(len(str(lineno))+2)) |
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328 | 333 | Nc = len(continuation) |
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329 | 334 | |
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330 | 335 | if is_savefig: |
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331 | 336 | image_file, image_directive = self.process_image(decorator) |
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332 | 337 | |
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333 | 338 | ret = [] |
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334 | 339 | is_semicolon = False |
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335 | 340 | |
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336 | 341 | for i, line in enumerate(input_lines): |
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337 | 342 | if line.endswith(';'): |
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338 | 343 | is_semicolon = True |
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339 | 344 | |
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340 | 345 | if i==0: |
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341 | 346 | # process the first input line |
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342 | 347 | if is_verbatim: |
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343 | 348 | self.process_input_line('') |
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344 | 349 | self.IP.execution_count += 1 # increment it anyway |
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345 | 350 | else: |
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346 | 351 | # only submit the line in non-verbatim mode |
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347 | 352 | self.process_input_line(line, store_history=True) |
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348 | 353 | formatted_line = '%s %s'%(input_prompt, line) |
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349 | 354 | else: |
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350 | 355 | # process a continuation line |
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351 | 356 | if not is_verbatim: |
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352 | 357 | self.process_input_line(line, store_history=True) |
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353 | 358 | |
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354 | 359 | formatted_line = '%s %s'%(continuation, line) |
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355 | 360 | |
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356 | 361 | if not is_suppress: |
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357 | 362 | ret.append(formatted_line) |
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358 | 363 | |
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359 | 364 | if not is_suppress and len(rest.strip()) and is_verbatim: |
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360 | 365 | # the "rest" is the standard output of the |
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361 | 366 | # input, which needs to be added in |
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362 | 367 | # verbatim mode |
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363 | 368 | ret.append(rest) |
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364 | 369 | |
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365 | 370 | self.cout.seek(0) |
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366 | 371 | output = self.cout.read() |
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367 | 372 | if not is_suppress and not is_semicolon: |
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368 | 373 | ret.append(output) |
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369 | 374 | elif is_semicolon: # get spacing right |
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370 | 375 | ret.append('') |
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371 | 376 | |
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372 | 377 | self.cout.truncate(0) |
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373 | 378 | return (ret, input_lines, output, is_doctest, image_file, |
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374 | 379 | image_directive) |
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375 | 380 | #print 'OUTPUT', output # dbg |
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376 | 381 | |
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377 | 382 | def process_output(self, data, output_prompt, |
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378 | 383 | input_lines, output, is_doctest, image_file): |
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379 | 384 | """Process data block for OUTPUT token.""" |
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380 | 385 | if is_doctest: |
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381 | 386 | submitted = data.strip() |
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382 | 387 | found = output |
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383 | 388 | if found is not None: |
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384 | 389 | found = found.strip() |
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385 | 390 | |
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386 | 391 | # XXX - fperez: in 0.11, 'output' never comes with the prompt |
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387 | 392 | # in it, just the actual output text. So I think all this code |
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388 | 393 | # can be nuked... |
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389 | 394 | |
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390 | 395 | # the above comment does not appear to be accurate... (minrk) |
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391 | 396 | |
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392 | 397 | ind = found.find(output_prompt) |
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393 | 398 | if ind<0: |
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394 | 399 | e='output prompt="%s" does not match out line=%s' % \ |
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395 | 400 | (output_prompt, found) |
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396 | 401 | raise RuntimeError(e) |
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397 | 402 | found = found[len(output_prompt):].strip() |
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398 | 403 | |
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399 | 404 | if found!=submitted: |
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400 | 405 | e = ('doctest failure for input_lines="%s" with ' |
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401 | 406 | 'found_output="%s" and submitted output="%s"' % |
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402 | 407 | (input_lines, found, submitted) ) |
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403 | 408 | raise RuntimeError(e) |
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404 | 409 | #print 'doctest PASSED for input_lines="%s" with found_output="%s" and submitted output="%s"'%(input_lines, found, submitted) |
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405 | 410 | |
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406 | 411 | def process_comment(self, data): |
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407 | 412 | """Process data fPblock for COMMENT token.""" |
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408 | 413 | if not self.is_suppress: |
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409 | 414 | return [data] |
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410 | 415 | |
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411 | 416 | def save_image(self, image_file): |
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412 | 417 | """ |
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413 | 418 | Saves the image file to disk. |
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414 | 419 | """ |
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415 | 420 | self.ensure_pyplot() |
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416 | 421 | command = 'plt.gcf().savefig("%s")'%image_file |
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417 | 422 | #print 'SAVEFIG', command # dbg |
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418 | 423 | self.process_input_line('bookmark ipy_thisdir', store_history=False) |
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419 | 424 | self.process_input_line('cd -b ipy_savedir', store_history=False) |
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420 | 425 | self.process_input_line(command, store_history=False) |
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421 | 426 | self.process_input_line('cd -b ipy_thisdir', store_history=False) |
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422 | 427 | self.process_input_line('bookmark -d ipy_thisdir', store_history=False) |
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423 | 428 | self.clear_cout() |
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424 | 429 | |
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425 | 430 | |
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426 | 431 | def process_block(self, block): |
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427 | 432 | """ |
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428 | 433 | process block from the block_parser and return a list of processed lines |
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429 | 434 | """ |
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430 | 435 | ret = [] |
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431 | 436 | output = None |
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432 | 437 | input_lines = None |
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433 | 438 | lineno = self.IP.execution_count |
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434 | 439 | |
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435 | 440 | input_prompt = self.promptin%lineno |
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436 | 441 | output_prompt = self.promptout%lineno |
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437 | 442 | image_file = None |
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438 | 443 | image_directive = None |
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439 | 444 | |
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440 | 445 | for token, data in block: |
|
441 | 446 | if token==COMMENT: |
|
442 | 447 | out_data = self.process_comment(data) |
|
443 | 448 | elif token==INPUT: |
|
444 | 449 | (out_data, input_lines, output, is_doctest, image_file, |
|
445 | 450 | image_directive) = \ |
|
446 | 451 | self.process_input(data, input_prompt, lineno) |
|
447 | 452 | elif token==OUTPUT: |
|
448 | 453 | out_data = \ |
|
449 | 454 | self.process_output(data, output_prompt, |
|
450 | 455 | input_lines, output, is_doctest, |
|
451 | 456 | image_file) |
|
452 | 457 | if out_data: |
|
453 | 458 | ret.extend(out_data) |
|
454 | 459 | |
|
455 | 460 | # save the image files |
|
456 | 461 | if image_file is not None: |
|
457 | 462 | self.save_image(image_file) |
|
458 | 463 | |
|
459 | 464 | return ret, image_directive |
|
460 | 465 | |
|
461 | 466 | def ensure_pyplot(self): |
|
462 | 467 | if self._pyplot_imported: |
|
463 | 468 | return |
|
464 | 469 | self.process_input_line('import matplotlib.pyplot as plt', |
|
465 | 470 | store_history=False) |
|
466 | 471 | |
|
467 | 472 | def process_pure_python(self, content): |
|
468 | 473 | """ |
|
469 | 474 | content is a list of strings. it is unedited directive conent |
|
470 | 475 | |
|
471 | 476 | This runs it line by line in the InteractiveShell, prepends |
|
472 | 477 | prompts as needed capturing stderr and stdout, then returns |
|
473 | 478 | the content as a list as if it were ipython code |
|
474 | 479 | """ |
|
475 | 480 | output = [] |
|
476 | 481 | savefig = False # keep up with this to clear figure |
|
477 | 482 | multiline = False # to handle line continuation |
|
478 | 483 | multiline_start = None |
|
479 | 484 | fmtin = self.promptin |
|
480 | 485 | |
|
481 | 486 | ct = 0 |
|
482 | 487 | |
|
483 | 488 | for lineno, line in enumerate(content): |
|
484 | 489 | |
|
485 | 490 | line_stripped = line.strip() |
|
486 | 491 | if not len(line): |
|
487 | 492 | output.append(line) |
|
488 | 493 | continue |
|
489 | 494 | |
|
490 | 495 | # handle decorators |
|
491 | 496 | if line_stripped.startswith('@'): |
|
492 | 497 | output.extend([line]) |
|
493 | 498 | if 'savefig' in line: |
|
494 | 499 | savefig = True # and need to clear figure |
|
495 | 500 | continue |
|
496 | 501 | |
|
497 | 502 | # handle comments |
|
498 | 503 | if line_stripped.startswith('#'): |
|
499 | 504 | output.extend([line]) |
|
500 | 505 | continue |
|
501 | 506 | |
|
502 | 507 | # deal with lines checking for multiline |
|
503 | 508 | continuation = u' %s:'% ''.join(['.']*(len(str(ct))+2)) |
|
504 | 509 | if not multiline: |
|
505 | 510 | modified = u"%s %s" % (fmtin % ct, line_stripped) |
|
506 | 511 | output.append(modified) |
|
507 | 512 | ct += 1 |
|
508 | 513 | try: |
|
509 | 514 | ast.parse(line_stripped) |
|
510 | 515 | output.append(u'') |
|
511 | 516 | except Exception: # on a multiline |
|
512 | 517 | multiline = True |
|
513 | 518 | multiline_start = lineno |
|
514 | 519 | else: # still on a multiline |
|
515 | 520 | modified = u'%s %s' % (continuation, line) |
|
516 | 521 | output.append(modified) |
|
517 | 522 | |
|
518 | 523 | # if the next line is indented, it should be part of multiline |
|
519 | 524 | if len(content) > lineno + 1: |
|
520 | 525 | nextline = content[lineno + 1] |
|
521 | 526 | if len(nextline) - len(nextline.lstrip()) > 3: |
|
522 | 527 | continue |
|
523 | 528 | try: |
|
524 | 529 | mod = ast.parse( |
|
525 | 530 | '\n'.join(content[multiline_start:lineno+1])) |
|
526 | 531 | if isinstance(mod.body[0], ast.FunctionDef): |
|
527 | 532 | # check to see if we have the whole function |
|
528 | 533 | for element in mod.body[0].body: |
|
529 | 534 | if isinstance(element, ast.Return): |
|
530 | 535 | multiline = False |
|
531 | 536 | else: |
|
532 | 537 | output.append(u'') |
|
533 | 538 | multiline = False |
|
534 | 539 | except Exception: |
|
535 | 540 | pass |
|
536 | 541 | |
|
537 | 542 | if savefig: # clear figure if plotted |
|
538 | 543 | self.ensure_pyplot() |
|
539 | 544 | self.process_input_line('plt.clf()', store_history=False) |
|
540 | 545 | self.clear_cout() |
|
541 | 546 | savefig = False |
|
542 | 547 | |
|
543 | 548 | return output |
|
544 | 549 | |
|
545 | 550 | class IPythonDirective(Directive): |
|
546 | 551 | |
|
547 | 552 | has_content = True |
|
548 | 553 | required_arguments = 0 |
|
549 | 554 | optional_arguments = 4 # python, suppress, verbatim, doctest |
|
550 | 555 | final_argumuent_whitespace = True |
|
551 | 556 | option_spec = { 'python': directives.unchanged, |
|
552 | 557 | 'suppress' : directives.flag, |
|
553 | 558 | 'verbatim' : directives.flag, |
|
554 | 559 | 'doctest' : directives.flag, |
|
555 | 560 | } |
|
556 | 561 | |
|
557 | 562 | shell = None |
|
558 | 563 | |
|
559 | 564 | seen_docs = set() |
|
560 | 565 | |
|
561 | 566 | def get_config_options(self): |
|
562 | 567 | # contains sphinx configuration variables |
|
563 | 568 | config = self.state.document.settings.env.config |
|
564 | 569 | |
|
565 | 570 | # get config variables to set figure output directory |
|
566 | 571 | confdir = self.state.document.settings.env.app.confdir |
|
567 | 572 | savefig_dir = config.ipython_savefig_dir |
|
568 | 573 | source_dir = os.path.dirname(self.state.document.current_source) |
|
569 | 574 | if savefig_dir is None: |
|
570 | 575 | savefig_dir = config.html_static_path |
|
571 | 576 | if isinstance(savefig_dir, list): |
|
572 | 577 | savefig_dir = savefig_dir[0] # safe to assume only one path? |
|
573 | 578 | savefig_dir = os.path.join(confdir, savefig_dir) |
|
574 | 579 | |
|
575 | 580 | # get regex and prompt stuff |
|
576 | 581 | rgxin = config.ipython_rgxin |
|
577 | 582 | rgxout = config.ipython_rgxout |
|
578 | 583 | promptin = config.ipython_promptin |
|
579 | 584 | promptout = config.ipython_promptout |
|
580 | 585 | mplbackend = config.ipython_mplbackend |
|
586 | exec_lines = config.ipython_execlines | |
|
581 | 587 | |
|
582 | 588 | return (savefig_dir, source_dir, rgxin, rgxout, |
|
583 | promptin, promptout, mplbackend) | |
|
589 | promptin, promptout, mplbackend, exec_lines) | |
|
584 | 590 | |
|
585 | 591 | def setup(self): |
|
586 | 592 | # Get configuration values. |
|
587 | (savefig_dir, source_dir, rgxin, rgxout, | |
|
588 |
|
|
|
593 | (savefig_dir, source_dir, rgxin, rgxout, promptin, | |
|
594 | promptout, mplbackend, exec_lines) = self.get_config_options() | |
|
589 | 595 | |
|
590 | 596 | if self.shell is None: |
|
591 | self.shell = EmbeddedSphinxShell() | |
|
597 | self.shell = EmbeddedSphinxShell(exec_lines) | |
|
592 | 598 | if mplbackend: |
|
593 | 599 | # Each ipython code-block is run in a separate process. |
|
594 | 600 | import matplotlib |
|
595 | 601 | matplotlib.use(mplbackend) |
|
596 | 602 | |
|
597 | 603 | # reset the execution count if we haven't processed this doc |
|
598 | 604 | #NOTE: this may be borked if there are multiple seen_doc tmp files |
|
599 | 605 | #check time stamp? |
|
600 | 606 | if not self.state.document.current_source in self.seen_docs: |
|
601 | 607 | self.shell.IP.history_manager.reset() |
|
602 | 608 | self.shell.IP.execution_count = 1 |
|
603 | 609 | self.seen_docs.add(self.state.document.current_source) |
|
604 | 610 | |
|
605 | 611 | # and attach to shell so we don't have to pass them around |
|
606 | 612 | self.shell.rgxin = rgxin |
|
607 | 613 | self.shell.rgxout = rgxout |
|
608 | 614 | self.shell.promptin = promptin |
|
609 | 615 | self.shell.promptout = promptout |
|
610 | 616 | self.shell.savefig_dir = savefig_dir |
|
611 | 617 | self.shell.source_dir = source_dir |
|
612 | 618 | |
|
613 | 619 | # setup bookmark for saving figures directory |
|
614 | 620 | self.shell.process_input_line('bookmark ipy_savedir %s'%savefig_dir, |
|
615 | 621 | store_history=False) |
|
616 | 622 | self.shell.clear_cout() |
|
617 | 623 | |
|
618 | 624 | return rgxin, rgxout, promptin, promptout |
|
619 | 625 | |
|
620 | 626 | |
|
621 | 627 | def teardown(self): |
|
622 | 628 | # delete last bookmark |
|
623 | 629 | self.shell.process_input_line('bookmark -d ipy_savedir', |
|
624 | 630 | store_history=False) |
|
625 | 631 | self.shell.clear_cout() |
|
626 | 632 | |
|
627 | 633 | def run(self): |
|
628 | 634 | debug = False |
|
629 | 635 | |
|
630 | 636 | #TODO, any reason block_parser can't be a method of embeddable shell |
|
631 | 637 | # then we wouldn't have to carry these around |
|
632 | 638 | rgxin, rgxout, promptin, promptout = self.setup() |
|
633 | 639 | |
|
634 | 640 | options = self.options |
|
635 | 641 | self.shell.is_suppress = 'suppress' in options |
|
636 | 642 | self.shell.is_doctest = 'doctest' in options |
|
637 | 643 | self.shell.is_verbatim = 'verbatim' in options |
|
638 | 644 | |
|
639 | 645 | # handle pure python code |
|
640 | 646 | if 'python' in self.arguments: |
|
641 | 647 | content = self.content |
|
642 | 648 | self.content = self.shell.process_pure_python(content) |
|
643 | 649 | |
|
644 | 650 | parts = '\n'.join(self.content).split('\n\n') |
|
645 | 651 | |
|
646 | 652 | lines = ['.. code-block:: ipython',''] |
|
647 | 653 | figures = [] |
|
648 | 654 | |
|
649 | 655 | for part in parts: |
|
650 | 656 | block = block_parser(part, rgxin, rgxout, promptin, promptout) |
|
651 | 657 | if len(block): |
|
652 | 658 | rows, figure = self.shell.process_block(block) |
|
653 | 659 | for row in rows: |
|
654 | 660 | lines.extend([' %s'%line for line in row.split('\n')]) |
|
655 | 661 | |
|
656 | 662 | if figure is not None: |
|
657 | 663 | figures.append(figure) |
|
658 | 664 | |
|
659 | 665 | for figure in figures: |
|
660 | 666 | lines.append('') |
|
661 | 667 | lines.extend(figure.split('\n')) |
|
662 | 668 | lines.append('') |
|
663 | 669 | |
|
664 | 670 | if len(lines)>2: |
|
665 | 671 | if debug: |
|
666 | 672 | print('\n'.join(lines)) |
|
667 | 673 | else: |
|
668 | 674 | # This is what makes the lines appear in the final output. |
|
669 | 675 | self.state_machine.insert_input( |
|
670 | 676 | lines, self.state_machine.input_lines.source(0)) |
|
671 | 677 | |
|
672 | 678 | # cleanup |
|
673 | 679 | self.teardown() |
|
674 | 680 | |
|
675 | 681 | return []#, imgnode] |
|
676 | 682 | |
|
677 | 683 | # Enable as a proper Sphinx directive |
|
678 | 684 | def setup(app): |
|
679 | 685 | setup.app = app |
|
680 | 686 | |
|
681 | 687 | app.add_directive('ipython', IPythonDirective) |
|
682 | 688 | app.add_config_value('ipython_savefig_dir', None, 'env') |
|
683 | 689 | app.add_config_value('ipython_rgxin', |
|
684 | 690 | re.compile('In \[(\d+)\]:\s?(.*)\s*'), 'env') |
|
685 | 691 | app.add_config_value('ipython_rgxout', |
|
686 | 692 | re.compile('Out\[(\d+)\]:\s?(.*)\s*'), 'env') |
|
687 | 693 | app.add_config_value('ipython_promptin', 'In [%d]:', 'env') |
|
688 | 694 | app.add_config_value('ipython_promptout', 'Out[%d]:', 'env') |
|
689 | 695 | app.add_config_value('ipython_mplbackend', 'agg', 'env') |
|
690 | ||
|
696 | app.add_config_value('ipython_execlines', None, 'env') | |
|
691 | 697 | |
|
692 | 698 | # Simple smoke test, needs to be converted to a proper automatic test. |
|
693 | 699 | def test(): |
|
694 | 700 | |
|
695 | 701 | examples = [ |
|
696 | 702 | r""" |
|
697 | 703 | In [9]: pwd |
|
698 | 704 | Out[9]: '/home/jdhunter/py4science/book' |
|
699 | 705 | |
|
700 | 706 | In [10]: cd bookdata/ |
|
701 | 707 | /home/jdhunter/py4science/book/bookdata |
|
702 | 708 | |
|
703 | 709 | In [2]: from pylab import * |
|
704 | 710 | |
|
705 | 711 | In [2]: ion() |
|
706 | 712 | |
|
707 | 713 | In [3]: im = imread('stinkbug.png') |
|
708 | 714 | |
|
709 | 715 | @savefig mystinkbug.png width=4in |
|
710 | 716 | In [4]: imshow(im) |
|
711 | 717 | Out[4]: <matplotlib.image.AxesImage object at 0x39ea850> |
|
712 | 718 | |
|
713 | 719 | """, |
|
714 | 720 | r""" |
|
715 | 721 | |
|
716 | 722 | In [1]: x = 'hello world' |
|
717 | 723 | |
|
718 | 724 | # string methods can be |
|
719 | 725 | # used to alter the string |
|
720 | 726 | @doctest |
|
721 | 727 | In [2]: x.upper() |
|
722 | 728 | Out[2]: 'HELLO WORLD' |
|
723 | 729 | |
|
724 | 730 | @verbatim |
|
725 | 731 | In [3]: x.st<TAB> |
|
726 | 732 | x.startswith x.strip |
|
727 | 733 | """, |
|
728 | 734 | r""" |
|
729 | 735 | |
|
730 | 736 | In [130]: url = 'http://ichart.finance.yahoo.com/table.csv?s=CROX\ |
|
731 | 737 | .....: &d=9&e=22&f=2009&g=d&a=1&br=8&c=2006&ignore=.csv' |
|
732 | 738 | |
|
733 | 739 | In [131]: print url.split('&') |
|
734 | 740 | ['http://ichart.finance.yahoo.com/table.csv?s=CROX', 'd=9', 'e=22', 'f=2009', 'g=d', 'a=1', 'b=8', 'c=2006', 'ignore=.csv'] |
|
735 | 741 | |
|
736 | 742 | In [60]: import urllib |
|
737 | 743 | |
|
738 | 744 | """, |
|
739 | 745 | r"""\ |
|
740 | 746 | |
|
741 | 747 | In [133]: import numpy.random |
|
742 | 748 | |
|
743 | 749 | @suppress |
|
744 | 750 | In [134]: numpy.random.seed(2358) |
|
745 | 751 | |
|
746 | 752 | @doctest |
|
747 | 753 | In [135]: numpy.random.rand(10,2) |
|
748 | 754 | Out[135]: |
|
749 | 755 | array([[ 0.64524308, 0.59943846], |
|
750 | 756 | [ 0.47102322, 0.8715456 ], |
|
751 | 757 | [ 0.29370834, 0.74776844], |
|
752 | 758 | [ 0.99539577, 0.1313423 ], |
|
753 | 759 | [ 0.16250302, 0.21103583], |
|
754 | 760 | [ 0.81626524, 0.1312433 ], |
|
755 | 761 | [ 0.67338089, 0.72302393], |
|
756 | 762 | [ 0.7566368 , 0.07033696], |
|
757 | 763 | [ 0.22591016, 0.77731835], |
|
758 | 764 | [ 0.0072729 , 0.34273127]]) |
|
759 | 765 | |
|
760 | 766 | """, |
|
761 | 767 | |
|
762 | 768 | r""" |
|
763 | 769 | In [106]: print x |
|
764 | 770 | jdh |
|
765 | 771 | |
|
766 | 772 | In [109]: for i in range(10): |
|
767 | 773 | .....: print i |
|
768 | 774 | .....: |
|
769 | 775 | .....: |
|
770 | 776 | 0 |
|
771 | 777 | 1 |
|
772 | 778 | 2 |
|
773 | 779 | 3 |
|
774 | 780 | 4 |
|
775 | 781 | 5 |
|
776 | 782 | 6 |
|
777 | 783 | 7 |
|
778 | 784 | 8 |
|
779 | 785 | 9 |
|
780 | 786 | """, |
|
781 | 787 | |
|
782 | 788 | r""" |
|
783 | 789 | |
|
784 | 790 | In [144]: from pylab import * |
|
785 | 791 | |
|
786 | 792 | In [145]: ion() |
|
787 | 793 | |
|
788 | 794 | # use a semicolon to suppress the output |
|
789 | 795 | @savefig test_hist.png width=4in |
|
790 | 796 | In [151]: hist(np.random.randn(10000), 100); |
|
791 | 797 | |
|
792 | 798 | |
|
793 | 799 | @savefig test_plot.png width=4in |
|
794 | 800 | In [151]: plot(np.random.randn(10000), 'o'); |
|
795 | 801 | """, |
|
796 | 802 | |
|
797 | 803 | r""" |
|
798 | 804 | # use a semicolon to suppress the output |
|
799 | 805 | In [151]: plt.clf() |
|
800 | 806 | |
|
801 | 807 | @savefig plot_simple.png width=4in |
|
802 | 808 | In [151]: plot([1,2,3]) |
|
803 | 809 | |
|
804 | 810 | @savefig hist_simple.png width=4in |
|
805 | 811 | In [151]: hist(np.random.randn(10000), 100); |
|
806 | 812 | |
|
807 | 813 | """, |
|
808 | 814 | r""" |
|
809 | 815 | # update the current fig |
|
810 | 816 | In [151]: ylabel('number') |
|
811 | 817 | |
|
812 | 818 | In [152]: title('normal distribution') |
|
813 | 819 | |
|
814 | 820 | |
|
815 | 821 | @savefig hist_with_text.png |
|
816 | 822 | In [153]: grid(True) |
|
817 | 823 | |
|
818 | 824 | """, |
|
819 | 825 | ] |
|
820 | 826 | # skip local-file depending first example: |
|
821 | 827 | examples = examples[1:] |
|
822 | 828 | |
|
823 | 829 | #ipython_directive.DEBUG = True # dbg |
|
824 | 830 | #options = dict(suppress=True) # dbg |
|
825 | 831 | options = dict() |
|
826 | 832 | for example in examples: |
|
827 | 833 | content = example.split('\n') |
|
828 | 834 | IPythonDirective('debug', arguments=None, options=options, |
|
829 | 835 | content=content, lineno=0, |
|
830 | 836 | content_offset=None, block_text=None, |
|
831 | 837 | state=None, state_machine=None, |
|
832 | 838 | ) |
|
833 | 839 | |
|
834 | 840 | # Run test suite as a script |
|
835 | 841 | if __name__=='__main__': |
|
836 | 842 | if not os.path.isdir('_static'): |
|
837 | 843 | os.mkdir('_static') |
|
838 | 844 | test() |
|
839 | 845 | print('All OK? Check figures in _static/') |
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