Fix padding of matplotlib figures, after much whining from Stefan :)

IPython/config/application.py

@@ -1,421 +1,421 b''
 # encoding: utf-8
 """
 A base class for a configurable application.
 
 Authors:
 
 * Brian Granger
 * Min RK
 """
 
 #-----------------------------------------------------------------------------
 #  Copyright (C) 2008-2011  The IPython Development Team
 #
 #  Distributed under the terms of the BSD License.  The full license is in
 #  the file COPYING, distributed as part of this software.
 #-----------------------------------------------------------------------------
 
 #-----------------------------------------------------------------------------
 # Imports
 #-----------------------------------------------------------------------------
 
 import logging
 import os
 import re
 import sys
 from copy import deepcopy
 
 from IPython.config.configurable import SingletonConfigurable
 from IPython.config.loader import (
     KeyValueConfigLoader, PyFileConfigLoader, Config, ArgumentError
 )
 
 from IPython.utils.traitlets import (
     Unicode, List, Int, Enum, Dict, Instance, TraitError
 )
 from IPython.utils.importstring import import_item
 from IPython.utils.text import indent, wrap_paragraphs, dedent
 
 #-----------------------------------------------------------------------------
 # function for re-wrapping a helpstring
 #-----------------------------------------------------------------------------
 
 #-----------------------------------------------------------------------------
 # Descriptions for the various sections
 #-----------------------------------------------------------------------------
 
 # merge flags&aliases into options
 option_description = """
 IPython command-line arguments are passed as '--<flag>', or '--<name>=<value>'.
 
-Arguments that take values are actually aliases to full Configurables, whose
-aliases are listed on the help line. For more information on full
-configurables, see '--help-all'.
+Arguments that take values are actually convenience aliases to full
+Configurables, whose aliases are listed on the help line. For more information
+on full configurables, see '--help-all'.
 """.strip() # trim newlines of front and back
 
 keyvalue_description = """
 Parameters are set from command-line arguments of the form:
 `--Class.trait=value`.
 This line is evaluated in Python, so simple expressions are allowed, e.g.::
 `--C.a='range(3)'` For setting C.a=[0,1,2].
 """.strip() # trim newlines of front and back
 
 subcommand_description = """
 Subcommands are launched as `{app} cmd [args]`. For information on using
 subcommand 'cmd', do: `{app} cmd -h`.
 """.strip().format(app=os.path.basename(sys.argv[0]))
 # get running program name
 
 #-----------------------------------------------------------------------------
 # Application class
 #-----------------------------------------------------------------------------
 
 
 class ApplicationError(Exception):
     pass
 
 
 class Application(SingletonConfigurable):
     """A singleton application with full configuration support."""
 
     # The name of the application, will usually match the name of the command
     # line application
     name = Unicode(u'application')
 
     # The description of the application that is printed at the beginning
     # of the help.
     description = Unicode(u'This is an application.')
     # default section descriptions
     option_description = Unicode(option_description)
     keyvalue_description = Unicode(keyvalue_description)
     subcommand_description = Unicode(subcommand_description)
 
     # The usage and example string that goes at the end of the help string.
     examples = Unicode()
 
     # A sequence of Configurable subclasses whose config=True attributes will
     # be exposed at the command line.
     classes = List([])
 
     # The version string of this application.
     version = Unicode(u'0.0')
 
     # The log level for the application
     log_level = Enum((0,10,20,30,40,50,'DEBUG','INFO','WARN','ERROR','CRITICAL'),
                     default_value=logging.WARN,
                     config=True,
                     help="Set the log level by value or name.")
     def _log_level_changed(self, name, old, new):
         """Adjust the log level when log_level is set."""
         if isinstance(new, basestring):
             new = getattr(logging, new)
             self.log_level = new
         self.log.setLevel(new)
     
     # the alias map for configurables
     aliases = Dict({'log-level' : 'Application.log_level'})
     
     # flags for loading Configurables or store_const style flags
     # flags are loaded from this dict by '--key' flags
     # this must be a dict of two-tuples, the first element being the Config/dict
     # and the second being the help string for the flag
     flags = Dict()
     def _flags_changed(self, name, old, new):
         """ensure flags dict is valid"""
         for key,value in new.iteritems():
             assert len(value) == 2, "Bad flag: %r:%s"%(key,value)
             assert isinstance(value[0], (dict, Config)), "Bad flag: %r:%s"%(key,value)
             assert isinstance(value[1], basestring), "Bad flag: %r:%s"%(key,value)
         
     
     # subcommands for launching other applications
     # if this is not empty, this will be a parent Application
     # this must be a dict of two-tuples, 
     # the first element being the application class/import string
     # and the second being the help string for the subcommand
     subcommands = Dict()
     # parse_command_line will initialize a subapp, if requested
     subapp = Instance('IPython.config.application.Application', allow_none=True)
     
     # extra command-line arguments that don't set config values
     extra_args = List(Unicode)
     
 
     def __init__(self, **kwargs):
         SingletonConfigurable.__init__(self, **kwargs)
         # Add my class to self.classes so my attributes appear in command line
         # options.
         self.classes.insert(0, self.__class__)
         
         self.init_logging()
 
     def _config_changed(self, name, old, new):
         SingletonConfigurable._config_changed(self, name, old, new)
         self.log.debug('Config changed:')
         self.log.debug(repr(new))
 
     def init_logging(self):
         """Start logging for this application.
 
         The default is to log to stdout using a StreaHandler. The log level
         starts at loggin.WARN, but this can be adjusted by setting the 
         ``log_level`` attribute.
         """
         self.log = logging.getLogger(self.__class__.__name__)
         self.log.setLevel(self.log_level)
         if sys.executable.endswith('pythonw.exe'):
             # this should really go to a file, but file-logging is only
             # hooked up in parallel applications
             self._log_handler = logging.StreamHandler(open(os.devnull, 'w'))
         else:
             self._log_handler = logging.StreamHandler()
         self._log_formatter = logging.Formatter("[%(name)s] %(message)s")
         self._log_handler.setFormatter(self._log_formatter)
         self.log.addHandler(self._log_handler)
 
     def initialize(self, argv=None):
         """Do the basic steps to configure me.
         
         Override in subclasses.
         """
         self.parse_command_line(argv)
         
     
     def start(self):
         """Start the app mainloop.
         
         Override in subclasses.
         """
         if self.subapp is not None:
             return self.subapp.start()
     
     def print_alias_help(self):
         """Print the alias part of the help."""
         if not self.aliases:
             return
         
         lines = []
         classdict = {}
         for cls in self.classes:
             # include all parents (up to, but excluding Configurable) in available names
             for c in cls.mro()[:-3]:
                 classdict[c.__name__] = c
         
         for alias, longname in self.aliases.iteritems():
             classname, traitname = longname.split('.',1)
             cls = classdict[classname]
             
             trait = cls.class_traits(config=True)[traitname]
             help = cls.class_get_trait_help(trait).splitlines()
             # reformat first line
             help[0] = help[0].replace(longname, alias) + ' (%s)'%longname
             lines.extend(help)
         # lines.append('')
         print os.linesep.join(lines)
     
     def print_flag_help(self):
         """Print the flag part of the help."""
         if not self.flags:
             return
         
         lines = []
         for m, (cfg,help) in self.flags.iteritems():
             lines.append('--'+m)
             lines.append(indent(dedent(help.strip())))
         # lines.append('')
         print os.linesep.join(lines)
     
     def print_options(self):
         if not self.flags and not self.aliases:
             return
         lines = ['Options']
         lines.append('-'*len(lines[0]))
         lines.append('')
         for p in wrap_paragraphs(self.option_description):
             lines.append(p)
             lines.append('')
         print os.linesep.join(lines)
         self.print_flag_help()
         self.print_alias_help()
         print
     
     def print_subcommands(self):
         """Print the subcommand part of the help."""
         if not self.subcommands:
             return
         
         lines = ["Subcommands"]
         lines.append('-'*len(lines[0]))
         lines.append('')
         for p in wrap_paragraphs(self.subcommand_description):
             lines.append(p)
             lines.append('')
-        for subc, (cls,help) in self.subcommands.iteritems():
-            lines.append("%s : %s"%(subc, cls))
+        for subc, (cls, help) in self.subcommands.iteritems():
+            lines.append(subc)
             if help:
                 lines.append(indent(dedent(help.strip())))
         lines.append('')
         print os.linesep.join(lines)
     
     def print_help(self, classes=False):
         """Print the help for each Configurable class in self.classes.
         
         If classes=False (the default), only flags and aliases are printed.
         """
         self.print_subcommands()
         self.print_options()
         
         if classes:
             if self.classes:
                 print "Class parameters"
                 print "----------------"
                 print
                 for p in wrap_paragraphs(self.keyvalue_description):
                     print p
                     print
         
             for cls in self.classes:
                 cls.class_print_help()
                 print
         else:
             print "To see all available configurables, use `--help-all`"
             print
 
     def print_description(self):
         """Print the application description."""
         for p in wrap_paragraphs(self.description):
             print p
             print
 
     def print_examples(self):
         """Print usage and examples.
 
         This usage string goes at the end of the command line help string
         and should contain examples of the application's usage.
         """
         if self.examples:
             print "Examples"
             print "--------"
             print
             print indent(dedent(self.examples.strip()))
             print
 
     def print_version(self):
         """Print the version string."""
         print self.version
 
     def update_config(self, config):
         """Fire the traits events when the config is updated."""
         # Save a copy of the current config.
         newconfig = deepcopy(self.config)
         # Merge the new config into the current one.
         newconfig._merge(config)
         # Save the combined config as self.config, which triggers the traits
         # events.
         self.config = newconfig
     
     def initialize_subcommand(self, subc, argv=None):
         """Initialize a subcommand with argv."""
         subapp,help = self.subcommands.get(subc)
         
         if isinstance(subapp, basestring):
             subapp = import_item(subapp)
         
         # clear existing instances
         self.__class__.clear_instance()
         # instantiate
         self.subapp = subapp.instance()
         # and initialize subapp
         self.subapp.initialize(argv)
         
     def parse_command_line(self, argv=None):
         """Parse the command line arguments."""
         argv = sys.argv[1:] if argv is None else argv
 
         if self.subcommands and len(argv) > 0:
             # we have subcommands, and one may have been specified
             subc, subargv = argv[0], argv[1:]
             if re.match(r'^\w(\-?\w)*$', subc) and subc in self.subcommands:
                 # it's a subcommand, and *not* a flag or class parameter
                 return self.initialize_subcommand(subc, subargv)
             
         if '-h' in argv or '--help' in argv or '--help-all' in argv:
             self.print_description()
             self.print_help('--help-all' in argv)
             self.print_examples()
             self.exit(0)
 
         if '--version' in argv:
             self.print_version()
             self.exit(0)
         
         loader = KeyValueConfigLoader(argv=argv, aliases=self.aliases,
                                         flags=self.flags)
         try:
             config = loader.load_config()
             self.update_config(config)
         except (TraitError, ArgumentError) as e:
             self.print_description()
             self.print_help()
             self.print_examples()
             self.log.fatal(str(e))
             self.exit(1)
         # store unparsed args in extra_args
         self.extra_args = loader.extra_args
 
     def load_config_file(self, filename, path=None):
         """Load a .py based config file by filename and path."""
         loader = PyFileConfigLoader(filename, path=path)
         config = loader.load_config()
         self.update_config(config)
     
     def generate_config_file(self):
         """generate default config file from Configurables"""
         lines = ["# Configuration file for %s."%self.name]
         lines.append('')
         lines.append('c = get_config()')
         lines.append('')
         for cls in self.classes:
             lines.append(cls.class_config_section())
         return '\n'.join(lines)
 
     def exit(self, exit_status=0):
         self.log.debug("Exiting application: %s" % self.name)
         sys.exit(exit_status)
 
 #-----------------------------------------------------------------------------
 # utility functions, for convenience
 #-----------------------------------------------------------------------------
 
 def boolean_flag(name, configurable, set_help='', unset_help=''):
     """Helper for building basic --trait, --no-trait flags.
     
     Parameters
     ----------
     
     name : str
         The name of the flag.
     configurable : str
         The 'Class.trait' string of the trait to be set/unset with the flag
     set_help : unicode
         help string for --name flag
     unset_help : unicode
         help string for --no-name flag
     
     Returns
     -------
     
     cfg : dict
         A dict with two keys: 'name', and 'no-name', for setting and unsetting
         the trait, respectively.
     """
     # default helpstrings
     set_help = set_help or "set %s=True"%configurable
     unset_help = unset_help or "set %s=False"%configurable
     
     cls,trait = configurable.split('.')
     
     setter = {cls : {trait : True}}
     unsetter = {cls : {trait : False}}
     return {name : (setter, set_help), 'no-'+name : (unsetter, unset_help)}
 

IPython/core/usage.py

@@ -1,516 +1,525 b''
 # -*- coding: utf-8 -*-
 """Usage information for the main IPython applications.
 """
 #-----------------------------------------------------------------------------
 #  Copyright (C) 2008-2010  The IPython Development Team
 #  Copyright (C) 2001-2007 Fernando Perez. <[e-mail]>
 #
 #  Distributed under the terms of the BSD License.  The full license is in
 #  the file COPYING, distributed as part of this software.
 #-----------------------------------------------------------------------------
 
 import sys
 from IPython.core import release
 
 cl_usage = """\
-ipython [options] [files]
+=========
+ IPython
+=========
 
-IPython: an enhanced interactive Python shell.
+Tools for Interactive Computing in Python
+=========================================
 
     A Python shell with automatic history (input and output), dynamic object
     introspection, easier configuration, command completion, access to the
     system shell and more.  IPython can also be embedded in running programs.
 
+
+Usage
+-----
+
+    ipython [subcommand] [options] [files]
+
     If invoked with no options, it executes all the files listed in sequence
     and exits, use -i to enter interactive mode after running the files.  Files
     ending in .py will be treated as normal Python, but files ending in .ipy
     can contain special IPython syntax (magic commands, shell expansions, etc.)
 
     Almost all configuration in IPython is available via the command-line. Do
     `ipython --help-all` to see all available options.  For persistent
-    configuration, Look into your ipython_config.py configuration file for 
+    configuration, look into your `ipython_config.py` configuration file for 
     details.
 
-    This file is typically installed in the IPYTHON_DIR directory, and there
+    This file is typically installed in the `IPYTHON_DIR` directory, and there
     is a separate configuration directory for each profile. The default profile
-    directory will be located in $IPYTHON_DIR/profile_default. For Linux
-    users, IPYTHON_DIR will be $HOME/.config/ipython, and for other users it will be
-    $HOME/.ipython.  For Windows users, $HOME resolves to C:\\Documents and
-    Settings\\YourUserName in most instances.
+    directory will be located in $IPYTHON_DIR/profile_default. For Linux users,
+    IPYTHON_DIR defaults to `$HOME/.config/ipython`, and for other Unix systems
+    to `$HOME/.ipython`.  For Windows users, $HOME resolves to C:\\Documents
+    and Settings\\YourUserName in most instances.
     
-    To initialize a profile with the default configuration file, do:
+    To initialize a profile with the default configuration file, do::
     
       $> ipython profile create
     
-    and start editing IPYTHON_DIR/profile_default/ipython_config.py
+    and start editing `IPYTHON_DIR/profile_default/ipython_config.py`
 
-    In IPython's documentation, we will refer to this directory as IPYTHON_DIR,
-    you can change its default location by setting any path you want in this
-    environment variable.
+    In IPython's documentation, we will refer to this directory as
+    `IPYTHON_DIR`, you can change its default location by creating an
+    environment variable with this name and setting it to the desired path.
 
     For more information, see the manual available in HTML and PDF in your
     installation, or online at http://ipython.org/documentation.html.
 """
 
 interactive_usage = """
 IPython -- An enhanced Interactive Python
 =========================================
 
 IPython offers a combination of convenient shell features, special commands
 and a history mechanism for both input (command history) and output (results
 caching, similar to Mathematica). It is intended to be a fully compatible
 replacement for the standard Python interpreter, while offering vastly
 improved functionality and flexibility.
 
 At your system command line, type 'ipython -h' to see the command line
 options available. This document only describes interactive features.
 
 MAIN FEATURES
 
 * Access to the standard Python help. As of Python 2.1, a help system is
   available with access to object docstrings and the Python manuals. Simply
   type 'help' (no quotes) to access it.
 
 * Magic commands: type %magic for information on the magic subsystem.
 
 * System command aliases, via the %alias command or the ipythonrc config file.
 
 * Dynamic object information:
 
   Typing ?word or word? prints detailed information about an object.  If
   certain strings in the object are too long (docstrings, code, etc.) they get
   snipped in the center for brevity.
 
   Typing ??word or word?? gives access to the full information without
   snipping long strings. Long strings are sent to the screen through the less
   pager if longer than the screen, printed otherwise.
 
   The ?/?? system gives access to the full source code for any object (if
   available), shows function prototypes and other useful information.
 
   If you just want to see an object's docstring, type '%pdoc object' (without
   quotes, and without % if you have automagic on).
 
   Both %pdoc and ?/?? give you access to documentation even on things which are
   not explicitely defined. Try for example typing {}.get? or after import os,
   type os.path.abspath??. The magic functions %pdef, %source and %file operate
   similarly.
 
 * Completion in the local namespace, by typing TAB at the prompt.
 
   At any time, hitting tab will complete any available python commands or
   variable names, and show you a list of the possible completions if there's
   no unambiguous one. It will also complete filenames in the current directory.
 
   This feature requires the readline and rlcomplete modules, so it won't work
   if your Python lacks readline support (such as under Windows).
 
 * Search previous command history in two ways (also requires readline):
 
   - Start typing, and then use Ctrl-p (previous,up) and Ctrl-n (next,down) to
   search through only the history items that match what you've typed so
   far. If you use Ctrl-p/Ctrl-n at a blank prompt, they just behave like
   normal arrow keys.
 
   - Hit Ctrl-r: opens a search prompt. Begin typing and the system searches
   your history for lines that match what you've typed so far, completing as
   much as it can.
 
   - %hist: search history by index (this does *not* require readline).
 
 * Persistent command history across sessions.
 
 * Logging of input with the ability to save and restore a working session.
   
 * System escape with !. Typing !ls will run 'ls' in the current directory.
 
 * The reload command does a 'deep' reload of a module: changes made to the
   module since you imported will actually be available without having to exit.
 
 * Verbose and colored exception traceback printouts. See the magic xmode and
   xcolor functions for details (just type %magic).
 
 * Input caching system:
 
   IPython offers numbered prompts (In/Out) with input and output caching. All
   input is saved and can be retrieved as variables (besides the usual arrow
   key recall).
 
   The following GLOBAL variables always exist (so don't overwrite them!):
   _i: stores previous input.
   _ii: next previous.
   _iii: next-next previous.
   _ih : a list of all input _ih[n] is the input from line n.
 
   Additionally, global variables named _i<n> are dynamically created (<n>
   being the prompt counter), such that _i<n> == _ih[<n>]
 
   For example, what you typed at prompt 14 is available as _i14 and _ih[14].
 
   You can create macros which contain multiple input lines from this history,
   for later re-execution, with the %macro function.
 
   The history function %hist allows you to see any part of your input history
   by printing a range of the _i variables. Note that inputs which contain
   magic functions (%) appear in the history with a prepended comment. This is
   because they aren't really valid Python code, so you can't exec them.
 
 * Output caching system:
 
   For output that is returned from actions, a system similar to the input
   cache exists but using _ instead of _i. Only actions that produce a result
   (NOT assignments, for example) are cached. If you are familiar with
   Mathematica, IPython's _ variables behave exactly like Mathematica's %
   variables.
 
   The following GLOBAL variables always exist (so don't overwrite them!):
   _ (one underscore): previous output.
   __ (two underscores): next previous.
   ___ (three underscores): next-next previous.
 
   Global variables named _<n> are dynamically created (<n> being the prompt
   counter), such that the result of output <n> is always available as _<n>.
 
   Finally, a global dictionary named _oh exists with entries for all lines
   which generated output.
 
 * Directory history:
 
   Your history of visited directories is kept in the global list _dh, and the
   magic %cd command can be used to go to any entry in that list.
 
 * Auto-parentheses and auto-quotes (adapted from Nathan Gray's LazyPython)
 
     1. Auto-parentheses
         Callable objects (i.e. functions, methods, etc) can be invoked like
         this (notice the commas between the arguments):
             >>> callable_ob arg1, arg2, arg3
         and the input will be translated to this:
             --> callable_ob(arg1, arg2, arg3)
         You can force auto-parentheses by using '/' as the first character
         of a line.  For example:
             >>> /globals             # becomes 'globals()'
         Note that the '/' MUST be the first character on the line!  This
         won't work:
             >>> print /globals    # syntax error
             
         In most cases the automatic algorithm should work, so you should
         rarely need to explicitly invoke /. One notable exception is if you
         are trying to call a function with a list of tuples as arguments (the
         parenthesis will confuse IPython):
             In [1]: zip (1,2,3),(4,5,6)  # won't work
         but this will work:
             In [2]: /zip (1,2,3),(4,5,6)
             ------> zip ((1,2,3),(4,5,6))
             Out[2]= [(1, 4), (2, 5), (3, 6)]        
 
         IPython tells you that it has altered your command line by
         displaying the new command line preceded by -->.  e.g.:
             In [18]: callable list
             -------> callable (list) 
 
     2. Auto-Quoting
         You can force auto-quoting of a function's arguments by using ',' as
         the first character of a line.  For example:
             >>> ,my_function /home/me   # becomes my_function("/home/me")
 
         If you use ';' instead, the whole argument is quoted as a single
         string (while ',' splits on whitespace):
             >>> ,my_function a b c   # becomes my_function("a","b","c")
             >>> ;my_function a b c   # becomes my_function("a b c")
 
         Note that the ',' MUST be the first character on the line!  This
         won't work:
             >>> x = ,my_function /home/me    # syntax error
 """
 
 interactive_usage_min =  """\
 An enhanced console for Python.
 Some of its features are:
 - Readline support if the readline library is present.
 - Tab completion in the local namespace.
 - Logging of input, see command-line options.
 - System shell escape via ! , eg !ls.
 - Magic commands, starting with a % (like %ls, %pwd, %cd, etc.)
 - Keeps track of locally defined variables via %who, %whos.
 - Show object information with a ? eg ?x or x? (use ?? for more info).
 """
 
 quick_reference = r"""
 IPython -- An enhanced Interactive Python - Quick Reference Card
 ================================================================
 
 obj?, obj??      : Get help, or more help for object (also works as
                    ?obj, ??obj).
 ?foo.*abc*       : List names in 'foo' containing 'abc' in them.
 %magic           : Information about IPython's 'magic' % functions.
 
 Magic functions are prefixed by %, and typically take their arguments without
 parentheses, quotes or even commas for convenience.
  
 Example magic function calls:
 
 %alias d ls -F   : 'd' is now an alias for 'ls -F'
 alias d ls -F    : Works if 'alias' not a python name
 alist = %alias   : Get list of aliases to 'alist'
 cd /usr/share    : Obvious. cd -<tab> to choose from visited dirs.
 %cd??            : See help AND source for magic %cd
 
 System commands:
     
 !cp a.txt b/     : System command escape, calls os.system()
 cp a.txt b/      : after %rehashx, most system commands work without !
 cp ${f}.txt $bar : Variable expansion in magics and system commands
 files = !ls /usr : Capture sytem command output
 files.s, files.l, files.n: "a b c", ['a','b','c'], 'a\nb\nc'
 
 History:
 
 _i, _ii, _iii    : Previous, next previous, next next previous input
 _i4, _ih[2:5]    : Input history line 4, lines 2-4
 exec _i81        : Execute input history line #81 again
 %rep 81          : Edit input history line #81        
 _, __, ___       : previous, next previous, next next previous output
 _dh              : Directory history
 _oh              : Output history
 %hist            : Command history. '%hist -g foo' search history for 'foo'
 
 Autocall:
 
 f 1,2            : f(1,2)
 /f 1,2           : f(1,2) (forced autoparen)
 ,f 1 2           : f("1","2")
 ;f 1 2           : f("1 2")
 
 Remember: TAB completion works in many contexts, not just file names
 or python names.
 
 The following magic functions are currently available:
 
 """
 
 gui_reference = """\
 ===============================
  The graphical IPython console
 ===============================
 
 This console is designed to emulate the look, feel and workflow of a terminal
 environment, while adding a number of enhancements that are simply not possible
 in a real terminal, such as inline syntax highlighting, true multiline editing,
 inline graphics and much more.
 
 This quick reference document contains the basic information you'll need to
 know to make the most efficient use of it.  For the various command line
 options available at startup, type ``ipython qtconsole --help`` at the command line.
 
 
 Multiline editing
 =================
 
 The graphical console is capable of true multiline editing, but it also tries
 to behave intuitively like a terminal when possible.  If you are used to
 IPyhton's old terminal behavior, you should find the transition painless, and
 once you learn a few basic keybindings it will be a much more efficient
 environment.
 
 For single expressions or indented blocks, the console behaves almost like the
 terminal IPython: single expressions are immediately evaluated, and indented
 blocks are evaluated once a single blank line is entered::
 
     In [1]: print "Hello IPython!"  # Enter was pressed at the end of the line
     Hello IPython!
     
     In [2]: for i in range(10):
        ...: 	print i,
        ...: 	
     0 1 2 3 4 5 6 7 8 9
 
 If you want to enter more than one expression in a single input block
 (something not possible in the terminal), you can use ``Control-Enter`` at the
 end of your first line instead of ``Enter``.  At that point the console goes
 into 'cell mode' and even if your inputs are not indented, it will continue
 accepting arbitrarily many lines until either you enter an extra blank line or
 you hit ``Shift-Enter`` (the key binding that forces execution).  When a
 multiline cell is entered, IPython analyzes it and executes its code producing
 an ``Out[n]`` prompt only for the last expression in it, while the rest of the
 cell is executed as if it was a script.  An example should clarify this::
 
     In [3]: x=1  # Hit C-Enter here
        ...: y=2  # from now on, regular Enter is sufficient
        ...: z=3
        ...: x**2  # This does *not* produce an Out[] value
        ...: x+y+z  # Only the last expression does
        ...: 
     Out[3]: 6
 
 The behavior where an extra blank line forces execution is only active if you
 are actually typing at the keyboard each line, and is meant to make it mimic
 the IPython terminal behavior.  If you paste a long chunk of input (for example
 a long script copied form an editor or web browser), it can contain arbitrarily
 many intermediate blank lines and they won't cause any problems.  As always,
 you can then make it execute by appending a blank line *at the end* or hitting
 ``Shift-Enter`` anywhere within the cell.
 
 With the up arrow key, you can retrieve previous blocks of input that contain
 multiple lines.  You can move inside of a multiline cell like you would in any
 text editor.  When you want it executed, the simplest thing to do is to hit the
 force execution key, ``Shift-Enter`` (though you can also navigate to the end
 and append a blank line by using ``Enter`` twice).
 
 If you've edited a multiline cell and accidentally navigate out of it with the
 up or down arrow keys, IPython will clear the cell and replace it with the
 contents of the one above or below that you navigated to.  If this was an
 accident and you want to retrieve the cell you were editing, use the Undo
 keybinding, ``Control-z``.
 
 
 Key bindings
 ============
 
 The IPython console supports most of the basic Emacs line-oriented keybindings,
 in addition to some of its own.
 
 The keybinding prefixes mean:
 
 - ``C``: Control
 - ``S``: Shift
 - ``M``: Meta (typically the Alt key)
 
 The keybindings themselves are:
 
 - ``Enter``: insert new line (may cause execution, see above).
 - ``C-Enter``: force new line, *never* causes execution.
 - ``S-Enter``: *force* execution regardless of where cursor is, no newline added.
 - ``C-c``: copy highlighted text to clipboard (prompts are automatically stripped).
 - ``C-S-c``: copy highlighted text to clipboard (prompts are not stripped).
 - ``C-v``: paste text from clipboard.
 - ``C-z``: undo (retrieves lost text if you move out of a cell with the arrows).
 - ``C-S-z``: redo.
 - ``C-o``: move to 'other' area, between pager and terminal.
 - ``C-l``: clear terminal.
 - ``C-a``: go to beginning of line.
 - ``C-e``: go to end of line.
 - ``C-k``: kill from cursor to the end of the line.
 - ``C-y``: yank (paste)
 - ``C-p``: previous line (like up arrow)
 - ``C-n``: next line (like down arrow)
 - ``C-f``: forward (like right arrow)
 - ``C-b``: back (like left arrow)
 - ``C-d``: delete next character.
 - ``M-<``: move to the beginning of the input region.
 - ``M->``: move to the end of the input region.
 - ``M-d``: delete next word.
 - ``M-Backspace``: delete previous word.
 - ``C-.``: force a kernel restart (a confirmation dialog appears).
 - ``C-+``: increase font size.
 - ``C--``: decrease font size.
 
 The IPython pager
 =================
 
 IPython will show long blocks of text from many sources using a builtin pager.
 You can control where this pager appears with the ``--paging`` command-line
 flag:
 
 - ``inside`` [default]: the pager is overlaid on top of the main terminal. You
   must quit the pager to get back to the terminal (similar to how a pager such
   as ``less`` or ``more`` works).
 
 - ``vsplit``: the console is made double-tall, and the pager appears on the
   bottom area when needed.  You can view its contents while using the terminal.
 
 - ``hsplit``: the console is made double-wide, and the pager appears on the
   right area when needed.  You can view its contents while using the terminal.
 
 - ``none``: the console never pages output.
 
 If you use the vertical or horizontal paging modes, you can navigate between
 terminal and pager as follows:
 
 - Tab key: goes from pager to terminal (but not the other way around).
 - Control-o: goes from one to another always.
 - Mouse: click on either.
 
 In all cases, the ``q`` or ``Escape`` keys quit the pager (when used with the
 focus on the pager area).
 
 Running subprocesses
 ====================
 
 The graphical IPython console uses the ``pexpect`` module to run subprocesses
 when you type ``!command``.  This has a number of advantages (true asynchronous
 output from subprocesses as well as very robust termination of rogue
 subprocesses with ``Control-C``), as well as some limitations.  The main
 limitation is that you can *not* interact back with the subprocess, so anything
 that invokes a pager or expects you to type input into it will block and hang
 (you can kill it with ``Control-C``).
 
 We have provided as magics ``%less`` to page files (aliased to ``%more``),
 ``%clear`` to clear the terminal, and ``%man`` on Linux/OSX.  These cover the
 most common commands you'd want to call in your subshell and that would cause
 problems if invoked via ``!cmd``, but you need to be aware of this limitation.
 
 Display
 =======
 
 The IPython console can now display objects in a variety of formats, including
 HTML, PNG and SVG. This is accomplished using the display functions in
 ``IPython.core.display``::
 
     In [4]: from IPython.core.display import display, display_html
 
     In [5]: from IPython.core.display import display_png, display_svg
 
 Python objects can simply be passed to these functions and the appropriate
 representations will be displayed in the console as long as the objects know
 how to compute those representations. The easiest way of teaching objects how
 to format themselves in various representations is to define special methods
 such as: ``_repr_html_``, ``_repr_svg_`` and ``_repr_png_``. IPython's display formatters
 can also be given custom formatter functions for various types::
 
     In [6]: ip = get_ipython()
 
     In [7]: html_formatter = ip.display_formatter.formatters['text/html']
 
     In [8]: html_formatter.for_type(Foo, foo_to_html)
 
 For further details, see ``IPython.core.formatters``.
 
 Inline matplotlib graphics
 ==========================
 
 The IPython console is capable of displaying matplotlib figures inline, in SVG
 or PNG format.  If started with the ``pylab=inline``, then all figures are
 rendered inline automatically (PNG by default).  If started with ``--pylab``
 or ``pylab=<your backend>``, then a GUI backend will be used, but IPython's
 ``display()`` and ``getfigs()`` functions can be used to view plots inline::
 
     In [9]: display(*getfigs())    # display all figures inline
 
     In[10]: display(*getfigs(1,2)) # display figures 1 and 2 inline
 """
 
 
 quick_guide = """\
 ?         -> Introduction and overview of IPython's features.
 %quickref -> Quick reference.
 help      -> Python's own help system.
 object?   -> Details about 'object', use 'object??' for extra details.
 """
 
 gui_note = """\
 %guiref   -> A brief reference about the graphical user interface.
 """
 
 default_banner_parts = [
     'Python %s\n' % (sys.version.split('\n')[0],),
     'Type "copyright", "credits" or "license" for more information.\n\n',
     'IPython %s -- An enhanced Interactive Python.\n' % (release.version,),
     quick_guide
 ]
 
 default_gui_banner_parts = default_banner_parts + [gui_note]
 
 default_banner = ''.join(default_banner_parts)
 
 default_gui_banner = ''.join(default_gui_banner_parts)

IPython/frontend/terminal/embed.py

@@ -1,247 +1,246 b''
-#!/usr/bin/env python
 # encoding: utf-8
 """
 An embedded IPython shell.
 
 Authors:
 
 * Brian Granger
 * Fernando Perez
 
 Notes
 -----
 """
 
 #-----------------------------------------------------------------------------
 #  Copyright (C) 2008-2009  The IPython Development Team
 #
 #  Distributed under the terms of the BSD License.  The full license is in
 #  the file COPYING, distributed as part of this software.
 #-----------------------------------------------------------------------------
 
 #-----------------------------------------------------------------------------
 # Imports
 #-----------------------------------------------------------------------------
 
 from __future__ import with_statement
 import __main__
 
 import sys
 from contextlib import nested
 
 from IPython.core import ultratb
 from IPython.frontend.terminal.interactiveshell import TerminalInteractiveShell
 from IPython.frontend.terminal.ipapp import load_default_config
 
 from IPython.utils.traitlets import Bool, CBool, Unicode
 from IPython.utils.io import ask_yes_no
 
 
 #-----------------------------------------------------------------------------
 # Classes and functions
 #-----------------------------------------------------------------------------
 
 # This is an additional magic that is exposed in embedded shells.
 def kill_embedded(self,parameter_s=''):
     """%kill_embedded : deactivate for good the current embedded IPython.
 
     This function (after asking for confirmation) sets an internal flag so that
     an embedded IPython will never activate again.  This is useful to
     permanently disable a shell that is being called inside a loop: once you've
     figured out what you needed from it, you may then kill it and the program
     will then continue to run without the interactive shell interfering again.
     """
     
     kill = ask_yes_no("Are you sure you want to kill this embedded instance "
                      "(y/n)? [y/N] ",'n')
     if kill:
         self.embedded_active = False
         print "This embedded IPython will not reactivate anymore once you exit."
 
 
 class InteractiveShellEmbed(TerminalInteractiveShell):
 
     dummy_mode = Bool(False)
     exit_msg = Unicode('')
     embedded = CBool(True)
     embedded_active = CBool(True)
     # Like the base class display_banner is not configurable, but here it
     # is True by default.
     display_banner = CBool(True)
 
     def __init__(self, config=None, ipython_dir=None, user_ns=None,
                  user_global_ns=None, custom_exceptions=((),None),
                  usage=None, banner1=None, banner2=None,
                  display_banner=None, exit_msg=u''):
 
         super(InteractiveShellEmbed,self).__init__(
             config=config, ipython_dir=ipython_dir, user_ns=user_ns,
             user_global_ns=user_global_ns, custom_exceptions=custom_exceptions,
             usage=usage, banner1=banner1, banner2=banner2,
             display_banner=display_banner
         )
 
         self.exit_msg = exit_msg
         self.define_magic("kill_embedded", kill_embedded)
 
         # don't use the ipython crash handler so that user exceptions aren't
         # trapped
         sys.excepthook = ultratb.FormattedTB(color_scheme=self.colors,
                                              mode=self.xmode,
                                              call_pdb=self.pdb)
 
     def init_sys_modules(self):
         pass
 
     def __call__(self, header='', local_ns=None, global_ns=None, dummy=None,
                  stack_depth=1):
         """Activate the interactive interpreter.
 
         __call__(self,header='',local_ns=None,global_ns,dummy=None) -> Start
         the interpreter shell with the given local and global namespaces, and
         optionally print a header string at startup.
 
         The shell can be globally activated/deactivated using the
         set/get_dummy_mode methods. This allows you to turn off a shell used
         for debugging globally.
 
         However, *each* time you call the shell you can override the current
         state of dummy_mode with the optional keyword parameter 'dummy'. For
         example, if you set dummy mode on with IPShell.set_dummy_mode(1), you
         can still have a specific call work by making it as IPShell(dummy=0).
 
         The optional keyword parameter dummy controls whether the call
         actually does anything.
         """
 
         # If the user has turned it off, go away
         if not self.embedded_active:
             return
 
         # Normal exits from interactive mode set this flag, so the shell can't
         # re-enter (it checks this variable at the start of interactive mode).
         self.exit_now = False
 
         # Allow the dummy parameter to override the global __dummy_mode
         if dummy or (dummy != 0 and self.dummy_mode):
             return
 
         if self.has_readline:
             self.set_readline_completer()
 
         # self.banner is auto computed
         if header:
             self.old_banner2 = self.banner2
             self.banner2 = self.banner2 + '\n' + header + '\n'
         else:
             self.old_banner2 = ''
 
         # Call the embedding code with a stack depth of 1 so it can skip over
         # our call and get the original caller's namespaces.
         self.mainloop(local_ns, global_ns, stack_depth=stack_depth)
 
         self.banner2 = self.old_banner2
 
         if self.exit_msg is not None:
             print self.exit_msg
 
     def mainloop(self, local_ns=None, global_ns=None, stack_depth=0,
                  display_banner=None):
         """Embeds IPython into a running python program.
 
         Input:
 
           - header: An optional header message can be specified.
 
           - local_ns, global_ns: working namespaces. If given as None, the
           IPython-initialized one is updated with __main__.__dict__, so that
           program variables become visible but user-specific configuration
           remains possible.
 
           - stack_depth: specifies how many levels in the stack to go to
           looking for namespaces (when local_ns and global_ns are None).  This
           allows an intermediate caller to make sure that this function gets
           the namespace from the intended level in the stack.  By default (0)
           it will get its locals and globals from the immediate caller.
 
         Warning: it's possible to use this in a program which is being run by
         IPython itself (via %run), but some funny things will happen (a few
         globals get overwritten). In the future this will be cleaned up, as
         there is no fundamental reason why it can't work perfectly."""
 
         # Get locals and globals from caller
         if local_ns is None or global_ns is None:
             call_frame = sys._getframe(stack_depth).f_back
 
             if local_ns is None:
                 local_ns = call_frame.f_locals
             if global_ns is None:
                 global_ns = call_frame.f_globals
 
         # Update namespaces and fire up interpreter
 
         # The global one is easy, we can just throw it in
         self.user_global_ns = global_ns
 
         # but the user/local one is tricky: ipython needs it to store internal
         # data, but we also need the locals.  We'll copy locals in the user
         # one, but will track what got copied so we can delete them at exit.
         # This is so that a later embedded call doesn't see locals from a
         # previous call (which most likely existed in a separate scope).
         local_varnames = local_ns.keys()
         self.user_ns.update(local_ns)
         #self.user_ns['local_ns'] = local_ns  # dbg
 
         # Patch for global embedding to make sure that things don't overwrite
         # user globals accidentally. Thanks to Richard <[e-mail]>
         # FIXME. Test this a bit more carefully (the if.. is new)
         if local_ns is None and global_ns is None:
             self.user_global_ns.update(__main__.__dict__)
 
         # make sure the tab-completer has the correct frame information, so it
         # actually completes using the frame's locals/globals
         self.set_completer_frame()
 
         with nested(self.builtin_trap, self.display_trap):
             self.interact(display_banner=display_banner)
         
             # now, purge out the user namespace from anything we might have added
             # from the caller's local namespace
             delvar = self.user_ns.pop
             for var in local_varnames:
                 delvar(var,None)
 
 
 _embedded_shell = None
 
 
 def embed(**kwargs):
     """Call this to embed IPython at the current point in your program.
 
     The first invocation of this will create an :class:`InteractiveShellEmbed`
     instance and then call it.  Consecutive calls just call the already
     created instance.
 
     Here is a simple example::
 
         from IPython import embed
         a = 10
         b = 20
         embed('First time')
         c = 30
         d = 40
         embed
 
     Full customization can be done by passing a :class:`Struct` in as the 
     config argument.
     """
     config = kwargs.get('config')
     header = kwargs.pop('header', u'')
     if config is None:
         config = load_default_config()
         config.InteractiveShellEmbed = config.TerminalInteractiveShell
         kwargs['config'] = config
     global _embedded_shell
     if _embedded_shell is None:
         _embedded_shell = InteractiveShellEmbed(**kwargs)
     _embedded_shell(header=header, stack_depth=2)

IPython/frontend/terminal/ipapp.py

@@ -1,375 +1,374 b''
 #!/usr/bin/env python
 # encoding: utf-8
 """
 The :class:`~IPython.core.application.Application` object for the command
 line :command:`ipython` program.
 
 Authors
 -------
 
 * Brian Granger
 * Fernando Perez
 * Min Ragan-Kelley
 """
 
 #-----------------------------------------------------------------------------
 #  Copyright (C) 2008-2010  The IPython Development Team
 #
 #  Distributed under the terms of the BSD License.  The full license is in
 #  the file COPYING, distributed as part of this software.
 #-----------------------------------------------------------------------------
 
 #-----------------------------------------------------------------------------
 # Imports
 #-----------------------------------------------------------------------------
 
 from __future__ import absolute_import
 
 import logging
 import os
 import sys
 
 from IPython.config.loader import (
     Config, PyFileConfigLoader
 )
 from IPython.config.application import boolean_flag
 from IPython.core import release
 from IPython.core import usage
 from IPython.core.crashhandler import CrashHandler
 from IPython.core.formatters import PlainTextFormatter
 from IPython.core.application import (
     ProfileDir, BaseIPythonApplication, base_flags, base_aliases
 )
 from IPython.core.shellapp import (
     InteractiveShellApp, shell_flags, shell_aliases
 )
 from IPython.frontend.terminal.interactiveshell import TerminalInteractiveShell
 from IPython.lib import inputhook
 from IPython.utils import warn
 from IPython.utils.path import get_ipython_dir, check_for_old_config
 from IPython.utils.traitlets import (
     Bool, Dict, CaselessStrEnum
 )
 
 #-----------------------------------------------------------------------------
 # Globals, utilities and helpers
 #-----------------------------------------------------------------------------
 
 #: The default config file name for this application.
 default_config_file_name = u'ipython_config.py'
 
 _examples = """
 ipython --pylab            # start in pylab mode
 ipython --pylab=qt         # start in pylab mode with the qt4 backend
 ipython --log-level=DEBUG  # set logging to DEBUG
 ipython --profile=foo      # start with profile foo
 
 ipython qtconsole          # start the qtconsole GUI application
 ipython qtconsole -h       # show the help string for the qtconsole subcmd
 
 ipython profile create foo # create profile foo w/ default config files
 ipython profile -h         # show the help string for the profile subcmd
 """
 
 #-----------------------------------------------------------------------------
 # Crash handler for this application
 #-----------------------------------------------------------------------------
 
 class IPAppCrashHandler(CrashHandler):
     """sys.excepthook for IPython itself, leaves a detailed report on disk."""
 
     def __init__(self, app):
         contact_name = release.authors['Fernando'][0]
         contact_email = release.authors['Fernando'][1]
         bug_tracker = 'http://github.com/ipython/ipython/issues'
         super(IPAppCrashHandler,self).__init__(
             app, contact_name, contact_email, bug_tracker
         )
 
     def make_report(self,traceback):
         """Return a string containing a crash report."""
 
         sec_sep = self.section_sep
         # Start with parent report
         report = [super(IPAppCrashHandler, self).make_report(traceback)]
         # Add interactive-specific info we may have
         rpt_add = report.append
         try:
             rpt_add(sec_sep+"History of session input:")
             for line in self.app.shell.user_ns['_ih']:
                 rpt_add(line)
             rpt_add('\n*** Last line of input (may not be in above history):\n')
             rpt_add(self.app.shell._last_input_line+'\n')
         except:
             pass
 
         return ''.join(report)
 
 #-----------------------------------------------------------------------------
 # Aliases and Flags
 #-----------------------------------------------------------------------------
 flags = dict(base_flags)
 flags.update(shell_flags)
 addflag = lambda *args: flags.update(boolean_flag(*args))
 addflag('autoedit-syntax', 'TerminalInteractiveShell.autoedit_syntax',
         'Turn on auto editing of files with syntax errors.',
         'Turn off auto editing of files with syntax errors.'
 )
 addflag('banner', 'TerminalIPythonApp.display_banner',
         "Display a banner upon starting IPython.",
         "Don't display a banner upon starting IPython."
 )
 addflag('confirm-exit', 'TerminalInteractiveShell.confirm_exit',
     """Set to confirm when you try to exit IPython with an EOF (Control-D
     in Unix, Control-Z/Enter in Windows). By typing 'exit' or 'quit',
     you can force a direct exit without any confirmation.""",
     "Don't prompt the user when exiting."
 )
 addflag('term-title', 'TerminalInteractiveShell.term_title',
     "Enable auto setting the terminal title.",
     "Disable auto setting the terminal title."
 )
 classic_config = Config()
 classic_config.InteractiveShell.cache_size = 0
 classic_config.PlainTextFormatter.pprint = False
 classic_config.InteractiveShell.prompt_in1 = '>>> '
 classic_config.InteractiveShell.prompt_in2 = '... '
 classic_config.InteractiveShell.prompt_out = ''
 classic_config.InteractiveShell.separate_in = ''
 classic_config.InteractiveShell.separate_out = ''
 classic_config.InteractiveShell.separate_out2 = ''
 classic_config.InteractiveShell.colors = 'NoColor'
 classic_config.InteractiveShell.xmode = 'Plain'
 
 flags['classic']=(
     classic_config,
     "Gives IPython a similar feel to the classic Python prompt."
 )
 # # log doesn't make so much sense this way anymore
 # paa('--log','-l',
 #     action='store_true', dest='InteractiveShell.logstart',
 #     help="Start logging to the default log file (./ipython_log.py).")
 #
 # # quick is harder to implement
 flags['quick']=(
     {'TerminalIPythonApp' : {'quick' : True}},
     "Enable quick startup with no config files."
 )
 
 flags['i'] = (
     {'TerminalIPythonApp' : {'force_interact' : True}},
     """If running code from the command line, become interactive afterwards.
     Note: can also be given simply as '-i.'"""
 )
 flags['pylab'] = (
     {'TerminalIPythonApp' : {'pylab' : 'auto'}},
     """Pre-load matplotlib and numpy for interactive use with
     the default matplotlib backend."""
 )
 
 aliases = dict(base_aliases)
 aliases.update(shell_aliases)
 
 # it's possible we don't want short aliases for *all* of these:
 aliases.update(dict(
     gui='TerminalIPythonApp.gui',
     pylab='TerminalIPythonApp.pylab',
 ))
 
 #-----------------------------------------------------------------------------
 # Main classes and functions
 #-----------------------------------------------------------------------------
 
 class TerminalIPythonApp(BaseIPythonApplication, InteractiveShellApp):
     name = u'ipython'
     description = usage.cl_usage
     default_config_file_name = default_config_file_name
     crash_handler_class = IPAppCrashHandler
     examples = _examples
 
     flags = Dict(flags)
     aliases = Dict(aliases)
     classes = [InteractiveShellApp, TerminalInteractiveShell, ProfileDir,
                PlainTextFormatter]
     subcommands = Dict(dict(
         qtconsole=('IPython.frontend.qt.console.qtconsoleapp.IPythonQtConsoleApp',
             """Launch the IPython Qt Console."""
         ),
         profile = ("IPython.core.profileapp.ProfileApp",
             "Create and manage IPython profiles.")
     ))
     
     # *do* autocreate requested profile, but don't create the config file.
     auto_create=Bool(True)
     # configurables
     ignore_old_config=Bool(False, config=True,
         help="Suppress warning messages about legacy config files"
     )
     quick = Bool(False, config=True,
         help="""Start IPython quickly by skipping the loading of config files."""
     )
     def _quick_changed(self, name, old, new):
         if new:
             self.load_config_file = lambda *a, **kw: None
             self.ignore_old_config=True
 
     gui = CaselessStrEnum(('qt','wx','gtk'), config=True,
         help="Enable GUI event loop integration ('qt', 'wx', 'gtk')."
     )
     pylab = CaselessStrEnum(['tk', 'qt', 'wx', 'gtk', 'osx', 'auto'],
         config=True,
         help="""Pre-load matplotlib and numpy for interactive use,
         selecting a particular matplotlib backend and loop integration.
         """
     )
     display_banner = Bool(True, config=True,
         help="Whether to display a banner upon starting IPython."
     )
 
     # if there is code of files to run from the cmd line, don't interact
     # unless the --i flag (App.force_interact) is true.
     force_interact = Bool(False, config=True,
         help="""If a command or file is given via the command-line,
         e.g. 'ipython foo.py"""
     )
     def _force_interact_changed(self, name, old, new):
         if new:
             self.interact = True
     
     def _file_to_run_changed(self, name, old, new):
         if new and not self.force_interact:
                 self.interact = False
     _code_to_run_changed = _file_to_run_changed
 
     # internal, not-configurable
     interact=Bool(True)
 
 
     def parse_command_line(self, argv=None):
         """override to allow old '-pylab' flag with deprecation warning"""
 
         argv = sys.argv[1:] if argv is None else argv
 
         if '-pylab' in argv:
             # deprecated `-pylab` given,
             # warn and transform into current syntax
             argv = argv[:] # copy, don't clobber
             idx = argv.index('-pylab')
             warn.warn("`-pylab` flag has been deprecated.\n"
             "    Use `--pylab` instead, or `--pylab=foo` to specify a backend.")
             sub = '--pylab'
             if len(argv) > idx+1:
                 # check for gui arg, as in '-pylab qt'
                 gui = argv[idx+1]
                 if gui in ('wx', 'qt', 'qt4', 'gtk', 'auto'):
                     sub = '--pylab='+gui
                     argv.pop(idx+1)
             argv[idx] = sub
         
         return super(TerminalIPythonApp, self).parse_command_line(argv)
 
     def initialize(self, argv=None):
         """Do actions after construct, but before starting the app."""
         super(TerminalIPythonApp, self).initialize(argv)
         if self.subapp is not None:
             # don't bother initializing further, starting subapp
             return
         if not self.ignore_old_config:
             check_for_old_config(self.ipython_dir)
         # print self.extra_args
         if self.extra_args:
             self.file_to_run = self.extra_args[0]
         # create the shell
         self.init_shell()
         # and draw the banner
         self.init_banner()
         # Now a variety of things that happen after the banner is printed.
         self.init_gui_pylab()
         self.init_extensions()
         self.init_code()
 
     def init_shell(self):
         """initialize the InteractiveShell instance"""
         # I am a little hesitant to put these into InteractiveShell itself.
         # But that might be the place for them
         sys.path.insert(0, '')
 
         # Create an InteractiveShell instance.
         # shell.display_banner should always be False for the terminal 
         # based app, because we call shell.show_banner() by hand below
         # so the banner shows *before* all extension loading stuff.
         self.shell = TerminalInteractiveShell.instance(config=self.config,
                         display_banner=False, profile_dir=self.profile_dir,
                         ipython_dir=self.ipython_dir)
 
     def init_banner(self):
         """optionally display the banner"""
         if self.display_banner and self.interact:
             self.shell.show_banner()
         # Make sure there is a space below the banner.
         if self.log_level <= logging.INFO: print
 
 
     def init_gui_pylab(self):
         """Enable GUI event loop integration, taking pylab into account."""
         gui = self.gui
 
         # Using `pylab` will also require gui activation, though which toolkit
         # to use may be chosen automatically based on mpl configuration.
         if self.pylab:
             activate = self.shell.enable_pylab
             if self.pylab == 'auto':
                 gui = None
             else:
                 gui = self.pylab
         else:
             # Enable only GUI integration, no pylab
             activate = inputhook.enable_gui
 
         if gui or self.pylab:
             try:
                 self.log.info("Enabling GUI event loop integration, "
                               "toolkit=%s, pylab=%s" % (gui, self.pylab) )
                 activate(gui)
             except:
                 self.log.warn("Error in enabling GUI event loop integration:")
                 self.shell.showtraceback()
 
     def start(self):
         if self.subapp is not None:
             return self.subapp.start()
         # perform any prexec steps:
         if self.interact:
             self.log.debug("Starting IPython's mainloop...")
             self.shell.mainloop()
         else:
             self.log.debug("IPython not interactive...")
 
 
 def load_default_config(ipython_dir=None):
     """Load the default config file from the default ipython_dir.
 
     This is useful for embedded shells.
     """
     if ipython_dir is None:
         ipython_dir = get_ipython_dir()
     profile_dir = os.path.join(ipython_dir, 'profile_default')
     cl = PyFileConfigLoader(default_config_file_name, profile_dir)
     try:
         config = cl.load_config()
     except IOError:
         # no config found
         config = Config()
     return config
 
 
 def launch_new_instance():
     """Create and run a full blown IPython instance"""
     app = TerminalIPythonApp.instance()
     app.initialize()
     app.start()
 
 
 if __name__ == '__main__':
     launch_new_instance()
-

IPython/lib/irunner.py

@@ -1,441 +1,437 b''
 #!/usr/bin/env python
 """Module for interactively running scripts.
 
 This module implements classes for interactively running scripts written for
 any system with a prompt which can be matched by a regexp suitable for
 pexpect.  It can be used to run as if they had been typed up interactively, an
 arbitrary series of commands for the target system.
 
 The module includes classes ready for IPython (with the default prompts),
 plain Python and SAGE, but making a new one is trivial.  To see how to use it,
 simply run the module as a script:
 
 ./irunner.py --help
 
 
 This is an extension of Ken Schutte <kschutte-AT-csail.mit.edu>'s script
 contributed on the ipython-user list:
 
 http://scipy.net/pipermail/ipython-user/2006-May/001705.html
 
 
 NOTES:
 
  - This module requires pexpect, available in most linux distros, or which can
  be downloaded from
 
     http://pexpect.sourceforge.net
 
  - Because pexpect only works under Unix or Windows-Cygwin, this has the same
  limitations.  This means that it will NOT work under native windows Python.
 """
 
 # Stdlib imports
 import optparse
 import os
 import sys
 
 # Third-party modules.
 import pexpect
 
 # Global usage strings, to avoid indentation issues when typing it below.
 USAGE = """
 Interactive script runner, type: %s
 
 runner [opts] script_name
 """
 
 def pexpect_monkeypatch():
     """Patch pexpect to prevent unhandled exceptions at VM teardown.
 
     Calling this function will monkeypatch the pexpect.spawn class and modify
     its __del__ method to make it more robust in the face of failures that can
     occur if it is called when the Python VM is shutting down.
 
     Since Python may fire __del__ methods arbitrarily late, it's possible for
     them to execute during the teardown of the Python VM itself.  At this
     point, various builtin modules have been reset to None.  Thus, the call to
     self.close() will trigger an exception because it tries to call os.close(),
     and os is now None.
     """
     
     if pexpect.__version__[:3] >= '2.2':
         # No need to patch, fix is already the upstream version.
         return
     
     def __del__(self):
         """This makes sure that no system resources are left open.
         Python only garbage collects Python objects. OS file descriptors
         are not Python objects, so they must be handled explicitly.
         If the child file descriptor was opened outside of this class
         (passed to the constructor) then this does not close it.
         """
         if not self.closed:
             try:
                 self.close()
             except AttributeError:
                 pass
 
     pexpect.spawn.__del__ = __del__
 
 pexpect_monkeypatch()
 
 # The generic runner class
 class InteractiveRunner(object):
     """Class to run a sequence of commands through an interactive program."""
     
     def __init__(self,program,prompts,args=None,out=sys.stdout,echo=True):
         """Construct a runner.
 
         Inputs:
 
           - program: command to execute the given program.
 
           - prompts: a list of patterns to match as valid prompts, in the
           format used by pexpect.  This basically means that it can be either
           a string (to be compiled as a regular expression) or a list of such
           (it must be a true list, as pexpect does type checks).
 
           If more than one prompt is given, the first is treated as the main
           program prompt and the others as 'continuation' prompts, like
           python's.  This means that blank lines in the input source are
           ommitted when the first prompt is matched, but are NOT ommitted when
           the continuation one matches, since this is how python signals the
           end of multiline input interactively.
 
         Optional inputs:
 
           - args(None): optional list of strings to pass as arguments to the
           child program.
 
           - out(sys.stdout): if given, an output stream to be used when writing
           output.  The only requirement is that it must have a .write() method.
 
         Public members not parameterized in the constructor:
 
           - delaybeforesend(0): Newer versions of pexpect have a delay before
           sending each new input.  For our purposes here, it's typically best
           to just set this to zero, but if you encounter reliability problems
           or want an interactive run to pause briefly at each prompt, just
           increase this value (it is measured in seconds).  Note that this
           variable is not honored at all by older versions of pexpect.
         """
         
         self.program = program
         self.prompts = prompts
         if args is None: args = []
         self.args = args
         self.out = out
         self.echo = echo
         # Other public members which we don't make as parameters, but which
         # users may occasionally want to tweak
         self.delaybeforesend = 0
 
         # Create child process and hold on to it so we don't have to re-create
         # for every single execution call
         c = self.child = pexpect.spawn(self.program,self.args,timeout=None)
         c.delaybeforesend = self.delaybeforesend
         # pexpect hard-codes the terminal size as (24,80) (rows,columns).
         # This causes problems because any line longer than 80 characters gets
         # completely overwrapped on the printed outptut (even though
         # internally the code runs fine).  We reset this to 99 rows X 200
         # columns (arbitrarily chosen), which should avoid problems in all
         # reasonable cases.
         c.setwinsize(99,200)
 
     def close(self):
         """close child process"""
 
         self.child.close()
 
     def run_file(self,fname,interact=False,get_output=False):
         """Run the given file interactively.
 
         Inputs:
 
           -fname: name of the file to execute.
 
         See the run_source docstring for the meaning of the optional
         arguments."""
 
         fobj = open(fname,'r')
         try:
             out = self.run_source(fobj,interact,get_output)
         finally:
             fobj.close()
         if get_output:
             return out
 
     def run_source(self,source,interact=False,get_output=False):
         """Run the given source code interactively.
 
         Inputs:
 
           - source: a string of code to be executed, or an open file object we
           can iterate over.
 
         Optional inputs:
 
           - interact(False): if true, start to interact with the running
           program at the end of the script.  Otherwise, just exit.
 
           - get_output(False): if true, capture the output of the child process
           (filtering the input commands out) and return it as a string.
 
         Returns:
           A string containing the process output, but only if requested.
           """
 
         # if the source is a string, chop it up in lines so we can iterate
         # over it just as if it were an open file.
         if not isinstance(source,file):
             source = source.splitlines(True)
 
         if self.echo:
             # normalize all strings we write to use the native OS line
             # separators.
             linesep  = os.linesep
             stdwrite = self.out.write
             write    = lambda s: stdwrite(s.replace('\r\n',linesep))
         else:
             # Quiet mode, all writes are no-ops
             write = lambda s: None
             
         c = self.child
         prompts = c.compile_pattern_list(self.prompts)
         prompt_idx = c.expect_list(prompts)
 
         # Flag whether the script ends normally or not, to know whether we can
         # do anything further with the underlying process.
         end_normal = True
 
         # If the output was requested, store it in a list for return at the end
         if get_output:
             output = []
             store_output = output.append
         
         for cmd in source:
             # skip blank lines for all matches to the 'main' prompt, while the
             # secondary prompts do not
             if prompt_idx==0 and \
                    (cmd.isspace() or cmd.lstrip().startswith('#')):
                 write(cmd)
                 continue
 
             # write('AFTER: '+c.after)  # dbg
             write(c.after)
             c.send(cmd)
             try:
                 prompt_idx = c.expect_list(prompts)
             except pexpect.EOF:
                 # this will happen if the child dies unexpectedly
                 write(c.before)
                 end_normal = False
                 break
             
             write(c.before)
 
             # With an echoing process, the output we get in c.before contains
             # the command sent, a newline, and then the actual process output
             if get_output:
                 store_output(c.before[len(cmd+'\n'):])
                 #write('CMD: <<%s>>' % cmd)  # dbg
                 #write('OUTPUT: <<%s>>' % output[-1])  # dbg
 
         self.out.flush()
         if end_normal:
             if interact:
                 c.send('\n')
                 print '<< Starting interactive mode >>',
                 try:
                     c.interact()
                 except OSError:
                     # This is what fires when the child stops.  Simply print a
                     # newline so the system prompt is aligned.  The extra
                     # space is there to make sure it gets printed, otherwise
                     # OS buffering sometimes just suppresses it.
                     write(' \n')
                     self.out.flush()
         else:
             if interact:
                 e="Further interaction is not possible: child process is dead."
                 print >> sys.stderr, e
 
         # Leave the child ready for more input later on, otherwise select just
         # hangs on the second invocation.
         if c.isalive():
             c.send('\n')
         
         # Return any requested output
         if get_output:
             return ''.join(output)
                 
     def main(self,argv=None):
         """Run as a command-line script."""
 
         parser = optparse.OptionParser(usage=USAGE % self.__class__.__name__)
         newopt = parser.add_option
         newopt('-i','--interact',action='store_true',default=False,
                help='Interact with the program after the script is run.')
 
         opts,args = parser.parse_args(argv)
 
         if len(args) != 1:
             print >> sys.stderr,"You must supply exactly one file to run."
             sys.exit(1)
 
         self.run_file(args[0],opts.interact)
 
 
 # Specific runners for particular programs
 class IPythonRunner(InteractiveRunner):
     """Interactive IPython runner.
 
     This initalizes IPython in 'nocolor' mode for simplicity.  This lets us
     avoid having to write a regexp that matches ANSI sequences, though pexpect
     does support them.  If anyone contributes patches for ANSI color support,
     they will be welcome.
 
     It also sets the prompts manually, since the prompt regexps for
     pexpect need to be matched to the actual prompts, so user-customized
     prompts would break this.
     """
     
     def __init__(self,program = 'ipython',args=None,out=sys.stdout,echo=True):
         """New runner, optionally passing the ipython command to use."""
         args0 = ['--colors=NoColor',
                  '--no-term-title',
                  '--no-autoindent',
                  # '--quick' is important, to prevent loading default config:
                  '--quick']
         if args is None: args = args0
         else: args = args0 + args
         prompts = [r'In \[\d+\]: ',r'   \.*: ']
         InteractiveRunner.__init__(self,program,prompts,args,out,echo)
 
 
 class PythonRunner(InteractiveRunner):
     """Interactive Python runner."""
 
     def __init__(self,program='python',args=None,out=sys.stdout,echo=True):
         """New runner, optionally passing the python command to use."""
 
         prompts = [r'>>> ',r'\.\.\. ']
         InteractiveRunner.__init__(self,program,prompts,args,out,echo)
 
 
 class SAGERunner(InteractiveRunner):
     """Interactive SAGE runner.
     
     WARNING: this runner only works if you manually configure your SAGE copy
     to use 'colors NoColor' in the ipythonrc config file, since currently the
     prompt matching regexp does not identify color sequences."""
 
     def __init__(self,program='sage',args=None,out=sys.stdout,echo=True):
         """New runner, optionally passing the sage command to use."""
 
         prompts = ['sage: ',r'\s*\.\.\. ']
         InteractiveRunner.__init__(self,program,prompts,args,out,echo)
 
 
 class RunnerFactory(object):
     """Code runner factory.
 
     This class provides an IPython code runner, but enforces that only one
     runner is ever instantiated.  The runner is created based on the extension
     of the first file to run, and it raises an exception if a runner is later
     requested for a different extension type.
 
     This ensures that we don't generate example files for doctest with a mix of
     python and ipython syntax.
     """
 
     def __init__(self,out=sys.stdout):
         """Instantiate a code runner."""
         
         self.out = out
         self.runner = None
         self.runnerClass = None
 
     def _makeRunner(self,runnerClass):
         self.runnerClass = runnerClass
         self.runner = runnerClass(out=self.out)
         return self.runner
           
     def __call__(self,fname):
         """Return a runner for the given filename."""
 
         if fname.endswith('.py'):
             runnerClass = PythonRunner
         elif fname.endswith('.ipy'):
             runnerClass = IPythonRunner
         else:
             raise ValueError('Unknown file type for Runner: %r' % fname)
 
         if self.runner is None:
             return self._makeRunner(runnerClass)
         else:
             if runnerClass==self.runnerClass:
                 return self.runner
             else:
                 e='A runner of type %r can not run file %r' % \
                    (self.runnerClass,fname)
                 raise ValueError(e)
 
 
 # Global usage string, to avoid indentation issues if typed in a function def.
 MAIN_USAGE = """
 %prog [options] file_to_run
 
 This is an interface to the various interactive runners available in this
 module.  If you want to pass specific options to one of the runners, you need
 to first terminate the main options with a '--', and then provide the runner's
 options.  For example:
 
 irunner.py --python -- --help
 
 will pass --help to the python runner.  Similarly,
 
 irunner.py --ipython -- --interact script.ipy
 
 will run the script.ipy file under the IPython runner, and then will start to
 interact with IPython at the end of the script (instead of exiting).
 
 The already implemented runners are listed below; adding one for a new program
 is a trivial task, see the source for examples.
-
-WARNING: the SAGE runner only works if you manually configure your SAGE copy
-to use 'colors NoColor' in the ipythonrc config file, since currently the
-prompt matching regexp does not identify color sequences.
 """
 
 def main():
     """Run as a command-line script."""
 
     parser = optparse.OptionParser(usage=MAIN_USAGE)
     newopt = parser.add_option
     parser.set_defaults(mode='ipython')
     newopt('--ipython',action='store_const',dest='mode',const='ipython',
            help='IPython interactive runner (default).')
     newopt('--python',action='store_const',dest='mode',const='python',
            help='Python interactive runner.')
     newopt('--sage',action='store_const',dest='mode',const='sage',
            help='SAGE interactive runner.')
 
     opts,args = parser.parse_args()
     runners = dict(ipython=IPythonRunner,
                    python=PythonRunner,
                    sage=SAGERunner)
 
     try:
         ext = os.path.splitext(args[0])[-1]
     except IndexError:
         ext = ''
     modes = {'.ipy':'ipython',
              '.py':'python',
              '.sage':'sage'}
     mode = modes.get(ext,opts.mode)
     runners[mode]().main(args)
 
 if __name__ == '__main__':
     main()

IPython/lib/pylabtools.py

@@ -1,321 +1,322 b''
 # -*- coding: utf-8 -*-
 """Pylab (matplotlib) support utilities.
 
 Authors
 -------
 
 * Fernando Perez.
 * Brian Granger
 """
 
 #-----------------------------------------------------------------------------
 #  Copyright (C) 2009  The IPython Development Team
 #
 #  Distributed under the terms of the BSD License.  The full license is in
 #  the file COPYING, distributed as part of this software.
 #-----------------------------------------------------------------------------
 
 #-----------------------------------------------------------------------------
 # Imports
 #-----------------------------------------------------------------------------
 
 from cStringIO import StringIO
 
 from IPython.utils.decorators import flag_calls
 
 # If user specifies a GUI, that dictates the backend, otherwise we read the
 # user's mpl default from the mpl rc structure
 backends = {'tk': 'TkAgg',
             'gtk': 'GTKAgg',
             'wx': 'WXAgg',
             'qt': 'Qt4Agg', # qt3 not supported
             'qt4': 'Qt4Agg',
             'osx': 'MacOSX',
             'inline' : 'module://IPython.zmq.pylab.backend_inline'}
 
 # We also need a reverse backends2guis mapping that will properly choose which
 # GUI support to activate based on the desired matplotlib backend.  For the
 # most part it's just a reverse of the above dict, but we also need to add a
 # few others that map to the same GUI manually:
 backend2gui = dict(zip(backends.values(), backends.keys()))
 # In the reverse mapping, there are a few extra valid matplotlib backends that
 # map to the same GUI support
 backend2gui['GTK'] = backend2gui['GTKCairo'] = 'gtk'
 backend2gui['WX'] = 'wx'
 backend2gui['CocoaAgg'] = 'osx'
 
 #-----------------------------------------------------------------------------
 # Matplotlib utilities
 #-----------------------------------------------------------------------------
 
 
 def getfigs(*fig_nums):
     """Get a list of matplotlib figures by figure numbers.
 
     If no arguments are given, all available figures are returned.  If the
     argument list contains references to invalid figures, a warning is printed
     but the function continues pasting further figures.
 
     Parameters
     ----------
     figs : tuple
         A tuple of ints giving the figure numbers of the figures to return.
     """
     from matplotlib._pylab_helpers import Gcf
     if not fig_nums:
         fig_managers = Gcf.get_all_fig_managers()
         return [fm.canvas.figure for fm in fig_managers]
     else:
         figs = []
         for num in fig_nums:
             f = Gcf.figs.get(num)
             if f is None:
                 print('Warning: figure %s not available.' % num)
             else:
                 figs.append(f.canvas.figure)
         return figs
 
 
 def figsize(sizex, sizey):
     """Set the default figure size to be [sizex, sizey].
 
     This is just an easy to remember, convenience wrapper that sets::
 
       matplotlib.rcParams['figure.figsize'] = [sizex, sizey]
     """
     import matplotlib
     matplotlib.rcParams['figure.figsize'] = [sizex, sizey]
 
 
 def print_figure(fig, fmt='png'):
     """Convert a figure to svg or png for inline display."""
     # When there's an empty figure, we shouldn't return anything, otherwise we
     # get big blank areas in the qt console.
     if not fig.axes:
         return
 
     fc = fig.get_facecolor()
     ec = fig.get_edgecolor()
     fig.set_facecolor('white')
     fig.set_edgecolor('white')
     try:
         string_io = StringIO()
         # use 72 dpi to match QTConsole's dpi
-        fig.canvas.print_figure(string_io, format=fmt, dpi=72)
+        fig.canvas.print_figure(string_io, format=fmt, dpi=72,
+                                bbox_inches='tight')
         data = string_io.getvalue()
     finally:
         fig.set_facecolor(fc)
         fig.set_edgecolor(ec)
     return data
 
 
 # We need a little factory function here to create the closure where
 # safe_execfile can live.
 def mpl_runner(safe_execfile):
     """Factory to return a matplotlib-enabled runner for %run.
 
     Parameters
     ----------
     safe_execfile : function
       This must be a function with the same interface as the
       :meth:`safe_execfile` method of IPython.
 
     Returns
     -------
     A function suitable for use as the ``runner`` argument of the %run magic
     function.
     """
     
     def mpl_execfile(fname,*where,**kw):
         """matplotlib-aware wrapper around safe_execfile.
 
         Its interface is identical to that of the :func:`execfile` builtin.
 
         This is ultimately a call to execfile(), but wrapped in safeties to
         properly handle interactive rendering."""
 
         import matplotlib
         import matplotlib.pylab as pylab
 
         #print '*** Matplotlib runner ***' # dbg
         # turn off rendering until end of script
         is_interactive = matplotlib.rcParams['interactive']
         matplotlib.interactive(False)
         safe_execfile(fname,*where,**kw)
         matplotlib.interactive(is_interactive)
         # make rendering call now, if the user tried to do it
         if pylab.draw_if_interactive.called:
             pylab.draw()
             pylab.draw_if_interactive.called = False
 
     return mpl_execfile
 
 
 def select_figure_format(shell, fmt):
     """Select figure format for inline backend, either 'png' or 'svg'.
 
     Using this method ensures only one figure format is active at a time.
     """
     from matplotlib.figure import Figure
     from IPython.zmq.pylab import backend_inline
 
     svg_formatter = shell.display_formatter.formatters['image/svg+xml']
     png_formatter = shell.display_formatter.formatters['image/png']
 
     if fmt=='png':
         svg_formatter.type_printers.pop(Figure, None)
         png_formatter.for_type(Figure, lambda fig: print_figure(fig, 'png'))
     elif fmt=='svg':
         png_formatter.type_printers.pop(Figure, None)
         svg_formatter.for_type(Figure, lambda fig: print_figure(fig, 'svg'))
     else:
         raise ValueError("supported formats are: 'png', 'svg', not %r"%fmt)
 
     # set the format to be used in the backend()
     backend_inline._figure_format = fmt
 
 #-----------------------------------------------------------------------------
 # Code for initializing matplotlib and importing pylab
 #-----------------------------------------------------------------------------
 
 
 def find_gui_and_backend(gui=None):
     """Given a gui string return the gui and mpl backend.
 
     Parameters
     ----------
     gui : str
         Can be one of ('tk','gtk','wx','qt','qt4','inline').
 
     Returns
     -------
     A tuple of (gui, backend) where backend is one of ('TkAgg','GTKAgg',
     'WXAgg','Qt4Agg','module://IPython.zmq.pylab.backend_inline').
     """
 
     import matplotlib
 
     if gui:
         # select backend based on requested gui
         backend = backends[gui]
     else:
         backend = matplotlib.rcParams['backend']
         # In this case, we need to find what the appropriate gui selection call
         # should be for IPython, so we can activate inputhook accordingly
         gui = backend2gui.get(backend, None)
     return gui, backend
 
 
 def activate_matplotlib(backend):
     """Activate the given backend and set interactive to True."""
 
     import matplotlib
     if backend.startswith('module://'):
         # Work around bug in matplotlib: matplotlib.use converts the
         # backend_id to lowercase even if a module name is specified!
         matplotlib.rcParams['backend'] = backend
     else:
         matplotlib.use(backend)
     matplotlib.interactive(True)
 
     # This must be imported last in the matplotlib series, after
     # backend/interactivity choices have been made
     import matplotlib.pylab as pylab
 
     # XXX For now leave this commented out, but depending on discussions with
     # mpl-dev, we may be able to allow interactive switching...
     #import matplotlib.pyplot
     #matplotlib.pyplot.switch_backend(backend)
 
     pylab.show._needmain = False
     # We need to detect at runtime whether show() is called by the user.
     # For this, we wrap it into a decorator which adds a 'called' flag.
     pylab.draw_if_interactive = flag_calls(pylab.draw_if_interactive)
 
 def import_pylab(user_ns, backend, import_all=True, shell=None):
     """Import the standard pylab symbols into user_ns."""
 
     # Import numpy as np/pyplot as plt are conventions we're trying to
     # somewhat standardize on.  Making them available to users by default
     # will greatly help this.
     s = ("import numpy\n"
           "import matplotlib\n"
           "from matplotlib import pylab, mlab, pyplot\n"
           "np = numpy\n"
           "plt = pyplot\n"
           )
     exec s in user_ns
 
     if shell is not None:
         exec s in shell.user_ns_hidden
         # If using our svg payload backend, register the post-execution
         # function that will pick up the results for display.  This can only be
         # done with access to the real shell object.
         #
         from IPython.zmq.pylab.backend_inline import InlineBackendConfig
 
         cfg = InlineBackendConfig.instance(config=shell.config)
         cfg.shell = shell
 
         if backend == backends['inline']:
             from IPython.zmq.pylab.backend_inline import flush_figures
             from matplotlib import pyplot
             shell.register_post_execute(flush_figures)
             # load inline_rc
             pyplot.rcParams.update(cfg.rc)
             
             # Add 'figsize' to pyplot and to the user's namespace
             user_ns['figsize'] = pyplot.figsize = figsize
             shell.user_ns_hidden['figsize'] = figsize
         
         # Setup the default figure format
         fmt = cfg.figure_format
         select_figure_format(shell, fmt)
 
         # The old pastefig function has been replaced by display
         from IPython.core.display import display
         # Add display and display_png to the user's namespace
         user_ns['display'] = display
         shell.user_ns_hidden['display'] = display
         user_ns['getfigs'] = getfigs
         shell.user_ns_hidden['getfigs'] = getfigs
 
     if import_all:
         s = ("from matplotlib.pylab import *\n"
              "from numpy import *\n")
         exec s in user_ns
         if shell is not None:
             exec s in shell.user_ns_hidden
 
 
 def pylab_activate(user_ns, gui=None, import_all=True):
     """Activate pylab mode in the user's namespace.
 
     Loads and initializes numpy, matplotlib and friends for interactive use.
 
     Parameters
     ----------
     user_ns : dict
       Namespace where the imports will occur.
 
     gui : optional, string
       A valid gui name following the conventions of the %gui magic.
 
     import_all : optional, boolean
       If true, an 'import *' is done from numpy and pylab.
 
     Returns
     -------
     The actual gui used (if not given as input, it was obtained from matplotlib
     itself, and will be needed next to configure IPython's gui integration.
     """
     gui, backend = find_gui_and_backend(gui)
     activate_matplotlib(backend)
     import_pylab(user_ns, backend, import_all)
 
     print """
 Welcome to pylab, a matplotlib-based Python environment [backend: %s].
 For more information, type 'help(pylab)'.""" % backend
     
     return gui
 

docs/man/ipython.1

@@ -1,241 +1,241 b''
 .\"                                      Hey, EMACS: -*- nroff -*-
 .\" First parameter, NAME, should be all caps
 .\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
 .\" other parameters are allowed: see man(7), man(1)
-.TH IPYTHON 1 "November 30, 2004"
+.TH IPYTHON 1 "July 15, 2011"
 .\" Please adjust this date whenever revising the manpage.
 .\"
 .\" Some roff macros, for reference:
 .\" .nh        disable hyphenation
 .\" .hy        enable hyphenation
 .\" .ad l      left justify
 .\" .ad b      justify to both left and right margins
 .\" .nf        disable filling
 .\" .fi        enable filling
 .\" .br        insert line break
 .\" .sp <n>    insert n+1 empty lines
 .\" for manpage-specific macros, see man(7) and groff_man(7)
 .\" .SH        section heading
 .\" .SS        secondary section heading
 .\"
 .\"
 .\" To preview this page as plain text: nroff -man ipython.1
 .\"
 .SH NAME
-ipython \- An Enhanced Interactive Python
+ipython \- Tools for Interactive Computing in Python.
 .SH SYNOPSIS
 .B ipython
 .RI [ options ] " files" ...
 .SH DESCRIPTION
-An interactive Python shell with automatic history (input and output),
-dynamic object introspection, easier configuration, command
-completion, access to the system shell, integration with numerical and
-scientific computing tools, and more.
+An interactive Python shell with automatic history (input and output), dynamic
+object introspection, easier configuration, command completion, access to the
+system shell, integration with numerical and scientific computing tools, and
+more.
 .
 .SH REGULAR OPTIONS
 All options that take values, must be of the form '\-\-name=value', but
 flags that take no arguments are allowed a single '\-' to allow common
 patterns like: 'ipython -i myscript.py'.  To pass arguments to scripts,
 rather than to IPython, specify them after '--'.
 .br
 .sp 1
 All options can also be set from your ipython_config.py configuration file.
 See the provided examples for assistance.  Options given on the
 commandline override the values set in ipython_config.py.  To generate
 the default config file, do `ipython profile create`.
 .br
 .sp 1
 All options with a [no] prepended can be specified in negated form
 (\\--no\-option instead of \-\-option) to turn the feature off.
 .TP
 .B \-h, \-\-help
 Show summary of options.
 .B \-\-no-autoindent
 Turn off autoindenting.
 .TP
 .B \-\-autoedit-syntax
 Turn on auto editing of files with syntax errors.
 .TP
 .B \-\-pylab
 Pre-load matplotlib and numpy for interactive use with
 the default matplotlib backend.
 .TP
 .B \-\-confirm-exit
 Set to confirm when you try to exit IPython with an EOF (Control-D
 in Unix, Control-Z/Enter in Windows). By typing 'exit' or 'quit',
 you can force a direct exit without any confirmation.
 .TP
 .B \-\-deep-reload
 Enable deep (recursive) reloading by default. IPython can use the
 deep_reload module which reloads changes in modules recursively (it
 replaces the reload() function, so you don't need to change anything to
 use it). deep_reload() forces a full reload of modules whose code may
 have changed, which the default reload() function does not.  When
 deep_reload is off, IPython will use the normal reload(), but
 deep_reload will still be available as dreload(). This feature is off
 by default [which means that you have both normal reload() and
 dreload()].
 .TP
 .B \-\-no-autoedit-syntax
 Turn off auto editing of files with syntax errors.
 .TP
 .B \-\-term-title
 Enable auto setting the terminal title.
 .TP
 .B \-\-no-confirm-exit
 Don't prompt the user when exiting.
 .TP
 .B \-\-autoindent
 Turn on autoindenting.
 .TP
 .B \-\-classic
 Gives IPython a similar feel to the classic Python prompt.
 .TP
 .B \-\-no-automagic
 Turn off the auto calling of magic commands.
 .TP
 .B \-\-banner
 Display a banner upon starting IPython.
 .TP
 .B \-\-automagic
 Turn on the auto calling of magic commands. Type %%magic at the
 IPython  prompt  for  more information.
 .TP
 .B \-\-no-deep-reload
 Disable deep (recursive) reloading by default.
 .TP
 .B \-\-no-term-title
 Disable auto setting the terminal title.
 .TP
 .B \-\-nosep
 Eliminate all spacing between prompts.
 .TP
 .B \-\-i
 also works as '-i'
 If running code from the command line, become interactive afterwards.
 .TP
 .B \-\-debug
 set log level to logging.DEBUG (maximize logging output)
 .TP
 .B \-\-pprint
 Enable auto pretty printing of results.
 .TP
 .B \-\-quiet
 set log level to logging.CRITICAL (minimize logging output)
 .TP
 .B \-\-pdb
 Enable auto calling the pdb debugger after every exception.
 .TP
 .B \-\-color-info
 IPython can display information about objects via a set of func-
 tions, and optionally can use colors for this, syntax highlighting
 source code and various other elements.  However, because this
 information is passed through a pager (like 'less') and many pagers get
 confused with color codes, this option is off by default.  You can test
 it and turn it on permanently in your ipython_config.py file if it
 works for you.  Test it and turn it on permanently if it works with
 your system.  The magic function %%color_info allows you to toggle this
 interactively for testing.
 .TP
 .B \-\-init
 Initialize profile with default config files
 .TP
 .B \-\-no-pdb
 Disable auto calling the pdb debugger after every exception.
 .TP
 .B \-\-quick
 Enable quick startup with no config files.
 .TP
 .B \-\-no-color-info
 Disable using colors for info related things.
 .TP
 .B \-\-no-pprint
 Disable auto auto pretty printing of results.
 .TP
 .B \-\-no-banner
 Don't display a banner upon starting IPython.
 .TP
 .B \-\-profile=<Unicode> (BaseIPythonApplication.profile)
 Default: u'default'
 The IPython profile to use.
 .TP
 .B \-\-c=<Unicode> (InteractiveShellApp.code_to_run)
 Default: ''
 Execute the given command string.
 .TP
 .B \-\-logappend=<Unicode> (InteractiveShell.logappend)
 Default: ''
 Start logging to the given file in append mode.
 .TP
 .B \-\-autocall=<Enum> (InteractiveShell.autocall)
 Default: 1
 Choices: (0, 1, 2)
 Make IPython automatically call any callable object even if you didn't type
 explicit parentheses. For example, 'str 43' becomes 'str(43)' automatically.
 The value can be '0' to disable the feature, '1' for 'smart' autocall, where
 it is not applied if there are no more arguments on the line, and '2' for
 'full' autocall, where all callable objects are automatically called (even
 if no arguments are present). The default is '1'.
 .TP
 .B \-\-ipython-dir=<Unicode> (BaseIPythonApplication.ipython_dir)
 Default: u'/Users/minrk/.ipython'
 The name of the IPython directory. This directory is used for logging
 configuration (through profiles), history storage, etc. The default is
 usually $HOME/.ipython. This options can also be specified through the
 environment variable IPYTHON_DIR.
 .TP
 .B \-\-gui=<CaselessStrEnum> (TerminalIPythonApp.gui)
 Default: None
 Choices: ('qt', 'wx', 'gtk')
 Enable GUI event loop integration ('qt', 'wx', 'gtk').
 .TP
 .B \-\-pylab=<CaselessStrEnum> (TerminalIPythonApp.pylab)
 Default: None
 Choices: ['tk', 'qt', 'wx', 'gtk', 'osx', 'auto']
 Pre-load matplotlib and numpy for interactive use, selecting a particular
 matplotlib backend and loop integration.
 .TP
 .B \-\-ext=<Unicode> (InteractiveShellApp.extra_extension)
 Default: ''
 dotted module name of an IPython extension to load.
 .TP
 .B \-\-log-level=<Enum> (Application.log_level)
 Default: 30
 Choices: (0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL')
 Set the log level by value or name.
 .TP
 .B \-\-colors=<CaselessStrEnum> (InteractiveShell.colors)
 Default: 'LightBG'
 Choices: ('NoColor', 'LightBG', 'Linux')
 Set the color scheme (NoColor, Linux, or LightBG).
 .TP
 .B \-\-cache-size=<Int> (InteractiveShell.cache_size)
 Default: 1000
 Set the size of the output cache.  The default is 1000, you can change it
 permanently in your config file.  Setting it to 0 completely disables the
 caching system, and the minimum value accepted is 20 (if you provide a value
 less than 20, it is reset to 0 and a warning is issued).  This limit is
 defined because otherwise you'll spend more time re-flushing a too small
 cache than working
 .TP
 .B \-\-logfile=<Unicode> (InteractiveShell.logfile)
 Default: ''
 The name of the logfile to use.
 .
 .SH EMBEDDING
 It is possible to start an IPython instance inside your own Python
 programs.  In the documentation example files there are some
 illustrations on how to do this.
 .br
 .sp 1
 This feature allows you to evalutate dynamically the state of your
 code, operate with your variables, analyze them, etc.  Note however
 that any changes you make to values while in the shell do NOT
 propagate back to the running code, so it is safe to modify your
 values because you won't break your code in bizarre ways by doing so.
 .SH AUTHOR
 IPython was written by Fernando Perez <[e-mail]>, based on earlier
 code by Janko Hauser <[e-mail]> and Nathaniel Gray
 <[e-mail]>.  This manual page was written by Jack Moffitt
 <[e-mail]>, for the Debian project (but may be used by others), and updated by
 Min Ragan-Kelley <[e-mail]> for 0.11.

docs/man/irunner.1

@@ -1,49 +1,49 b''
-.TH IRUNNER 1 "April 24, 2007" "" ""
+.TH IRUNNER 1 "July 15, 2011" "" ""
 .SH NAME
 \fBirunner \- interactive runner interface
 .SH SYNOPSIS
 .nf
 .fam C
 \fBirunner\fP [\fIoptions\fP] \fIfile_to_run\fP
 .fam T
 .fi
 .SH DESCRIPTION
 irunner is an interface to the various interactive runners
 available in IPython's \fBirunner\fP module. 
 .PP
 The already implemented runners are listed below; adding
 one for a new program is a trivial task, see the source
 for examples.
 .SH OPTIONS
 .TP
 .B
 \-h, \-\-help
 show this help message and exit
 .TP
 .B
 \-\-ipython
 IPython interactive runner (default).
 .TP
 .B
 \-\-python
 Python interactive runner.
 .TP
 .B
 \-\-sage
 SAGE interactive runner.
 .SH EXAMPLE
 irunner.py \-\-python \-\- \-\-help
 will pass \-\-help to the python runner.
 Similarly,
 irunner.py \-\-ipython \-\- \-\-interact script.ipy
 .SH SEE ALSO
 .BR ipython(1)
 .br
 .SH AUTHOR
 \fBirunner\fP is an extension of Ken Schutte <kschutte-AT-csail.mit.edu>'s
 script contributed on the ipython-user list:
 http://scipy.net/pipermail/ipython-user/2006-May/001705.html
 .PP
 This manual page was written by Bernd Zeimetz <[e-mail]>, for the Debian
 project (but may be used by others).  Modified by Fernando Perez
 <[e-mail]> for inclusion in IPython.

docs/man/pycolor.1

@@ -1,38 +1,39 b''
 .\"                                      Hey, EMACS: -*- nroff -*-
 .\" First parameter, NAME, should be all caps
 .\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
 .\" other parameters are allowed: see man(7), man(1)
-.TH PYCOLOR 1 "May 12, 2007"
+.TH PYCOLOR 1 "July 15, 2011"
 .\" Please adjust this date whenever revising the manpage.
 .\"
 .\" Some roff macros, for reference:
 .\" .nh        disable hyphenation
 .\" .hy        enable hyphenation
 .\" .ad l      left justify
 .\" .ad b      justify to both left and right margins
 .\" .nf        disable filling
 .\" .fi        enable filling
 .\" .br        insert line break
 .\" .sp <n>    insert n+1 empty lines
 .\" for manpage-specific macros, see man(7)
 .SH NAME
 pycolor \- Colorize a python file or stdin using ANSI and print to stdout.
 .SH SYNOPSIS
 .B pycolor
 .RI [ options ]
 .RI [ file ]
 .SH DESCRIPTION
 Prints a colorized version of the input file (or standard input if no file is
 given, or the file name - is given) to standard out.
 .SH OPTIONS
 .TP
 .B \-h, \-\-help
 Output a brief help message.
 .TP
 .B \-s, \-\-scheme <scheme>
-Give the color scheme to use.  Currently only Linux (default),
-LightBG, and NOColor are implemented.
+Give the color scheme to use.  Currently only Linux (default), LightBG, and
+NoColor are implemented.
 .SH AUTHOR
-pycolor was written by Fernando Perez <[e-mail]>.
+pycolor is part of the IPython project (http://ipython.org).
 This manual page was written by Jack Moffitt <[e-mail]>,
-for the Debian project (but may be used by others).
+for the Debian project (but may be used by others).  Updated by Fernando Perez
+<[e-mail]>.