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@@ -1,3044 +1,3048 b''
1 # -*- coding: utf-8 -*-
1 # -*- coding: utf-8 -*-
2 """Main IPython class."""
2 """Main IPython class."""
3
3
4 #-----------------------------------------------------------------------------
4 #-----------------------------------------------------------------------------
5 # Copyright (C) 2001 Janko Hauser <jhauser@zscout.de>
5 # Copyright (C) 2001 Janko Hauser <jhauser@zscout.de>
6 # Copyright (C) 2001-2007 Fernando Perez. <fperez@colorado.edu>
6 # Copyright (C) 2001-2007 Fernando Perez. <fperez@colorado.edu>
7 # Copyright (C) 2008-2011 The IPython Development Team
7 # Copyright (C) 2008-2011 The IPython Development Team
8 #
8 #
9 # Distributed under the terms of the BSD License. The full license is in
9 # Distributed under the terms of the BSD License. The full license is in
10 # the file COPYING, distributed as part of this software.
10 # the file COPYING, distributed as part of this software.
11 #-----------------------------------------------------------------------------
11 #-----------------------------------------------------------------------------
12
12
13 #-----------------------------------------------------------------------------
13 #-----------------------------------------------------------------------------
14 # Imports
14 # Imports
15 #-----------------------------------------------------------------------------
15 #-----------------------------------------------------------------------------
16
16
17 from __future__ import with_statement
17 from __future__ import with_statement
18 from __future__ import absolute_import
18 from __future__ import absolute_import
19 from __future__ import print_function
19 from __future__ import print_function
20
20
21 import __builtin__ as builtin_mod
21 import __builtin__ as builtin_mod
22 import __future__
22 import __future__
23 import abc
23 import abc
24 import ast
24 import ast
25 import atexit
25 import atexit
26 import os
26 import os
27 import re
27 import re
28 import runpy
28 import runpy
29 import sys
29 import sys
30 import tempfile
30 import tempfile
31 import types
31 import types
32 import urllib
32 import urllib
33 from io import open as io_open
33 from io import open as io_open
34
34
35 from IPython.config.configurable import SingletonConfigurable
35 from IPython.config.configurable import SingletonConfigurable
36 from IPython.core import debugger, oinspect
36 from IPython.core import debugger, oinspect
37 from IPython.core import magic
37 from IPython.core import magic
38 from IPython.core import page
38 from IPython.core import page
39 from IPython.core import prefilter
39 from IPython.core import prefilter
40 from IPython.core import shadowns
40 from IPython.core import shadowns
41 from IPython.core import ultratb
41 from IPython.core import ultratb
42 from IPython.core.alias import AliasManager, AliasError
42 from IPython.core.alias import AliasManager, AliasError
43 from IPython.core.autocall import ExitAutocall
43 from IPython.core.autocall import ExitAutocall
44 from IPython.core.builtin_trap import BuiltinTrap
44 from IPython.core.builtin_trap import BuiltinTrap
45 from IPython.core.compilerop import CachingCompiler
45 from IPython.core.compilerop import CachingCompiler
46 from IPython.core.display_trap import DisplayTrap
46 from IPython.core.display_trap import DisplayTrap
47 from IPython.core.displayhook import DisplayHook
47 from IPython.core.displayhook import DisplayHook
48 from IPython.core.displaypub import DisplayPublisher
48 from IPython.core.displaypub import DisplayPublisher
49 from IPython.core.error import UsageError
49 from IPython.core.error import UsageError
50 from IPython.core.extensions import ExtensionManager
50 from IPython.core.extensions import ExtensionManager
51 from IPython.core.fakemodule import FakeModule, init_fakemod_dict
51 from IPython.core.fakemodule import FakeModule, init_fakemod_dict
52 from IPython.core.formatters import DisplayFormatter
52 from IPython.core.formatters import DisplayFormatter
53 from IPython.core.history import HistoryManager
53 from IPython.core.history import HistoryManager
54 from IPython.core.inputsplitter import IPythonInputSplitter, ESC_MAGIC, ESC_MAGIC2
54 from IPython.core.inputsplitter import IPythonInputSplitter, ESC_MAGIC, ESC_MAGIC2
55 from IPython.core.logger import Logger
55 from IPython.core.logger import Logger
56 from IPython.core.macro import Macro
56 from IPython.core.macro import Macro
57 from IPython.core.payload import PayloadManager
57 from IPython.core.payload import PayloadManager
58 from IPython.core.prefilter import PrefilterManager
58 from IPython.core.prefilter import PrefilterManager
59 from IPython.core.profiledir import ProfileDir
59 from IPython.core.profiledir import ProfileDir
60 from IPython.core.pylabtools import pylab_activate
60 from IPython.core.pylabtools import pylab_activate
61 from IPython.core.prompts import PromptManager
61 from IPython.core.prompts import PromptManager
62 from IPython.lib.latextools import LaTeXTool
62 from IPython.lib.latextools import LaTeXTool
63 from IPython.utils import PyColorize
63 from IPython.utils import PyColorize
64 from IPython.utils import io
64 from IPython.utils import io
65 from IPython.utils import py3compat
65 from IPython.utils import py3compat
66 from IPython.utils import openpy
66 from IPython.utils import openpy
67 from IPython.utils.decorators import undoc
67 from IPython.utils.decorators import undoc
68 from IPython.utils.doctestreload import doctest_reload
68 from IPython.utils.doctestreload import doctest_reload
69 from IPython.utils.io import ask_yes_no
69 from IPython.utils.io import ask_yes_no
70 from IPython.utils.ipstruct import Struct
70 from IPython.utils.ipstruct import Struct
71 from IPython.utils.path import get_home_dir, get_ipython_dir, get_py_filename, unquote_filename
71 from IPython.utils.path import get_home_dir, get_ipython_dir, get_py_filename, unquote_filename
72 from IPython.utils.pickleshare import PickleShareDB
72 from IPython.utils.pickleshare import PickleShareDB
73 from IPython.utils.process import system, getoutput
73 from IPython.utils.process import system, getoutput
74 from IPython.utils.strdispatch import StrDispatch
74 from IPython.utils.strdispatch import StrDispatch
75 from IPython.utils.syspathcontext import prepended_to_syspath
75 from IPython.utils.syspathcontext import prepended_to_syspath
76 from IPython.utils.text import (format_screen, LSString, SList,
76 from IPython.utils.text import (format_screen, LSString, SList,
77 DollarFormatter)
77 DollarFormatter)
78 from IPython.utils.traitlets import (Integer, CBool, CaselessStrEnum, Enum,
78 from IPython.utils.traitlets import (Integer, CBool, CaselessStrEnum, Enum,
79 List, Unicode, Instance, Type)
79 List, Unicode, Instance, Type)
80 from IPython.utils.warn import warn, error
80 from IPython.utils.warn import warn, error
81 import IPython.core.hooks
81 import IPython.core.hooks
82
82
83 #-----------------------------------------------------------------------------
83 #-----------------------------------------------------------------------------
84 # Globals
84 # Globals
85 #-----------------------------------------------------------------------------
85 #-----------------------------------------------------------------------------
86
86
87 # compiled regexps for autoindent management
87 # compiled regexps for autoindent management
88 dedent_re = re.compile(r'^\s+raise|^\s+return|^\s+pass')
88 dedent_re = re.compile(r'^\s+raise|^\s+return|^\s+pass')
89
89
90 #-----------------------------------------------------------------------------
90 #-----------------------------------------------------------------------------
91 # Utilities
91 # Utilities
92 #-----------------------------------------------------------------------------
92 #-----------------------------------------------------------------------------
93
93
94 @undoc
94 @undoc
95 def softspace(file, newvalue):
95 def softspace(file, newvalue):
96 """Copied from code.py, to remove the dependency"""
96 """Copied from code.py, to remove the dependency"""
97
97
98 oldvalue = 0
98 oldvalue = 0
99 try:
99 try:
100 oldvalue = file.softspace
100 oldvalue = file.softspace
101 except AttributeError:
101 except AttributeError:
102 pass
102 pass
103 try:
103 try:
104 file.softspace = newvalue
104 file.softspace = newvalue
105 except (AttributeError, TypeError):
105 except (AttributeError, TypeError):
106 # "attribute-less object" or "read-only attributes"
106 # "attribute-less object" or "read-only attributes"
107 pass
107 pass
108 return oldvalue
108 return oldvalue
109
109
110 @undoc
110 @undoc
111 def no_op(*a, **kw): pass
111 def no_op(*a, **kw): pass
112
112
113 @undoc
113 @undoc
114 class NoOpContext(object):
114 class NoOpContext(object):
115 def __enter__(self): pass
115 def __enter__(self): pass
116 def __exit__(self, type, value, traceback): pass
116 def __exit__(self, type, value, traceback): pass
117 no_op_context = NoOpContext()
117 no_op_context = NoOpContext()
118
118
119 class SpaceInInput(Exception): pass
119 class SpaceInInput(Exception): pass
120
120
121 @undoc
121 @undoc
122 class Bunch: pass
122 class Bunch: pass
123
123
124
124
125 def get_default_colors():
125 def get_default_colors():
126 if sys.platform=='darwin':
126 if sys.platform=='darwin':
127 return "LightBG"
127 return "LightBG"
128 elif os.name=='nt':
128 elif os.name=='nt':
129 return 'Linux'
129 return 'Linux'
130 else:
130 else:
131 return 'Linux'
131 return 'Linux'
132
132
133
133
134 class SeparateUnicode(Unicode):
134 class SeparateUnicode(Unicode):
135 """A Unicode subclass to validate separate_in, separate_out, etc.
135 """A Unicode subclass to validate separate_in, separate_out, etc.
136
136
137 This is a Unicode based trait that converts '0'->'' and '\\n'->'\n'.
137 This is a Unicode based trait that converts '0'->'' and '\\n'->'\n'.
138 """
138 """
139
139
140 def validate(self, obj, value):
140 def validate(self, obj, value):
141 if value == '0': value = ''
141 if value == '0': value = ''
142 value = value.replace('\\n','\n')
142 value = value.replace('\\n','\n')
143 return super(SeparateUnicode, self).validate(obj, value)
143 return super(SeparateUnicode, self).validate(obj, value)
144
144
145
145
146 class ReadlineNoRecord(object):
146 class ReadlineNoRecord(object):
147 """Context manager to execute some code, then reload readline history
147 """Context manager to execute some code, then reload readline history
148 so that interactive input to the code doesn't appear when pressing up."""
148 so that interactive input to the code doesn't appear when pressing up."""
149 def __init__(self, shell):
149 def __init__(self, shell):
150 self.shell = shell
150 self.shell = shell
151 self._nested_level = 0
151 self._nested_level = 0
152
152
153 def __enter__(self):
153 def __enter__(self):
154 if self._nested_level == 0:
154 if self._nested_level == 0:
155 try:
155 try:
156 self.orig_length = self.current_length()
156 self.orig_length = self.current_length()
157 self.readline_tail = self.get_readline_tail()
157 self.readline_tail = self.get_readline_tail()
158 except (AttributeError, IndexError): # Can fail with pyreadline
158 except (AttributeError, IndexError): # Can fail with pyreadline
159 self.orig_length, self.readline_tail = 999999, []
159 self.orig_length, self.readline_tail = 999999, []
160 self._nested_level += 1
160 self._nested_level += 1
161
161
162 def __exit__(self, type, value, traceback):
162 def __exit__(self, type, value, traceback):
163 self._nested_level -= 1
163 self._nested_level -= 1
164 if self._nested_level == 0:
164 if self._nested_level == 0:
165 # Try clipping the end if it's got longer
165 # Try clipping the end if it's got longer
166 try:
166 try:
167 e = self.current_length() - self.orig_length
167 e = self.current_length() - self.orig_length
168 if e > 0:
168 if e > 0:
169 for _ in range(e):
169 for _ in range(e):
170 self.shell.readline.remove_history_item(self.orig_length)
170 self.shell.readline.remove_history_item(self.orig_length)
171
171
172 # If it still doesn't match, just reload readline history.
172 # If it still doesn't match, just reload readline history.
173 if self.current_length() != self.orig_length \
173 if self.current_length() != self.orig_length \
174 or self.get_readline_tail() != self.readline_tail:
174 or self.get_readline_tail() != self.readline_tail:
175 self.shell.refill_readline_hist()
175 self.shell.refill_readline_hist()
176 except (AttributeError, IndexError):
176 except (AttributeError, IndexError):
177 pass
177 pass
178 # Returning False will cause exceptions to propagate
178 # Returning False will cause exceptions to propagate
179 return False
179 return False
180
180
181 def current_length(self):
181 def current_length(self):
182 return self.shell.readline.get_current_history_length()
182 return self.shell.readline.get_current_history_length()
183
183
184 def get_readline_tail(self, n=10):
184 def get_readline_tail(self, n=10):
185 """Get the last n items in readline history."""
185 """Get the last n items in readline history."""
186 end = self.shell.readline.get_current_history_length() + 1
186 end = self.shell.readline.get_current_history_length() + 1
187 start = max(end-n, 1)
187 start = max(end-n, 1)
188 ghi = self.shell.readline.get_history_item
188 ghi = self.shell.readline.get_history_item
189 return [ghi(x) for x in range(start, end)]
189 return [ghi(x) for x in range(start, end)]
190
190
191 #-----------------------------------------------------------------------------
191 #-----------------------------------------------------------------------------
192 # Main IPython class
192 # Main IPython class
193 #-----------------------------------------------------------------------------
193 #-----------------------------------------------------------------------------
194
194
195 class InteractiveShell(SingletonConfigurable):
195 class InteractiveShell(SingletonConfigurable):
196 """An enhanced, interactive shell for Python."""
196 """An enhanced, interactive shell for Python."""
197
197
198 _instance = None
198 _instance = None
199
199
200 ast_transformers = List([], config=True, help=
200 ast_transformers = List([], config=True, help=
201 """
201 """
202 A list of ast.NodeTransformer subclass instances, which will be applied
202 A list of ast.NodeTransformer subclass instances, which will be applied
203 to user input before code is run.
203 to user input before code is run.
204 """
204 """
205 )
205 )
206
206
207 autocall = Enum((0,1,2), default_value=0, config=True, help=
207 autocall = Enum((0,1,2), default_value=0, config=True, help=
208 """
208 """
209 Make IPython automatically call any callable object even if you didn't
209 Make IPython automatically call any callable object even if you didn't
210 type explicit parentheses. For example, 'str 43' becomes 'str(43)'
210 type explicit parentheses. For example, 'str 43' becomes 'str(43)'
211 automatically. The value can be '0' to disable the feature, '1' for
211 automatically. The value can be '0' to disable the feature, '1' for
212 'smart' autocall, where it is not applied if there are no more
212 'smart' autocall, where it is not applied if there are no more
213 arguments on the line, and '2' for 'full' autocall, where all callable
213 arguments on the line, and '2' for 'full' autocall, where all callable
214 objects are automatically called (even if no arguments are present).
214 objects are automatically called (even if no arguments are present).
215 """
215 """
216 )
216 )
217 # TODO: remove all autoindent logic and put into frontends.
217 # TODO: remove all autoindent logic and put into frontends.
218 # We can't do this yet because even runlines uses the autoindent.
218 # We can't do this yet because even runlines uses the autoindent.
219 autoindent = CBool(True, config=True, help=
219 autoindent = CBool(True, config=True, help=
220 """
220 """
221 Autoindent IPython code entered interactively.
221 Autoindent IPython code entered interactively.
222 """
222 """
223 )
223 )
224 automagic = CBool(True, config=True, help=
224 automagic = CBool(True, config=True, help=
225 """
225 """
226 Enable magic commands to be called without the leading %.
226 Enable magic commands to be called without the leading %.
227 """
227 """
228 )
228 )
229 cache_size = Integer(1000, config=True, help=
229 cache_size = Integer(1000, config=True, help=
230 """
230 """
231 Set the size of the output cache. The default is 1000, you can
231 Set the size of the output cache. The default is 1000, you can
232 change it permanently in your config file. Setting it to 0 completely
232 change it permanently in your config file. Setting it to 0 completely
233 disables the caching system, and the minimum value accepted is 20 (if
233 disables the caching system, and the minimum value accepted is 20 (if
234 you provide a value less than 20, it is reset to 0 and a warning is
234 you provide a value less than 20, it is reset to 0 and a warning is
235 issued). This limit is defined because otherwise you'll spend more
235 issued). This limit is defined because otherwise you'll spend more
236 time re-flushing a too small cache than working
236 time re-flushing a too small cache than working
237 """
237 """
238 )
238 )
239 color_info = CBool(True, config=True, help=
239 color_info = CBool(True, config=True, help=
240 """
240 """
241 Use colors for displaying information about objects. Because this
241 Use colors for displaying information about objects. Because this
242 information is passed through a pager (like 'less'), and some pagers
242 information is passed through a pager (like 'less'), and some pagers
243 get confused with color codes, this capability can be turned off.
243 get confused with color codes, this capability can be turned off.
244 """
244 """
245 )
245 )
246 colors = CaselessStrEnum(('NoColor','LightBG','Linux'),
246 colors = CaselessStrEnum(('NoColor','LightBG','Linux'),
247 default_value=get_default_colors(), config=True,
247 default_value=get_default_colors(), config=True,
248 help="Set the color scheme (NoColor, Linux, or LightBG)."
248 help="Set the color scheme (NoColor, Linux, or LightBG)."
249 )
249 )
250 colors_force = CBool(False, help=
250 colors_force = CBool(False, help=
251 """
251 """
252 Force use of ANSI color codes, regardless of OS and readline
252 Force use of ANSI color codes, regardless of OS and readline
253 availability.
253 availability.
254 """
254 """
255 # FIXME: This is essentially a hack to allow ZMQShell to show colors
255 # FIXME: This is essentially a hack to allow ZMQShell to show colors
256 # without readline on Win32. When the ZMQ formatting system is
256 # without readline on Win32. When the ZMQ formatting system is
257 # refactored, this should be removed.
257 # refactored, this should be removed.
258 )
258 )
259 debug = CBool(False, config=True)
259 debug = CBool(False, config=True)
260 deep_reload = CBool(False, config=True, help=
260 deep_reload = CBool(False, config=True, help=
261 """
261 """
262 Enable deep (recursive) reloading by default. IPython can use the
262 Enable deep (recursive) reloading by default. IPython can use the
263 deep_reload module which reloads changes in modules recursively (it
263 deep_reload module which reloads changes in modules recursively (it
264 replaces the reload() function, so you don't need to change anything to
264 replaces the reload() function, so you don't need to change anything to
265 use it). deep_reload() forces a full reload of modules whose code may
265 use it). deep_reload() forces a full reload of modules whose code may
266 have changed, which the default reload() function does not. When
266 have changed, which the default reload() function does not. When
267 deep_reload is off, IPython will use the normal reload(), but
267 deep_reload is off, IPython will use the normal reload(), but
268 deep_reload will still be available as dreload().
268 deep_reload will still be available as dreload().
269 """
269 """
270 )
270 )
271 disable_failing_post_execute = CBool(False, config=True,
271 disable_failing_post_execute = CBool(False, config=True,
272 help="Don't call post-execute functions that have failed in the past."
272 help="Don't call post-execute functions that have failed in the past."
273 )
273 )
274 display_formatter = Instance(DisplayFormatter)
274 display_formatter = Instance(DisplayFormatter)
275 displayhook_class = Type(DisplayHook)
275 displayhook_class = Type(DisplayHook)
276 display_pub_class = Type(DisplayPublisher)
276 display_pub_class = Type(DisplayPublisher)
277 data_pub_class = None
277 data_pub_class = None
278
278
279 exit_now = CBool(False)
279 exit_now = CBool(False)
280 exiter = Instance(ExitAutocall)
280 exiter = Instance(ExitAutocall)
281 def _exiter_default(self):
281 def _exiter_default(self):
282 return ExitAutocall(self)
282 return ExitAutocall(self)
283 # Monotonically increasing execution counter
283 # Monotonically increasing execution counter
284 execution_count = Integer(1)
284 execution_count = Integer(1)
285 filename = Unicode("<ipython console>")
285 filename = Unicode("<ipython console>")
286 ipython_dir= Unicode('', config=True) # Set to get_ipython_dir() in __init__
286 ipython_dir= Unicode('', config=True) # Set to get_ipython_dir() in __init__
287
287
288 # Input splitter, to split entire cells of input into either individual
288 # Input splitter, to split entire cells of input into either individual
289 # interactive statements or whole blocks.
289 # interactive statements or whole blocks.
290 input_splitter = Instance('IPython.core.inputsplitter.IPythonInputSplitter',
290 input_splitter = Instance('IPython.core.inputsplitter.IPythonInputSplitter',
291 (), {})
291 (), {})
292 logstart = CBool(False, config=True, help=
292 logstart = CBool(False, config=True, help=
293 """
293 """
294 Start logging to the default log file.
294 Start logging to the default log file.
295 """
295 """
296 )
296 )
297 logfile = Unicode('', config=True, help=
297 logfile = Unicode('', config=True, help=
298 """
298 """
299 The name of the logfile to use.
299 The name of the logfile to use.
300 """
300 """
301 )
301 )
302 logappend = Unicode('', config=True, help=
302 logappend = Unicode('', config=True, help=
303 """
303 """
304 Start logging to the given file in append mode.
304 Start logging to the given file in append mode.
305 """
305 """
306 )
306 )
307 object_info_string_level = Enum((0,1,2), default_value=0,
307 object_info_string_level = Enum((0,1,2), default_value=0,
308 config=True)
308 config=True)
309 pdb = CBool(False, config=True, help=
309 pdb = CBool(False, config=True, help=
310 """
310 """
311 Automatically call the pdb debugger after every exception.
311 Automatically call the pdb debugger after every exception.
312 """
312 """
313 )
313 )
314 multiline_history = CBool(sys.platform != 'win32', config=True,
314 multiline_history = CBool(sys.platform != 'win32', config=True,
315 help="Save multi-line entries as one entry in readline history"
315 help="Save multi-line entries as one entry in readline history"
316 )
316 )
317
317
318 # deprecated prompt traits:
318 # deprecated prompt traits:
319
319
320 prompt_in1 = Unicode('In [\\#]: ', config=True,
320 prompt_in1 = Unicode('In [\\#]: ', config=True,
321 help="Deprecated, use PromptManager.in_template")
321 help="Deprecated, use PromptManager.in_template")
322 prompt_in2 = Unicode(' .\\D.: ', config=True,
322 prompt_in2 = Unicode(' .\\D.: ', config=True,
323 help="Deprecated, use PromptManager.in2_template")
323 help="Deprecated, use PromptManager.in2_template")
324 prompt_out = Unicode('Out[\\#]: ', config=True,
324 prompt_out = Unicode('Out[\\#]: ', config=True,
325 help="Deprecated, use PromptManager.out_template")
325 help="Deprecated, use PromptManager.out_template")
326 prompts_pad_left = CBool(True, config=True,
326 prompts_pad_left = CBool(True, config=True,
327 help="Deprecated, use PromptManager.justify")
327 help="Deprecated, use PromptManager.justify")
328
328
329 def _prompt_trait_changed(self, name, old, new):
329 def _prompt_trait_changed(self, name, old, new):
330 table = {
330 table = {
331 'prompt_in1' : 'in_template',
331 'prompt_in1' : 'in_template',
332 'prompt_in2' : 'in2_template',
332 'prompt_in2' : 'in2_template',
333 'prompt_out' : 'out_template',
333 'prompt_out' : 'out_template',
334 'prompts_pad_left' : 'justify',
334 'prompts_pad_left' : 'justify',
335 }
335 }
336 warn("InteractiveShell.{name} is deprecated, use PromptManager.{newname}".format(
336 warn("InteractiveShell.{name} is deprecated, use PromptManager.{newname}".format(
337 name=name, newname=table[name])
337 name=name, newname=table[name])
338 )
338 )
339 # protect against weird cases where self.config may not exist:
339 # protect against weird cases where self.config may not exist:
340 if self.config is not None:
340 if self.config is not None:
341 # propagate to corresponding PromptManager trait
341 # propagate to corresponding PromptManager trait
342 setattr(self.config.PromptManager, table[name], new)
342 setattr(self.config.PromptManager, table[name], new)
343
343
344 _prompt_in1_changed = _prompt_trait_changed
344 _prompt_in1_changed = _prompt_trait_changed
345 _prompt_in2_changed = _prompt_trait_changed
345 _prompt_in2_changed = _prompt_trait_changed
346 _prompt_out_changed = _prompt_trait_changed
346 _prompt_out_changed = _prompt_trait_changed
347 _prompt_pad_left_changed = _prompt_trait_changed
347 _prompt_pad_left_changed = _prompt_trait_changed
348
348
349 show_rewritten_input = CBool(True, config=True,
349 show_rewritten_input = CBool(True, config=True,
350 help="Show rewritten input, e.g. for autocall."
350 help="Show rewritten input, e.g. for autocall."
351 )
351 )
352
352
353 quiet = CBool(False, config=True)
353 quiet = CBool(False, config=True)
354
354
355 history_length = Integer(10000, config=True)
355 history_length = Integer(10000, config=True)
356
356
357 # The readline stuff will eventually be moved to the terminal subclass
357 # The readline stuff will eventually be moved to the terminal subclass
358 # but for now, we can't do that as readline is welded in everywhere.
358 # but for now, we can't do that as readline is welded in everywhere.
359 readline_use = CBool(True, config=True)
359 readline_use = CBool(True, config=True)
360 readline_remove_delims = Unicode('-/~', config=True)
360 readline_remove_delims = Unicode('-/~', config=True)
361 readline_delims = Unicode() # set by init_readline()
361 # don't use \M- bindings by default, because they
362 # don't use \M- bindings by default, because they
362 # conflict with 8-bit encodings. See gh-58,gh-88
363 # conflict with 8-bit encodings. See gh-58,gh-88
363 readline_parse_and_bind = List([
364 readline_parse_and_bind = List([
364 'tab: complete',
365 'tab: complete',
365 '"\C-l": clear-screen',
366 '"\C-l": clear-screen',
366 'set show-all-if-ambiguous on',
367 'set show-all-if-ambiguous on',
367 '"\C-o": tab-insert',
368 '"\C-o": tab-insert',
368 '"\C-r": reverse-search-history',
369 '"\C-r": reverse-search-history',
369 '"\C-s": forward-search-history',
370 '"\C-s": forward-search-history',
370 '"\C-p": history-search-backward',
371 '"\C-p": history-search-backward',
371 '"\C-n": history-search-forward',
372 '"\C-n": history-search-forward',
372 '"\e[A": history-search-backward',
373 '"\e[A": history-search-backward',
373 '"\e[B": history-search-forward',
374 '"\e[B": history-search-forward',
374 '"\C-k": kill-line',
375 '"\C-k": kill-line',
375 '"\C-u": unix-line-discard',
376 '"\C-u": unix-line-discard',
376 ], allow_none=False, config=True)
377 ], allow_none=False, config=True)
377
378
378 ast_node_interactivity = Enum(['all', 'last', 'last_expr', 'none'],
379 ast_node_interactivity = Enum(['all', 'last', 'last_expr', 'none'],
379 default_value='last_expr', config=True,
380 default_value='last_expr', config=True,
380 help="""
381 help="""
381 'all', 'last', 'last_expr' or 'none', specifying which nodes should be
382 'all', 'last', 'last_expr' or 'none', specifying which nodes should be
382 run interactively (displaying output from expressions).""")
383 run interactively (displaying output from expressions).""")
383
384
384 # TODO: this part of prompt management should be moved to the frontends.
385 # TODO: this part of prompt management should be moved to the frontends.
385 # Use custom TraitTypes that convert '0'->'' and '\\n'->'\n'
386 # Use custom TraitTypes that convert '0'->'' and '\\n'->'\n'
386 separate_in = SeparateUnicode('\n', config=True)
387 separate_in = SeparateUnicode('\n', config=True)
387 separate_out = SeparateUnicode('', config=True)
388 separate_out = SeparateUnicode('', config=True)
388 separate_out2 = SeparateUnicode('', config=True)
389 separate_out2 = SeparateUnicode('', config=True)
389 wildcards_case_sensitive = CBool(True, config=True)
390 wildcards_case_sensitive = CBool(True, config=True)
390 xmode = CaselessStrEnum(('Context','Plain', 'Verbose'),
391 xmode = CaselessStrEnum(('Context','Plain', 'Verbose'),
391 default_value='Context', config=True)
392 default_value='Context', config=True)
392
393
393 # Subcomponents of InteractiveShell
394 # Subcomponents of InteractiveShell
394 alias_manager = Instance('IPython.core.alias.AliasManager')
395 alias_manager = Instance('IPython.core.alias.AliasManager')
395 prefilter_manager = Instance('IPython.core.prefilter.PrefilterManager')
396 prefilter_manager = Instance('IPython.core.prefilter.PrefilterManager')
396 builtin_trap = Instance('IPython.core.builtin_trap.BuiltinTrap')
397 builtin_trap = Instance('IPython.core.builtin_trap.BuiltinTrap')
397 display_trap = Instance('IPython.core.display_trap.DisplayTrap')
398 display_trap = Instance('IPython.core.display_trap.DisplayTrap')
398 extension_manager = Instance('IPython.core.extensions.ExtensionManager')
399 extension_manager = Instance('IPython.core.extensions.ExtensionManager')
399 payload_manager = Instance('IPython.core.payload.PayloadManager')
400 payload_manager = Instance('IPython.core.payload.PayloadManager')
400 history_manager = Instance('IPython.core.history.HistoryManager')
401 history_manager = Instance('IPython.core.history.HistoryManager')
401 magics_manager = Instance('IPython.core.magic.MagicsManager')
402 magics_manager = Instance('IPython.core.magic.MagicsManager')
402
403
403 profile_dir = Instance('IPython.core.application.ProfileDir')
404 profile_dir = Instance('IPython.core.application.ProfileDir')
404 @property
405 @property
405 def profile(self):
406 def profile(self):
406 if self.profile_dir is not None:
407 if self.profile_dir is not None:
407 name = os.path.basename(self.profile_dir.location)
408 name = os.path.basename(self.profile_dir.location)
408 return name.replace('profile_','')
409 return name.replace('profile_','')
409
410
410
411
411 # Private interface
412 # Private interface
412 _post_execute = Instance(dict)
413 _post_execute = Instance(dict)
413
414
414 # Tracks any GUI loop loaded for pylab
415 # Tracks any GUI loop loaded for pylab
415 pylab_gui_select = None
416 pylab_gui_select = None
416
417
417 def __init__(self, config=None, ipython_dir=None, profile_dir=None,
418 def __init__(self, config=None, ipython_dir=None, profile_dir=None,
418 user_module=None, user_ns=None,
419 user_module=None, user_ns=None,
419 custom_exceptions=((), None)):
420 custom_exceptions=((), None)):
420
421
421 # This is where traits with a config_key argument are updated
422 # This is where traits with a config_key argument are updated
422 # from the values on config.
423 # from the values on config.
423 super(InteractiveShell, self).__init__(config=config)
424 super(InteractiveShell, self).__init__(config=config)
424 self.configurables = [self]
425 self.configurables = [self]
425
426
426 # These are relatively independent and stateless
427 # These are relatively independent and stateless
427 self.init_ipython_dir(ipython_dir)
428 self.init_ipython_dir(ipython_dir)
428 self.init_profile_dir(profile_dir)
429 self.init_profile_dir(profile_dir)
429 self.init_instance_attrs()
430 self.init_instance_attrs()
430 self.init_environment()
431 self.init_environment()
431
432
432 # Check if we're in a virtualenv, and set up sys.path.
433 # Check if we're in a virtualenv, and set up sys.path.
433 self.init_virtualenv()
434 self.init_virtualenv()
434
435
435 # Create namespaces (user_ns, user_global_ns, etc.)
436 # Create namespaces (user_ns, user_global_ns, etc.)
436 self.init_create_namespaces(user_module, user_ns)
437 self.init_create_namespaces(user_module, user_ns)
437 # This has to be done after init_create_namespaces because it uses
438 # This has to be done after init_create_namespaces because it uses
438 # something in self.user_ns, but before init_sys_modules, which
439 # something in self.user_ns, but before init_sys_modules, which
439 # is the first thing to modify sys.
440 # is the first thing to modify sys.
440 # TODO: When we override sys.stdout and sys.stderr before this class
441 # TODO: When we override sys.stdout and sys.stderr before this class
441 # is created, we are saving the overridden ones here. Not sure if this
442 # is created, we are saving the overridden ones here. Not sure if this
442 # is what we want to do.
443 # is what we want to do.
443 self.save_sys_module_state()
444 self.save_sys_module_state()
444 self.init_sys_modules()
445 self.init_sys_modules()
445
446
446 # While we're trying to have each part of the code directly access what
447 # While we're trying to have each part of the code directly access what
447 # it needs without keeping redundant references to objects, we have too
448 # it needs without keeping redundant references to objects, we have too
448 # much legacy code that expects ip.db to exist.
449 # much legacy code that expects ip.db to exist.
449 self.db = PickleShareDB(os.path.join(self.profile_dir.location, 'db'))
450 self.db = PickleShareDB(os.path.join(self.profile_dir.location, 'db'))
450
451
451 self.init_history()
452 self.init_history()
452 self.init_encoding()
453 self.init_encoding()
453 self.init_prefilter()
454 self.init_prefilter()
454
455
455 self.init_syntax_highlighting()
456 self.init_syntax_highlighting()
456 self.init_hooks()
457 self.init_hooks()
457 self.init_pushd_popd_magic()
458 self.init_pushd_popd_magic()
458 # self.init_traceback_handlers use to be here, but we moved it below
459 # self.init_traceback_handlers use to be here, but we moved it below
459 # because it and init_io have to come after init_readline.
460 # because it and init_io have to come after init_readline.
460 self.init_user_ns()
461 self.init_user_ns()
461 self.init_logger()
462 self.init_logger()
462 self.init_alias()
463 self.init_alias()
463 self.init_builtins()
464 self.init_builtins()
464
465
465 # The following was in post_config_initialization
466 # The following was in post_config_initialization
466 self.init_inspector()
467 self.init_inspector()
467 # init_readline() must come before init_io(), because init_io uses
468 # init_readline() must come before init_io(), because init_io uses
468 # readline related things.
469 # readline related things.
469 self.init_readline()
470 self.init_readline()
470 # We save this here in case user code replaces raw_input, but it needs
471 # We save this here in case user code replaces raw_input, but it needs
471 # to be after init_readline(), because PyPy's readline works by replacing
472 # to be after init_readline(), because PyPy's readline works by replacing
472 # raw_input.
473 # raw_input.
473 if py3compat.PY3:
474 if py3compat.PY3:
474 self.raw_input_original = input
475 self.raw_input_original = input
475 else:
476 else:
476 self.raw_input_original = raw_input
477 self.raw_input_original = raw_input
477 # init_completer must come after init_readline, because it needs to
478 # init_completer must come after init_readline, because it needs to
478 # know whether readline is present or not system-wide to configure the
479 # know whether readline is present or not system-wide to configure the
479 # completers, since the completion machinery can now operate
480 # completers, since the completion machinery can now operate
480 # independently of readline (e.g. over the network)
481 # independently of readline (e.g. over the network)
481 self.init_completer()
482 self.init_completer()
482 # TODO: init_io() needs to happen before init_traceback handlers
483 # TODO: init_io() needs to happen before init_traceback handlers
483 # because the traceback handlers hardcode the stdout/stderr streams.
484 # because the traceback handlers hardcode the stdout/stderr streams.
484 # This logic in in debugger.Pdb and should eventually be changed.
485 # This logic in in debugger.Pdb and should eventually be changed.
485 self.init_io()
486 self.init_io()
486 self.init_traceback_handlers(custom_exceptions)
487 self.init_traceback_handlers(custom_exceptions)
487 self.init_prompts()
488 self.init_prompts()
488 self.init_display_formatter()
489 self.init_display_formatter()
489 self.init_display_pub()
490 self.init_display_pub()
490 self.init_data_pub()
491 self.init_data_pub()
491 self.init_displayhook()
492 self.init_displayhook()
492 self.init_reload_doctest()
493 self.init_reload_doctest()
493 self.init_latextool()
494 self.init_latextool()
494 self.init_magics()
495 self.init_magics()
495 self.init_logstart()
496 self.init_logstart()
496 self.init_pdb()
497 self.init_pdb()
497 self.init_extension_manager()
498 self.init_extension_manager()
498 self.init_payload()
499 self.init_payload()
499 self.hooks.late_startup_hook()
500 self.hooks.late_startup_hook()
500 atexit.register(self.atexit_operations)
501 atexit.register(self.atexit_operations)
501
502
502 def get_ipython(self):
503 def get_ipython(self):
503 """Return the currently running IPython instance."""
504 """Return the currently running IPython instance."""
504 return self
505 return self
505
506
506 #-------------------------------------------------------------------------
507 #-------------------------------------------------------------------------
507 # Trait changed handlers
508 # Trait changed handlers
508 #-------------------------------------------------------------------------
509 #-------------------------------------------------------------------------
509
510
510 def _ipython_dir_changed(self, name, new):
511 def _ipython_dir_changed(self, name, new):
511 if not os.path.isdir(new):
512 if not os.path.isdir(new):
512 os.makedirs(new, mode = 0o777)
513 os.makedirs(new, mode = 0o777)
513
514
514 def set_autoindent(self,value=None):
515 def set_autoindent(self,value=None):
515 """Set the autoindent flag, checking for readline support.
516 """Set the autoindent flag, checking for readline support.
516
517
517 If called with no arguments, it acts as a toggle."""
518 If called with no arguments, it acts as a toggle."""
518
519
519 if value != 0 and not self.has_readline:
520 if value != 0 and not self.has_readline:
520 if os.name == 'posix':
521 if os.name == 'posix':
521 warn("The auto-indent feature requires the readline library")
522 warn("The auto-indent feature requires the readline library")
522 self.autoindent = 0
523 self.autoindent = 0
523 return
524 return
524 if value is None:
525 if value is None:
525 self.autoindent = not self.autoindent
526 self.autoindent = not self.autoindent
526 else:
527 else:
527 self.autoindent = value
528 self.autoindent = value
528
529
529 #-------------------------------------------------------------------------
530 #-------------------------------------------------------------------------
530 # init_* methods called by __init__
531 # init_* methods called by __init__
531 #-------------------------------------------------------------------------
532 #-------------------------------------------------------------------------
532
533
533 def init_ipython_dir(self, ipython_dir):
534 def init_ipython_dir(self, ipython_dir):
534 if ipython_dir is not None:
535 if ipython_dir is not None:
535 self.ipython_dir = ipython_dir
536 self.ipython_dir = ipython_dir
536 return
537 return
537
538
538 self.ipython_dir = get_ipython_dir()
539 self.ipython_dir = get_ipython_dir()
539
540
540 def init_profile_dir(self, profile_dir):
541 def init_profile_dir(self, profile_dir):
541 if profile_dir is not None:
542 if profile_dir is not None:
542 self.profile_dir = profile_dir
543 self.profile_dir = profile_dir
543 return
544 return
544 self.profile_dir =\
545 self.profile_dir =\
545 ProfileDir.create_profile_dir_by_name(self.ipython_dir, 'default')
546 ProfileDir.create_profile_dir_by_name(self.ipython_dir, 'default')
546
547
547 def init_instance_attrs(self):
548 def init_instance_attrs(self):
548 self.more = False
549 self.more = False
549
550
550 # command compiler
551 # command compiler
551 self.compile = CachingCompiler()
552 self.compile = CachingCompiler()
552
553
553 # Make an empty namespace, which extension writers can rely on both
554 # Make an empty namespace, which extension writers can rely on both
554 # existing and NEVER being used by ipython itself. This gives them a
555 # existing and NEVER being used by ipython itself. This gives them a
555 # convenient location for storing additional information and state
556 # convenient location for storing additional information and state
556 # their extensions may require, without fear of collisions with other
557 # their extensions may require, without fear of collisions with other
557 # ipython names that may develop later.
558 # ipython names that may develop later.
558 self.meta = Struct()
559 self.meta = Struct()
559
560
560 # Temporary files used for various purposes. Deleted at exit.
561 # Temporary files used for various purposes. Deleted at exit.
561 self.tempfiles = []
562 self.tempfiles = []
562
563
563 # Keep track of readline usage (later set by init_readline)
564 # Keep track of readline usage (later set by init_readline)
564 self.has_readline = False
565 self.has_readline = False
565
566
566 # keep track of where we started running (mainly for crash post-mortem)
567 # keep track of where we started running (mainly for crash post-mortem)
567 # This is not being used anywhere currently.
568 # This is not being used anywhere currently.
568 self.starting_dir = os.getcwdu()
569 self.starting_dir = os.getcwdu()
569
570
570 # Indentation management
571 # Indentation management
571 self.indent_current_nsp = 0
572 self.indent_current_nsp = 0
572
573
573 # Dict to track post-execution functions that have been registered
574 # Dict to track post-execution functions that have been registered
574 self._post_execute = {}
575 self._post_execute = {}
575
576
576 def init_environment(self):
577 def init_environment(self):
577 """Any changes we need to make to the user's environment."""
578 """Any changes we need to make to the user's environment."""
578 pass
579 pass
579
580
580 def init_encoding(self):
581 def init_encoding(self):
581 # Get system encoding at startup time. Certain terminals (like Emacs
582 # Get system encoding at startup time. Certain terminals (like Emacs
582 # under Win32 have it set to None, and we need to have a known valid
583 # under Win32 have it set to None, and we need to have a known valid
583 # encoding to use in the raw_input() method
584 # encoding to use in the raw_input() method
584 try:
585 try:
585 self.stdin_encoding = sys.stdin.encoding or 'ascii'
586 self.stdin_encoding = sys.stdin.encoding or 'ascii'
586 except AttributeError:
587 except AttributeError:
587 self.stdin_encoding = 'ascii'
588 self.stdin_encoding = 'ascii'
588
589
589 def init_syntax_highlighting(self):
590 def init_syntax_highlighting(self):
590 # Python source parser/formatter for syntax highlighting
591 # Python source parser/formatter for syntax highlighting
591 pyformat = PyColorize.Parser().format
592 pyformat = PyColorize.Parser().format
592 self.pycolorize = lambda src: pyformat(src,'str',self.colors)
593 self.pycolorize = lambda src: pyformat(src,'str',self.colors)
593
594
594 def init_pushd_popd_magic(self):
595 def init_pushd_popd_magic(self):
595 # for pushd/popd management
596 # for pushd/popd management
596 self.home_dir = get_home_dir()
597 self.home_dir = get_home_dir()
597
598
598 self.dir_stack = []
599 self.dir_stack = []
599
600
600 def init_logger(self):
601 def init_logger(self):
601 self.logger = Logger(self.home_dir, logfname='ipython_log.py',
602 self.logger = Logger(self.home_dir, logfname='ipython_log.py',
602 logmode='rotate')
603 logmode='rotate')
603
604
604 def init_logstart(self):
605 def init_logstart(self):
605 """Initialize logging in case it was requested at the command line.
606 """Initialize logging in case it was requested at the command line.
606 """
607 """
607 if self.logappend:
608 if self.logappend:
608 self.magic('logstart %s append' % self.logappend)
609 self.magic('logstart %s append' % self.logappend)
609 elif self.logfile:
610 elif self.logfile:
610 self.magic('logstart %s' % self.logfile)
611 self.magic('logstart %s' % self.logfile)
611 elif self.logstart:
612 elif self.logstart:
612 self.magic('logstart')
613 self.magic('logstart')
613
614
614 def init_builtins(self):
615 def init_builtins(self):
615 # A single, static flag that we set to True. Its presence indicates
616 # A single, static flag that we set to True. Its presence indicates
616 # that an IPython shell has been created, and we make no attempts at
617 # that an IPython shell has been created, and we make no attempts at
617 # removing on exit or representing the existence of more than one
618 # removing on exit or representing the existence of more than one
618 # IPython at a time.
619 # IPython at a time.
619 builtin_mod.__dict__['__IPYTHON__'] = True
620 builtin_mod.__dict__['__IPYTHON__'] = True
620
621
621 # In 0.11 we introduced '__IPYTHON__active' as an integer we'd try to
622 # In 0.11 we introduced '__IPYTHON__active' as an integer we'd try to
622 # manage on enter/exit, but with all our shells it's virtually
623 # manage on enter/exit, but with all our shells it's virtually
623 # impossible to get all the cases right. We're leaving the name in for
624 # impossible to get all the cases right. We're leaving the name in for
624 # those who adapted their codes to check for this flag, but will
625 # those who adapted their codes to check for this flag, but will
625 # eventually remove it after a few more releases.
626 # eventually remove it after a few more releases.
626 builtin_mod.__dict__['__IPYTHON__active'] = \
627 builtin_mod.__dict__['__IPYTHON__active'] = \
627 'Deprecated, check for __IPYTHON__'
628 'Deprecated, check for __IPYTHON__'
628
629
629 self.builtin_trap = BuiltinTrap(shell=self)
630 self.builtin_trap = BuiltinTrap(shell=self)
630
631
631 def init_inspector(self):
632 def init_inspector(self):
632 # Object inspector
633 # Object inspector
633 self.inspector = oinspect.Inspector(oinspect.InspectColors,
634 self.inspector = oinspect.Inspector(oinspect.InspectColors,
634 PyColorize.ANSICodeColors,
635 PyColorize.ANSICodeColors,
635 'NoColor',
636 'NoColor',
636 self.object_info_string_level)
637 self.object_info_string_level)
637
638
638 def init_io(self):
639 def init_io(self):
639 # This will just use sys.stdout and sys.stderr. If you want to
640 # This will just use sys.stdout and sys.stderr. If you want to
640 # override sys.stdout and sys.stderr themselves, you need to do that
641 # override sys.stdout and sys.stderr themselves, you need to do that
641 # *before* instantiating this class, because io holds onto
642 # *before* instantiating this class, because io holds onto
642 # references to the underlying streams.
643 # references to the underlying streams.
643 if (sys.platform == 'win32' or sys.platform == 'cli') and self.has_readline:
644 if (sys.platform == 'win32' or sys.platform == 'cli') and self.has_readline:
644 io.stdout = io.stderr = io.IOStream(self.readline._outputfile)
645 io.stdout = io.stderr = io.IOStream(self.readline._outputfile)
645 else:
646 else:
646 io.stdout = io.IOStream(sys.stdout)
647 io.stdout = io.IOStream(sys.stdout)
647 io.stderr = io.IOStream(sys.stderr)
648 io.stderr = io.IOStream(sys.stderr)
648
649
649 def init_prompts(self):
650 def init_prompts(self):
650 self.prompt_manager = PromptManager(shell=self, config=self.config)
651 self.prompt_manager = PromptManager(shell=self, config=self.config)
651 self.configurables.append(self.prompt_manager)
652 self.configurables.append(self.prompt_manager)
652 # Set system prompts, so that scripts can decide if they are running
653 # Set system prompts, so that scripts can decide if they are running
653 # interactively.
654 # interactively.
654 sys.ps1 = 'In : '
655 sys.ps1 = 'In : '
655 sys.ps2 = '...: '
656 sys.ps2 = '...: '
656 sys.ps3 = 'Out: '
657 sys.ps3 = 'Out: '
657
658
658 def init_display_formatter(self):
659 def init_display_formatter(self):
659 self.display_formatter = DisplayFormatter(config=self.config)
660 self.display_formatter = DisplayFormatter(config=self.config)
660 self.configurables.append(self.display_formatter)
661 self.configurables.append(self.display_formatter)
661
662
662 def init_display_pub(self):
663 def init_display_pub(self):
663 self.display_pub = self.display_pub_class(config=self.config)
664 self.display_pub = self.display_pub_class(config=self.config)
664 self.configurables.append(self.display_pub)
665 self.configurables.append(self.display_pub)
665
666
666 def init_data_pub(self):
667 def init_data_pub(self):
667 if not self.data_pub_class:
668 if not self.data_pub_class:
668 self.data_pub = None
669 self.data_pub = None
669 return
670 return
670 self.data_pub = self.data_pub_class(config=self.config)
671 self.data_pub = self.data_pub_class(config=self.config)
671 self.configurables.append(self.data_pub)
672 self.configurables.append(self.data_pub)
672
673
673 def init_displayhook(self):
674 def init_displayhook(self):
674 # Initialize displayhook, set in/out prompts and printing system
675 # Initialize displayhook, set in/out prompts and printing system
675 self.displayhook = self.displayhook_class(
676 self.displayhook = self.displayhook_class(
676 config=self.config,
677 config=self.config,
677 shell=self,
678 shell=self,
678 cache_size=self.cache_size,
679 cache_size=self.cache_size,
679 )
680 )
680 self.configurables.append(self.displayhook)
681 self.configurables.append(self.displayhook)
681 # This is a context manager that installs/revmoes the displayhook at
682 # This is a context manager that installs/revmoes the displayhook at
682 # the appropriate time.
683 # the appropriate time.
683 self.display_trap = DisplayTrap(hook=self.displayhook)
684 self.display_trap = DisplayTrap(hook=self.displayhook)
684
685
685 def init_reload_doctest(self):
686 def init_reload_doctest(self):
686 # Do a proper resetting of doctest, including the necessary displayhook
687 # Do a proper resetting of doctest, including the necessary displayhook
687 # monkeypatching
688 # monkeypatching
688 try:
689 try:
689 doctest_reload()
690 doctest_reload()
690 except ImportError:
691 except ImportError:
691 warn("doctest module does not exist.")
692 warn("doctest module does not exist.")
692
693
693 def init_latextool(self):
694 def init_latextool(self):
694 """Configure LaTeXTool."""
695 """Configure LaTeXTool."""
695 cfg = LaTeXTool.instance(config=self.config)
696 cfg = LaTeXTool.instance(config=self.config)
696 if cfg not in self.configurables:
697 if cfg not in self.configurables:
697 self.configurables.append(cfg)
698 self.configurables.append(cfg)
698
699
699 def init_virtualenv(self):
700 def init_virtualenv(self):
700 """Add a virtualenv to sys.path so the user can import modules from it.
701 """Add a virtualenv to sys.path so the user can import modules from it.
701 This isn't perfect: it doesn't use the Python interpreter with which the
702 This isn't perfect: it doesn't use the Python interpreter with which the
702 virtualenv was built, and it ignores the --no-site-packages option. A
703 virtualenv was built, and it ignores the --no-site-packages option. A
703 warning will appear suggesting the user installs IPython in the
704 warning will appear suggesting the user installs IPython in the
704 virtualenv, but for many cases, it probably works well enough.
705 virtualenv, but for many cases, it probably works well enough.
705
706
706 Adapted from code snippets online.
707 Adapted from code snippets online.
707
708
708 http://blog.ufsoft.org/2009/1/29/ipython-and-virtualenv
709 http://blog.ufsoft.org/2009/1/29/ipython-and-virtualenv
709 """
710 """
710 if 'VIRTUAL_ENV' not in os.environ:
711 if 'VIRTUAL_ENV' not in os.environ:
711 # Not in a virtualenv
712 # Not in a virtualenv
712 return
713 return
713
714
714 if sys.executable.startswith(os.environ['VIRTUAL_ENV']):
715 if sys.executable.startswith(os.environ['VIRTUAL_ENV']):
715 # Running properly in the virtualenv, don't need to do anything
716 # Running properly in the virtualenv, don't need to do anything
716 return
717 return
717
718
718 warn("Attempting to work in a virtualenv. If you encounter problems, please "
719 warn("Attempting to work in a virtualenv. If you encounter problems, please "
719 "install IPython inside the virtualenv.")
720 "install IPython inside the virtualenv.")
720 if sys.platform == "win32":
721 if sys.platform == "win32":
721 virtual_env = os.path.join(os.environ['VIRTUAL_ENV'], 'Lib', 'site-packages')
722 virtual_env = os.path.join(os.environ['VIRTUAL_ENV'], 'Lib', 'site-packages')
722 else:
723 else:
723 virtual_env = os.path.join(os.environ['VIRTUAL_ENV'], 'lib',
724 virtual_env = os.path.join(os.environ['VIRTUAL_ENV'], 'lib',
724 'python%d.%d' % sys.version_info[:2], 'site-packages')
725 'python%d.%d' % sys.version_info[:2], 'site-packages')
725
726
726 import site
727 import site
727 sys.path.insert(0, virtual_env)
728 sys.path.insert(0, virtual_env)
728 site.addsitedir(virtual_env)
729 site.addsitedir(virtual_env)
729
730
730 #-------------------------------------------------------------------------
731 #-------------------------------------------------------------------------
731 # Things related to injections into the sys module
732 # Things related to injections into the sys module
732 #-------------------------------------------------------------------------
733 #-------------------------------------------------------------------------
733
734
734 def save_sys_module_state(self):
735 def save_sys_module_state(self):
735 """Save the state of hooks in the sys module.
736 """Save the state of hooks in the sys module.
736
737
737 This has to be called after self.user_module is created.
738 This has to be called after self.user_module is created.
738 """
739 """
739 self._orig_sys_module_state = {}
740 self._orig_sys_module_state = {}
740 self._orig_sys_module_state['stdin'] = sys.stdin
741 self._orig_sys_module_state['stdin'] = sys.stdin
741 self._orig_sys_module_state['stdout'] = sys.stdout
742 self._orig_sys_module_state['stdout'] = sys.stdout
742 self._orig_sys_module_state['stderr'] = sys.stderr
743 self._orig_sys_module_state['stderr'] = sys.stderr
743 self._orig_sys_module_state['excepthook'] = sys.excepthook
744 self._orig_sys_module_state['excepthook'] = sys.excepthook
744 self._orig_sys_modules_main_name = self.user_module.__name__
745 self._orig_sys_modules_main_name = self.user_module.__name__
745 self._orig_sys_modules_main_mod = sys.modules.get(self.user_module.__name__)
746 self._orig_sys_modules_main_mod = sys.modules.get(self.user_module.__name__)
746
747
747 def restore_sys_module_state(self):
748 def restore_sys_module_state(self):
748 """Restore the state of the sys module."""
749 """Restore the state of the sys module."""
749 try:
750 try:
750 for k, v in self._orig_sys_module_state.iteritems():
751 for k, v in self._orig_sys_module_state.iteritems():
751 setattr(sys, k, v)
752 setattr(sys, k, v)
752 except AttributeError:
753 except AttributeError:
753 pass
754 pass
754 # Reset what what done in self.init_sys_modules
755 # Reset what what done in self.init_sys_modules
755 if self._orig_sys_modules_main_mod is not None:
756 if self._orig_sys_modules_main_mod is not None:
756 sys.modules[self._orig_sys_modules_main_name] = self._orig_sys_modules_main_mod
757 sys.modules[self._orig_sys_modules_main_name] = self._orig_sys_modules_main_mod
757
758
758 #-------------------------------------------------------------------------
759 #-------------------------------------------------------------------------
759 # Things related to hooks
760 # Things related to hooks
760 #-------------------------------------------------------------------------
761 #-------------------------------------------------------------------------
761
762
762 def init_hooks(self):
763 def init_hooks(self):
763 # hooks holds pointers used for user-side customizations
764 # hooks holds pointers used for user-side customizations
764 self.hooks = Struct()
765 self.hooks = Struct()
765
766
766 self.strdispatchers = {}
767 self.strdispatchers = {}
767
768
768 # Set all default hooks, defined in the IPython.hooks module.
769 # Set all default hooks, defined in the IPython.hooks module.
769 hooks = IPython.core.hooks
770 hooks = IPython.core.hooks
770 for hook_name in hooks.__all__:
771 for hook_name in hooks.__all__:
771 # default hooks have priority 100, i.e. low; user hooks should have
772 # default hooks have priority 100, i.e. low; user hooks should have
772 # 0-100 priority
773 # 0-100 priority
773 self.set_hook(hook_name,getattr(hooks,hook_name), 100)
774 self.set_hook(hook_name,getattr(hooks,hook_name), 100)
774
775
775 def set_hook(self,name,hook, priority = 50, str_key = None, re_key = None):
776 def set_hook(self,name,hook, priority = 50, str_key = None, re_key = None):
776 """set_hook(name,hook) -> sets an internal IPython hook.
777 """set_hook(name,hook) -> sets an internal IPython hook.
777
778
778 IPython exposes some of its internal API as user-modifiable hooks. By
779 IPython exposes some of its internal API as user-modifiable hooks. By
779 adding your function to one of these hooks, you can modify IPython's
780 adding your function to one of these hooks, you can modify IPython's
780 behavior to call at runtime your own routines."""
781 behavior to call at runtime your own routines."""
781
782
782 # At some point in the future, this should validate the hook before it
783 # At some point in the future, this should validate the hook before it
783 # accepts it. Probably at least check that the hook takes the number
784 # accepts it. Probably at least check that the hook takes the number
784 # of args it's supposed to.
785 # of args it's supposed to.
785
786
786 f = types.MethodType(hook,self)
787 f = types.MethodType(hook,self)
787
788
788 # check if the hook is for strdispatcher first
789 # check if the hook is for strdispatcher first
789 if str_key is not None:
790 if str_key is not None:
790 sdp = self.strdispatchers.get(name, StrDispatch())
791 sdp = self.strdispatchers.get(name, StrDispatch())
791 sdp.add_s(str_key, f, priority )
792 sdp.add_s(str_key, f, priority )
792 self.strdispatchers[name] = sdp
793 self.strdispatchers[name] = sdp
793 return
794 return
794 if re_key is not None:
795 if re_key is not None:
795 sdp = self.strdispatchers.get(name, StrDispatch())
796 sdp = self.strdispatchers.get(name, StrDispatch())
796 sdp.add_re(re.compile(re_key), f, priority )
797 sdp.add_re(re.compile(re_key), f, priority )
797 self.strdispatchers[name] = sdp
798 self.strdispatchers[name] = sdp
798 return
799 return
799
800
800 dp = getattr(self.hooks, name, None)
801 dp = getattr(self.hooks, name, None)
801 if name not in IPython.core.hooks.__all__:
802 if name not in IPython.core.hooks.__all__:
802 print("Warning! Hook '%s' is not one of %s" % \
803 print("Warning! Hook '%s' is not one of %s" % \
803 (name, IPython.core.hooks.__all__ ))
804 (name, IPython.core.hooks.__all__ ))
804 if not dp:
805 if not dp:
805 dp = IPython.core.hooks.CommandChainDispatcher()
806 dp = IPython.core.hooks.CommandChainDispatcher()
806
807
807 try:
808 try:
808 dp.add(f,priority)
809 dp.add(f,priority)
809 except AttributeError:
810 except AttributeError:
810 # it was not commandchain, plain old func - replace
811 # it was not commandchain, plain old func - replace
811 dp = f
812 dp = f
812
813
813 setattr(self.hooks,name, dp)
814 setattr(self.hooks,name, dp)
814
815
815 def register_post_execute(self, func):
816 def register_post_execute(self, func):
816 """Register a function for calling after code execution.
817 """Register a function for calling after code execution.
817 """
818 """
818 if not callable(func):
819 if not callable(func):
819 raise ValueError('argument %s must be callable' % func)
820 raise ValueError('argument %s must be callable' % func)
820 self._post_execute[func] = True
821 self._post_execute[func] = True
821
822
822 #-------------------------------------------------------------------------
823 #-------------------------------------------------------------------------
823 # Things related to the "main" module
824 # Things related to the "main" module
824 #-------------------------------------------------------------------------
825 #-------------------------------------------------------------------------
825
826
826 def new_main_mod(self,ns=None):
827 def new_main_mod(self,ns=None):
827 """Return a new 'main' module object for user code execution.
828 """Return a new 'main' module object for user code execution.
828 """
829 """
829 main_mod = self._user_main_module
830 main_mod = self._user_main_module
830 init_fakemod_dict(main_mod,ns)
831 init_fakemod_dict(main_mod,ns)
831 return main_mod
832 return main_mod
832
833
833 def cache_main_mod(self,ns,fname):
834 def cache_main_mod(self,ns,fname):
834 """Cache a main module's namespace.
835 """Cache a main module's namespace.
835
836
836 When scripts are executed via %run, we must keep a reference to the
837 When scripts are executed via %run, we must keep a reference to the
837 namespace of their __main__ module (a FakeModule instance) around so
838 namespace of their __main__ module (a FakeModule instance) around so
838 that Python doesn't clear it, rendering objects defined therein
839 that Python doesn't clear it, rendering objects defined therein
839 useless.
840 useless.
840
841
841 This method keeps said reference in a private dict, keyed by the
842 This method keeps said reference in a private dict, keyed by the
842 absolute path of the module object (which corresponds to the script
843 absolute path of the module object (which corresponds to the script
843 path). This way, for multiple executions of the same script we only
844 path). This way, for multiple executions of the same script we only
844 keep one copy of the namespace (the last one), thus preventing memory
845 keep one copy of the namespace (the last one), thus preventing memory
845 leaks from old references while allowing the objects from the last
846 leaks from old references while allowing the objects from the last
846 execution to be accessible.
847 execution to be accessible.
847
848
848 Note: we can not allow the actual FakeModule instances to be deleted,
849 Note: we can not allow the actual FakeModule instances to be deleted,
849 because of how Python tears down modules (it hard-sets all their
850 because of how Python tears down modules (it hard-sets all their
850 references to None without regard for reference counts). This method
851 references to None without regard for reference counts). This method
851 must therefore make a *copy* of the given namespace, to allow the
852 must therefore make a *copy* of the given namespace, to allow the
852 original module's __dict__ to be cleared and reused.
853 original module's __dict__ to be cleared and reused.
853
854
854
855
855 Parameters
856 Parameters
856 ----------
857 ----------
857 ns : a namespace (a dict, typically)
858 ns : a namespace (a dict, typically)
858
859
859 fname : str
860 fname : str
860 Filename associated with the namespace.
861 Filename associated with the namespace.
861
862
862 Examples
863 Examples
863 --------
864 --------
864
865
865 In [10]: import IPython
866 In [10]: import IPython
866
867
867 In [11]: _ip.cache_main_mod(IPython.__dict__,IPython.__file__)
868 In [11]: _ip.cache_main_mod(IPython.__dict__,IPython.__file__)
868
869
869 In [12]: IPython.__file__ in _ip._main_ns_cache
870 In [12]: IPython.__file__ in _ip._main_ns_cache
870 Out[12]: True
871 Out[12]: True
871 """
872 """
872 self._main_ns_cache[os.path.abspath(fname)] = ns.copy()
873 self._main_ns_cache[os.path.abspath(fname)] = ns.copy()
873
874
874 def clear_main_mod_cache(self):
875 def clear_main_mod_cache(self):
875 """Clear the cache of main modules.
876 """Clear the cache of main modules.
876
877
877 Mainly for use by utilities like %reset.
878 Mainly for use by utilities like %reset.
878
879
879 Examples
880 Examples
880 --------
881 --------
881
882
882 In [15]: import IPython
883 In [15]: import IPython
883
884
884 In [16]: _ip.cache_main_mod(IPython.__dict__,IPython.__file__)
885 In [16]: _ip.cache_main_mod(IPython.__dict__,IPython.__file__)
885
886
886 In [17]: len(_ip._main_ns_cache) > 0
887 In [17]: len(_ip._main_ns_cache) > 0
887 Out[17]: True
888 Out[17]: True
888
889
889 In [18]: _ip.clear_main_mod_cache()
890 In [18]: _ip.clear_main_mod_cache()
890
891
891 In [19]: len(_ip._main_ns_cache) == 0
892 In [19]: len(_ip._main_ns_cache) == 0
892 Out[19]: True
893 Out[19]: True
893 """
894 """
894 self._main_ns_cache.clear()
895 self._main_ns_cache.clear()
895
896
896 #-------------------------------------------------------------------------
897 #-------------------------------------------------------------------------
897 # Things related to debugging
898 # Things related to debugging
898 #-------------------------------------------------------------------------
899 #-------------------------------------------------------------------------
899
900
900 def init_pdb(self):
901 def init_pdb(self):
901 # Set calling of pdb on exceptions
902 # Set calling of pdb on exceptions
902 # self.call_pdb is a property
903 # self.call_pdb is a property
903 self.call_pdb = self.pdb
904 self.call_pdb = self.pdb
904
905
905 def _get_call_pdb(self):
906 def _get_call_pdb(self):
906 return self._call_pdb
907 return self._call_pdb
907
908
908 def _set_call_pdb(self,val):
909 def _set_call_pdb(self,val):
909
910
910 if val not in (0,1,False,True):
911 if val not in (0,1,False,True):
911 raise ValueError('new call_pdb value must be boolean')
912 raise ValueError('new call_pdb value must be boolean')
912
913
913 # store value in instance
914 # store value in instance
914 self._call_pdb = val
915 self._call_pdb = val
915
916
916 # notify the actual exception handlers
917 # notify the actual exception handlers
917 self.InteractiveTB.call_pdb = val
918 self.InteractiveTB.call_pdb = val
918
919
919 call_pdb = property(_get_call_pdb,_set_call_pdb,None,
920 call_pdb = property(_get_call_pdb,_set_call_pdb,None,
920 'Control auto-activation of pdb at exceptions')
921 'Control auto-activation of pdb at exceptions')
921
922
922 def debugger(self,force=False):
923 def debugger(self,force=False):
923 """Call the pydb/pdb debugger.
924 """Call the pydb/pdb debugger.
924
925
925 Keywords:
926 Keywords:
926
927
927 - force(False): by default, this routine checks the instance call_pdb
928 - force(False): by default, this routine checks the instance call_pdb
928 flag and does not actually invoke the debugger if the flag is false.
929 flag and does not actually invoke the debugger if the flag is false.
929 The 'force' option forces the debugger to activate even if the flag
930 The 'force' option forces the debugger to activate even if the flag
930 is false.
931 is false.
931 """
932 """
932
933
933 if not (force or self.call_pdb):
934 if not (force or self.call_pdb):
934 return
935 return
935
936
936 if not hasattr(sys,'last_traceback'):
937 if not hasattr(sys,'last_traceback'):
937 error('No traceback has been produced, nothing to debug.')
938 error('No traceback has been produced, nothing to debug.')
938 return
939 return
939
940
940 # use pydb if available
941 # use pydb if available
941 if debugger.has_pydb:
942 if debugger.has_pydb:
942 from pydb import pm
943 from pydb import pm
943 else:
944 else:
944 # fallback to our internal debugger
945 # fallback to our internal debugger
945 pm = lambda : self.InteractiveTB.debugger(force=True)
946 pm = lambda : self.InteractiveTB.debugger(force=True)
946
947
947 with self.readline_no_record:
948 with self.readline_no_record:
948 pm()
949 pm()
949
950
950 #-------------------------------------------------------------------------
951 #-------------------------------------------------------------------------
951 # Things related to IPython's various namespaces
952 # Things related to IPython's various namespaces
952 #-------------------------------------------------------------------------
953 #-------------------------------------------------------------------------
953 default_user_namespaces = True
954 default_user_namespaces = True
954
955
955 def init_create_namespaces(self, user_module=None, user_ns=None):
956 def init_create_namespaces(self, user_module=None, user_ns=None):
956 # Create the namespace where the user will operate. user_ns is
957 # Create the namespace where the user will operate. user_ns is
957 # normally the only one used, and it is passed to the exec calls as
958 # normally the only one used, and it is passed to the exec calls as
958 # the locals argument. But we do carry a user_global_ns namespace
959 # the locals argument. But we do carry a user_global_ns namespace
959 # given as the exec 'globals' argument, This is useful in embedding
960 # given as the exec 'globals' argument, This is useful in embedding
960 # situations where the ipython shell opens in a context where the
961 # situations where the ipython shell opens in a context where the
961 # distinction between locals and globals is meaningful. For
962 # distinction between locals and globals is meaningful. For
962 # non-embedded contexts, it is just the same object as the user_ns dict.
963 # non-embedded contexts, it is just the same object as the user_ns dict.
963
964
964 # FIXME. For some strange reason, __builtins__ is showing up at user
965 # FIXME. For some strange reason, __builtins__ is showing up at user
965 # level as a dict instead of a module. This is a manual fix, but I
966 # level as a dict instead of a module. This is a manual fix, but I
966 # should really track down where the problem is coming from. Alex
967 # should really track down where the problem is coming from. Alex
967 # Schmolck reported this problem first.
968 # Schmolck reported this problem first.
968
969
969 # A useful post by Alex Martelli on this topic:
970 # A useful post by Alex Martelli on this topic:
970 # Re: inconsistent value from __builtins__
971 # Re: inconsistent value from __builtins__
971 # Von: Alex Martelli <aleaxit@yahoo.com>
972 # Von: Alex Martelli <aleaxit@yahoo.com>
972 # Datum: Freitag 01 Oktober 2004 04:45:34 nachmittags/abends
973 # Datum: Freitag 01 Oktober 2004 04:45:34 nachmittags/abends
973 # Gruppen: comp.lang.python
974 # Gruppen: comp.lang.python
974
975
975 # Michael Hohn <hohn@hooknose.lbl.gov> wrote:
976 # Michael Hohn <hohn@hooknose.lbl.gov> wrote:
976 # > >>> print type(builtin_check.get_global_binding('__builtins__'))
977 # > >>> print type(builtin_check.get_global_binding('__builtins__'))
977 # > <type 'dict'>
978 # > <type 'dict'>
978 # > >>> print type(__builtins__)
979 # > >>> print type(__builtins__)
979 # > <type 'module'>
980 # > <type 'module'>
980 # > Is this difference in return value intentional?
981 # > Is this difference in return value intentional?
981
982
982 # Well, it's documented that '__builtins__' can be either a dictionary
983 # Well, it's documented that '__builtins__' can be either a dictionary
983 # or a module, and it's been that way for a long time. Whether it's
984 # or a module, and it's been that way for a long time. Whether it's
984 # intentional (or sensible), I don't know. In any case, the idea is
985 # intentional (or sensible), I don't know. In any case, the idea is
985 # that if you need to access the built-in namespace directly, you
986 # that if you need to access the built-in namespace directly, you
986 # should start with "import __builtin__" (note, no 's') which will
987 # should start with "import __builtin__" (note, no 's') which will
987 # definitely give you a module. Yeah, it's somewhat confusing:-(.
988 # definitely give you a module. Yeah, it's somewhat confusing:-(.
988
989
989 # These routines return a properly built module and dict as needed by
990 # These routines return a properly built module and dict as needed by
990 # the rest of the code, and can also be used by extension writers to
991 # the rest of the code, and can also be used by extension writers to
991 # generate properly initialized namespaces.
992 # generate properly initialized namespaces.
992 if (user_ns is not None) or (user_module is not None):
993 if (user_ns is not None) or (user_module is not None):
993 self.default_user_namespaces = False
994 self.default_user_namespaces = False
994 self.user_module, self.user_ns = self.prepare_user_module(user_module, user_ns)
995 self.user_module, self.user_ns = self.prepare_user_module(user_module, user_ns)
995
996
996 # A record of hidden variables we have added to the user namespace, so
997 # A record of hidden variables we have added to the user namespace, so
997 # we can list later only variables defined in actual interactive use.
998 # we can list later only variables defined in actual interactive use.
998 self.user_ns_hidden = set()
999 self.user_ns_hidden = set()
999
1000
1000 # Now that FakeModule produces a real module, we've run into a nasty
1001 # Now that FakeModule produces a real module, we've run into a nasty
1001 # problem: after script execution (via %run), the module where the user
1002 # problem: after script execution (via %run), the module where the user
1002 # code ran is deleted. Now that this object is a true module (needed
1003 # code ran is deleted. Now that this object is a true module (needed
1003 # so docetst and other tools work correctly), the Python module
1004 # so docetst and other tools work correctly), the Python module
1004 # teardown mechanism runs over it, and sets to None every variable
1005 # teardown mechanism runs over it, and sets to None every variable
1005 # present in that module. Top-level references to objects from the
1006 # present in that module. Top-level references to objects from the
1006 # script survive, because the user_ns is updated with them. However,
1007 # script survive, because the user_ns is updated with them. However,
1007 # calling functions defined in the script that use other things from
1008 # calling functions defined in the script that use other things from
1008 # the script will fail, because the function's closure had references
1009 # the script will fail, because the function's closure had references
1009 # to the original objects, which are now all None. So we must protect
1010 # to the original objects, which are now all None. So we must protect
1010 # these modules from deletion by keeping a cache.
1011 # these modules from deletion by keeping a cache.
1011 #
1012 #
1012 # To avoid keeping stale modules around (we only need the one from the
1013 # To avoid keeping stale modules around (we only need the one from the
1013 # last run), we use a dict keyed with the full path to the script, so
1014 # last run), we use a dict keyed with the full path to the script, so
1014 # only the last version of the module is held in the cache. Note,
1015 # only the last version of the module is held in the cache. Note,
1015 # however, that we must cache the module *namespace contents* (their
1016 # however, that we must cache the module *namespace contents* (their
1016 # __dict__). Because if we try to cache the actual modules, old ones
1017 # __dict__). Because if we try to cache the actual modules, old ones
1017 # (uncached) could be destroyed while still holding references (such as
1018 # (uncached) could be destroyed while still holding references (such as
1018 # those held by GUI objects that tend to be long-lived)>
1019 # those held by GUI objects that tend to be long-lived)>
1019 #
1020 #
1020 # The %reset command will flush this cache. See the cache_main_mod()
1021 # The %reset command will flush this cache. See the cache_main_mod()
1021 # and clear_main_mod_cache() methods for details on use.
1022 # and clear_main_mod_cache() methods for details on use.
1022
1023
1023 # This is the cache used for 'main' namespaces
1024 # This is the cache used for 'main' namespaces
1024 self._main_ns_cache = {}
1025 self._main_ns_cache = {}
1025 # And this is the single instance of FakeModule whose __dict__ we keep
1026 # And this is the single instance of FakeModule whose __dict__ we keep
1026 # copying and clearing for reuse on each %run
1027 # copying and clearing for reuse on each %run
1027 self._user_main_module = FakeModule()
1028 self._user_main_module = FakeModule()
1028
1029
1029 # A table holding all the namespaces IPython deals with, so that
1030 # A table holding all the namespaces IPython deals with, so that
1030 # introspection facilities can search easily.
1031 # introspection facilities can search easily.
1031 self.ns_table = {'user_global':self.user_module.__dict__,
1032 self.ns_table = {'user_global':self.user_module.__dict__,
1032 'user_local':self.user_ns,
1033 'user_local':self.user_ns,
1033 'builtin':builtin_mod.__dict__
1034 'builtin':builtin_mod.__dict__
1034 }
1035 }
1035
1036
1036 @property
1037 @property
1037 def user_global_ns(self):
1038 def user_global_ns(self):
1038 return self.user_module.__dict__
1039 return self.user_module.__dict__
1039
1040
1040 def prepare_user_module(self, user_module=None, user_ns=None):
1041 def prepare_user_module(self, user_module=None, user_ns=None):
1041 """Prepare the module and namespace in which user code will be run.
1042 """Prepare the module and namespace in which user code will be run.
1042
1043
1043 When IPython is started normally, both parameters are None: a new module
1044 When IPython is started normally, both parameters are None: a new module
1044 is created automatically, and its __dict__ used as the namespace.
1045 is created automatically, and its __dict__ used as the namespace.
1045
1046
1046 If only user_module is provided, its __dict__ is used as the namespace.
1047 If only user_module is provided, its __dict__ is used as the namespace.
1047 If only user_ns is provided, a dummy module is created, and user_ns
1048 If only user_ns is provided, a dummy module is created, and user_ns
1048 becomes the global namespace. If both are provided (as they may be
1049 becomes the global namespace. If both are provided (as they may be
1049 when embedding), user_ns is the local namespace, and user_module
1050 when embedding), user_ns is the local namespace, and user_module
1050 provides the global namespace.
1051 provides the global namespace.
1051
1052
1052 Parameters
1053 Parameters
1053 ----------
1054 ----------
1054 user_module : module, optional
1055 user_module : module, optional
1055 The current user module in which IPython is being run. If None,
1056 The current user module in which IPython is being run. If None,
1056 a clean module will be created.
1057 a clean module will be created.
1057 user_ns : dict, optional
1058 user_ns : dict, optional
1058 A namespace in which to run interactive commands.
1059 A namespace in which to run interactive commands.
1059
1060
1060 Returns
1061 Returns
1061 -------
1062 -------
1062 A tuple of user_module and user_ns, each properly initialised.
1063 A tuple of user_module and user_ns, each properly initialised.
1063 """
1064 """
1064 if user_module is None and user_ns is not None:
1065 if user_module is None and user_ns is not None:
1065 user_ns.setdefault("__name__", "__main__")
1066 user_ns.setdefault("__name__", "__main__")
1066 class DummyMod(object):
1067 class DummyMod(object):
1067 "A dummy module used for IPython's interactive namespace."
1068 "A dummy module used for IPython's interactive namespace."
1068 pass
1069 pass
1069 user_module = DummyMod()
1070 user_module = DummyMod()
1070 user_module.__dict__ = user_ns
1071 user_module.__dict__ = user_ns
1071
1072
1072 if user_module is None:
1073 if user_module is None:
1073 user_module = types.ModuleType("__main__",
1074 user_module = types.ModuleType("__main__",
1074 doc="Automatically created module for IPython interactive environment")
1075 doc="Automatically created module for IPython interactive environment")
1075
1076
1076 # We must ensure that __builtin__ (without the final 's') is always
1077 # We must ensure that __builtin__ (without the final 's') is always
1077 # available and pointing to the __builtin__ *module*. For more details:
1078 # available and pointing to the __builtin__ *module*. For more details:
1078 # http://mail.python.org/pipermail/python-dev/2001-April/014068.html
1079 # http://mail.python.org/pipermail/python-dev/2001-April/014068.html
1079 user_module.__dict__.setdefault('__builtin__', builtin_mod)
1080 user_module.__dict__.setdefault('__builtin__', builtin_mod)
1080 user_module.__dict__.setdefault('__builtins__', builtin_mod)
1081 user_module.__dict__.setdefault('__builtins__', builtin_mod)
1081
1082
1082 if user_ns is None:
1083 if user_ns is None:
1083 user_ns = user_module.__dict__
1084 user_ns = user_module.__dict__
1084
1085
1085 return user_module, user_ns
1086 return user_module, user_ns
1086
1087
1087 def init_sys_modules(self):
1088 def init_sys_modules(self):
1088 # We need to insert into sys.modules something that looks like a
1089 # We need to insert into sys.modules something that looks like a
1089 # module but which accesses the IPython namespace, for shelve and
1090 # module but which accesses the IPython namespace, for shelve and
1090 # pickle to work interactively. Normally they rely on getting
1091 # pickle to work interactively. Normally they rely on getting
1091 # everything out of __main__, but for embedding purposes each IPython
1092 # everything out of __main__, but for embedding purposes each IPython
1092 # instance has its own private namespace, so we can't go shoving
1093 # instance has its own private namespace, so we can't go shoving
1093 # everything into __main__.
1094 # everything into __main__.
1094
1095
1095 # note, however, that we should only do this for non-embedded
1096 # note, however, that we should only do this for non-embedded
1096 # ipythons, which really mimic the __main__.__dict__ with their own
1097 # ipythons, which really mimic the __main__.__dict__ with their own
1097 # namespace. Embedded instances, on the other hand, should not do
1098 # namespace. Embedded instances, on the other hand, should not do
1098 # this because they need to manage the user local/global namespaces
1099 # this because they need to manage the user local/global namespaces
1099 # only, but they live within a 'normal' __main__ (meaning, they
1100 # only, but they live within a 'normal' __main__ (meaning, they
1100 # shouldn't overtake the execution environment of the script they're
1101 # shouldn't overtake the execution environment of the script they're
1101 # embedded in).
1102 # embedded in).
1102
1103
1103 # This is overridden in the InteractiveShellEmbed subclass to a no-op.
1104 # This is overridden in the InteractiveShellEmbed subclass to a no-op.
1104 main_name = self.user_module.__name__
1105 main_name = self.user_module.__name__
1105 sys.modules[main_name] = self.user_module
1106 sys.modules[main_name] = self.user_module
1106
1107
1107 def init_user_ns(self):
1108 def init_user_ns(self):
1108 """Initialize all user-visible namespaces to their minimum defaults.
1109 """Initialize all user-visible namespaces to their minimum defaults.
1109
1110
1110 Certain history lists are also initialized here, as they effectively
1111 Certain history lists are also initialized here, as they effectively
1111 act as user namespaces.
1112 act as user namespaces.
1112
1113
1113 Notes
1114 Notes
1114 -----
1115 -----
1115 All data structures here are only filled in, they are NOT reset by this
1116 All data structures here are only filled in, they are NOT reset by this
1116 method. If they were not empty before, data will simply be added to
1117 method. If they were not empty before, data will simply be added to
1117 therm.
1118 therm.
1118 """
1119 """
1119 # This function works in two parts: first we put a few things in
1120 # This function works in two parts: first we put a few things in
1120 # user_ns, and we sync that contents into user_ns_hidden so that these
1121 # user_ns, and we sync that contents into user_ns_hidden so that these
1121 # initial variables aren't shown by %who. After the sync, we add the
1122 # initial variables aren't shown by %who. After the sync, we add the
1122 # rest of what we *do* want the user to see with %who even on a new
1123 # rest of what we *do* want the user to see with %who even on a new
1123 # session (probably nothing, so theye really only see their own stuff)
1124 # session (probably nothing, so theye really only see their own stuff)
1124
1125
1125 # The user dict must *always* have a __builtin__ reference to the
1126 # The user dict must *always* have a __builtin__ reference to the
1126 # Python standard __builtin__ namespace, which must be imported.
1127 # Python standard __builtin__ namespace, which must be imported.
1127 # This is so that certain operations in prompt evaluation can be
1128 # This is so that certain operations in prompt evaluation can be
1128 # reliably executed with builtins. Note that we can NOT use
1129 # reliably executed with builtins. Note that we can NOT use
1129 # __builtins__ (note the 's'), because that can either be a dict or a
1130 # __builtins__ (note the 's'), because that can either be a dict or a
1130 # module, and can even mutate at runtime, depending on the context
1131 # module, and can even mutate at runtime, depending on the context
1131 # (Python makes no guarantees on it). In contrast, __builtin__ is
1132 # (Python makes no guarantees on it). In contrast, __builtin__ is
1132 # always a module object, though it must be explicitly imported.
1133 # always a module object, though it must be explicitly imported.
1133
1134
1134 # For more details:
1135 # For more details:
1135 # http://mail.python.org/pipermail/python-dev/2001-April/014068.html
1136 # http://mail.python.org/pipermail/python-dev/2001-April/014068.html
1136 ns = dict()
1137 ns = dict()
1137
1138
1138 # Put 'help' in the user namespace
1139 # Put 'help' in the user namespace
1139 try:
1140 try:
1140 from site import _Helper
1141 from site import _Helper
1141 ns['help'] = _Helper()
1142 ns['help'] = _Helper()
1142 except ImportError:
1143 except ImportError:
1143 warn('help() not available - check site.py')
1144 warn('help() not available - check site.py')
1144
1145
1145 # make global variables for user access to the histories
1146 # make global variables for user access to the histories
1146 ns['_ih'] = self.history_manager.input_hist_parsed
1147 ns['_ih'] = self.history_manager.input_hist_parsed
1147 ns['_oh'] = self.history_manager.output_hist
1148 ns['_oh'] = self.history_manager.output_hist
1148 ns['_dh'] = self.history_manager.dir_hist
1149 ns['_dh'] = self.history_manager.dir_hist
1149
1150
1150 ns['_sh'] = shadowns
1151 ns['_sh'] = shadowns
1151
1152
1152 # user aliases to input and output histories. These shouldn't show up
1153 # user aliases to input and output histories. These shouldn't show up
1153 # in %who, as they can have very large reprs.
1154 # in %who, as they can have very large reprs.
1154 ns['In'] = self.history_manager.input_hist_parsed
1155 ns['In'] = self.history_manager.input_hist_parsed
1155 ns['Out'] = self.history_manager.output_hist
1156 ns['Out'] = self.history_manager.output_hist
1156
1157
1157 # Store myself as the public api!!!
1158 # Store myself as the public api!!!
1158 ns['get_ipython'] = self.get_ipython
1159 ns['get_ipython'] = self.get_ipython
1159
1160
1160 ns['exit'] = self.exiter
1161 ns['exit'] = self.exiter
1161 ns['quit'] = self.exiter
1162 ns['quit'] = self.exiter
1162
1163
1163 # Sync what we've added so far to user_ns_hidden so these aren't seen
1164 # Sync what we've added so far to user_ns_hidden so these aren't seen
1164 # by %who
1165 # by %who
1165 self.user_ns_hidden.update(ns)
1166 self.user_ns_hidden.update(ns)
1166
1167
1167 # Anything put into ns now would show up in %who. Think twice before
1168 # Anything put into ns now would show up in %who. Think twice before
1168 # putting anything here, as we really want %who to show the user their
1169 # putting anything here, as we really want %who to show the user their
1169 # stuff, not our variables.
1170 # stuff, not our variables.
1170
1171
1171 # Finally, update the real user's namespace
1172 # Finally, update the real user's namespace
1172 self.user_ns.update(ns)
1173 self.user_ns.update(ns)
1173
1174
1174 @property
1175 @property
1175 def all_ns_refs(self):
1176 def all_ns_refs(self):
1176 """Get a list of references to all the namespace dictionaries in which
1177 """Get a list of references to all the namespace dictionaries in which
1177 IPython might store a user-created object.
1178 IPython might store a user-created object.
1178
1179
1179 Note that this does not include the displayhook, which also caches
1180 Note that this does not include the displayhook, which also caches
1180 objects from the output."""
1181 objects from the output."""
1181 return [self.user_ns, self.user_global_ns,
1182 return [self.user_ns, self.user_global_ns,
1182 self._user_main_module.__dict__] + self._main_ns_cache.values()
1183 self._user_main_module.__dict__] + self._main_ns_cache.values()
1183
1184
1184 def reset(self, new_session=True):
1185 def reset(self, new_session=True):
1185 """Clear all internal namespaces, and attempt to release references to
1186 """Clear all internal namespaces, and attempt to release references to
1186 user objects.
1187 user objects.
1187
1188
1188 If new_session is True, a new history session will be opened.
1189 If new_session is True, a new history session will be opened.
1189 """
1190 """
1190 # Clear histories
1191 # Clear histories
1191 self.history_manager.reset(new_session)
1192 self.history_manager.reset(new_session)
1192 # Reset counter used to index all histories
1193 # Reset counter used to index all histories
1193 if new_session:
1194 if new_session:
1194 self.execution_count = 1
1195 self.execution_count = 1
1195
1196
1196 # Flush cached output items
1197 # Flush cached output items
1197 if self.displayhook.do_full_cache:
1198 if self.displayhook.do_full_cache:
1198 self.displayhook.flush()
1199 self.displayhook.flush()
1199
1200
1200 # The main execution namespaces must be cleared very carefully,
1201 # The main execution namespaces must be cleared very carefully,
1201 # skipping the deletion of the builtin-related keys, because doing so
1202 # skipping the deletion of the builtin-related keys, because doing so
1202 # would cause errors in many object's __del__ methods.
1203 # would cause errors in many object's __del__ methods.
1203 if self.user_ns is not self.user_global_ns:
1204 if self.user_ns is not self.user_global_ns:
1204 self.user_ns.clear()
1205 self.user_ns.clear()
1205 ns = self.user_global_ns
1206 ns = self.user_global_ns
1206 drop_keys = set(ns.keys())
1207 drop_keys = set(ns.keys())
1207 drop_keys.discard('__builtin__')
1208 drop_keys.discard('__builtin__')
1208 drop_keys.discard('__builtins__')
1209 drop_keys.discard('__builtins__')
1209 drop_keys.discard('__name__')
1210 drop_keys.discard('__name__')
1210 for k in drop_keys:
1211 for k in drop_keys:
1211 del ns[k]
1212 del ns[k]
1212
1213
1213 self.user_ns_hidden.clear()
1214 self.user_ns_hidden.clear()
1214
1215
1215 # Restore the user namespaces to minimal usability
1216 # Restore the user namespaces to minimal usability
1216 self.init_user_ns()
1217 self.init_user_ns()
1217
1218
1218 # Restore the default and user aliases
1219 # Restore the default and user aliases
1219 self.alias_manager.clear_aliases()
1220 self.alias_manager.clear_aliases()
1220 self.alias_manager.init_aliases()
1221 self.alias_manager.init_aliases()
1221
1222
1222 # Flush the private list of module references kept for script
1223 # Flush the private list of module references kept for script
1223 # execution protection
1224 # execution protection
1224 self.clear_main_mod_cache()
1225 self.clear_main_mod_cache()
1225
1226
1226 # Clear out the namespace from the last %run
1227 # Clear out the namespace from the last %run
1227 self.new_main_mod()
1228 self.new_main_mod()
1228
1229
1229 def del_var(self, varname, by_name=False):
1230 def del_var(self, varname, by_name=False):
1230 """Delete a variable from the various namespaces, so that, as
1231 """Delete a variable from the various namespaces, so that, as
1231 far as possible, we're not keeping any hidden references to it.
1232 far as possible, we're not keeping any hidden references to it.
1232
1233
1233 Parameters
1234 Parameters
1234 ----------
1235 ----------
1235 varname : str
1236 varname : str
1236 The name of the variable to delete.
1237 The name of the variable to delete.
1237 by_name : bool
1238 by_name : bool
1238 If True, delete variables with the given name in each
1239 If True, delete variables with the given name in each
1239 namespace. If False (default), find the variable in the user
1240 namespace. If False (default), find the variable in the user
1240 namespace, and delete references to it.
1241 namespace, and delete references to it.
1241 """
1242 """
1242 if varname in ('__builtin__', '__builtins__'):
1243 if varname in ('__builtin__', '__builtins__'):
1243 raise ValueError("Refusing to delete %s" % varname)
1244 raise ValueError("Refusing to delete %s" % varname)
1244
1245
1245 ns_refs = self.all_ns_refs
1246 ns_refs = self.all_ns_refs
1246
1247
1247 if by_name: # Delete by name
1248 if by_name: # Delete by name
1248 for ns in ns_refs:
1249 for ns in ns_refs:
1249 try:
1250 try:
1250 del ns[varname]
1251 del ns[varname]
1251 except KeyError:
1252 except KeyError:
1252 pass
1253 pass
1253 else: # Delete by object
1254 else: # Delete by object
1254 try:
1255 try:
1255 obj = self.user_ns[varname]
1256 obj = self.user_ns[varname]
1256 except KeyError:
1257 except KeyError:
1257 raise NameError("name '%s' is not defined" % varname)
1258 raise NameError("name '%s' is not defined" % varname)
1258 # Also check in output history
1259 # Also check in output history
1259 ns_refs.append(self.history_manager.output_hist)
1260 ns_refs.append(self.history_manager.output_hist)
1260 for ns in ns_refs:
1261 for ns in ns_refs:
1261 to_delete = [n for n, o in ns.iteritems() if o is obj]
1262 to_delete = [n for n, o in ns.iteritems() if o is obj]
1262 for name in to_delete:
1263 for name in to_delete:
1263 del ns[name]
1264 del ns[name]
1264
1265
1265 # displayhook keeps extra references, but not in a dictionary
1266 # displayhook keeps extra references, but not in a dictionary
1266 for name in ('_', '__', '___'):
1267 for name in ('_', '__', '___'):
1267 if getattr(self.displayhook, name) is obj:
1268 if getattr(self.displayhook, name) is obj:
1268 setattr(self.displayhook, name, None)
1269 setattr(self.displayhook, name, None)
1269
1270
1270 def reset_selective(self, regex=None):
1271 def reset_selective(self, regex=None):
1271 """Clear selective variables from internal namespaces based on a
1272 """Clear selective variables from internal namespaces based on a
1272 specified regular expression.
1273 specified regular expression.
1273
1274
1274 Parameters
1275 Parameters
1275 ----------
1276 ----------
1276 regex : string or compiled pattern, optional
1277 regex : string or compiled pattern, optional
1277 A regular expression pattern that will be used in searching
1278 A regular expression pattern that will be used in searching
1278 variable names in the users namespaces.
1279 variable names in the users namespaces.
1279 """
1280 """
1280 if regex is not None:
1281 if regex is not None:
1281 try:
1282 try:
1282 m = re.compile(regex)
1283 m = re.compile(regex)
1283 except TypeError:
1284 except TypeError:
1284 raise TypeError('regex must be a string or compiled pattern')
1285 raise TypeError('regex must be a string or compiled pattern')
1285 # Search for keys in each namespace that match the given regex
1286 # Search for keys in each namespace that match the given regex
1286 # If a match is found, delete the key/value pair.
1287 # If a match is found, delete the key/value pair.
1287 for ns in self.all_ns_refs:
1288 for ns in self.all_ns_refs:
1288 for var in ns:
1289 for var in ns:
1289 if m.search(var):
1290 if m.search(var):
1290 del ns[var]
1291 del ns[var]
1291
1292
1292 def push(self, variables, interactive=True):
1293 def push(self, variables, interactive=True):
1293 """Inject a group of variables into the IPython user namespace.
1294 """Inject a group of variables into the IPython user namespace.
1294
1295
1295 Parameters
1296 Parameters
1296 ----------
1297 ----------
1297 variables : dict, str or list/tuple of str
1298 variables : dict, str or list/tuple of str
1298 The variables to inject into the user's namespace. If a dict, a
1299 The variables to inject into the user's namespace. If a dict, a
1299 simple update is done. If a str, the string is assumed to have
1300 simple update is done. If a str, the string is assumed to have
1300 variable names separated by spaces. A list/tuple of str can also
1301 variable names separated by spaces. A list/tuple of str can also
1301 be used to give the variable names. If just the variable names are
1302 be used to give the variable names. If just the variable names are
1302 give (list/tuple/str) then the variable values looked up in the
1303 give (list/tuple/str) then the variable values looked up in the
1303 callers frame.
1304 callers frame.
1304 interactive : bool
1305 interactive : bool
1305 If True (default), the variables will be listed with the ``who``
1306 If True (default), the variables will be listed with the ``who``
1306 magic.
1307 magic.
1307 """
1308 """
1308 vdict = None
1309 vdict = None
1309
1310
1310 # We need a dict of name/value pairs to do namespace updates.
1311 # We need a dict of name/value pairs to do namespace updates.
1311 if isinstance(variables, dict):
1312 if isinstance(variables, dict):
1312 vdict = variables
1313 vdict = variables
1313 elif isinstance(variables, (basestring, list, tuple)):
1314 elif isinstance(variables, (basestring, list, tuple)):
1314 if isinstance(variables, basestring):
1315 if isinstance(variables, basestring):
1315 vlist = variables.split()
1316 vlist = variables.split()
1316 else:
1317 else:
1317 vlist = variables
1318 vlist = variables
1318 vdict = {}
1319 vdict = {}
1319 cf = sys._getframe(1)
1320 cf = sys._getframe(1)
1320 for name in vlist:
1321 for name in vlist:
1321 try:
1322 try:
1322 vdict[name] = eval(name, cf.f_globals, cf.f_locals)
1323 vdict[name] = eval(name, cf.f_globals, cf.f_locals)
1323 except:
1324 except:
1324 print('Could not get variable %s from %s' %
1325 print('Could not get variable %s from %s' %
1325 (name,cf.f_code.co_name))
1326 (name,cf.f_code.co_name))
1326 else:
1327 else:
1327 raise ValueError('variables must be a dict/str/list/tuple')
1328 raise ValueError('variables must be a dict/str/list/tuple')
1328
1329
1329 # Propagate variables to user namespace
1330 # Propagate variables to user namespace
1330 self.user_ns.update(vdict)
1331 self.user_ns.update(vdict)
1331
1332
1332 # And configure interactive visibility
1333 # And configure interactive visibility
1333 user_ns_hidden = self.user_ns_hidden
1334 user_ns_hidden = self.user_ns_hidden
1334 if interactive:
1335 if interactive:
1335 user_ns_hidden.difference_update(vdict)
1336 user_ns_hidden.difference_update(vdict)
1336 else:
1337 else:
1337 user_ns_hidden.update(vdict)
1338 user_ns_hidden.update(vdict)
1338
1339
1339 def drop_by_id(self, variables):
1340 def drop_by_id(self, variables):
1340 """Remove a dict of variables from the user namespace, if they are the
1341 """Remove a dict of variables from the user namespace, if they are the
1341 same as the values in the dictionary.
1342 same as the values in the dictionary.
1342
1343
1343 This is intended for use by extensions: variables that they've added can
1344 This is intended for use by extensions: variables that they've added can
1344 be taken back out if they are unloaded, without removing any that the
1345 be taken back out if they are unloaded, without removing any that the
1345 user has overwritten.
1346 user has overwritten.
1346
1347
1347 Parameters
1348 Parameters
1348 ----------
1349 ----------
1349 variables : dict
1350 variables : dict
1350 A dictionary mapping object names (as strings) to the objects.
1351 A dictionary mapping object names (as strings) to the objects.
1351 """
1352 """
1352 for name, obj in variables.iteritems():
1353 for name, obj in variables.iteritems():
1353 if name in self.user_ns and self.user_ns[name] is obj:
1354 if name in self.user_ns and self.user_ns[name] is obj:
1354 del self.user_ns[name]
1355 del self.user_ns[name]
1355 self.user_ns_hidden.discard(name)
1356 self.user_ns_hidden.discard(name)
1356
1357
1357 #-------------------------------------------------------------------------
1358 #-------------------------------------------------------------------------
1358 # Things related to object introspection
1359 # Things related to object introspection
1359 #-------------------------------------------------------------------------
1360 #-------------------------------------------------------------------------
1360
1361
1361 def _ofind(self, oname, namespaces=None):
1362 def _ofind(self, oname, namespaces=None):
1362 """Find an object in the available namespaces.
1363 """Find an object in the available namespaces.
1363
1364
1364 self._ofind(oname) -> dict with keys: found,obj,ospace,ismagic
1365 self._ofind(oname) -> dict with keys: found,obj,ospace,ismagic
1365
1366
1366 Has special code to detect magic functions.
1367 Has special code to detect magic functions.
1367 """
1368 """
1368 oname = oname.strip()
1369 oname = oname.strip()
1369 #print '1- oname: <%r>' % oname # dbg
1370 #print '1- oname: <%r>' % oname # dbg
1370 if not oname.startswith(ESC_MAGIC) and \
1371 if not oname.startswith(ESC_MAGIC) and \
1371 not oname.startswith(ESC_MAGIC2) and \
1372 not oname.startswith(ESC_MAGIC2) and \
1372 not py3compat.isidentifier(oname, dotted=True):
1373 not py3compat.isidentifier(oname, dotted=True):
1373 return dict(found=False)
1374 return dict(found=False)
1374
1375
1375 alias_ns = None
1376 alias_ns = None
1376 if namespaces is None:
1377 if namespaces is None:
1377 # Namespaces to search in:
1378 # Namespaces to search in:
1378 # Put them in a list. The order is important so that we
1379 # Put them in a list. The order is important so that we
1379 # find things in the same order that Python finds them.
1380 # find things in the same order that Python finds them.
1380 namespaces = [ ('Interactive', self.user_ns),
1381 namespaces = [ ('Interactive', self.user_ns),
1381 ('Interactive (global)', self.user_global_ns),
1382 ('Interactive (global)', self.user_global_ns),
1382 ('Python builtin', builtin_mod.__dict__),
1383 ('Python builtin', builtin_mod.__dict__),
1383 ('Alias', self.alias_manager.alias_table),
1384 ('Alias', self.alias_manager.alias_table),
1384 ]
1385 ]
1385 alias_ns = self.alias_manager.alias_table
1386 alias_ns = self.alias_manager.alias_table
1386
1387
1387 # initialize results to 'null'
1388 # initialize results to 'null'
1388 found = False; obj = None; ospace = None; ds = None;
1389 found = False; obj = None; ospace = None; ds = None;
1389 ismagic = False; isalias = False; parent = None
1390 ismagic = False; isalias = False; parent = None
1390
1391
1391 # We need to special-case 'print', which as of python2.6 registers as a
1392 # We need to special-case 'print', which as of python2.6 registers as a
1392 # function but should only be treated as one if print_function was
1393 # function but should only be treated as one if print_function was
1393 # loaded with a future import. In this case, just bail.
1394 # loaded with a future import. In this case, just bail.
1394 if (oname == 'print' and not py3compat.PY3 and not \
1395 if (oname == 'print' and not py3compat.PY3 and not \
1395 (self.compile.compiler_flags & __future__.CO_FUTURE_PRINT_FUNCTION)):
1396 (self.compile.compiler_flags & __future__.CO_FUTURE_PRINT_FUNCTION)):
1396 return {'found':found, 'obj':obj, 'namespace':ospace,
1397 return {'found':found, 'obj':obj, 'namespace':ospace,
1397 'ismagic':ismagic, 'isalias':isalias, 'parent':parent}
1398 'ismagic':ismagic, 'isalias':isalias, 'parent':parent}
1398
1399
1399 # Look for the given name by splitting it in parts. If the head is
1400 # Look for the given name by splitting it in parts. If the head is
1400 # found, then we look for all the remaining parts as members, and only
1401 # found, then we look for all the remaining parts as members, and only
1401 # declare success if we can find them all.
1402 # declare success if we can find them all.
1402 oname_parts = oname.split('.')
1403 oname_parts = oname.split('.')
1403 oname_head, oname_rest = oname_parts[0],oname_parts[1:]
1404 oname_head, oname_rest = oname_parts[0],oname_parts[1:]
1404 for nsname,ns in namespaces:
1405 for nsname,ns in namespaces:
1405 try:
1406 try:
1406 obj = ns[oname_head]
1407 obj = ns[oname_head]
1407 except KeyError:
1408 except KeyError:
1408 continue
1409 continue
1409 else:
1410 else:
1410 #print 'oname_rest:', oname_rest # dbg
1411 #print 'oname_rest:', oname_rest # dbg
1411 for part in oname_rest:
1412 for part in oname_rest:
1412 try:
1413 try:
1413 parent = obj
1414 parent = obj
1414 obj = getattr(obj,part)
1415 obj = getattr(obj,part)
1415 except:
1416 except:
1416 # Blanket except b/c some badly implemented objects
1417 # Blanket except b/c some badly implemented objects
1417 # allow __getattr__ to raise exceptions other than
1418 # allow __getattr__ to raise exceptions other than
1418 # AttributeError, which then crashes IPython.
1419 # AttributeError, which then crashes IPython.
1419 break
1420 break
1420 else:
1421 else:
1421 # If we finish the for loop (no break), we got all members
1422 # If we finish the for loop (no break), we got all members
1422 found = True
1423 found = True
1423 ospace = nsname
1424 ospace = nsname
1424 if ns == alias_ns:
1425 if ns == alias_ns:
1425 isalias = True
1426 isalias = True
1426 break # namespace loop
1427 break # namespace loop
1427
1428
1428 # Try to see if it's magic
1429 # Try to see if it's magic
1429 if not found:
1430 if not found:
1430 obj = None
1431 obj = None
1431 if oname.startswith(ESC_MAGIC2):
1432 if oname.startswith(ESC_MAGIC2):
1432 oname = oname.lstrip(ESC_MAGIC2)
1433 oname = oname.lstrip(ESC_MAGIC2)
1433 obj = self.find_cell_magic(oname)
1434 obj = self.find_cell_magic(oname)
1434 elif oname.startswith(ESC_MAGIC):
1435 elif oname.startswith(ESC_MAGIC):
1435 oname = oname.lstrip(ESC_MAGIC)
1436 oname = oname.lstrip(ESC_MAGIC)
1436 obj = self.find_line_magic(oname)
1437 obj = self.find_line_magic(oname)
1437 else:
1438 else:
1438 # search without prefix, so run? will find %run?
1439 # search without prefix, so run? will find %run?
1439 obj = self.find_line_magic(oname)
1440 obj = self.find_line_magic(oname)
1440 if obj is None:
1441 if obj is None:
1441 obj = self.find_cell_magic(oname)
1442 obj = self.find_cell_magic(oname)
1442 if obj is not None:
1443 if obj is not None:
1443 found = True
1444 found = True
1444 ospace = 'IPython internal'
1445 ospace = 'IPython internal'
1445 ismagic = True
1446 ismagic = True
1446
1447
1447 # Last try: special-case some literals like '', [], {}, etc:
1448 # Last try: special-case some literals like '', [], {}, etc:
1448 if not found and oname_head in ["''",'""','[]','{}','()']:
1449 if not found and oname_head in ["''",'""','[]','{}','()']:
1449 obj = eval(oname_head)
1450 obj = eval(oname_head)
1450 found = True
1451 found = True
1451 ospace = 'Interactive'
1452 ospace = 'Interactive'
1452
1453
1453 return {'found':found, 'obj':obj, 'namespace':ospace,
1454 return {'found':found, 'obj':obj, 'namespace':ospace,
1454 'ismagic':ismagic, 'isalias':isalias, 'parent':parent}
1455 'ismagic':ismagic, 'isalias':isalias, 'parent':parent}
1455
1456
1456 def _ofind_property(self, oname, info):
1457 def _ofind_property(self, oname, info):
1457 """Second part of object finding, to look for property details."""
1458 """Second part of object finding, to look for property details."""
1458 if info.found:
1459 if info.found:
1459 # Get the docstring of the class property if it exists.
1460 # Get the docstring of the class property if it exists.
1460 path = oname.split('.')
1461 path = oname.split('.')
1461 root = '.'.join(path[:-1])
1462 root = '.'.join(path[:-1])
1462 if info.parent is not None:
1463 if info.parent is not None:
1463 try:
1464 try:
1464 target = getattr(info.parent, '__class__')
1465 target = getattr(info.parent, '__class__')
1465 # The object belongs to a class instance.
1466 # The object belongs to a class instance.
1466 try:
1467 try:
1467 target = getattr(target, path[-1])
1468 target = getattr(target, path[-1])
1468 # The class defines the object.
1469 # The class defines the object.
1469 if isinstance(target, property):
1470 if isinstance(target, property):
1470 oname = root + '.__class__.' + path[-1]
1471 oname = root + '.__class__.' + path[-1]
1471 info = Struct(self._ofind(oname))
1472 info = Struct(self._ofind(oname))
1472 except AttributeError: pass
1473 except AttributeError: pass
1473 except AttributeError: pass
1474 except AttributeError: pass
1474
1475
1475 # We return either the new info or the unmodified input if the object
1476 # We return either the new info or the unmodified input if the object
1476 # hadn't been found
1477 # hadn't been found
1477 return info
1478 return info
1478
1479
1479 def _object_find(self, oname, namespaces=None):
1480 def _object_find(self, oname, namespaces=None):
1480 """Find an object and return a struct with info about it."""
1481 """Find an object and return a struct with info about it."""
1481 inf = Struct(self._ofind(oname, namespaces))
1482 inf = Struct(self._ofind(oname, namespaces))
1482 return Struct(self._ofind_property(oname, inf))
1483 return Struct(self._ofind_property(oname, inf))
1483
1484
1484 def _inspect(self, meth, oname, namespaces=None, **kw):
1485 def _inspect(self, meth, oname, namespaces=None, **kw):
1485 """Generic interface to the inspector system.
1486 """Generic interface to the inspector system.
1486
1487
1487 This function is meant to be called by pdef, pdoc & friends."""
1488 This function is meant to be called by pdef, pdoc & friends."""
1488 info = self._object_find(oname, namespaces)
1489 info = self._object_find(oname, namespaces)
1489 if info.found:
1490 if info.found:
1490 pmethod = getattr(self.inspector, meth)
1491 pmethod = getattr(self.inspector, meth)
1491 formatter = format_screen if info.ismagic else None
1492 formatter = format_screen if info.ismagic else None
1492 if meth == 'pdoc':
1493 if meth == 'pdoc':
1493 pmethod(info.obj, oname, formatter)
1494 pmethod(info.obj, oname, formatter)
1494 elif meth == 'pinfo':
1495 elif meth == 'pinfo':
1495 pmethod(info.obj, oname, formatter, info, **kw)
1496 pmethod(info.obj, oname, formatter, info, **kw)
1496 else:
1497 else:
1497 pmethod(info.obj, oname)
1498 pmethod(info.obj, oname)
1498 else:
1499 else:
1499 print('Object `%s` not found.' % oname)
1500 print('Object `%s` not found.' % oname)
1500 return 'not found' # so callers can take other action
1501 return 'not found' # so callers can take other action
1501
1502
1502 def object_inspect(self, oname, detail_level=0):
1503 def object_inspect(self, oname, detail_level=0):
1503 with self.builtin_trap:
1504 with self.builtin_trap:
1504 info = self._object_find(oname)
1505 info = self._object_find(oname)
1505 if info.found:
1506 if info.found:
1506 return self.inspector.info(info.obj, oname, info=info,
1507 return self.inspector.info(info.obj, oname, info=info,
1507 detail_level=detail_level
1508 detail_level=detail_level
1508 )
1509 )
1509 else:
1510 else:
1510 return oinspect.object_info(name=oname, found=False)
1511 return oinspect.object_info(name=oname, found=False)
1511
1512
1512 #-------------------------------------------------------------------------
1513 #-------------------------------------------------------------------------
1513 # Things related to history management
1514 # Things related to history management
1514 #-------------------------------------------------------------------------
1515 #-------------------------------------------------------------------------
1515
1516
1516 def init_history(self):
1517 def init_history(self):
1517 """Sets up the command history, and starts regular autosaves."""
1518 """Sets up the command history, and starts regular autosaves."""
1518 self.history_manager = HistoryManager(shell=self, config=self.config)
1519 self.history_manager = HistoryManager(shell=self, config=self.config)
1519 self.configurables.append(self.history_manager)
1520 self.configurables.append(self.history_manager)
1520
1521
1521 #-------------------------------------------------------------------------
1522 #-------------------------------------------------------------------------
1522 # Things related to exception handling and tracebacks (not debugging)
1523 # Things related to exception handling and tracebacks (not debugging)
1523 #-------------------------------------------------------------------------
1524 #-------------------------------------------------------------------------
1524
1525
1525 def init_traceback_handlers(self, custom_exceptions):
1526 def init_traceback_handlers(self, custom_exceptions):
1526 # Syntax error handler.
1527 # Syntax error handler.
1527 self.SyntaxTB = ultratb.SyntaxTB(color_scheme='NoColor')
1528 self.SyntaxTB = ultratb.SyntaxTB(color_scheme='NoColor')
1528
1529
1529 # The interactive one is initialized with an offset, meaning we always
1530 # The interactive one is initialized with an offset, meaning we always
1530 # want to remove the topmost item in the traceback, which is our own
1531 # want to remove the topmost item in the traceback, which is our own
1531 # internal code. Valid modes: ['Plain','Context','Verbose']
1532 # internal code. Valid modes: ['Plain','Context','Verbose']
1532 self.InteractiveTB = ultratb.AutoFormattedTB(mode = 'Plain',
1533 self.InteractiveTB = ultratb.AutoFormattedTB(mode = 'Plain',
1533 color_scheme='NoColor',
1534 color_scheme='NoColor',
1534 tb_offset = 1,
1535 tb_offset = 1,
1535 check_cache=self.compile.check_cache)
1536 check_cache=self.compile.check_cache)
1536
1537
1537 # The instance will store a pointer to the system-wide exception hook,
1538 # The instance will store a pointer to the system-wide exception hook,
1538 # so that runtime code (such as magics) can access it. This is because
1539 # so that runtime code (such as magics) can access it. This is because
1539 # during the read-eval loop, it may get temporarily overwritten.
1540 # during the read-eval loop, it may get temporarily overwritten.
1540 self.sys_excepthook = sys.excepthook
1541 self.sys_excepthook = sys.excepthook
1541
1542
1542 # and add any custom exception handlers the user may have specified
1543 # and add any custom exception handlers the user may have specified
1543 self.set_custom_exc(*custom_exceptions)
1544 self.set_custom_exc(*custom_exceptions)
1544
1545
1545 # Set the exception mode
1546 # Set the exception mode
1546 self.InteractiveTB.set_mode(mode=self.xmode)
1547 self.InteractiveTB.set_mode(mode=self.xmode)
1547
1548
1548 def set_custom_exc(self, exc_tuple, handler):
1549 def set_custom_exc(self, exc_tuple, handler):
1549 """set_custom_exc(exc_tuple,handler)
1550 """set_custom_exc(exc_tuple,handler)
1550
1551
1551 Set a custom exception handler, which will be called if any of the
1552 Set a custom exception handler, which will be called if any of the
1552 exceptions in exc_tuple occur in the mainloop (specifically, in the
1553 exceptions in exc_tuple occur in the mainloop (specifically, in the
1553 run_code() method).
1554 run_code() method).
1554
1555
1555 Parameters
1556 Parameters
1556 ----------
1557 ----------
1557
1558
1558 exc_tuple : tuple of exception classes
1559 exc_tuple : tuple of exception classes
1559 A *tuple* of exception classes, for which to call the defined
1560 A *tuple* of exception classes, for which to call the defined
1560 handler. It is very important that you use a tuple, and NOT A
1561 handler. It is very important that you use a tuple, and NOT A
1561 LIST here, because of the way Python's except statement works. If
1562 LIST here, because of the way Python's except statement works. If
1562 you only want to trap a single exception, use a singleton tuple::
1563 you only want to trap a single exception, use a singleton tuple::
1563
1564
1564 exc_tuple == (MyCustomException,)
1565 exc_tuple == (MyCustomException,)
1565
1566
1566 handler : callable
1567 handler : callable
1567 handler must have the following signature::
1568 handler must have the following signature::
1568
1569
1569 def my_handler(self, etype, value, tb, tb_offset=None):
1570 def my_handler(self, etype, value, tb, tb_offset=None):
1570 ...
1571 ...
1571 return structured_traceback
1572 return structured_traceback
1572
1573
1573 Your handler must return a structured traceback (a list of strings),
1574 Your handler must return a structured traceback (a list of strings),
1574 or None.
1575 or None.
1575
1576
1576 This will be made into an instance method (via types.MethodType)
1577 This will be made into an instance method (via types.MethodType)
1577 of IPython itself, and it will be called if any of the exceptions
1578 of IPython itself, and it will be called if any of the exceptions
1578 listed in the exc_tuple are caught. If the handler is None, an
1579 listed in the exc_tuple are caught. If the handler is None, an
1579 internal basic one is used, which just prints basic info.
1580 internal basic one is used, which just prints basic info.
1580
1581
1581 To protect IPython from crashes, if your handler ever raises an
1582 To protect IPython from crashes, if your handler ever raises an
1582 exception or returns an invalid result, it will be immediately
1583 exception or returns an invalid result, it will be immediately
1583 disabled.
1584 disabled.
1584
1585
1585 WARNING: by putting in your own exception handler into IPython's main
1586 WARNING: by putting in your own exception handler into IPython's main
1586 execution loop, you run a very good chance of nasty crashes. This
1587 execution loop, you run a very good chance of nasty crashes. This
1587 facility should only be used if you really know what you are doing."""
1588 facility should only be used if you really know what you are doing."""
1588
1589
1589 assert type(exc_tuple)==type(()) , \
1590 assert type(exc_tuple)==type(()) , \
1590 "The custom exceptions must be given AS A TUPLE."
1591 "The custom exceptions must be given AS A TUPLE."
1591
1592
1592 def dummy_handler(self,etype,value,tb,tb_offset=None):
1593 def dummy_handler(self,etype,value,tb,tb_offset=None):
1593 print('*** Simple custom exception handler ***')
1594 print('*** Simple custom exception handler ***')
1594 print('Exception type :',etype)
1595 print('Exception type :',etype)
1595 print('Exception value:',value)
1596 print('Exception value:',value)
1596 print('Traceback :',tb)
1597 print('Traceback :',tb)
1597 #print 'Source code :','\n'.join(self.buffer)
1598 #print 'Source code :','\n'.join(self.buffer)
1598
1599
1599 def validate_stb(stb):
1600 def validate_stb(stb):
1600 """validate structured traceback return type
1601 """validate structured traceback return type
1601
1602
1602 return type of CustomTB *should* be a list of strings, but allow
1603 return type of CustomTB *should* be a list of strings, but allow
1603 single strings or None, which are harmless.
1604 single strings or None, which are harmless.
1604
1605
1605 This function will *always* return a list of strings,
1606 This function will *always* return a list of strings,
1606 and will raise a TypeError if stb is inappropriate.
1607 and will raise a TypeError if stb is inappropriate.
1607 """
1608 """
1608 msg = "CustomTB must return list of strings, not %r" % stb
1609 msg = "CustomTB must return list of strings, not %r" % stb
1609 if stb is None:
1610 if stb is None:
1610 return []
1611 return []
1611 elif isinstance(stb, basestring):
1612 elif isinstance(stb, basestring):
1612 return [stb]
1613 return [stb]
1613 elif not isinstance(stb, list):
1614 elif not isinstance(stb, list):
1614 raise TypeError(msg)
1615 raise TypeError(msg)
1615 # it's a list
1616 # it's a list
1616 for line in stb:
1617 for line in stb:
1617 # check every element
1618 # check every element
1618 if not isinstance(line, basestring):
1619 if not isinstance(line, basestring):
1619 raise TypeError(msg)
1620 raise TypeError(msg)
1620 return stb
1621 return stb
1621
1622
1622 if handler is None:
1623 if handler is None:
1623 wrapped = dummy_handler
1624 wrapped = dummy_handler
1624 else:
1625 else:
1625 def wrapped(self,etype,value,tb,tb_offset=None):
1626 def wrapped(self,etype,value,tb,tb_offset=None):
1626 """wrap CustomTB handler, to protect IPython from user code
1627 """wrap CustomTB handler, to protect IPython from user code
1627
1628
1628 This makes it harder (but not impossible) for custom exception
1629 This makes it harder (but not impossible) for custom exception
1629 handlers to crash IPython.
1630 handlers to crash IPython.
1630 """
1631 """
1631 try:
1632 try:
1632 stb = handler(self,etype,value,tb,tb_offset=tb_offset)
1633 stb = handler(self,etype,value,tb,tb_offset=tb_offset)
1633 return validate_stb(stb)
1634 return validate_stb(stb)
1634 except:
1635 except:
1635 # clear custom handler immediately
1636 # clear custom handler immediately
1636 self.set_custom_exc((), None)
1637 self.set_custom_exc((), None)
1637 print("Custom TB Handler failed, unregistering", file=io.stderr)
1638 print("Custom TB Handler failed, unregistering", file=io.stderr)
1638 # show the exception in handler first
1639 # show the exception in handler first
1639 stb = self.InteractiveTB.structured_traceback(*sys.exc_info())
1640 stb = self.InteractiveTB.structured_traceback(*sys.exc_info())
1640 print(self.InteractiveTB.stb2text(stb), file=io.stdout)
1641 print(self.InteractiveTB.stb2text(stb), file=io.stdout)
1641 print("The original exception:", file=io.stdout)
1642 print("The original exception:", file=io.stdout)
1642 stb = self.InteractiveTB.structured_traceback(
1643 stb = self.InteractiveTB.structured_traceback(
1643 (etype,value,tb), tb_offset=tb_offset
1644 (etype,value,tb), tb_offset=tb_offset
1644 )
1645 )
1645 return stb
1646 return stb
1646
1647
1647 self.CustomTB = types.MethodType(wrapped,self)
1648 self.CustomTB = types.MethodType(wrapped,self)
1648 self.custom_exceptions = exc_tuple
1649 self.custom_exceptions = exc_tuple
1649
1650
1650 def excepthook(self, etype, value, tb):
1651 def excepthook(self, etype, value, tb):
1651 """One more defense for GUI apps that call sys.excepthook.
1652 """One more defense for GUI apps that call sys.excepthook.
1652
1653
1653 GUI frameworks like wxPython trap exceptions and call
1654 GUI frameworks like wxPython trap exceptions and call
1654 sys.excepthook themselves. I guess this is a feature that
1655 sys.excepthook themselves. I guess this is a feature that
1655 enables them to keep running after exceptions that would
1656 enables them to keep running after exceptions that would
1656 otherwise kill their mainloop. This is a bother for IPython
1657 otherwise kill their mainloop. This is a bother for IPython
1657 which excepts to catch all of the program exceptions with a try:
1658 which excepts to catch all of the program exceptions with a try:
1658 except: statement.
1659 except: statement.
1659
1660
1660 Normally, IPython sets sys.excepthook to a CrashHandler instance, so if
1661 Normally, IPython sets sys.excepthook to a CrashHandler instance, so if
1661 any app directly invokes sys.excepthook, it will look to the user like
1662 any app directly invokes sys.excepthook, it will look to the user like
1662 IPython crashed. In order to work around this, we can disable the
1663 IPython crashed. In order to work around this, we can disable the
1663 CrashHandler and replace it with this excepthook instead, which prints a
1664 CrashHandler and replace it with this excepthook instead, which prints a
1664 regular traceback using our InteractiveTB. In this fashion, apps which
1665 regular traceback using our InteractiveTB. In this fashion, apps which
1665 call sys.excepthook will generate a regular-looking exception from
1666 call sys.excepthook will generate a regular-looking exception from
1666 IPython, and the CrashHandler will only be triggered by real IPython
1667 IPython, and the CrashHandler will only be triggered by real IPython
1667 crashes.
1668 crashes.
1668
1669
1669 This hook should be used sparingly, only in places which are not likely
1670 This hook should be used sparingly, only in places which are not likely
1670 to be true IPython errors.
1671 to be true IPython errors.
1671 """
1672 """
1672 self.showtraceback((etype,value,tb),tb_offset=0)
1673 self.showtraceback((etype,value,tb),tb_offset=0)
1673
1674
1674 def _get_exc_info(self, exc_tuple=None):
1675 def _get_exc_info(self, exc_tuple=None):
1675 """get exc_info from a given tuple, sys.exc_info() or sys.last_type etc.
1676 """get exc_info from a given tuple, sys.exc_info() or sys.last_type etc.
1676
1677
1677 Ensures sys.last_type,value,traceback hold the exc_info we found,
1678 Ensures sys.last_type,value,traceback hold the exc_info we found,
1678 from whichever source.
1679 from whichever source.
1679
1680
1680 raises ValueError if none of these contain any information
1681 raises ValueError if none of these contain any information
1681 """
1682 """
1682 if exc_tuple is None:
1683 if exc_tuple is None:
1683 etype, value, tb = sys.exc_info()
1684 etype, value, tb = sys.exc_info()
1684 else:
1685 else:
1685 etype, value, tb = exc_tuple
1686 etype, value, tb = exc_tuple
1686
1687
1687 if etype is None:
1688 if etype is None:
1688 if hasattr(sys, 'last_type'):
1689 if hasattr(sys, 'last_type'):
1689 etype, value, tb = sys.last_type, sys.last_value, \
1690 etype, value, tb = sys.last_type, sys.last_value, \
1690 sys.last_traceback
1691 sys.last_traceback
1691
1692
1692 if etype is None:
1693 if etype is None:
1693 raise ValueError("No exception to find")
1694 raise ValueError("No exception to find")
1694
1695
1695 # Now store the exception info in sys.last_type etc.
1696 # Now store the exception info in sys.last_type etc.
1696 # WARNING: these variables are somewhat deprecated and not
1697 # WARNING: these variables are somewhat deprecated and not
1697 # necessarily safe to use in a threaded environment, but tools
1698 # necessarily safe to use in a threaded environment, but tools
1698 # like pdb depend on their existence, so let's set them. If we
1699 # like pdb depend on their existence, so let's set them. If we
1699 # find problems in the field, we'll need to revisit their use.
1700 # find problems in the field, we'll need to revisit their use.
1700 sys.last_type = etype
1701 sys.last_type = etype
1701 sys.last_value = value
1702 sys.last_value = value
1702 sys.last_traceback = tb
1703 sys.last_traceback = tb
1703
1704
1704 return etype, value, tb
1705 return etype, value, tb
1705
1706
1706
1707
1707 def showtraceback(self,exc_tuple = None,filename=None,tb_offset=None,
1708 def showtraceback(self,exc_tuple = None,filename=None,tb_offset=None,
1708 exception_only=False):
1709 exception_only=False):
1709 """Display the exception that just occurred.
1710 """Display the exception that just occurred.
1710
1711
1711 If nothing is known about the exception, this is the method which
1712 If nothing is known about the exception, this is the method which
1712 should be used throughout the code for presenting user tracebacks,
1713 should be used throughout the code for presenting user tracebacks,
1713 rather than directly invoking the InteractiveTB object.
1714 rather than directly invoking the InteractiveTB object.
1714
1715
1715 A specific showsyntaxerror() also exists, but this method can take
1716 A specific showsyntaxerror() also exists, but this method can take
1716 care of calling it if needed, so unless you are explicitly catching a
1717 care of calling it if needed, so unless you are explicitly catching a
1717 SyntaxError exception, don't try to analyze the stack manually and
1718 SyntaxError exception, don't try to analyze the stack manually and
1718 simply call this method."""
1719 simply call this method."""
1719
1720
1720 try:
1721 try:
1721 try:
1722 try:
1722 etype, value, tb = self._get_exc_info(exc_tuple)
1723 etype, value, tb = self._get_exc_info(exc_tuple)
1723 except ValueError:
1724 except ValueError:
1724 self.write_err('No traceback available to show.\n')
1725 self.write_err('No traceback available to show.\n')
1725 return
1726 return
1726
1727
1727 if issubclass(etype, SyntaxError):
1728 if issubclass(etype, SyntaxError):
1728 # Though this won't be called by syntax errors in the input
1729 # Though this won't be called by syntax errors in the input
1729 # line, there may be SyntaxError cases with imported code.
1730 # line, there may be SyntaxError cases with imported code.
1730 self.showsyntaxerror(filename)
1731 self.showsyntaxerror(filename)
1731 elif etype is UsageError:
1732 elif etype is UsageError:
1732 self.write_err("UsageError: %s" % value)
1733 self.write_err("UsageError: %s" % value)
1733 else:
1734 else:
1734 if exception_only:
1735 if exception_only:
1735 stb = ['An exception has occurred, use %tb to see '
1736 stb = ['An exception has occurred, use %tb to see '
1736 'the full traceback.\n']
1737 'the full traceback.\n']
1737 stb.extend(self.InteractiveTB.get_exception_only(etype,
1738 stb.extend(self.InteractiveTB.get_exception_only(etype,
1738 value))
1739 value))
1739 else:
1740 else:
1740 try:
1741 try:
1741 # Exception classes can customise their traceback - we
1742 # Exception classes can customise their traceback - we
1742 # use this in IPython.parallel for exceptions occurring
1743 # use this in IPython.parallel for exceptions occurring
1743 # in the engines. This should return a list of strings.
1744 # in the engines. This should return a list of strings.
1744 stb = value._render_traceback_()
1745 stb = value._render_traceback_()
1745 except Exception:
1746 except Exception:
1746 stb = self.InteractiveTB.structured_traceback(etype,
1747 stb = self.InteractiveTB.structured_traceback(etype,
1747 value, tb, tb_offset=tb_offset)
1748 value, tb, tb_offset=tb_offset)
1748
1749
1749 self._showtraceback(etype, value, stb)
1750 self._showtraceback(etype, value, stb)
1750 if self.call_pdb:
1751 if self.call_pdb:
1751 # drop into debugger
1752 # drop into debugger
1752 self.debugger(force=True)
1753 self.debugger(force=True)
1753 return
1754 return
1754
1755
1755 # Actually show the traceback
1756 # Actually show the traceback
1756 self._showtraceback(etype, value, stb)
1757 self._showtraceback(etype, value, stb)
1757
1758
1758 except KeyboardInterrupt:
1759 except KeyboardInterrupt:
1759 self.write_err("\nKeyboardInterrupt\n")
1760 self.write_err("\nKeyboardInterrupt\n")
1760
1761
1761 def _showtraceback(self, etype, evalue, stb):
1762 def _showtraceback(self, etype, evalue, stb):
1762 """Actually show a traceback.
1763 """Actually show a traceback.
1763
1764
1764 Subclasses may override this method to put the traceback on a different
1765 Subclasses may override this method to put the traceback on a different
1765 place, like a side channel.
1766 place, like a side channel.
1766 """
1767 """
1767 print(self.InteractiveTB.stb2text(stb), file=io.stdout)
1768 print(self.InteractiveTB.stb2text(stb), file=io.stdout)
1768
1769
1769 def showsyntaxerror(self, filename=None):
1770 def showsyntaxerror(self, filename=None):
1770 """Display the syntax error that just occurred.
1771 """Display the syntax error that just occurred.
1771
1772
1772 This doesn't display a stack trace because there isn't one.
1773 This doesn't display a stack trace because there isn't one.
1773
1774
1774 If a filename is given, it is stuffed in the exception instead
1775 If a filename is given, it is stuffed in the exception instead
1775 of what was there before (because Python's parser always uses
1776 of what was there before (because Python's parser always uses
1776 "<string>" when reading from a string).
1777 "<string>" when reading from a string).
1777 """
1778 """
1778 etype, value, last_traceback = self._get_exc_info()
1779 etype, value, last_traceback = self._get_exc_info()
1779
1780
1780 if filename and issubclass(etype, SyntaxError):
1781 if filename and issubclass(etype, SyntaxError):
1781 try:
1782 try:
1782 value.filename = filename
1783 value.filename = filename
1783 except:
1784 except:
1784 # Not the format we expect; leave it alone
1785 # Not the format we expect; leave it alone
1785 pass
1786 pass
1786
1787
1787 stb = self.SyntaxTB.structured_traceback(etype, value, [])
1788 stb = self.SyntaxTB.structured_traceback(etype, value, [])
1788 self._showtraceback(etype, value, stb)
1789 self._showtraceback(etype, value, stb)
1789
1790
1790 # This is overridden in TerminalInteractiveShell to show a message about
1791 # This is overridden in TerminalInteractiveShell to show a message about
1791 # the %paste magic.
1792 # the %paste magic.
1792 def showindentationerror(self):
1793 def showindentationerror(self):
1793 """Called by run_cell when there's an IndentationError in code entered
1794 """Called by run_cell when there's an IndentationError in code entered
1794 at the prompt.
1795 at the prompt.
1795
1796
1796 This is overridden in TerminalInteractiveShell to show a message about
1797 This is overridden in TerminalInteractiveShell to show a message about
1797 the %paste magic."""
1798 the %paste magic."""
1798 self.showsyntaxerror()
1799 self.showsyntaxerror()
1799
1800
1800 #-------------------------------------------------------------------------
1801 #-------------------------------------------------------------------------
1801 # Things related to readline
1802 # Things related to readline
1802 #-------------------------------------------------------------------------
1803 #-------------------------------------------------------------------------
1803
1804
1804 def init_readline(self):
1805 def init_readline(self):
1805 """Command history completion/saving/reloading."""
1806 """Command history completion/saving/reloading."""
1806
1807
1807 if self.readline_use:
1808 if self.readline_use:
1808 import IPython.utils.rlineimpl as readline
1809 import IPython.utils.rlineimpl as readline
1809
1810
1810 self.rl_next_input = None
1811 self.rl_next_input = None
1811 self.rl_do_indent = False
1812 self.rl_do_indent = False
1812
1813
1813 if not self.readline_use or not readline.have_readline:
1814 if not self.readline_use or not readline.have_readline:
1814 self.has_readline = False
1815 self.has_readline = False
1815 self.readline = None
1816 self.readline = None
1816 # Set a number of methods that depend on readline to be no-op
1817 # Set a number of methods that depend on readline to be no-op
1817 self.readline_no_record = no_op_context
1818 self.readline_no_record = no_op_context
1818 self.set_readline_completer = no_op
1819 self.set_readline_completer = no_op
1819 self.set_custom_completer = no_op
1820 self.set_custom_completer = no_op
1820 if self.readline_use:
1821 if self.readline_use:
1821 warn('Readline services not available or not loaded.')
1822 warn('Readline services not available or not loaded.')
1822 else:
1823 else:
1823 self.has_readline = True
1824 self.has_readline = True
1824 self.readline = readline
1825 self.readline = readline
1825 sys.modules['readline'] = readline
1826 sys.modules['readline'] = readline
1826
1827
1827 # Platform-specific configuration
1828 # Platform-specific configuration
1828 if os.name == 'nt':
1829 if os.name == 'nt':
1829 # FIXME - check with Frederick to see if we can harmonize
1830 # FIXME - check with Frederick to see if we can harmonize
1830 # naming conventions with pyreadline to avoid this
1831 # naming conventions with pyreadline to avoid this
1831 # platform-dependent check
1832 # platform-dependent check
1832 self.readline_startup_hook = readline.set_pre_input_hook
1833 self.readline_startup_hook = readline.set_pre_input_hook
1833 else:
1834 else:
1834 self.readline_startup_hook = readline.set_startup_hook
1835 self.readline_startup_hook = readline.set_startup_hook
1835
1836
1836 # Load user's initrc file (readline config)
1837 # Load user's initrc file (readline config)
1837 # Or if libedit is used, load editrc.
1838 # Or if libedit is used, load editrc.
1838 inputrc_name = os.environ.get('INPUTRC')
1839 inputrc_name = os.environ.get('INPUTRC')
1839 if inputrc_name is None:
1840 if inputrc_name is None:
1840 inputrc_name = '.inputrc'
1841 inputrc_name = '.inputrc'
1841 if readline.uses_libedit:
1842 if readline.uses_libedit:
1842 inputrc_name = '.editrc'
1843 inputrc_name = '.editrc'
1843 inputrc_name = os.path.join(self.home_dir, inputrc_name)
1844 inputrc_name = os.path.join(self.home_dir, inputrc_name)
1844 if os.path.isfile(inputrc_name):
1845 if os.path.isfile(inputrc_name):
1845 try:
1846 try:
1846 readline.read_init_file(inputrc_name)
1847 readline.read_init_file(inputrc_name)
1847 except:
1848 except:
1848 warn('Problems reading readline initialization file <%s>'
1849 warn('Problems reading readline initialization file <%s>'
1849 % inputrc_name)
1850 % inputrc_name)
1850
1851
1851 # Configure readline according to user's prefs
1852 # Configure readline according to user's prefs
1852 # This is only done if GNU readline is being used. If libedit
1853 # This is only done if GNU readline is being used. If libedit
1853 # is being used (as on Leopard) the readline config is
1854 # is being used (as on Leopard) the readline config is
1854 # not run as the syntax for libedit is different.
1855 # not run as the syntax for libedit is different.
1855 if not readline.uses_libedit:
1856 if not readline.uses_libedit:
1856 for rlcommand in self.readline_parse_and_bind:
1857 for rlcommand in self.readline_parse_and_bind:
1857 #print "loading rl:",rlcommand # dbg
1858 #print "loading rl:",rlcommand # dbg
1858 readline.parse_and_bind(rlcommand)
1859 readline.parse_and_bind(rlcommand)
1859
1860
1860 # Remove some chars from the delimiters list. If we encounter
1861 # Remove some chars from the delimiters list. If we encounter
1861 # unicode chars, discard them.
1862 # unicode chars, discard them.
1862 delims = readline.get_completer_delims()
1863 delims = readline.get_completer_delims()
1863 if not py3compat.PY3:
1864 if not py3compat.PY3:
1864 delims = delims.encode("ascii", "ignore")
1865 delims = delims.encode("ascii", "ignore")
1865 for d in self.readline_remove_delims:
1866 for d in self.readline_remove_delims:
1866 delims = delims.replace(d, "")
1867 delims = delims.replace(d, "")
1867 delims = delims.replace(ESC_MAGIC, '')
1868 delims = delims.replace(ESC_MAGIC, '')
1868 readline.set_completer_delims(delims)
1869 readline.set_completer_delims(delims)
1870 # Store these so we can restore them if something like rpy2 modifies
1871 # them.
1872 self.readline_delims = delims
1869 # otherwise we end up with a monster history after a while:
1873 # otherwise we end up with a monster history after a while:
1870 readline.set_history_length(self.history_length)
1874 readline.set_history_length(self.history_length)
1871
1875
1872 self.refill_readline_hist()
1876 self.refill_readline_hist()
1873 self.readline_no_record = ReadlineNoRecord(self)
1877 self.readline_no_record = ReadlineNoRecord(self)
1874
1878
1875 # Configure auto-indent for all platforms
1879 # Configure auto-indent for all platforms
1876 self.set_autoindent(self.autoindent)
1880 self.set_autoindent(self.autoindent)
1877
1881
1878 def refill_readline_hist(self):
1882 def refill_readline_hist(self):
1879 # Load the last 1000 lines from history
1883 # Load the last 1000 lines from history
1880 self.readline.clear_history()
1884 self.readline.clear_history()
1881 stdin_encoding = sys.stdin.encoding or "utf-8"
1885 stdin_encoding = sys.stdin.encoding or "utf-8"
1882 last_cell = u""
1886 last_cell = u""
1883 for _, _, cell in self.history_manager.get_tail(1000,
1887 for _, _, cell in self.history_manager.get_tail(1000,
1884 include_latest=True):
1888 include_latest=True):
1885 # Ignore blank lines and consecutive duplicates
1889 # Ignore blank lines and consecutive duplicates
1886 cell = cell.rstrip()
1890 cell = cell.rstrip()
1887 if cell and (cell != last_cell):
1891 if cell and (cell != last_cell):
1888 if self.multiline_history:
1892 if self.multiline_history:
1889 self.readline.add_history(py3compat.unicode_to_str(cell,
1893 self.readline.add_history(py3compat.unicode_to_str(cell,
1890 stdin_encoding))
1894 stdin_encoding))
1891 else:
1895 else:
1892 for line in cell.splitlines():
1896 for line in cell.splitlines():
1893 self.readline.add_history(py3compat.unicode_to_str(line,
1897 self.readline.add_history(py3compat.unicode_to_str(line,
1894 stdin_encoding))
1898 stdin_encoding))
1895 last_cell = cell
1899 last_cell = cell
1896
1900
1897 def set_next_input(self, s):
1901 def set_next_input(self, s):
1898 """ Sets the 'default' input string for the next command line.
1902 """ Sets the 'default' input string for the next command line.
1899
1903
1900 Requires readline.
1904 Requires readline.
1901
1905
1902 Example:
1906 Example:
1903
1907
1904 [D:\ipython]|1> _ip.set_next_input("Hello Word")
1908 [D:\ipython]|1> _ip.set_next_input("Hello Word")
1905 [D:\ipython]|2> Hello Word_ # cursor is here
1909 [D:\ipython]|2> Hello Word_ # cursor is here
1906 """
1910 """
1907 self.rl_next_input = py3compat.cast_bytes_py2(s)
1911 self.rl_next_input = py3compat.cast_bytes_py2(s)
1908
1912
1909 # Maybe move this to the terminal subclass?
1913 # Maybe move this to the terminal subclass?
1910 def pre_readline(self):
1914 def pre_readline(self):
1911 """readline hook to be used at the start of each line.
1915 """readline hook to be used at the start of each line.
1912
1916
1913 Currently it handles auto-indent only."""
1917 Currently it handles auto-indent only."""
1914
1918
1915 if self.rl_do_indent:
1919 if self.rl_do_indent:
1916 self.readline.insert_text(self._indent_current_str())
1920 self.readline.insert_text(self._indent_current_str())
1917 if self.rl_next_input is not None:
1921 if self.rl_next_input is not None:
1918 self.readline.insert_text(self.rl_next_input)
1922 self.readline.insert_text(self.rl_next_input)
1919 self.rl_next_input = None
1923 self.rl_next_input = None
1920
1924
1921 def _indent_current_str(self):
1925 def _indent_current_str(self):
1922 """return the current level of indentation as a string"""
1926 """return the current level of indentation as a string"""
1923 return self.input_splitter.indent_spaces * ' '
1927 return self.input_splitter.indent_spaces * ' '
1924
1928
1925 #-------------------------------------------------------------------------
1929 #-------------------------------------------------------------------------
1926 # Things related to text completion
1930 # Things related to text completion
1927 #-------------------------------------------------------------------------
1931 #-------------------------------------------------------------------------
1928
1932
1929 def init_completer(self):
1933 def init_completer(self):
1930 """Initialize the completion machinery.
1934 """Initialize the completion machinery.
1931
1935
1932 This creates completion machinery that can be used by client code,
1936 This creates completion machinery that can be used by client code,
1933 either interactively in-process (typically triggered by the readline
1937 either interactively in-process (typically triggered by the readline
1934 library), programatically (such as in test suites) or out-of-prcess
1938 library), programatically (such as in test suites) or out-of-prcess
1935 (typically over the network by remote frontends).
1939 (typically over the network by remote frontends).
1936 """
1940 """
1937 from IPython.core.completer import IPCompleter
1941 from IPython.core.completer import IPCompleter
1938 from IPython.core.completerlib import (module_completer,
1942 from IPython.core.completerlib import (module_completer,
1939 magic_run_completer, cd_completer, reset_completer)
1943 magic_run_completer, cd_completer, reset_completer)
1940
1944
1941 self.Completer = IPCompleter(shell=self,
1945 self.Completer = IPCompleter(shell=self,
1942 namespace=self.user_ns,
1946 namespace=self.user_ns,
1943 global_namespace=self.user_global_ns,
1947 global_namespace=self.user_global_ns,
1944 alias_table=self.alias_manager.alias_table,
1948 alias_table=self.alias_manager.alias_table,
1945 use_readline=self.has_readline,
1949 use_readline=self.has_readline,
1946 config=self.config,
1950 config=self.config,
1947 )
1951 )
1948 self.configurables.append(self.Completer)
1952 self.configurables.append(self.Completer)
1949
1953
1950 # Add custom completers to the basic ones built into IPCompleter
1954 # Add custom completers to the basic ones built into IPCompleter
1951 sdisp = self.strdispatchers.get('complete_command', StrDispatch())
1955 sdisp = self.strdispatchers.get('complete_command', StrDispatch())
1952 self.strdispatchers['complete_command'] = sdisp
1956 self.strdispatchers['complete_command'] = sdisp
1953 self.Completer.custom_completers = sdisp
1957 self.Completer.custom_completers = sdisp
1954
1958
1955 self.set_hook('complete_command', module_completer, str_key = 'import')
1959 self.set_hook('complete_command', module_completer, str_key = 'import')
1956 self.set_hook('complete_command', module_completer, str_key = 'from')
1960 self.set_hook('complete_command', module_completer, str_key = 'from')
1957 self.set_hook('complete_command', magic_run_completer, str_key = '%run')
1961 self.set_hook('complete_command', magic_run_completer, str_key = '%run')
1958 self.set_hook('complete_command', cd_completer, str_key = '%cd')
1962 self.set_hook('complete_command', cd_completer, str_key = '%cd')
1959 self.set_hook('complete_command', reset_completer, str_key = '%reset')
1963 self.set_hook('complete_command', reset_completer, str_key = '%reset')
1960
1964
1961 # Only configure readline if we truly are using readline. IPython can
1965 # Only configure readline if we truly are using readline. IPython can
1962 # do tab-completion over the network, in GUIs, etc, where readline
1966 # do tab-completion over the network, in GUIs, etc, where readline
1963 # itself may be absent
1967 # itself may be absent
1964 if self.has_readline:
1968 if self.has_readline:
1965 self.set_readline_completer()
1969 self.set_readline_completer()
1966
1970
1967 def complete(self, text, line=None, cursor_pos=None):
1971 def complete(self, text, line=None, cursor_pos=None):
1968 """Return the completed text and a list of completions.
1972 """Return the completed text and a list of completions.
1969
1973
1970 Parameters
1974 Parameters
1971 ----------
1975 ----------
1972
1976
1973 text : string
1977 text : string
1974 A string of text to be completed on. It can be given as empty and
1978 A string of text to be completed on. It can be given as empty and
1975 instead a line/position pair are given. In this case, the
1979 instead a line/position pair are given. In this case, the
1976 completer itself will split the line like readline does.
1980 completer itself will split the line like readline does.
1977
1981
1978 line : string, optional
1982 line : string, optional
1979 The complete line that text is part of.
1983 The complete line that text is part of.
1980
1984
1981 cursor_pos : int, optional
1985 cursor_pos : int, optional
1982 The position of the cursor on the input line.
1986 The position of the cursor on the input line.
1983
1987
1984 Returns
1988 Returns
1985 -------
1989 -------
1986 text : string
1990 text : string
1987 The actual text that was completed.
1991 The actual text that was completed.
1988
1992
1989 matches : list
1993 matches : list
1990 A sorted list with all possible completions.
1994 A sorted list with all possible completions.
1991
1995
1992 The optional arguments allow the completion to take more context into
1996 The optional arguments allow the completion to take more context into
1993 account, and are part of the low-level completion API.
1997 account, and are part of the low-level completion API.
1994
1998
1995 This is a wrapper around the completion mechanism, similar to what
1999 This is a wrapper around the completion mechanism, similar to what
1996 readline does at the command line when the TAB key is hit. By
2000 readline does at the command line when the TAB key is hit. By
1997 exposing it as a method, it can be used by other non-readline
2001 exposing it as a method, it can be used by other non-readline
1998 environments (such as GUIs) for text completion.
2002 environments (such as GUIs) for text completion.
1999
2003
2000 Simple usage example:
2004 Simple usage example:
2001
2005
2002 In [1]: x = 'hello'
2006 In [1]: x = 'hello'
2003
2007
2004 In [2]: _ip.complete('x.l')
2008 In [2]: _ip.complete('x.l')
2005 Out[2]: ('x.l', ['x.ljust', 'x.lower', 'x.lstrip'])
2009 Out[2]: ('x.l', ['x.ljust', 'x.lower', 'x.lstrip'])
2006 """
2010 """
2007
2011
2008 # Inject names into __builtin__ so we can complete on the added names.
2012 # Inject names into __builtin__ so we can complete on the added names.
2009 with self.builtin_trap:
2013 with self.builtin_trap:
2010 return self.Completer.complete(text, line, cursor_pos)
2014 return self.Completer.complete(text, line, cursor_pos)
2011
2015
2012 def set_custom_completer(self, completer, pos=0):
2016 def set_custom_completer(self, completer, pos=0):
2013 """Adds a new custom completer function.
2017 """Adds a new custom completer function.
2014
2018
2015 The position argument (defaults to 0) is the index in the completers
2019 The position argument (defaults to 0) is the index in the completers
2016 list where you want the completer to be inserted."""
2020 list where you want the completer to be inserted."""
2017
2021
2018 newcomp = types.MethodType(completer,self.Completer)
2022 newcomp = types.MethodType(completer,self.Completer)
2019 self.Completer.matchers.insert(pos,newcomp)
2023 self.Completer.matchers.insert(pos,newcomp)
2020
2024
2021 def set_readline_completer(self):
2025 def set_readline_completer(self):
2022 """Reset readline's completer to be our own."""
2026 """Reset readline's completer to be our own."""
2023 self.readline.set_completer(self.Completer.rlcomplete)
2027 self.readline.set_completer(self.Completer.rlcomplete)
2024
2028
2025 def set_completer_frame(self, frame=None):
2029 def set_completer_frame(self, frame=None):
2026 """Set the frame of the completer."""
2030 """Set the frame of the completer."""
2027 if frame:
2031 if frame:
2028 self.Completer.namespace = frame.f_locals
2032 self.Completer.namespace = frame.f_locals
2029 self.Completer.global_namespace = frame.f_globals
2033 self.Completer.global_namespace = frame.f_globals
2030 else:
2034 else:
2031 self.Completer.namespace = self.user_ns
2035 self.Completer.namespace = self.user_ns
2032 self.Completer.global_namespace = self.user_global_ns
2036 self.Completer.global_namespace = self.user_global_ns
2033
2037
2034 #-------------------------------------------------------------------------
2038 #-------------------------------------------------------------------------
2035 # Things related to magics
2039 # Things related to magics
2036 #-------------------------------------------------------------------------
2040 #-------------------------------------------------------------------------
2037
2041
2038 def init_magics(self):
2042 def init_magics(self):
2039 from IPython.core import magics as m
2043 from IPython.core import magics as m
2040 self.magics_manager = magic.MagicsManager(shell=self,
2044 self.magics_manager = magic.MagicsManager(shell=self,
2041 confg=self.config,
2045 confg=self.config,
2042 user_magics=m.UserMagics(self))
2046 user_magics=m.UserMagics(self))
2043 self.configurables.append(self.magics_manager)
2047 self.configurables.append(self.magics_manager)
2044
2048
2045 # Expose as public API from the magics manager
2049 # Expose as public API from the magics manager
2046 self.register_magics = self.magics_manager.register
2050 self.register_magics = self.magics_manager.register
2047 self.register_magic_function = self.magics_manager.register_function
2051 self.register_magic_function = self.magics_manager.register_function
2048 self.define_magic = self.magics_manager.define_magic
2052 self.define_magic = self.magics_manager.define_magic
2049
2053
2050 self.register_magics(m.AutoMagics, m.BasicMagics, m.CodeMagics,
2054 self.register_magics(m.AutoMagics, m.BasicMagics, m.CodeMagics,
2051 m.ConfigMagics, m.DeprecatedMagics, m.DisplayMagics, m.ExecutionMagics,
2055 m.ConfigMagics, m.DeprecatedMagics, m.DisplayMagics, m.ExecutionMagics,
2052 m.ExtensionMagics, m.HistoryMagics, m.LoggingMagics,
2056 m.ExtensionMagics, m.HistoryMagics, m.LoggingMagics,
2053 m.NamespaceMagics, m.OSMagics, m.PylabMagics, m.ScriptMagics,
2057 m.NamespaceMagics, m.OSMagics, m.PylabMagics, m.ScriptMagics,
2054 )
2058 )
2055
2059
2056 # Register Magic Aliases
2060 # Register Magic Aliases
2057 mman = self.magics_manager
2061 mman = self.magics_manager
2058 mman.register_alias('ed', 'edit')
2062 mman.register_alias('ed', 'edit')
2059 mman.register_alias('hist', 'history')
2063 mman.register_alias('hist', 'history')
2060 mman.register_alias('rep', 'recall')
2064 mman.register_alias('rep', 'recall')
2061
2065
2062 # FIXME: Move the color initialization to the DisplayHook, which
2066 # FIXME: Move the color initialization to the DisplayHook, which
2063 # should be split into a prompt manager and displayhook. We probably
2067 # should be split into a prompt manager and displayhook. We probably
2064 # even need a centralize colors management object.
2068 # even need a centralize colors management object.
2065 self.magic('colors %s' % self.colors)
2069 self.magic('colors %s' % self.colors)
2066
2070
2067 def run_line_magic(self, magic_name, line):
2071 def run_line_magic(self, magic_name, line):
2068 """Execute the given line magic.
2072 """Execute the given line magic.
2069
2073
2070 Parameters
2074 Parameters
2071 ----------
2075 ----------
2072 magic_name : str
2076 magic_name : str
2073 Name of the desired magic function, without '%' prefix.
2077 Name of the desired magic function, without '%' prefix.
2074
2078
2075 line : str
2079 line : str
2076 The rest of the input line as a single string.
2080 The rest of the input line as a single string.
2077 """
2081 """
2078 fn = self.find_line_magic(magic_name)
2082 fn = self.find_line_magic(magic_name)
2079 if fn is None:
2083 if fn is None:
2080 cm = self.find_cell_magic(magic_name)
2084 cm = self.find_cell_magic(magic_name)
2081 etpl = "Line magic function `%%%s` not found%s."
2085 etpl = "Line magic function `%%%s` not found%s."
2082 extra = '' if cm is None else (' (But cell magic `%%%%%s` exists, '
2086 extra = '' if cm is None else (' (But cell magic `%%%%%s` exists, '
2083 'did you mean that instead?)' % magic_name )
2087 'did you mean that instead?)' % magic_name )
2084 error(etpl % (magic_name, extra))
2088 error(etpl % (magic_name, extra))
2085 else:
2089 else:
2086 # Note: this is the distance in the stack to the user's frame.
2090 # Note: this is the distance in the stack to the user's frame.
2087 # This will need to be updated if the internal calling logic gets
2091 # This will need to be updated if the internal calling logic gets
2088 # refactored, or else we'll be expanding the wrong variables.
2092 # refactored, or else we'll be expanding the wrong variables.
2089 stack_depth = 2
2093 stack_depth = 2
2090 magic_arg_s = self.var_expand(line, stack_depth)
2094 magic_arg_s = self.var_expand(line, stack_depth)
2091 # Put magic args in a list so we can call with f(*a) syntax
2095 # Put magic args in a list so we can call with f(*a) syntax
2092 args = [magic_arg_s]
2096 args = [magic_arg_s]
2093 kwargs = {}
2097 kwargs = {}
2094 # Grab local namespace if we need it:
2098 # Grab local namespace if we need it:
2095 if getattr(fn, "needs_local_scope", False):
2099 if getattr(fn, "needs_local_scope", False):
2096 kwargs['local_ns'] = sys._getframe(stack_depth).f_locals
2100 kwargs['local_ns'] = sys._getframe(stack_depth).f_locals
2097 with self.builtin_trap:
2101 with self.builtin_trap:
2098 result = fn(*args,**kwargs)
2102 result = fn(*args,**kwargs)
2099 return result
2103 return result
2100
2104
2101 def run_cell_magic(self, magic_name, line, cell):
2105 def run_cell_magic(self, magic_name, line, cell):
2102 """Execute the given cell magic.
2106 """Execute the given cell magic.
2103
2107
2104 Parameters
2108 Parameters
2105 ----------
2109 ----------
2106 magic_name : str
2110 magic_name : str
2107 Name of the desired magic function, without '%' prefix.
2111 Name of the desired magic function, without '%' prefix.
2108
2112
2109 line : str
2113 line : str
2110 The rest of the first input line as a single string.
2114 The rest of the first input line as a single string.
2111
2115
2112 cell : str
2116 cell : str
2113 The body of the cell as a (possibly multiline) string.
2117 The body of the cell as a (possibly multiline) string.
2114 """
2118 """
2115 fn = self.find_cell_magic(magic_name)
2119 fn = self.find_cell_magic(magic_name)
2116 if fn is None:
2120 if fn is None:
2117 lm = self.find_line_magic(magic_name)
2121 lm = self.find_line_magic(magic_name)
2118 etpl = "Cell magic function `%%%%%s` not found%s."
2122 etpl = "Cell magic function `%%%%%s` not found%s."
2119 extra = '' if lm is None else (' (But line magic `%%%s` exists, '
2123 extra = '' if lm is None else (' (But line magic `%%%s` exists, '
2120 'did you mean that instead?)' % magic_name )
2124 'did you mean that instead?)' % magic_name )
2121 error(etpl % (magic_name, extra))
2125 error(etpl % (magic_name, extra))
2122 else:
2126 else:
2123 # Note: this is the distance in the stack to the user's frame.
2127 # Note: this is the distance in the stack to the user's frame.
2124 # This will need to be updated if the internal calling logic gets
2128 # This will need to be updated if the internal calling logic gets
2125 # refactored, or else we'll be expanding the wrong variables.
2129 # refactored, or else we'll be expanding the wrong variables.
2126 stack_depth = 2
2130 stack_depth = 2
2127 magic_arg_s = self.var_expand(line, stack_depth)
2131 magic_arg_s = self.var_expand(line, stack_depth)
2128 with self.builtin_trap:
2132 with self.builtin_trap:
2129 result = fn(magic_arg_s, cell)
2133 result = fn(magic_arg_s, cell)
2130 return result
2134 return result
2131
2135
2132 def find_line_magic(self, magic_name):
2136 def find_line_magic(self, magic_name):
2133 """Find and return a line magic by name.
2137 """Find and return a line magic by name.
2134
2138
2135 Returns None if the magic isn't found."""
2139 Returns None if the magic isn't found."""
2136 return self.magics_manager.magics['line'].get(magic_name)
2140 return self.magics_manager.magics['line'].get(magic_name)
2137
2141
2138 def find_cell_magic(self, magic_name):
2142 def find_cell_magic(self, magic_name):
2139 """Find and return a cell magic by name.
2143 """Find and return a cell magic by name.
2140
2144
2141 Returns None if the magic isn't found."""
2145 Returns None if the magic isn't found."""
2142 return self.magics_manager.magics['cell'].get(magic_name)
2146 return self.magics_manager.magics['cell'].get(magic_name)
2143
2147
2144 def find_magic(self, magic_name, magic_kind='line'):
2148 def find_magic(self, magic_name, magic_kind='line'):
2145 """Find and return a magic of the given type by name.
2149 """Find and return a magic of the given type by name.
2146
2150
2147 Returns None if the magic isn't found."""
2151 Returns None if the magic isn't found."""
2148 return self.magics_manager.magics[magic_kind].get(magic_name)
2152 return self.magics_manager.magics[magic_kind].get(magic_name)
2149
2153
2150 def magic(self, arg_s):
2154 def magic(self, arg_s):
2151 """DEPRECATED. Use run_line_magic() instead.
2155 """DEPRECATED. Use run_line_magic() instead.
2152
2156
2153 Call a magic function by name.
2157 Call a magic function by name.
2154
2158
2155 Input: a string containing the name of the magic function to call and
2159 Input: a string containing the name of the magic function to call and
2156 any additional arguments to be passed to the magic.
2160 any additional arguments to be passed to the magic.
2157
2161
2158 magic('name -opt foo bar') is equivalent to typing at the ipython
2162 magic('name -opt foo bar') is equivalent to typing at the ipython
2159 prompt:
2163 prompt:
2160
2164
2161 In[1]: %name -opt foo bar
2165 In[1]: %name -opt foo bar
2162
2166
2163 To call a magic without arguments, simply use magic('name').
2167 To call a magic without arguments, simply use magic('name').
2164
2168
2165 This provides a proper Python function to call IPython's magics in any
2169 This provides a proper Python function to call IPython's magics in any
2166 valid Python code you can type at the interpreter, including loops and
2170 valid Python code you can type at the interpreter, including loops and
2167 compound statements.
2171 compound statements.
2168 """
2172 """
2169 # TODO: should we issue a loud deprecation warning here?
2173 # TODO: should we issue a loud deprecation warning here?
2170 magic_name, _, magic_arg_s = arg_s.partition(' ')
2174 magic_name, _, magic_arg_s = arg_s.partition(' ')
2171 magic_name = magic_name.lstrip(prefilter.ESC_MAGIC)
2175 magic_name = magic_name.lstrip(prefilter.ESC_MAGIC)
2172 return self.run_line_magic(magic_name, magic_arg_s)
2176 return self.run_line_magic(magic_name, magic_arg_s)
2173
2177
2174 #-------------------------------------------------------------------------
2178 #-------------------------------------------------------------------------
2175 # Things related to macros
2179 # Things related to macros
2176 #-------------------------------------------------------------------------
2180 #-------------------------------------------------------------------------
2177
2181
2178 def define_macro(self, name, themacro):
2182 def define_macro(self, name, themacro):
2179 """Define a new macro
2183 """Define a new macro
2180
2184
2181 Parameters
2185 Parameters
2182 ----------
2186 ----------
2183 name : str
2187 name : str
2184 The name of the macro.
2188 The name of the macro.
2185 themacro : str or Macro
2189 themacro : str or Macro
2186 The action to do upon invoking the macro. If a string, a new
2190 The action to do upon invoking the macro. If a string, a new
2187 Macro object is created by passing the string to it.
2191 Macro object is created by passing the string to it.
2188 """
2192 """
2189
2193
2190 from IPython.core import macro
2194 from IPython.core import macro
2191
2195
2192 if isinstance(themacro, basestring):
2196 if isinstance(themacro, basestring):
2193 themacro = macro.Macro(themacro)
2197 themacro = macro.Macro(themacro)
2194 if not isinstance(themacro, macro.Macro):
2198 if not isinstance(themacro, macro.Macro):
2195 raise ValueError('A macro must be a string or a Macro instance.')
2199 raise ValueError('A macro must be a string or a Macro instance.')
2196 self.user_ns[name] = themacro
2200 self.user_ns[name] = themacro
2197
2201
2198 #-------------------------------------------------------------------------
2202 #-------------------------------------------------------------------------
2199 # Things related to the running of system commands
2203 # Things related to the running of system commands
2200 #-------------------------------------------------------------------------
2204 #-------------------------------------------------------------------------
2201
2205
2202 def system_piped(self, cmd):
2206 def system_piped(self, cmd):
2203 """Call the given cmd in a subprocess, piping stdout/err
2207 """Call the given cmd in a subprocess, piping stdout/err
2204
2208
2205 Parameters
2209 Parameters
2206 ----------
2210 ----------
2207 cmd : str
2211 cmd : str
2208 Command to execute (can not end in '&', as background processes are
2212 Command to execute (can not end in '&', as background processes are
2209 not supported. Should not be a command that expects input
2213 not supported. Should not be a command that expects input
2210 other than simple text.
2214 other than simple text.
2211 """
2215 """
2212 if cmd.rstrip().endswith('&'):
2216 if cmd.rstrip().endswith('&'):
2213 # this is *far* from a rigorous test
2217 # this is *far* from a rigorous test
2214 # We do not support backgrounding processes because we either use
2218 # We do not support backgrounding processes because we either use
2215 # pexpect or pipes to read from. Users can always just call
2219 # pexpect or pipes to read from. Users can always just call
2216 # os.system() or use ip.system=ip.system_raw
2220 # os.system() or use ip.system=ip.system_raw
2217 # if they really want a background process.
2221 # if they really want a background process.
2218 raise OSError("Background processes not supported.")
2222 raise OSError("Background processes not supported.")
2219
2223
2220 # we explicitly do NOT return the subprocess status code, because
2224 # we explicitly do NOT return the subprocess status code, because
2221 # a non-None value would trigger :func:`sys.displayhook` calls.
2225 # a non-None value would trigger :func:`sys.displayhook` calls.
2222 # Instead, we store the exit_code in user_ns.
2226 # Instead, we store the exit_code in user_ns.
2223 self.user_ns['_exit_code'] = system(self.var_expand(cmd, depth=1))
2227 self.user_ns['_exit_code'] = system(self.var_expand(cmd, depth=1))
2224
2228
2225 def system_raw(self, cmd):
2229 def system_raw(self, cmd):
2226 """Call the given cmd in a subprocess using os.system
2230 """Call the given cmd in a subprocess using os.system
2227
2231
2228 Parameters
2232 Parameters
2229 ----------
2233 ----------
2230 cmd : str
2234 cmd : str
2231 Command to execute.
2235 Command to execute.
2232 """
2236 """
2233 cmd = self.var_expand(cmd, depth=1)
2237 cmd = self.var_expand(cmd, depth=1)
2234 # protect os.system from UNC paths on Windows, which it can't handle:
2238 # protect os.system from UNC paths on Windows, which it can't handle:
2235 if sys.platform == 'win32':
2239 if sys.platform == 'win32':
2236 from IPython.utils._process_win32 import AvoidUNCPath
2240 from IPython.utils._process_win32 import AvoidUNCPath
2237 with AvoidUNCPath() as path:
2241 with AvoidUNCPath() as path:
2238 if path is not None:
2242 if path is not None:
2239 cmd = '"pushd %s &&"%s' % (path, cmd)
2243 cmd = '"pushd %s &&"%s' % (path, cmd)
2240 cmd = py3compat.unicode_to_str(cmd)
2244 cmd = py3compat.unicode_to_str(cmd)
2241 ec = os.system(cmd)
2245 ec = os.system(cmd)
2242 else:
2246 else:
2243 cmd = py3compat.unicode_to_str(cmd)
2247 cmd = py3compat.unicode_to_str(cmd)
2244 ec = os.system(cmd)
2248 ec = os.system(cmd)
2245
2249
2246 # We explicitly do NOT return the subprocess status code, because
2250 # We explicitly do NOT return the subprocess status code, because
2247 # a non-None value would trigger :func:`sys.displayhook` calls.
2251 # a non-None value would trigger :func:`sys.displayhook` calls.
2248 # Instead, we store the exit_code in user_ns.
2252 # Instead, we store the exit_code in user_ns.
2249 self.user_ns['_exit_code'] = ec
2253 self.user_ns['_exit_code'] = ec
2250
2254
2251 # use piped system by default, because it is better behaved
2255 # use piped system by default, because it is better behaved
2252 system = system_piped
2256 system = system_piped
2253
2257
2254 def getoutput(self, cmd, split=True, depth=0):
2258 def getoutput(self, cmd, split=True, depth=0):
2255 """Get output (possibly including stderr) from a subprocess.
2259 """Get output (possibly including stderr) from a subprocess.
2256
2260
2257 Parameters
2261 Parameters
2258 ----------
2262 ----------
2259 cmd : str
2263 cmd : str
2260 Command to execute (can not end in '&', as background processes are
2264 Command to execute (can not end in '&', as background processes are
2261 not supported.
2265 not supported.
2262 split : bool, optional
2266 split : bool, optional
2263 If True, split the output into an IPython SList. Otherwise, an
2267 If True, split the output into an IPython SList. Otherwise, an
2264 IPython LSString is returned. These are objects similar to normal
2268 IPython LSString is returned. These are objects similar to normal
2265 lists and strings, with a few convenience attributes for easier
2269 lists and strings, with a few convenience attributes for easier
2266 manipulation of line-based output. You can use '?' on them for
2270 manipulation of line-based output. You can use '?' on them for
2267 details.
2271 details.
2268 depth : int, optional
2272 depth : int, optional
2269 How many frames above the caller are the local variables which should
2273 How many frames above the caller are the local variables which should
2270 be expanded in the command string? The default (0) assumes that the
2274 be expanded in the command string? The default (0) assumes that the
2271 expansion variables are in the stack frame calling this function.
2275 expansion variables are in the stack frame calling this function.
2272 """
2276 """
2273 if cmd.rstrip().endswith('&'):
2277 if cmd.rstrip().endswith('&'):
2274 # this is *far* from a rigorous test
2278 # this is *far* from a rigorous test
2275 raise OSError("Background processes not supported.")
2279 raise OSError("Background processes not supported.")
2276 out = getoutput(self.var_expand(cmd, depth=depth+1))
2280 out = getoutput(self.var_expand(cmd, depth=depth+1))
2277 if split:
2281 if split:
2278 out = SList(out.splitlines())
2282 out = SList(out.splitlines())
2279 else:
2283 else:
2280 out = LSString(out)
2284 out = LSString(out)
2281 return out
2285 return out
2282
2286
2283 #-------------------------------------------------------------------------
2287 #-------------------------------------------------------------------------
2284 # Things related to aliases
2288 # Things related to aliases
2285 #-------------------------------------------------------------------------
2289 #-------------------------------------------------------------------------
2286
2290
2287 def init_alias(self):
2291 def init_alias(self):
2288 self.alias_manager = AliasManager(shell=self, config=self.config)
2292 self.alias_manager = AliasManager(shell=self, config=self.config)
2289 self.configurables.append(self.alias_manager)
2293 self.configurables.append(self.alias_manager)
2290 self.ns_table['alias'] = self.alias_manager.alias_table,
2294 self.ns_table['alias'] = self.alias_manager.alias_table,
2291
2295
2292 #-------------------------------------------------------------------------
2296 #-------------------------------------------------------------------------
2293 # Things related to extensions
2297 # Things related to extensions
2294 #-------------------------------------------------------------------------
2298 #-------------------------------------------------------------------------
2295
2299
2296 def init_extension_manager(self):
2300 def init_extension_manager(self):
2297 self.extension_manager = ExtensionManager(shell=self, config=self.config)
2301 self.extension_manager = ExtensionManager(shell=self, config=self.config)
2298 self.configurables.append(self.extension_manager)
2302 self.configurables.append(self.extension_manager)
2299
2303
2300 #-------------------------------------------------------------------------
2304 #-------------------------------------------------------------------------
2301 # Things related to payloads
2305 # Things related to payloads
2302 #-------------------------------------------------------------------------
2306 #-------------------------------------------------------------------------
2303
2307
2304 def init_payload(self):
2308 def init_payload(self):
2305 self.payload_manager = PayloadManager(config=self.config)
2309 self.payload_manager = PayloadManager(config=self.config)
2306 self.configurables.append(self.payload_manager)
2310 self.configurables.append(self.payload_manager)
2307
2311
2308 #-------------------------------------------------------------------------
2312 #-------------------------------------------------------------------------
2309 # Things related to the prefilter
2313 # Things related to the prefilter
2310 #-------------------------------------------------------------------------
2314 #-------------------------------------------------------------------------
2311
2315
2312 def init_prefilter(self):
2316 def init_prefilter(self):
2313 self.prefilter_manager = PrefilterManager(shell=self, config=self.config)
2317 self.prefilter_manager = PrefilterManager(shell=self, config=self.config)
2314 self.configurables.append(self.prefilter_manager)
2318 self.configurables.append(self.prefilter_manager)
2315 # Ultimately this will be refactored in the new interpreter code, but
2319 # Ultimately this will be refactored in the new interpreter code, but
2316 # for now, we should expose the main prefilter method (there's legacy
2320 # for now, we should expose the main prefilter method (there's legacy
2317 # code out there that may rely on this).
2321 # code out there that may rely on this).
2318 self.prefilter = self.prefilter_manager.prefilter_lines
2322 self.prefilter = self.prefilter_manager.prefilter_lines
2319
2323
2320 def auto_rewrite_input(self, cmd):
2324 def auto_rewrite_input(self, cmd):
2321 """Print to the screen the rewritten form of the user's command.
2325 """Print to the screen the rewritten form of the user's command.
2322
2326
2323 This shows visual feedback by rewriting input lines that cause
2327 This shows visual feedback by rewriting input lines that cause
2324 automatic calling to kick in, like::
2328 automatic calling to kick in, like::
2325
2329
2326 /f x
2330 /f x
2327
2331
2328 into::
2332 into::
2329
2333
2330 ------> f(x)
2334 ------> f(x)
2331
2335
2332 after the user's input prompt. This helps the user understand that the
2336 after the user's input prompt. This helps the user understand that the
2333 input line was transformed automatically by IPython.
2337 input line was transformed automatically by IPython.
2334 """
2338 """
2335 if not self.show_rewritten_input:
2339 if not self.show_rewritten_input:
2336 return
2340 return
2337
2341
2338 rw = self.prompt_manager.render('rewrite') + cmd
2342 rw = self.prompt_manager.render('rewrite') + cmd
2339
2343
2340 try:
2344 try:
2341 # plain ascii works better w/ pyreadline, on some machines, so
2345 # plain ascii works better w/ pyreadline, on some machines, so
2342 # we use it and only print uncolored rewrite if we have unicode
2346 # we use it and only print uncolored rewrite if we have unicode
2343 rw = str(rw)
2347 rw = str(rw)
2344 print(rw, file=io.stdout)
2348 print(rw, file=io.stdout)
2345 except UnicodeEncodeError:
2349 except UnicodeEncodeError:
2346 print("------> " + cmd)
2350 print("------> " + cmd)
2347
2351
2348 #-------------------------------------------------------------------------
2352 #-------------------------------------------------------------------------
2349 # Things related to extracting values/expressions from kernel and user_ns
2353 # Things related to extracting values/expressions from kernel and user_ns
2350 #-------------------------------------------------------------------------
2354 #-------------------------------------------------------------------------
2351
2355
2352 def _simple_error(self):
2356 def _simple_error(self):
2353 etype, value = sys.exc_info()[:2]
2357 etype, value = sys.exc_info()[:2]
2354 return u'[ERROR] {e.__name__}: {v}'.format(e=etype, v=value)
2358 return u'[ERROR] {e.__name__}: {v}'.format(e=etype, v=value)
2355
2359
2356 def user_variables(self, names):
2360 def user_variables(self, names):
2357 """Get a list of variable names from the user's namespace.
2361 """Get a list of variable names from the user's namespace.
2358
2362
2359 Parameters
2363 Parameters
2360 ----------
2364 ----------
2361 names : list of strings
2365 names : list of strings
2362 A list of names of variables to be read from the user namespace.
2366 A list of names of variables to be read from the user namespace.
2363
2367
2364 Returns
2368 Returns
2365 -------
2369 -------
2366 A dict, keyed by the input names and with the repr() of each value.
2370 A dict, keyed by the input names and with the repr() of each value.
2367 """
2371 """
2368 out = {}
2372 out = {}
2369 user_ns = self.user_ns
2373 user_ns = self.user_ns
2370 for varname in names:
2374 for varname in names:
2371 try:
2375 try:
2372 value = repr(user_ns[varname])
2376 value = repr(user_ns[varname])
2373 except:
2377 except:
2374 value = self._simple_error()
2378 value = self._simple_error()
2375 out[varname] = value
2379 out[varname] = value
2376 return out
2380 return out
2377
2381
2378 def user_expressions(self, expressions):
2382 def user_expressions(self, expressions):
2379 """Evaluate a dict of expressions in the user's namespace.
2383 """Evaluate a dict of expressions in the user's namespace.
2380
2384
2381 Parameters
2385 Parameters
2382 ----------
2386 ----------
2383 expressions : dict
2387 expressions : dict
2384 A dict with string keys and string values. The expression values
2388 A dict with string keys and string values. The expression values
2385 should be valid Python expressions, each of which will be evaluated
2389 should be valid Python expressions, each of which will be evaluated
2386 in the user namespace.
2390 in the user namespace.
2387
2391
2388 Returns
2392 Returns
2389 -------
2393 -------
2390 A dict, keyed like the input expressions dict, with the repr() of each
2394 A dict, keyed like the input expressions dict, with the repr() of each
2391 value.
2395 value.
2392 """
2396 """
2393 out = {}
2397 out = {}
2394 user_ns = self.user_ns
2398 user_ns = self.user_ns
2395 global_ns = self.user_global_ns
2399 global_ns = self.user_global_ns
2396 for key, expr in expressions.iteritems():
2400 for key, expr in expressions.iteritems():
2397 try:
2401 try:
2398 value = repr(eval(expr, global_ns, user_ns))
2402 value = repr(eval(expr, global_ns, user_ns))
2399 except:
2403 except:
2400 value = self._simple_error()
2404 value = self._simple_error()
2401 out[key] = value
2405 out[key] = value
2402 return out
2406 return out
2403
2407
2404 #-------------------------------------------------------------------------
2408 #-------------------------------------------------------------------------
2405 # Things related to the running of code
2409 # Things related to the running of code
2406 #-------------------------------------------------------------------------
2410 #-------------------------------------------------------------------------
2407
2411
2408 def ex(self, cmd):
2412 def ex(self, cmd):
2409 """Execute a normal python statement in user namespace."""
2413 """Execute a normal python statement in user namespace."""
2410 with self.builtin_trap:
2414 with self.builtin_trap:
2411 exec cmd in self.user_global_ns, self.user_ns
2415 exec cmd in self.user_global_ns, self.user_ns
2412
2416
2413 def ev(self, expr):
2417 def ev(self, expr):
2414 """Evaluate python expression expr in user namespace.
2418 """Evaluate python expression expr in user namespace.
2415
2419
2416 Returns the result of evaluation
2420 Returns the result of evaluation
2417 """
2421 """
2418 with self.builtin_trap:
2422 with self.builtin_trap:
2419 return eval(expr, self.user_global_ns, self.user_ns)
2423 return eval(expr, self.user_global_ns, self.user_ns)
2420
2424
2421 def safe_execfile(self, fname, *where, **kw):
2425 def safe_execfile(self, fname, *where, **kw):
2422 """A safe version of the builtin execfile().
2426 """A safe version of the builtin execfile().
2423
2427
2424 This version will never throw an exception, but instead print
2428 This version will never throw an exception, but instead print
2425 helpful error messages to the screen. This only works on pure
2429 helpful error messages to the screen. This only works on pure
2426 Python files with the .py extension.
2430 Python files with the .py extension.
2427
2431
2428 Parameters
2432 Parameters
2429 ----------
2433 ----------
2430 fname : string
2434 fname : string
2431 The name of the file to be executed.
2435 The name of the file to be executed.
2432 where : tuple
2436 where : tuple
2433 One or two namespaces, passed to execfile() as (globals,locals).
2437 One or two namespaces, passed to execfile() as (globals,locals).
2434 If only one is given, it is passed as both.
2438 If only one is given, it is passed as both.
2435 exit_ignore : bool (False)
2439 exit_ignore : bool (False)
2436 If True, then silence SystemExit for non-zero status (it is always
2440 If True, then silence SystemExit for non-zero status (it is always
2437 silenced for zero status, as it is so common).
2441 silenced for zero status, as it is so common).
2438 raise_exceptions : bool (False)
2442 raise_exceptions : bool (False)
2439 If True raise exceptions everywhere. Meant for testing.
2443 If True raise exceptions everywhere. Meant for testing.
2440
2444
2441 """
2445 """
2442 kw.setdefault('exit_ignore', False)
2446 kw.setdefault('exit_ignore', False)
2443 kw.setdefault('raise_exceptions', False)
2447 kw.setdefault('raise_exceptions', False)
2444
2448
2445 fname = os.path.abspath(os.path.expanduser(fname))
2449 fname = os.path.abspath(os.path.expanduser(fname))
2446
2450
2447 # Make sure we can open the file
2451 # Make sure we can open the file
2448 try:
2452 try:
2449 with open(fname) as thefile:
2453 with open(fname) as thefile:
2450 pass
2454 pass
2451 except:
2455 except:
2452 warn('Could not open file <%s> for safe execution.' % fname)
2456 warn('Could not open file <%s> for safe execution.' % fname)
2453 return
2457 return
2454
2458
2455 # Find things also in current directory. This is needed to mimic the
2459 # Find things also in current directory. This is needed to mimic the
2456 # behavior of running a script from the system command line, where
2460 # behavior of running a script from the system command line, where
2457 # Python inserts the script's directory into sys.path
2461 # Python inserts the script's directory into sys.path
2458 dname = os.path.dirname(fname)
2462 dname = os.path.dirname(fname)
2459
2463
2460 with prepended_to_syspath(dname):
2464 with prepended_to_syspath(dname):
2461 try:
2465 try:
2462 py3compat.execfile(fname,*where)
2466 py3compat.execfile(fname,*where)
2463 except SystemExit as status:
2467 except SystemExit as status:
2464 # If the call was made with 0 or None exit status (sys.exit(0)
2468 # If the call was made with 0 or None exit status (sys.exit(0)
2465 # or sys.exit() ), don't bother showing a traceback, as both of
2469 # or sys.exit() ), don't bother showing a traceback, as both of
2466 # these are considered normal by the OS:
2470 # these are considered normal by the OS:
2467 # > python -c'import sys;sys.exit(0)'; echo $?
2471 # > python -c'import sys;sys.exit(0)'; echo $?
2468 # 0
2472 # 0
2469 # > python -c'import sys;sys.exit()'; echo $?
2473 # > python -c'import sys;sys.exit()'; echo $?
2470 # 0
2474 # 0
2471 # For other exit status, we show the exception unless
2475 # For other exit status, we show the exception unless
2472 # explicitly silenced, but only in short form.
2476 # explicitly silenced, but only in short form.
2473 if kw['raise_exceptions']:
2477 if kw['raise_exceptions']:
2474 raise
2478 raise
2475 if status.code not in (0, None) and not kw['exit_ignore']:
2479 if status.code not in (0, None) and not kw['exit_ignore']:
2476 self.showtraceback(exception_only=True)
2480 self.showtraceback(exception_only=True)
2477 except:
2481 except:
2478 if kw['raise_exceptions']:
2482 if kw['raise_exceptions']:
2479 raise
2483 raise
2480 self.showtraceback()
2484 self.showtraceback()
2481
2485
2482 def safe_execfile_ipy(self, fname):
2486 def safe_execfile_ipy(self, fname):
2483 """Like safe_execfile, but for .ipy files with IPython syntax.
2487 """Like safe_execfile, but for .ipy files with IPython syntax.
2484
2488
2485 Parameters
2489 Parameters
2486 ----------
2490 ----------
2487 fname : str
2491 fname : str
2488 The name of the file to execute. The filename must have a
2492 The name of the file to execute. The filename must have a
2489 .ipy extension.
2493 .ipy extension.
2490 """
2494 """
2491 fname = os.path.abspath(os.path.expanduser(fname))
2495 fname = os.path.abspath(os.path.expanduser(fname))
2492
2496
2493 # Make sure we can open the file
2497 # Make sure we can open the file
2494 try:
2498 try:
2495 with open(fname) as thefile:
2499 with open(fname) as thefile:
2496 pass
2500 pass
2497 except:
2501 except:
2498 warn('Could not open file <%s> for safe execution.' % fname)
2502 warn('Could not open file <%s> for safe execution.' % fname)
2499 return
2503 return
2500
2504
2501 # Find things also in current directory. This is needed to mimic the
2505 # Find things also in current directory. This is needed to mimic the
2502 # behavior of running a script from the system command line, where
2506 # behavior of running a script from the system command line, where
2503 # Python inserts the script's directory into sys.path
2507 # Python inserts the script's directory into sys.path
2504 dname = os.path.dirname(fname)
2508 dname = os.path.dirname(fname)
2505
2509
2506 with prepended_to_syspath(dname):
2510 with prepended_to_syspath(dname):
2507 try:
2511 try:
2508 with open(fname) as thefile:
2512 with open(fname) as thefile:
2509 # self.run_cell currently captures all exceptions
2513 # self.run_cell currently captures all exceptions
2510 # raised in user code. It would be nice if there were
2514 # raised in user code. It would be nice if there were
2511 # versions of runlines, execfile that did raise, so
2515 # versions of runlines, execfile that did raise, so
2512 # we could catch the errors.
2516 # we could catch the errors.
2513 self.run_cell(thefile.read(), store_history=False)
2517 self.run_cell(thefile.read(), store_history=False)
2514 except:
2518 except:
2515 self.showtraceback()
2519 self.showtraceback()
2516 warn('Unknown failure executing file: <%s>' % fname)
2520 warn('Unknown failure executing file: <%s>' % fname)
2517
2521
2518 def safe_run_module(self, mod_name, where):
2522 def safe_run_module(self, mod_name, where):
2519 """A safe version of runpy.run_module().
2523 """A safe version of runpy.run_module().
2520
2524
2521 This version will never throw an exception, but instead print
2525 This version will never throw an exception, but instead print
2522 helpful error messages to the screen.
2526 helpful error messages to the screen.
2523
2527
2524 Parameters
2528 Parameters
2525 ----------
2529 ----------
2526 mod_name : string
2530 mod_name : string
2527 The name of the module to be executed.
2531 The name of the module to be executed.
2528 where : dict
2532 where : dict
2529 The globals namespace.
2533 The globals namespace.
2530 """
2534 """
2531 try:
2535 try:
2532 where.update(
2536 where.update(
2533 runpy.run_module(str(mod_name), run_name="__main__",
2537 runpy.run_module(str(mod_name), run_name="__main__",
2534 alter_sys=True)
2538 alter_sys=True)
2535 )
2539 )
2536 except:
2540 except:
2537 self.showtraceback()
2541 self.showtraceback()
2538 warn('Unknown failure executing module: <%s>' % mod_name)
2542 warn('Unknown failure executing module: <%s>' % mod_name)
2539
2543
2540 def _run_cached_cell_magic(self, magic_name, line):
2544 def _run_cached_cell_magic(self, magic_name, line):
2541 """Special method to call a cell magic with the data stored in self.
2545 """Special method to call a cell magic with the data stored in self.
2542 """
2546 """
2543 cell = self._current_cell_magic_body
2547 cell = self._current_cell_magic_body
2544 self._current_cell_magic_body = None
2548 self._current_cell_magic_body = None
2545 return self.run_cell_magic(magic_name, line, cell)
2549 return self.run_cell_magic(magic_name, line, cell)
2546
2550
2547 def run_cell(self, raw_cell, store_history=False, silent=False):
2551 def run_cell(self, raw_cell, store_history=False, silent=False):
2548 """Run a complete IPython cell.
2552 """Run a complete IPython cell.
2549
2553
2550 Parameters
2554 Parameters
2551 ----------
2555 ----------
2552 raw_cell : str
2556 raw_cell : str
2553 The code (including IPython code such as %magic functions) to run.
2557 The code (including IPython code such as %magic functions) to run.
2554 store_history : bool
2558 store_history : bool
2555 If True, the raw and translated cell will be stored in IPython's
2559 If True, the raw and translated cell will be stored in IPython's
2556 history. For user code calling back into IPython's machinery, this
2560 history. For user code calling back into IPython's machinery, this
2557 should be set to False.
2561 should be set to False.
2558 silent : bool
2562 silent : bool
2559 If True, avoid side-effects, such as implicit displayhooks and
2563 If True, avoid side-effects, such as implicit displayhooks and
2560 and logging. silent=True forces store_history=False.
2564 and logging. silent=True forces store_history=False.
2561 """
2565 """
2562 if (not raw_cell) or raw_cell.isspace():
2566 if (not raw_cell) or raw_cell.isspace():
2563 return
2567 return
2564
2568
2565 if silent:
2569 if silent:
2566 store_history = False
2570 store_history = False
2567
2571
2568 self.input_splitter.push(raw_cell)
2572 self.input_splitter.push(raw_cell)
2569
2573
2570 # Check for cell magics, which leave state behind. This interface is
2574 # Check for cell magics, which leave state behind. This interface is
2571 # ugly, we need to do something cleaner later... Now the logic is
2575 # ugly, we need to do something cleaner later... Now the logic is
2572 # simply that the input_splitter remembers if there was a cell magic,
2576 # simply that the input_splitter remembers if there was a cell magic,
2573 # and in that case we grab the cell body.
2577 # and in that case we grab the cell body.
2574 if self.input_splitter.cell_magic_parts:
2578 if self.input_splitter.cell_magic_parts:
2575 self._current_cell_magic_body = \
2579 self._current_cell_magic_body = \
2576 ''.join(self.input_splitter.cell_magic_parts)
2580 ''.join(self.input_splitter.cell_magic_parts)
2577 cell = self.input_splitter.source_reset()
2581 cell = self.input_splitter.source_reset()
2578
2582
2579 with self.builtin_trap:
2583 with self.builtin_trap:
2580 prefilter_failed = False
2584 prefilter_failed = False
2581 if len(cell.splitlines()) == 1:
2585 if len(cell.splitlines()) == 1:
2582 try:
2586 try:
2583 # use prefilter_lines to handle trailing newlines
2587 # use prefilter_lines to handle trailing newlines
2584 # restore trailing newline for ast.parse
2588 # restore trailing newline for ast.parse
2585 cell = self.prefilter_manager.prefilter_lines(cell) + '\n'
2589 cell = self.prefilter_manager.prefilter_lines(cell) + '\n'
2586 except AliasError as e:
2590 except AliasError as e:
2587 error(e)
2591 error(e)
2588 prefilter_failed = True
2592 prefilter_failed = True
2589 except Exception:
2593 except Exception:
2590 # don't allow prefilter errors to crash IPython
2594 # don't allow prefilter errors to crash IPython
2591 self.showtraceback()
2595 self.showtraceback()
2592 prefilter_failed = True
2596 prefilter_failed = True
2593
2597
2594 # Store raw and processed history
2598 # Store raw and processed history
2595 if store_history:
2599 if store_history:
2596 self.history_manager.store_inputs(self.execution_count,
2600 self.history_manager.store_inputs(self.execution_count,
2597 cell, raw_cell)
2601 cell, raw_cell)
2598 if not silent:
2602 if not silent:
2599 self.logger.log(cell, raw_cell)
2603 self.logger.log(cell, raw_cell)
2600
2604
2601 if not prefilter_failed:
2605 if not prefilter_failed:
2602 # don't run if prefilter failed
2606 # don't run if prefilter failed
2603 cell_name = self.compile.cache(cell, self.execution_count)
2607 cell_name = self.compile.cache(cell, self.execution_count)
2604
2608
2605 with self.display_trap:
2609 with self.display_trap:
2606 try:
2610 try:
2607 code_ast = self.compile.ast_parse(cell,
2611 code_ast = self.compile.ast_parse(cell,
2608 filename=cell_name)
2612 filename=cell_name)
2609 except IndentationError:
2613 except IndentationError:
2610 self.showindentationerror()
2614 self.showindentationerror()
2611 if store_history:
2615 if store_history:
2612 self.execution_count += 1
2616 self.execution_count += 1
2613 return None
2617 return None
2614 except (OverflowError, SyntaxError, ValueError, TypeError,
2618 except (OverflowError, SyntaxError, ValueError, TypeError,
2615 MemoryError):
2619 MemoryError):
2616 self.showsyntaxerror()
2620 self.showsyntaxerror()
2617 if store_history:
2621 if store_history:
2618 self.execution_count += 1
2622 self.execution_count += 1
2619 return None
2623 return None
2620
2624
2621 code_ast = self.transform_ast(code_ast)
2625 code_ast = self.transform_ast(code_ast)
2622
2626
2623 interactivity = "none" if silent else self.ast_node_interactivity
2627 interactivity = "none" if silent else self.ast_node_interactivity
2624 self.run_ast_nodes(code_ast.body, cell_name,
2628 self.run_ast_nodes(code_ast.body, cell_name,
2625 interactivity=interactivity)
2629 interactivity=interactivity)
2626
2630
2627 # Execute any registered post-execution functions.
2631 # Execute any registered post-execution functions.
2628 # unless we are silent
2632 # unless we are silent
2629 post_exec = [] if silent else self._post_execute.iteritems()
2633 post_exec = [] if silent else self._post_execute.iteritems()
2630
2634
2631 for func, status in post_exec:
2635 for func, status in post_exec:
2632 if self.disable_failing_post_execute and not status:
2636 if self.disable_failing_post_execute and not status:
2633 continue
2637 continue
2634 try:
2638 try:
2635 func()
2639 func()
2636 except KeyboardInterrupt:
2640 except KeyboardInterrupt:
2637 print("\nKeyboardInterrupt", file=io.stderr)
2641 print("\nKeyboardInterrupt", file=io.stderr)
2638 except Exception:
2642 except Exception:
2639 # register as failing:
2643 # register as failing:
2640 self._post_execute[func] = False
2644 self._post_execute[func] = False
2641 self.showtraceback()
2645 self.showtraceback()
2642 print('\n'.join([
2646 print('\n'.join([
2643 "post-execution function %r produced an error." % func,
2647 "post-execution function %r produced an error." % func,
2644 "If this problem persists, you can disable failing post-exec functions with:",
2648 "If this problem persists, you can disable failing post-exec functions with:",
2645 "",
2649 "",
2646 " get_ipython().disable_failing_post_execute = True"
2650 " get_ipython().disable_failing_post_execute = True"
2647 ]), file=io.stderr)
2651 ]), file=io.stderr)
2648
2652
2649 if store_history:
2653 if store_history:
2650 # Write output to the database. Does nothing unless
2654 # Write output to the database. Does nothing unless
2651 # history output logging is enabled.
2655 # history output logging is enabled.
2652 self.history_manager.store_output(self.execution_count)
2656 self.history_manager.store_output(self.execution_count)
2653 # Each cell is a *single* input, regardless of how many lines it has
2657 # Each cell is a *single* input, regardless of how many lines it has
2654 self.execution_count += 1
2658 self.execution_count += 1
2655
2659
2656 def transform_ast(self, node):
2660 def transform_ast(self, node):
2657 """Apply the AST transformations from self.ast_transformers
2661 """Apply the AST transformations from self.ast_transformers
2658
2662
2659 Parameters
2663 Parameters
2660 ----------
2664 ----------
2661 node : ast.Node
2665 node : ast.Node
2662 The root node to be transformed. Typically called with the ast.Module
2666 The root node to be transformed. Typically called with the ast.Module
2663 produced by parsing user input.
2667 produced by parsing user input.
2664
2668
2665 Returns
2669 Returns
2666 -------
2670 -------
2667 An ast.Node corresponding to the node it was called with. Note that it
2671 An ast.Node corresponding to the node it was called with. Note that it
2668 may also modify the passed object, so don't rely on references to the
2672 may also modify the passed object, so don't rely on references to the
2669 original AST.
2673 original AST.
2670 """
2674 """
2671 for transformer in self.ast_transformers:
2675 for transformer in self.ast_transformers:
2672 try:
2676 try:
2673 node = transformer.visit(node)
2677 node = transformer.visit(node)
2674 except Exception:
2678 except Exception:
2675 warn("AST transformer %r threw an error. It will be unregistered." % transformer)
2679 warn("AST transformer %r threw an error. It will be unregistered." % transformer)
2676 self.ast_transformers.remove(transformer)
2680 self.ast_transformers.remove(transformer)
2677
2681
2678 return ast.fix_missing_locations(node)
2682 return ast.fix_missing_locations(node)
2679
2683
2680
2684
2681 def run_ast_nodes(self, nodelist, cell_name, interactivity='last_expr'):
2685 def run_ast_nodes(self, nodelist, cell_name, interactivity='last_expr'):
2682 """Run a sequence of AST nodes. The execution mode depends on the
2686 """Run a sequence of AST nodes. The execution mode depends on the
2683 interactivity parameter.
2687 interactivity parameter.
2684
2688
2685 Parameters
2689 Parameters
2686 ----------
2690 ----------
2687 nodelist : list
2691 nodelist : list
2688 A sequence of AST nodes to run.
2692 A sequence of AST nodes to run.
2689 cell_name : str
2693 cell_name : str
2690 Will be passed to the compiler as the filename of the cell. Typically
2694 Will be passed to the compiler as the filename of the cell. Typically
2691 the value returned by ip.compile.cache(cell).
2695 the value returned by ip.compile.cache(cell).
2692 interactivity : str
2696 interactivity : str
2693 'all', 'last', 'last_expr' or 'none', specifying which nodes should be
2697 'all', 'last', 'last_expr' or 'none', specifying which nodes should be
2694 run interactively (displaying output from expressions). 'last_expr'
2698 run interactively (displaying output from expressions). 'last_expr'
2695 will run the last node interactively only if it is an expression (i.e.
2699 will run the last node interactively only if it is an expression (i.e.
2696 expressions in loops or other blocks are not displayed. Other values
2700 expressions in loops or other blocks are not displayed. Other values
2697 for this parameter will raise a ValueError.
2701 for this parameter will raise a ValueError.
2698 """
2702 """
2699 if not nodelist:
2703 if not nodelist:
2700 return
2704 return
2701
2705
2702 if interactivity == 'last_expr':
2706 if interactivity == 'last_expr':
2703 if isinstance(nodelist[-1], ast.Expr):
2707 if isinstance(nodelist[-1], ast.Expr):
2704 interactivity = "last"
2708 interactivity = "last"
2705 else:
2709 else:
2706 interactivity = "none"
2710 interactivity = "none"
2707
2711
2708 if interactivity == 'none':
2712 if interactivity == 'none':
2709 to_run_exec, to_run_interactive = nodelist, []
2713 to_run_exec, to_run_interactive = nodelist, []
2710 elif interactivity == 'last':
2714 elif interactivity == 'last':
2711 to_run_exec, to_run_interactive = nodelist[:-1], nodelist[-1:]
2715 to_run_exec, to_run_interactive = nodelist[:-1], nodelist[-1:]
2712 elif interactivity == 'all':
2716 elif interactivity == 'all':
2713 to_run_exec, to_run_interactive = [], nodelist
2717 to_run_exec, to_run_interactive = [], nodelist
2714 else:
2718 else:
2715 raise ValueError("Interactivity was %r" % interactivity)
2719 raise ValueError("Interactivity was %r" % interactivity)
2716
2720
2717 exec_count = self.execution_count
2721 exec_count = self.execution_count
2718
2722
2719 try:
2723 try:
2720 for i, node in enumerate(to_run_exec):
2724 for i, node in enumerate(to_run_exec):
2721 mod = ast.Module([node])
2725 mod = ast.Module([node])
2722 code = self.compile(mod, cell_name, "exec")
2726 code = self.compile(mod, cell_name, "exec")
2723 if self.run_code(code):
2727 if self.run_code(code):
2724 return True
2728 return True
2725
2729
2726 for i, node in enumerate(to_run_interactive):
2730 for i, node in enumerate(to_run_interactive):
2727 mod = ast.Interactive([node])
2731 mod = ast.Interactive([node])
2728 code = self.compile(mod, cell_name, "single")
2732 code = self.compile(mod, cell_name, "single")
2729 if self.run_code(code):
2733 if self.run_code(code):
2730 return True
2734 return True
2731
2735
2732 # Flush softspace
2736 # Flush softspace
2733 if softspace(sys.stdout, 0):
2737 if softspace(sys.stdout, 0):
2734 print()
2738 print()
2735
2739
2736 except:
2740 except:
2737 # It's possible to have exceptions raised here, typically by
2741 # It's possible to have exceptions raised here, typically by
2738 # compilation of odd code (such as a naked 'return' outside a
2742 # compilation of odd code (such as a naked 'return' outside a
2739 # function) that did parse but isn't valid. Typically the exception
2743 # function) that did parse but isn't valid. Typically the exception
2740 # is a SyntaxError, but it's safest just to catch anything and show
2744 # is a SyntaxError, but it's safest just to catch anything and show
2741 # the user a traceback.
2745 # the user a traceback.
2742
2746
2743 # We do only one try/except outside the loop to minimize the impact
2747 # We do only one try/except outside the loop to minimize the impact
2744 # on runtime, and also because if any node in the node list is
2748 # on runtime, and also because if any node in the node list is
2745 # broken, we should stop execution completely.
2749 # broken, we should stop execution completely.
2746 self.showtraceback()
2750 self.showtraceback()
2747
2751
2748 return False
2752 return False
2749
2753
2750 def run_code(self, code_obj):
2754 def run_code(self, code_obj):
2751 """Execute a code object.
2755 """Execute a code object.
2752
2756
2753 When an exception occurs, self.showtraceback() is called to display a
2757 When an exception occurs, self.showtraceback() is called to display a
2754 traceback.
2758 traceback.
2755
2759
2756 Parameters
2760 Parameters
2757 ----------
2761 ----------
2758 code_obj : code object
2762 code_obj : code object
2759 A compiled code object, to be executed
2763 A compiled code object, to be executed
2760
2764
2761 Returns
2765 Returns
2762 -------
2766 -------
2763 False : successful execution.
2767 False : successful execution.
2764 True : an error occurred.
2768 True : an error occurred.
2765 """
2769 """
2766
2770
2767 # Set our own excepthook in case the user code tries to call it
2771 # Set our own excepthook in case the user code tries to call it
2768 # directly, so that the IPython crash handler doesn't get triggered
2772 # directly, so that the IPython crash handler doesn't get triggered
2769 old_excepthook,sys.excepthook = sys.excepthook, self.excepthook
2773 old_excepthook,sys.excepthook = sys.excepthook, self.excepthook
2770
2774
2771 # we save the original sys.excepthook in the instance, in case config
2775 # we save the original sys.excepthook in the instance, in case config
2772 # code (such as magics) needs access to it.
2776 # code (such as magics) needs access to it.
2773 self.sys_excepthook = old_excepthook
2777 self.sys_excepthook = old_excepthook
2774 outflag = 1 # happens in more places, so it's easier as default
2778 outflag = 1 # happens in more places, so it's easier as default
2775 try:
2779 try:
2776 try:
2780 try:
2777 self.hooks.pre_run_code_hook()
2781 self.hooks.pre_run_code_hook()
2778 #rprint('Running code', repr(code_obj)) # dbg
2782 #rprint('Running code', repr(code_obj)) # dbg
2779 exec code_obj in self.user_global_ns, self.user_ns
2783 exec code_obj in self.user_global_ns, self.user_ns
2780 finally:
2784 finally:
2781 # Reset our crash handler in place
2785 # Reset our crash handler in place
2782 sys.excepthook = old_excepthook
2786 sys.excepthook = old_excepthook
2783 except SystemExit:
2787 except SystemExit:
2784 self.showtraceback(exception_only=True)
2788 self.showtraceback(exception_only=True)
2785 warn("To exit: use 'exit', 'quit', or Ctrl-D.", level=1)
2789 warn("To exit: use 'exit', 'quit', or Ctrl-D.", level=1)
2786 except self.custom_exceptions:
2790 except self.custom_exceptions:
2787 etype,value,tb = sys.exc_info()
2791 etype,value,tb = sys.exc_info()
2788 self.CustomTB(etype,value,tb)
2792 self.CustomTB(etype,value,tb)
2789 except:
2793 except:
2790 self.showtraceback()
2794 self.showtraceback()
2791 else:
2795 else:
2792 outflag = 0
2796 outflag = 0
2793 return outflag
2797 return outflag
2794
2798
2795 # For backwards compatibility
2799 # For backwards compatibility
2796 runcode = run_code
2800 runcode = run_code
2797
2801
2798 #-------------------------------------------------------------------------
2802 #-------------------------------------------------------------------------
2799 # Things related to GUI support and pylab
2803 # Things related to GUI support and pylab
2800 #-------------------------------------------------------------------------
2804 #-------------------------------------------------------------------------
2801
2805
2802 def enable_gui(self, gui=None):
2806 def enable_gui(self, gui=None):
2803 raise NotImplementedError('Implement enable_gui in a subclass')
2807 raise NotImplementedError('Implement enable_gui in a subclass')
2804
2808
2805 def enable_pylab(self, gui=None, import_all=True, welcome_message=False):
2809 def enable_pylab(self, gui=None, import_all=True, welcome_message=False):
2806 """Activate pylab support at runtime.
2810 """Activate pylab support at runtime.
2807
2811
2808 This turns on support for matplotlib, preloads into the interactive
2812 This turns on support for matplotlib, preloads into the interactive
2809 namespace all of numpy and pylab, and configures IPython to correctly
2813 namespace all of numpy and pylab, and configures IPython to correctly
2810 interact with the GUI event loop. The GUI backend to be used can be
2814 interact with the GUI event loop. The GUI backend to be used can be
2811 optionally selected with the optional :param:`gui` argument.
2815 optionally selected with the optional :param:`gui` argument.
2812
2816
2813 Parameters
2817 Parameters
2814 ----------
2818 ----------
2815 gui : optional, string
2819 gui : optional, string
2816
2820
2817 If given, dictates the choice of matplotlib GUI backend to use
2821 If given, dictates the choice of matplotlib GUI backend to use
2818 (should be one of IPython's supported backends, 'qt', 'osx', 'tk',
2822 (should be one of IPython's supported backends, 'qt', 'osx', 'tk',
2819 'gtk', 'wx' or 'inline'), otherwise we use the default chosen by
2823 'gtk', 'wx' or 'inline'), otherwise we use the default chosen by
2820 matplotlib (as dictated by the matplotlib build-time options plus the
2824 matplotlib (as dictated by the matplotlib build-time options plus the
2821 user's matplotlibrc configuration file). Note that not all backends
2825 user's matplotlibrc configuration file). Note that not all backends
2822 make sense in all contexts, for example a terminal ipython can't
2826 make sense in all contexts, for example a terminal ipython can't
2823 display figures inline.
2827 display figures inline.
2824 """
2828 """
2825 from IPython.core.pylabtools import mpl_runner
2829 from IPython.core.pylabtools import mpl_runner
2826 # We want to prevent the loading of pylab to pollute the user's
2830 # We want to prevent the loading of pylab to pollute the user's
2827 # namespace as shown by the %who* magics, so we execute the activation
2831 # namespace as shown by the %who* magics, so we execute the activation
2828 # code in an empty namespace, and we update *both* user_ns and
2832 # code in an empty namespace, and we update *both* user_ns and
2829 # user_ns_hidden with this information.
2833 # user_ns_hidden with this information.
2830 ns = {}
2834 ns = {}
2831 try:
2835 try:
2832 gui = pylab_activate(ns, gui, import_all, self, welcome_message=welcome_message)
2836 gui = pylab_activate(ns, gui, import_all, self, welcome_message=welcome_message)
2833 except KeyError:
2837 except KeyError:
2834 error("Backend %r not supported" % gui)
2838 error("Backend %r not supported" % gui)
2835 return
2839 return
2836 self.user_ns.update(ns)
2840 self.user_ns.update(ns)
2837 self.user_ns_hidden.update(ns)
2841 self.user_ns_hidden.update(ns)
2838 # Now we must activate the gui pylab wants to use, and fix %run to take
2842 # Now we must activate the gui pylab wants to use, and fix %run to take
2839 # plot updates into account
2843 # plot updates into account
2840 self.enable_gui(gui)
2844 self.enable_gui(gui)
2841 self.magics_manager.registry['ExecutionMagics'].default_runner = \
2845 self.magics_manager.registry['ExecutionMagics'].default_runner = \
2842 mpl_runner(self.safe_execfile)
2846 mpl_runner(self.safe_execfile)
2843
2847
2844 #-------------------------------------------------------------------------
2848 #-------------------------------------------------------------------------
2845 # Utilities
2849 # Utilities
2846 #-------------------------------------------------------------------------
2850 #-------------------------------------------------------------------------
2847
2851
2848 def var_expand(self, cmd, depth=0, formatter=DollarFormatter()):
2852 def var_expand(self, cmd, depth=0, formatter=DollarFormatter()):
2849 """Expand python variables in a string.
2853 """Expand python variables in a string.
2850
2854
2851 The depth argument indicates how many frames above the caller should
2855 The depth argument indicates how many frames above the caller should
2852 be walked to look for the local namespace where to expand variables.
2856 be walked to look for the local namespace where to expand variables.
2853
2857
2854 The global namespace for expansion is always the user's interactive
2858 The global namespace for expansion is always the user's interactive
2855 namespace.
2859 namespace.
2856 """
2860 """
2857 ns = self.user_ns.copy()
2861 ns = self.user_ns.copy()
2858 ns.update(sys._getframe(depth+1).f_locals)
2862 ns.update(sys._getframe(depth+1).f_locals)
2859 try:
2863 try:
2860 # We have to use .vformat() here, because 'self' is a valid and common
2864 # We have to use .vformat() here, because 'self' is a valid and common
2861 # name, and expanding **ns for .format() would make it collide with
2865 # name, and expanding **ns for .format() would make it collide with
2862 # the 'self' argument of the method.
2866 # the 'self' argument of the method.
2863 cmd = formatter.vformat(cmd, args=[], kwargs=ns)
2867 cmd = formatter.vformat(cmd, args=[], kwargs=ns)
2864 except Exception:
2868 except Exception:
2865 # if formatter couldn't format, just let it go untransformed
2869 # if formatter couldn't format, just let it go untransformed
2866 pass
2870 pass
2867 return cmd
2871 return cmd
2868
2872
2869 def mktempfile(self, data=None, prefix='ipython_edit_'):
2873 def mktempfile(self, data=None, prefix='ipython_edit_'):
2870 """Make a new tempfile and return its filename.
2874 """Make a new tempfile and return its filename.
2871
2875
2872 This makes a call to tempfile.mktemp, but it registers the created
2876 This makes a call to tempfile.mktemp, but it registers the created
2873 filename internally so ipython cleans it up at exit time.
2877 filename internally so ipython cleans it up at exit time.
2874
2878
2875 Optional inputs:
2879 Optional inputs:
2876
2880
2877 - data(None): if data is given, it gets written out to the temp file
2881 - data(None): if data is given, it gets written out to the temp file
2878 immediately, and the file is closed again."""
2882 immediately, and the file is closed again."""
2879
2883
2880 filename = tempfile.mktemp('.py', prefix)
2884 filename = tempfile.mktemp('.py', prefix)
2881 self.tempfiles.append(filename)
2885 self.tempfiles.append(filename)
2882
2886
2883 if data:
2887 if data:
2884 tmp_file = open(filename,'w')
2888 tmp_file = open(filename,'w')
2885 tmp_file.write(data)
2889 tmp_file.write(data)
2886 tmp_file.close()
2890 tmp_file.close()
2887 return filename
2891 return filename
2888
2892
2889 # TODO: This should be removed when Term is refactored.
2893 # TODO: This should be removed when Term is refactored.
2890 def write(self,data):
2894 def write(self,data):
2891 """Write a string to the default output"""
2895 """Write a string to the default output"""
2892 io.stdout.write(data)
2896 io.stdout.write(data)
2893
2897
2894 # TODO: This should be removed when Term is refactored.
2898 # TODO: This should be removed when Term is refactored.
2895 def write_err(self,data):
2899 def write_err(self,data):
2896 """Write a string to the default error output"""
2900 """Write a string to the default error output"""
2897 io.stderr.write(data)
2901 io.stderr.write(data)
2898
2902
2899 def ask_yes_no(self, prompt, default=None):
2903 def ask_yes_no(self, prompt, default=None):
2900 if self.quiet:
2904 if self.quiet:
2901 return True
2905 return True
2902 return ask_yes_no(prompt,default)
2906 return ask_yes_no(prompt,default)
2903
2907
2904 def show_usage(self):
2908 def show_usage(self):
2905 """Show a usage message"""
2909 """Show a usage message"""
2906 page.page(IPython.core.usage.interactive_usage)
2910 page.page(IPython.core.usage.interactive_usage)
2907
2911
2908 def extract_input_lines(self, range_str, raw=False):
2912 def extract_input_lines(self, range_str, raw=False):
2909 """Return as a string a set of input history slices.
2913 """Return as a string a set of input history slices.
2910
2914
2911 Parameters
2915 Parameters
2912 ----------
2916 ----------
2913 range_str : string
2917 range_str : string
2914 The set of slices is given as a string, like "~5/6-~4/2 4:8 9",
2918 The set of slices is given as a string, like "~5/6-~4/2 4:8 9",
2915 since this function is for use by magic functions which get their
2919 since this function is for use by magic functions which get their
2916 arguments as strings. The number before the / is the session
2920 arguments as strings. The number before the / is the session
2917 number: ~n goes n back from the current session.
2921 number: ~n goes n back from the current session.
2918
2922
2919 Optional Parameters:
2923 Optional Parameters:
2920 - raw(False): by default, the processed input is used. If this is
2924 - raw(False): by default, the processed input is used. If this is
2921 true, the raw input history is used instead.
2925 true, the raw input history is used instead.
2922
2926
2923 Note that slices can be called with two notations:
2927 Note that slices can be called with two notations:
2924
2928
2925 N:M -> standard python form, means including items N...(M-1).
2929 N:M -> standard python form, means including items N...(M-1).
2926
2930
2927 N-M -> include items N..M (closed endpoint)."""
2931 N-M -> include items N..M (closed endpoint)."""
2928 lines = self.history_manager.get_range_by_str(range_str, raw=raw)
2932 lines = self.history_manager.get_range_by_str(range_str, raw=raw)
2929 return "\n".join(x for _, _, x in lines)
2933 return "\n".join(x for _, _, x in lines)
2930
2934
2931 def find_user_code(self, target, raw=True, py_only=False, skip_encoding_cookie=True):
2935 def find_user_code(self, target, raw=True, py_only=False, skip_encoding_cookie=True):
2932 """Get a code string from history, file, url, or a string or macro.
2936 """Get a code string from history, file, url, or a string or macro.
2933
2937
2934 This is mainly used by magic functions.
2938 This is mainly used by magic functions.
2935
2939
2936 Parameters
2940 Parameters
2937 ----------
2941 ----------
2938
2942
2939 target : str
2943 target : str
2940
2944
2941 A string specifying code to retrieve. This will be tried respectively
2945 A string specifying code to retrieve. This will be tried respectively
2942 as: ranges of input history (see %history for syntax), url,
2946 as: ranges of input history (see %history for syntax), url,
2943 correspnding .py file, filename, or an expression evaluating to a
2947 correspnding .py file, filename, or an expression evaluating to a
2944 string or Macro in the user namespace.
2948 string or Macro in the user namespace.
2945
2949
2946 raw : bool
2950 raw : bool
2947 If true (default), retrieve raw history. Has no effect on the other
2951 If true (default), retrieve raw history. Has no effect on the other
2948 retrieval mechanisms.
2952 retrieval mechanisms.
2949
2953
2950 py_only : bool (default False)
2954 py_only : bool (default False)
2951 Only try to fetch python code, do not try alternative methods to decode file
2955 Only try to fetch python code, do not try alternative methods to decode file
2952 if unicode fails.
2956 if unicode fails.
2953
2957
2954 Returns
2958 Returns
2955 -------
2959 -------
2956 A string of code.
2960 A string of code.
2957
2961
2958 ValueError is raised if nothing is found, and TypeError if it evaluates
2962 ValueError is raised if nothing is found, and TypeError if it evaluates
2959 to an object of another type. In each case, .args[0] is a printable
2963 to an object of another type. In each case, .args[0] is a printable
2960 message.
2964 message.
2961 """
2965 """
2962 code = self.extract_input_lines(target, raw=raw) # Grab history
2966 code = self.extract_input_lines(target, raw=raw) # Grab history
2963 if code:
2967 if code:
2964 return code
2968 return code
2965 utarget = unquote_filename(target)
2969 utarget = unquote_filename(target)
2966 try:
2970 try:
2967 if utarget.startswith(('http://', 'https://')):
2971 if utarget.startswith(('http://', 'https://')):
2968 return openpy.read_py_url(utarget, skip_encoding_cookie=skip_encoding_cookie)
2972 return openpy.read_py_url(utarget, skip_encoding_cookie=skip_encoding_cookie)
2969 except UnicodeDecodeError:
2973 except UnicodeDecodeError:
2970 if not py_only :
2974 if not py_only :
2971 response = urllib.urlopen(target)
2975 response = urllib.urlopen(target)
2972 return response.read().decode('latin1')
2976 return response.read().decode('latin1')
2973 raise ValueError(("'%s' seem to be unreadable.") % utarget)
2977 raise ValueError(("'%s' seem to be unreadable.") % utarget)
2974
2978
2975 potential_target = [target]
2979 potential_target = [target]
2976 try :
2980 try :
2977 potential_target.insert(0,get_py_filename(target))
2981 potential_target.insert(0,get_py_filename(target))
2978 except IOError:
2982 except IOError:
2979 pass
2983 pass
2980
2984
2981 for tgt in potential_target :
2985 for tgt in potential_target :
2982 if os.path.isfile(tgt): # Read file
2986 if os.path.isfile(tgt): # Read file
2983 try :
2987 try :
2984 return openpy.read_py_file(tgt, skip_encoding_cookie=skip_encoding_cookie)
2988 return openpy.read_py_file(tgt, skip_encoding_cookie=skip_encoding_cookie)
2985 except UnicodeDecodeError :
2989 except UnicodeDecodeError :
2986 if not py_only :
2990 if not py_only :
2987 with io_open(tgt,'r', encoding='latin1') as f :
2991 with io_open(tgt,'r', encoding='latin1') as f :
2988 return f.read()
2992 return f.read()
2989 raise ValueError(("'%s' seem to be unreadable.") % target)
2993 raise ValueError(("'%s' seem to be unreadable.") % target)
2990
2994
2991 try: # User namespace
2995 try: # User namespace
2992 codeobj = eval(target, self.user_ns)
2996 codeobj = eval(target, self.user_ns)
2993 except Exception:
2997 except Exception:
2994 raise ValueError(("'%s' was not found in history, as a file, url, "
2998 raise ValueError(("'%s' was not found in history, as a file, url, "
2995 "nor in the user namespace.") % target)
2999 "nor in the user namespace.") % target)
2996 if isinstance(codeobj, basestring):
3000 if isinstance(codeobj, basestring):
2997 return codeobj
3001 return codeobj
2998 elif isinstance(codeobj, Macro):
3002 elif isinstance(codeobj, Macro):
2999 return codeobj.value
3003 return codeobj.value
3000
3004
3001 raise TypeError("%s is neither a string nor a macro." % target,
3005 raise TypeError("%s is neither a string nor a macro." % target,
3002 codeobj)
3006 codeobj)
3003
3007
3004 #-------------------------------------------------------------------------
3008 #-------------------------------------------------------------------------
3005 # Things related to IPython exiting
3009 # Things related to IPython exiting
3006 #-------------------------------------------------------------------------
3010 #-------------------------------------------------------------------------
3007 def atexit_operations(self):
3011 def atexit_operations(self):
3008 """This will be executed at the time of exit.
3012 """This will be executed at the time of exit.
3009
3013
3010 Cleanup operations and saving of persistent data that is done
3014 Cleanup operations and saving of persistent data that is done
3011 unconditionally by IPython should be performed here.
3015 unconditionally by IPython should be performed here.
3012
3016
3013 For things that may depend on startup flags or platform specifics (such
3017 For things that may depend on startup flags or platform specifics (such
3014 as having readline or not), register a separate atexit function in the
3018 as having readline or not), register a separate atexit function in the
3015 code that has the appropriate information, rather than trying to
3019 code that has the appropriate information, rather than trying to
3016 clutter
3020 clutter
3017 """
3021 """
3018 # Close the history session (this stores the end time and line count)
3022 # Close the history session (this stores the end time and line count)
3019 # this must be *before* the tempfile cleanup, in case of temporary
3023 # this must be *before* the tempfile cleanup, in case of temporary
3020 # history db
3024 # history db
3021 self.history_manager.end_session()
3025 self.history_manager.end_session()
3022
3026
3023 # Cleanup all tempfiles left around
3027 # Cleanup all tempfiles left around
3024 for tfile in self.tempfiles:
3028 for tfile in self.tempfiles:
3025 try:
3029 try:
3026 os.unlink(tfile)
3030 os.unlink(tfile)
3027 except OSError:
3031 except OSError:
3028 pass
3032 pass
3029
3033
3030 # Clear all user namespaces to release all references cleanly.
3034 # Clear all user namespaces to release all references cleanly.
3031 self.reset(new_session=False)
3035 self.reset(new_session=False)
3032
3036
3033 # Run user hooks
3037 # Run user hooks
3034 self.hooks.shutdown_hook()
3038 self.hooks.shutdown_hook()
3035
3039
3036 def cleanup(self):
3040 def cleanup(self):
3037 self.restore_sys_module_state()
3041 self.restore_sys_module_state()
3038
3042
3039
3043
3040 class InteractiveShellABC(object):
3044 class InteractiveShellABC(object):
3041 """An abstract base class for InteractiveShell."""
3045 """An abstract base class for InteractiveShell."""
3042 __metaclass__ = abc.ABCMeta
3046 __metaclass__ = abc.ABCMeta
3043
3047
3044 InteractiveShellABC.register(InteractiveShell)
3048 InteractiveShellABC.register(InteractiveShell)
@@ -1,619 +1,623 b''
1 # -*- coding: utf-8 -*-
1 # -*- coding: utf-8 -*-
2 """
2 """
3 ======
3 ======
4 Rmagic
4 Rmagic
5 ======
5 ======
6
6
7 Magic command interface for interactive work with R via rpy2
7 Magic command interface for interactive work with R via rpy2
8
8
9 Usage
9 Usage
10 =====
10 =====
11
11
12 ``%R``
12 ``%R``
13
13
14 {R_DOC}
14 {R_DOC}
15
15
16 ``%Rpush``
16 ``%Rpush``
17
17
18 {RPUSH_DOC}
18 {RPUSH_DOC}
19
19
20 ``%Rpull``
20 ``%Rpull``
21
21
22 {RPULL_DOC}
22 {RPULL_DOC}
23
23
24 ``%Rget``
24 ``%Rget``
25
25
26 {RGET_DOC}
26 {RGET_DOC}
27
27
28 """
28 """
29
29
30 #-----------------------------------------------------------------------------
30 #-----------------------------------------------------------------------------
31 # Copyright (C) 2012 The IPython Development Team
31 # Copyright (C) 2012 The IPython Development Team
32 #
32 #
33 # Distributed under the terms of the BSD License. The full license is in
33 # Distributed under the terms of the BSD License. The full license is in
34 # the file COPYING, distributed as part of this software.
34 # the file COPYING, distributed as part of this software.
35 #-----------------------------------------------------------------------------
35 #-----------------------------------------------------------------------------
36
36
37 import sys
37 import sys
38 import tempfile
38 import tempfile
39 from glob import glob
39 from glob import glob
40 from shutil import rmtree
40 from shutil import rmtree
41 from getopt import getopt
41 from getopt import getopt
42
42
43 # numpy and rpy2 imports
43 # numpy and rpy2 imports
44
44
45 import numpy as np
45 import numpy as np
46
46
47 import rpy2.rinterface as ri
47 import rpy2.rinterface as ri
48 import rpy2.robjects as ro
48 import rpy2.robjects as ro
49 from rpy2.robjects.numpy2ri import numpy2ri
49 from rpy2.robjects.numpy2ri import numpy2ri
50 ro.conversion.py2ri = numpy2ri
50 ro.conversion.py2ri = numpy2ri
51
51
52 # IPython imports
52 # IPython imports
53
53
54 from IPython.core.displaypub import publish_display_data
54 from IPython.core.displaypub import publish_display_data
55 from IPython.core.magic import (Magics, magics_class, cell_magic, line_magic,
55 from IPython.core.magic import (Magics, magics_class, cell_magic, line_magic,
56 line_cell_magic, needs_local_scope)
56 line_cell_magic, needs_local_scope)
57 from IPython.testing.skipdoctest import skip_doctest
57 from IPython.testing.skipdoctest import skip_doctest
58 from IPython.core.magic_arguments import (
58 from IPython.core.magic_arguments import (
59 argument, magic_arguments, parse_argstring
59 argument, magic_arguments, parse_argstring
60 )
60 )
61 from IPython.utils.py3compat import str_to_unicode, unicode_to_str, PY3
61 from IPython.utils.py3compat import str_to_unicode, unicode_to_str, PY3
62
62
63 class RInterpreterError(ri.RRuntimeError):
63 class RInterpreterError(ri.RRuntimeError):
64 """An error when running R code in a %%R magic cell."""
64 """An error when running R code in a %%R magic cell."""
65 def __init__(self, line, err, stdout):
65 def __init__(self, line, err, stdout):
66 self.line = line
66 self.line = line
67 self.err = err.rstrip()
67 self.err = err.rstrip()
68 self.stdout = stdout.rstrip()
68 self.stdout = stdout.rstrip()
69
69
70 def __unicode__(self):
70 def __unicode__(self):
71 s = 'Failed to parse and evaluate line %r.\nR error message: %r' % \
71 s = 'Failed to parse and evaluate line %r.\nR error message: %r' % \
72 (self.line, self.err)
72 (self.line, self.err)
73 if self.stdout and (self.stdout != self.err):
73 if self.stdout and (self.stdout != self.err):
74 s += '\nR stdout:\n' + self.stdout
74 s += '\nR stdout:\n' + self.stdout
75 return s
75 return s
76
76
77 if PY3:
77 if PY3:
78 __str__ = __unicode__
78 __str__ = __unicode__
79 else:
79 else:
80 def __str__(self):
80 def __str__(self):
81 return unicode_to_str(unicode(self), 'utf-8')
81 return unicode_to_str(unicode(self), 'utf-8')
82
82
83 def Rconverter(Robj, dataframe=False):
83 def Rconverter(Robj, dataframe=False):
84 """
84 """
85 Convert an object in R's namespace to one suitable
85 Convert an object in R's namespace to one suitable
86 for ipython's namespace.
86 for ipython's namespace.
87
87
88 For a data.frame, it tries to return a structured array.
88 For a data.frame, it tries to return a structured array.
89 It first checks for colnames, then names.
89 It first checks for colnames, then names.
90 If all are NULL, it returns np.asarray(Robj), else
90 If all are NULL, it returns np.asarray(Robj), else
91 it tries to construct a recarray
91 it tries to construct a recarray
92
92
93 Parameters
93 Parameters
94 ----------
94 ----------
95
95
96 Robj: an R object returned from rpy2
96 Robj: an R object returned from rpy2
97 """
97 """
98 is_data_frame = ro.r('is.data.frame')
98 is_data_frame = ro.r('is.data.frame')
99 colnames = ro.r('colnames')
99 colnames = ro.r('colnames')
100 rownames = ro.r('rownames') # with pandas, these could be used for the index
100 rownames = ro.r('rownames') # with pandas, these could be used for the index
101 names = ro.r('names')
101 names = ro.r('names')
102
102
103 if dataframe:
103 if dataframe:
104 as_data_frame = ro.r('as.data.frame')
104 as_data_frame = ro.r('as.data.frame')
105 cols = colnames(Robj)
105 cols = colnames(Robj)
106 _names = names(Robj)
106 _names = names(Robj)
107 if cols != ri.NULL:
107 if cols != ri.NULL:
108 Robj = as_data_frame(Robj)
108 Robj = as_data_frame(Robj)
109 names = tuple(np.array(cols))
109 names = tuple(np.array(cols))
110 elif _names != ri.NULL:
110 elif _names != ri.NULL:
111 names = tuple(np.array(_names))
111 names = tuple(np.array(_names))
112 else: # failed to find names
112 else: # failed to find names
113 return np.asarray(Robj)
113 return np.asarray(Robj)
114 Robj = np.rec.fromarrays(Robj, names = names)
114 Robj = np.rec.fromarrays(Robj, names = names)
115 return np.asarray(Robj)
115 return np.asarray(Robj)
116
116
117 @magics_class
117 @magics_class
118 class RMagics(Magics):
118 class RMagics(Magics):
119 """A set of magics useful for interactive work with R via rpy2.
119 """A set of magics useful for interactive work with R via rpy2.
120 """
120 """
121
121
122 def __init__(self, shell, Rconverter=Rconverter,
122 def __init__(self, shell, Rconverter=Rconverter,
123 pyconverter=np.asarray,
123 pyconverter=np.asarray,
124 cache_display_data=False):
124 cache_display_data=False):
125 """
125 """
126 Parameters
126 Parameters
127 ----------
127 ----------
128
128
129 shell : IPython shell
129 shell : IPython shell
130
130
131 pyconverter : callable
131 pyconverter : callable
132 To be called on values in ipython namespace before
132 To be called on values in ipython namespace before
133 assigning to variables in rpy2.
133 assigning to variables in rpy2.
134
134
135 cache_display_data : bool
135 cache_display_data : bool
136 If True, the published results of the final call to R are
136 If True, the published results of the final call to R are
137 cached in the variable 'display_cache'.
137 cached in the variable 'display_cache'.
138
138
139 """
139 """
140 super(RMagics, self).__init__(shell)
140 super(RMagics, self).__init__(shell)
141 self.cache_display_data = cache_display_data
141 self.cache_display_data = cache_display_data
142
142
143 self.r = ro.R()
143 self.r = ro.R()
144
144
145 self.Rstdout_cache = []
145 self.Rstdout_cache = []
146 self.pyconverter = pyconverter
146 self.pyconverter = pyconverter
147 self.Rconverter = Rconverter
147 self.Rconverter = Rconverter
148
148
149 def eval(self, line):
149 def eval(self, line):
150 '''
150 '''
151 Parse and evaluate a line with rpy2.
151 Parse and evaluate a line with rpy2.
152 Returns the output to R's stdout() connection
152 Returns the output to R's stdout() connection
153 and the value of eval(parse(line)).
153 and the value of eval(parse(line)).
154 '''
154 '''
155 old_writeconsole = ri.get_writeconsole()
155 old_writeconsole = ri.get_writeconsole()
156 ri.set_writeconsole(self.write_console)
156 ri.set_writeconsole(self.write_console)
157 try:
157 try:
158 value = ri.baseenv['eval'](ri.parse(line))
158 value = ri.baseenv['eval'](ri.parse(line))
159 except (ri.RRuntimeError, ValueError) as exception:
159 except (ri.RRuntimeError, ValueError) as exception:
160 warning_or_other_msg = self.flush() # otherwise next return seems to have copy of error
160 warning_or_other_msg = self.flush() # otherwise next return seems to have copy of error
161 raise RInterpreterError(line, str_to_unicode(str(exception)), warning_or_other_msg)
161 raise RInterpreterError(line, str_to_unicode(str(exception)), warning_or_other_msg)
162 text_output = self.flush()
162 text_output = self.flush()
163 ri.set_writeconsole(old_writeconsole)
163 ri.set_writeconsole(old_writeconsole)
164 return text_output, value
164 return text_output, value
165
165
166 def write_console(self, output):
166 def write_console(self, output):
167 '''
167 '''
168 A hook to capture R's stdout in a cache.
168 A hook to capture R's stdout in a cache.
169 '''
169 '''
170 self.Rstdout_cache.append(output)
170 self.Rstdout_cache.append(output)
171
171
172 def flush(self):
172 def flush(self):
173 '''
173 '''
174 Flush R's stdout cache to a string, returning the string.
174 Flush R's stdout cache to a string, returning the string.
175 '''
175 '''
176 value = ''.join([str_to_unicode(s, 'utf-8') for s in self.Rstdout_cache])
176 value = ''.join([str_to_unicode(s, 'utf-8') for s in self.Rstdout_cache])
177 self.Rstdout_cache = []
177 self.Rstdout_cache = []
178 return value
178 return value
179
179
180 @skip_doctest
180 @skip_doctest
181 @needs_local_scope
181 @needs_local_scope
182 @line_magic
182 @line_magic
183 def Rpush(self, line, local_ns=None):
183 def Rpush(self, line, local_ns=None):
184 '''
184 '''
185 A line-level magic for R that pushes
185 A line-level magic for R that pushes
186 variables from python to rpy2. The line should be made up
186 variables from python to rpy2. The line should be made up
187 of whitespace separated variable names in the IPython
187 of whitespace separated variable names in the IPython
188 namespace::
188 namespace::
189
189
190 In [7]: import numpy as np
190 In [7]: import numpy as np
191
191
192 In [8]: X = np.array([4.5,6.3,7.9])
192 In [8]: X = np.array([4.5,6.3,7.9])
193
193
194 In [9]: X.mean()
194 In [9]: X.mean()
195 Out[9]: 6.2333333333333343
195 Out[9]: 6.2333333333333343
196
196
197 In [10]: %Rpush X
197 In [10]: %Rpush X
198
198
199 In [11]: %R mean(X)
199 In [11]: %R mean(X)
200 Out[11]: array([ 6.23333333])
200 Out[11]: array([ 6.23333333])
201
201
202 '''
202 '''
203 if local_ns is None:
203 if local_ns is None:
204 local_ns = {}
204 local_ns = {}
205
205
206 inputs = line.split(' ')
206 inputs = line.split(' ')
207 for input in inputs:
207 for input in inputs:
208 try:
208 try:
209 val = local_ns[input]
209 val = local_ns[input]
210 except KeyError:
210 except KeyError:
211 try:
211 try:
212 val = self.shell.user_ns[input]
212 val = self.shell.user_ns[input]
213 except KeyError:
213 except KeyError:
214 # reraise the KeyError as a NameError so that it looks like
214 # reraise the KeyError as a NameError so that it looks like
215 # the standard python behavior when you use an unnamed
215 # the standard python behavior when you use an unnamed
216 # variable
216 # variable
217 raise NameError("name '%s' is not defined" % input)
217 raise NameError("name '%s' is not defined" % input)
218
218
219 self.r.assign(input, self.pyconverter(val))
219 self.r.assign(input, self.pyconverter(val))
220
220
221 @skip_doctest
221 @skip_doctest
222 @magic_arguments()
222 @magic_arguments()
223 @argument(
223 @argument(
224 '-d', '--as_dataframe', action='store_true',
224 '-d', '--as_dataframe', action='store_true',
225 default=False,
225 default=False,
226 help='Convert objects to data.frames before returning to ipython.'
226 help='Convert objects to data.frames before returning to ipython.'
227 )
227 )
228 @argument(
228 @argument(
229 'outputs',
229 'outputs',
230 nargs='*',
230 nargs='*',
231 )
231 )
232 @line_magic
232 @line_magic
233 def Rpull(self, line):
233 def Rpull(self, line):
234 '''
234 '''
235 A line-level magic for R that pulls
235 A line-level magic for R that pulls
236 variables from python to rpy2::
236 variables from python to rpy2::
237
237
238 In [18]: _ = %R x = c(3,4,6.7); y = c(4,6,7); z = c('a',3,4)
238 In [18]: _ = %R x = c(3,4,6.7); y = c(4,6,7); z = c('a',3,4)
239
239
240 In [19]: %Rpull x y z
240 In [19]: %Rpull x y z
241
241
242 In [20]: x
242 In [20]: x
243 Out[20]: array([ 3. , 4. , 6.7])
243 Out[20]: array([ 3. , 4. , 6.7])
244
244
245 In [21]: y
245 In [21]: y
246 Out[21]: array([ 4., 6., 7.])
246 Out[21]: array([ 4., 6., 7.])
247
247
248 In [22]: z
248 In [22]: z
249 Out[22]:
249 Out[22]:
250 array(['a', '3', '4'],
250 array(['a', '3', '4'],
251 dtype='|S1')
251 dtype='|S1')
252
252
253
253
254 If --as_dataframe, then each object is returned as a structured array
254 If --as_dataframe, then each object is returned as a structured array
255 after first passed through "as.data.frame" in R before
255 after first passed through "as.data.frame" in R before
256 being calling self.Rconverter.
256 being calling self.Rconverter.
257 This is useful when a structured array is desired as output, or
257 This is useful when a structured array is desired as output, or
258 when the object in R has mixed data types.
258 when the object in R has mixed data types.
259 See the %%R docstring for more examples.
259 See the %%R docstring for more examples.
260
260
261 Notes
261 Notes
262 -----
262 -----
263
263
264 Beware that R names can have '.' so this is not fool proof.
264 Beware that R names can have '.' so this is not fool proof.
265 To avoid this, don't name your R objects with '.'s...
265 To avoid this, don't name your R objects with '.'s...
266
266
267 '''
267 '''
268 args = parse_argstring(self.Rpull, line)
268 args = parse_argstring(self.Rpull, line)
269 outputs = args.outputs
269 outputs = args.outputs
270 for output in outputs:
270 for output in outputs:
271 self.shell.push({output:self.Rconverter(self.r(output),dataframe=args.as_dataframe)})
271 self.shell.push({output:self.Rconverter(self.r(output),dataframe=args.as_dataframe)})
272
272
273 @skip_doctest
273 @skip_doctest
274 @magic_arguments()
274 @magic_arguments()
275 @argument(
275 @argument(
276 '-d', '--as_dataframe', action='store_true',
276 '-d', '--as_dataframe', action='store_true',
277 default=False,
277 default=False,
278 help='Convert objects to data.frames before returning to ipython.'
278 help='Convert objects to data.frames before returning to ipython.'
279 )
279 )
280 @argument(
280 @argument(
281 'output',
281 'output',
282 nargs=1,
282 nargs=1,
283 type=str,
283 type=str,
284 )
284 )
285 @line_magic
285 @line_magic
286 def Rget(self, line):
286 def Rget(self, line):
287 '''
287 '''
288 Return an object from rpy2, possibly as a structured array (if possible).
288 Return an object from rpy2, possibly as a structured array (if possible).
289 Similar to Rpull except only one argument is accepted and the value is
289 Similar to Rpull except only one argument is accepted and the value is
290 returned rather than pushed to self.shell.user_ns::
290 returned rather than pushed to self.shell.user_ns::
291
291
292 In [3]: dtype=[('x', '<i4'), ('y', '<f8'), ('z', '|S1')]
292 In [3]: dtype=[('x', '<i4'), ('y', '<f8'), ('z', '|S1')]
293
293
294 In [4]: datapy = np.array([(1, 2.9, 'a'), (2, 3.5, 'b'), (3, 2.1, 'c'), (4, 5, 'e')], dtype=dtype)
294 In [4]: datapy = np.array([(1, 2.9, 'a'), (2, 3.5, 'b'), (3, 2.1, 'c'), (4, 5, 'e')], dtype=dtype)
295
295
296 In [5]: %R -i datapy
296 In [5]: %R -i datapy
297
297
298 In [6]: %Rget datapy
298 In [6]: %Rget datapy
299 Out[6]:
299 Out[6]:
300 array([['1', '2', '3', '4'],
300 array([['1', '2', '3', '4'],
301 ['2', '3', '2', '5'],
301 ['2', '3', '2', '5'],
302 ['a', 'b', 'c', 'e']],
302 ['a', 'b', 'c', 'e']],
303 dtype='|S1')
303 dtype='|S1')
304
304
305 In [7]: %Rget -d datapy
305 In [7]: %Rget -d datapy
306 Out[7]:
306 Out[7]:
307 array([(1, 2.9, 'a'), (2, 3.5, 'b'), (3, 2.1, 'c'), (4, 5.0, 'e')],
307 array([(1, 2.9, 'a'), (2, 3.5, 'b'), (3, 2.1, 'c'), (4, 5.0, 'e')],
308 dtype=[('x', '<i4'), ('y', '<f8'), ('z', '|S1')])
308 dtype=[('x', '<i4'), ('y', '<f8'), ('z', '|S1')])
309
309
310 '''
310 '''
311 args = parse_argstring(self.Rget, line)
311 args = parse_argstring(self.Rget, line)
312 output = args.output
312 output = args.output
313 return self.Rconverter(self.r(output[0]),dataframe=args.as_dataframe)
313 return self.Rconverter(self.r(output[0]),dataframe=args.as_dataframe)
314
314
315
315
316 @skip_doctest
316 @skip_doctest
317 @magic_arguments()
317 @magic_arguments()
318 @argument(
318 @argument(
319 '-i', '--input', action='append',
319 '-i', '--input', action='append',
320 help='Names of input variable from shell.user_ns to be assigned to R variables of the same names after calling self.pyconverter. Multiple names can be passed separated only by commas with no whitespace.'
320 help='Names of input variable from shell.user_ns to be assigned to R variables of the same names after calling self.pyconverter. Multiple names can be passed separated only by commas with no whitespace.'
321 )
321 )
322 @argument(
322 @argument(
323 '-o', '--output', action='append',
323 '-o', '--output', action='append',
324 help='Names of variables to be pushed from rpy2 to shell.user_ns after executing cell body and applying self.Rconverter. Multiple names can be passed separated only by commas with no whitespace.'
324 help='Names of variables to be pushed from rpy2 to shell.user_ns after executing cell body and applying self.Rconverter. Multiple names can be passed separated only by commas with no whitespace.'
325 )
325 )
326 @argument(
326 @argument(
327 '-w', '--width', type=int,
327 '-w', '--width', type=int,
328 help='Width of png plotting device sent as an argument to *png* in R.'
328 help='Width of png plotting device sent as an argument to *png* in R.'
329 )
329 )
330 @argument(
330 @argument(
331 '-h', '--height', type=int,
331 '-h', '--height', type=int,
332 help='Height of png plotting device sent as an argument to *png* in R.'
332 help='Height of png plotting device sent as an argument to *png* in R.'
333 )
333 )
334
334
335 @argument(
335 @argument(
336 '-d', '--dataframe', action='append',
336 '-d', '--dataframe', action='append',
337 help='Convert these objects to data.frames and return as structured arrays.'
337 help='Convert these objects to data.frames and return as structured arrays.'
338 )
338 )
339 @argument(
339 @argument(
340 '-u', '--units', type=unicode, choices=["px", "in", "cm", "mm"],
340 '-u', '--units', type=unicode, choices=["px", "in", "cm", "mm"],
341 help='Units of png plotting device sent as an argument to *png* in R. One of ["px", "in", "cm", "mm"].'
341 help='Units of png plotting device sent as an argument to *png* in R. One of ["px", "in", "cm", "mm"].'
342 )
342 )
343 @argument(
343 @argument(
344 '-r', '--res', type=int,
344 '-r', '--res', type=int,
345 help='Resolution of png plotting device sent as an argument to *png* in R. Defaults to 72 if *units* is one of ["in", "cm", "mm"].'
345 help='Resolution of png plotting device sent as an argument to *png* in R. Defaults to 72 if *units* is one of ["in", "cm", "mm"].'
346 )
346 )
347 @argument(
347 @argument(
348 '-p', '--pointsize', type=int,
348 '-p', '--pointsize', type=int,
349 help='Pointsize of png plotting device sent as an argument to *png* in R.'
349 help='Pointsize of png plotting device sent as an argument to *png* in R.'
350 )
350 )
351 @argument(
351 @argument(
352 '-b', '--bg',
352 '-b', '--bg',
353 help='Background of png plotting device sent as an argument to *png* in R.'
353 help='Background of png plotting device sent as an argument to *png* in R.'
354 )
354 )
355 @argument(
355 @argument(
356 '-n', '--noreturn',
356 '-n', '--noreturn',
357 help='Force the magic to not return anything.',
357 help='Force the magic to not return anything.',
358 action='store_true',
358 action='store_true',
359 default=False
359 default=False
360 )
360 )
361 @argument(
361 @argument(
362 'code',
362 'code',
363 nargs='*',
363 nargs='*',
364 )
364 )
365 @needs_local_scope
365 @needs_local_scope
366 @line_cell_magic
366 @line_cell_magic
367 def R(self, line, cell=None, local_ns=None):
367 def R(self, line, cell=None, local_ns=None):
368 '''
368 '''
369 Execute code in R, and pull some of the results back into the Python namespace.
369 Execute code in R, and pull some of the results back into the Python namespace.
370
370
371 In line mode, this will evaluate an expression and convert the returned value to a Python object.
371 In line mode, this will evaluate an expression and convert the returned value to a Python object.
372 The return value is determined by rpy2's behaviour of returning the result of evaluating the
372 The return value is determined by rpy2's behaviour of returning the result of evaluating the
373 final line.
373 final line.
374
374
375 Multiple R lines can be executed by joining them with semicolons::
375 Multiple R lines can be executed by joining them with semicolons::
376
376
377 In [9]: %R X=c(1,4,5,7); sd(X); mean(X)
377 In [9]: %R X=c(1,4,5,7); sd(X); mean(X)
378 Out[9]: array([ 4.25])
378 Out[9]: array([ 4.25])
379
379
380 As a cell, this will run a block of R code, without bringing anything back by default::
380 As a cell, this will run a block of R code, without bringing anything back by default::
381
381
382 In [10]: %%R
382 In [10]: %%R
383 ....: Y = c(2,4,3,9)
383 ....: Y = c(2,4,3,9)
384 ....: print(summary(lm(Y~X)))
384 ....: print(summary(lm(Y~X)))
385 ....:
385 ....:
386
386
387 Call:
387 Call:
388 lm(formula = Y ~ X)
388 lm(formula = Y ~ X)
389
389
390 Residuals:
390 Residuals:
391 1 2 3 4
391 1 2 3 4
392 0.88 -0.24 -2.28 1.64
392 0.88 -0.24 -2.28 1.64
393
393
394 Coefficients:
394 Coefficients:
395 Estimate Std. Error t value Pr(>|t|)
395 Estimate Std. Error t value Pr(>|t|)
396 (Intercept) 0.0800 2.3000 0.035 0.975
396 (Intercept) 0.0800 2.3000 0.035 0.975
397 X 1.0400 0.4822 2.157 0.164
397 X 1.0400 0.4822 2.157 0.164
398
398
399 Residual standard error: 2.088 on 2 degrees of freedom
399 Residual standard error: 2.088 on 2 degrees of freedom
400 Multiple R-squared: 0.6993,Adjusted R-squared: 0.549
400 Multiple R-squared: 0.6993,Adjusted R-squared: 0.549
401 F-statistic: 4.651 on 1 and 2 DF, p-value: 0.1638
401 F-statistic: 4.651 on 1 and 2 DF, p-value: 0.1638
402
402
403 In the notebook, plots are published as the output of the cell.
403 In the notebook, plots are published as the output of the cell.
404
404
405 %R plot(X, Y)
405 %R plot(X, Y)
406
406
407 will create a scatter plot of X bs Y.
407 will create a scatter plot of X bs Y.
408
408
409 If cell is not None and line has some R code, it is prepended to
409 If cell is not None and line has some R code, it is prepended to
410 the R code in cell.
410 the R code in cell.
411
411
412 Objects can be passed back and forth between rpy2 and python via the -i -o flags in line::
412 Objects can be passed back and forth between rpy2 and python via the -i -o flags in line::
413
413
414 In [14]: Z = np.array([1,4,5,10])
414 In [14]: Z = np.array([1,4,5,10])
415
415
416 In [15]: %R -i Z mean(Z)
416 In [15]: %R -i Z mean(Z)
417 Out[15]: array([ 5.])
417 Out[15]: array([ 5.])
418
418
419
419
420 In [16]: %R -o W W=Z*mean(Z)
420 In [16]: %R -o W W=Z*mean(Z)
421 Out[16]: array([ 5., 20., 25., 50.])
421 Out[16]: array([ 5., 20., 25., 50.])
422
422
423 In [17]: W
423 In [17]: W
424 Out[17]: array([ 5., 20., 25., 50.])
424 Out[17]: array([ 5., 20., 25., 50.])
425
425
426 The return value is determined by these rules:
426 The return value is determined by these rules:
427
427
428 * If the cell is not None, the magic returns None.
428 * If the cell is not None, the magic returns None.
429
429
430 * If the cell evaluates as False, the resulting value is returned
430 * If the cell evaluates as False, the resulting value is returned
431 unless the final line prints something to the console, in
431 unless the final line prints something to the console, in
432 which case None is returned.
432 which case None is returned.
433
433
434 * If the final line results in a NULL value when evaluated
434 * If the final line results in a NULL value when evaluated
435 by rpy2, then None is returned.
435 by rpy2, then None is returned.
436
436
437 * No attempt is made to convert the final value to a structured array.
437 * No attempt is made to convert the final value to a structured array.
438 Use the --dataframe flag or %Rget to push / return a structured array.
438 Use the --dataframe flag or %Rget to push / return a structured array.
439
439
440 * If the -n flag is present, there is no return value.
440 * If the -n flag is present, there is no return value.
441
441
442 * A trailing ';' will also result in no return value as the last
442 * A trailing ';' will also result in no return value as the last
443 value in the line is an empty string.
443 value in the line is an empty string.
444
444
445 The --dataframe argument will attempt to return structured arrays.
445 The --dataframe argument will attempt to return structured arrays.
446 This is useful for dataframes with
446 This is useful for dataframes with
447 mixed data types. Note also that for a data.frame,
447 mixed data types. Note also that for a data.frame,
448 if it is returned as an ndarray, it is transposed::
448 if it is returned as an ndarray, it is transposed::
449
449
450 In [18]: dtype=[('x', '<i4'), ('y', '<f8'), ('z', '|S1')]
450 In [18]: dtype=[('x', '<i4'), ('y', '<f8'), ('z', '|S1')]
451
451
452 In [19]: datapy = np.array([(1, 2.9, 'a'), (2, 3.5, 'b'), (3, 2.1, 'c'), (4, 5, 'e')], dtype=dtype)
452 In [19]: datapy = np.array([(1, 2.9, 'a'), (2, 3.5, 'b'), (3, 2.1, 'c'), (4, 5, 'e')], dtype=dtype)
453
453
454 In [20]: %%R -o datar
454 In [20]: %%R -o datar
455 datar = datapy
455 datar = datapy
456 ....:
456 ....:
457
457
458 In [21]: datar
458 In [21]: datar
459 Out[21]:
459 Out[21]:
460 array([['1', '2', '3', '4'],
460 array([['1', '2', '3', '4'],
461 ['2', '3', '2', '5'],
461 ['2', '3', '2', '5'],
462 ['a', 'b', 'c', 'e']],
462 ['a', 'b', 'c', 'e']],
463 dtype='|S1')
463 dtype='|S1')
464
464
465 In [22]: %%R -d datar
465 In [22]: %%R -d datar
466 datar = datapy
466 datar = datapy
467 ....:
467 ....:
468
468
469 In [23]: datar
469 In [23]: datar
470 Out[23]:
470 Out[23]:
471 array([(1, 2.9, 'a'), (2, 3.5, 'b'), (3, 2.1, 'c'), (4, 5.0, 'e')],
471 array([(1, 2.9, 'a'), (2, 3.5, 'b'), (3, 2.1, 'c'), (4, 5.0, 'e')],
472 dtype=[('x', '<i4'), ('y', '<f8'), ('z', '|S1')])
472 dtype=[('x', '<i4'), ('y', '<f8'), ('z', '|S1')])
473
473
474 The --dataframe argument first tries colnames, then names.
474 The --dataframe argument first tries colnames, then names.
475 If both are NULL, it returns an ndarray (i.e. unstructured)::
475 If both are NULL, it returns an ndarray (i.e. unstructured)::
476
476
477 In [1]: %R mydata=c(4,6,8.3); NULL
477 In [1]: %R mydata=c(4,6,8.3); NULL
478
478
479 In [2]: %R -d mydata
479 In [2]: %R -d mydata
480
480
481 In [3]: mydata
481 In [3]: mydata
482 Out[3]: array([ 4. , 6. , 8.3])
482 Out[3]: array([ 4. , 6. , 8.3])
483
483
484 In [4]: %R names(mydata) = c('a','b','c'); NULL
484 In [4]: %R names(mydata) = c('a','b','c'); NULL
485
485
486 In [5]: %R -d mydata
486 In [5]: %R -d mydata
487
487
488 In [6]: mydata
488 In [6]: mydata
489 Out[6]:
489 Out[6]:
490 array((4.0, 6.0, 8.3),
490 array((4.0, 6.0, 8.3),
491 dtype=[('a', '<f8'), ('b', '<f8'), ('c', '<f8')])
491 dtype=[('a', '<f8'), ('b', '<f8'), ('c', '<f8')])
492
492
493 In [7]: %R -o mydata
493 In [7]: %R -o mydata
494
494
495 In [8]: mydata
495 In [8]: mydata
496 Out[8]: array([ 4. , 6. , 8.3])
496 Out[8]: array([ 4. , 6. , 8.3])
497
497
498 '''
498 '''
499
499
500 args = parse_argstring(self.R, line)
500 args = parse_argstring(self.R, line)
501
501
502 # arguments 'code' in line are prepended to
502 # arguments 'code' in line are prepended to
503 # the cell lines
503 # the cell lines
504
504
505 if cell is None:
505 if cell is None:
506 code = ''
506 code = ''
507 return_output = True
507 return_output = True
508 line_mode = True
508 line_mode = True
509 else:
509 else:
510 code = cell
510 code = cell
511 return_output = False
511 return_output = False
512 line_mode = False
512 line_mode = False
513
513
514 code = ' '.join(args.code) + code
514 code = ' '.join(args.code) + code
515
515
516 # if there is no local namespace then default to an empty dict
516 # if there is no local namespace then default to an empty dict
517 if local_ns is None:
517 if local_ns is None:
518 local_ns = {}
518 local_ns = {}
519
519
520 if args.input:
520 if args.input:
521 for input in ','.join(args.input).split(','):
521 for input in ','.join(args.input).split(','):
522 try:
522 try:
523 val = local_ns[input]
523 val = local_ns[input]
524 except KeyError:
524 except KeyError:
525 try:
525 try:
526 val = self.shell.user_ns[input]
526 val = self.shell.user_ns[input]
527 except KeyError:
527 except KeyError:
528 raise NameError("name '%s' is not defined" % input)
528 raise NameError("name '%s' is not defined" % input)
529 self.r.assign(input, self.pyconverter(val))
529 self.r.assign(input, self.pyconverter(val))
530
530
531 if getattr(args, 'units') is not None:
531 if getattr(args, 'units') is not None:
532 if args.units != "px" and getattr(args, 'res') is None:
532 if args.units != "px" and getattr(args, 'res') is None:
533 args.res = 72
533 args.res = 72
534 args.units = '"%s"' % args.units
534 args.units = '"%s"' % args.units
535
535
536 png_argdict = dict([(n, getattr(args, n)) for n in ['units', 'res', 'height', 'width', 'bg', 'pointsize']])
536 png_argdict = dict([(n, getattr(args, n)) for n in ['units', 'res', 'height', 'width', 'bg', 'pointsize']])
537 png_args = ','.join(['%s=%s' % (o,v) for o, v in png_argdict.items() if v is not None])
537 png_args = ','.join(['%s=%s' % (o,v) for o, v in png_argdict.items() if v is not None])
538 # execute the R code in a temporary directory
538 # execute the R code in a temporary directory
539
539
540 tmpd = tempfile.mkdtemp()
540 tmpd = tempfile.mkdtemp()
541 self.r('png("%s/Rplots%%03d.png",%s)' % (tmpd.replace('\\', '/'), png_args))
541 self.r('png("%s/Rplots%%03d.png",%s)' % (tmpd.replace('\\', '/'), png_args))
542
542
543 text_output = ''
543 text_output = ''
544 if line_mode:
544 if line_mode:
545 for line in code.split(';'):
545 for line in code.split(';'):
546 text_result, result = self.eval(line)
546 text_result, result = self.eval(line)
547 text_output += text_result
547 text_output += text_result
548 if text_result:
548 if text_result:
549 # the last line printed something to the console so we won't return it
549 # the last line printed something to the console so we won't return it
550 return_output = False
550 return_output = False
551 else:
551 else:
552 text_result, result = self.eval(code)
552 text_result, result = self.eval(code)
553 text_output += text_result
553 text_output += text_result
554
554
555 self.r('dev.off()')
555 self.r('dev.off()')
556
556
557 # read out all the saved .png files
557 # read out all the saved .png files
558
558
559 images = [open(imgfile, 'rb').read() for imgfile in glob("%s/Rplots*png" % tmpd)]
559 images = [open(imgfile, 'rb').read() for imgfile in glob("%s/Rplots*png" % tmpd)]
560
560
561 # now publish the images
561 # now publish the images
562 # mimicking IPython/zmq/pylab/backend_inline.py
562 # mimicking IPython/zmq/pylab/backend_inline.py
563 fmt = 'png'
563 fmt = 'png'
564 mimetypes = { 'png' : 'image/png', 'svg' : 'image/svg+xml' }
564 mimetypes = { 'png' : 'image/png', 'svg' : 'image/svg+xml' }
565 mime = mimetypes[fmt]
565 mime = mimetypes[fmt]
566
566
567 # publish the printed R objects, if any
567 # publish the printed R objects, if any
568
568
569 display_data = []
569 display_data = []
570 if text_output:
570 if text_output:
571 display_data.append(('RMagic.R', {'text/plain':text_output}))
571 display_data.append(('RMagic.R', {'text/plain':text_output}))
572
572
573 # flush text streams before sending figures, helps a little with output
573 # flush text streams before sending figures, helps a little with output
574 for image in images:
574 for image in images:
575 # synchronization in the console (though it's a bandaid, not a real sln)
575 # synchronization in the console (though it's a bandaid, not a real sln)
576 sys.stdout.flush(); sys.stderr.flush()
576 sys.stdout.flush(); sys.stderr.flush()
577 display_data.append(('RMagic.R', {mime: image}))
577 display_data.append(('RMagic.R', {mime: image}))
578
578
579 # kill the temporary directory
579 # kill the temporary directory
580 rmtree(tmpd)
580 rmtree(tmpd)
581
581
582 # try to turn every output into a numpy array
582 # try to turn every output into a numpy array
583 # this means that output are assumed to be castable
583 # this means that output are assumed to be castable
584 # as numpy arrays
584 # as numpy arrays
585
585
586 if args.output:
586 if args.output:
587 for output in ','.join(args.output).split(','):
587 for output in ','.join(args.output).split(','):
588 self.shell.push({output:self.Rconverter(self.r(output), dataframe=False)})
588 self.shell.push({output:self.Rconverter(self.r(output), dataframe=False)})
589
589
590 if args.dataframe:
590 if args.dataframe:
591 for output in ','.join(args.dataframe).split(','):
591 for output in ','.join(args.dataframe).split(','):
592 self.shell.push({output:self.Rconverter(self.r(output), dataframe=True)})
592 self.shell.push({output:self.Rconverter(self.r(output), dataframe=True)})
593
593
594 for tag, disp_d in display_data:
594 for tag, disp_d in display_data:
595 publish_display_data(tag, disp_d)
595 publish_display_data(tag, disp_d)
596
596
597 # this will keep a reference to the display_data
597 # this will keep a reference to the display_data
598 # which might be useful to other objects who happen to use
598 # which might be useful to other objects who happen to use
599 # this method
599 # this method
600
600
601 if self.cache_display_data:
601 if self.cache_display_data:
602 self.display_cache = display_data
602 self.display_cache = display_data
603
603
604 # if in line mode and return_output, return the result as an ndarray
604 # if in line mode and return_output, return the result as an ndarray
605 if return_output and not args.noreturn:
605 if return_output and not args.noreturn:
606 if result != ri.NULL:
606 if result != ri.NULL:
607 return self.Rconverter(result, dataframe=False)
607 return self.Rconverter(result, dataframe=False)
608
608
609 __doc__ = __doc__.format(
609 __doc__ = __doc__.format(
610 R_DOC = ' '*8 + RMagics.R.__doc__,
610 R_DOC = ' '*8 + RMagics.R.__doc__,
611 RPUSH_DOC = ' '*8 + RMagics.Rpush.__doc__,
611 RPUSH_DOC = ' '*8 + RMagics.Rpush.__doc__,
612 RPULL_DOC = ' '*8 + RMagics.Rpull.__doc__,
612 RPULL_DOC = ' '*8 + RMagics.Rpull.__doc__,
613 RGET_DOC = ' '*8 + RMagics.Rget.__doc__
613 RGET_DOC = ' '*8 + RMagics.Rget.__doc__
614 )
614 )
615
615
616
616
617 def load_ipython_extension(ip):
617 def load_ipython_extension(ip):
618 """Load the extension in IPython."""
618 """Load the extension in IPython."""
619 ip.register_magics(RMagics)
619 ip.register_magics(RMagics)
620 # Initialising rpy2 interferes with readline. Since, at this point, we've
621 # probably just loaded rpy2, we reset the delimiters. See issue gh-2759.
622 if ip.has_readline:
623 ip.readline.set_completer_delims(ip.readline_delims)
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