##// END OF EJS Templates
FIX: updated ssh environment copying to escape special characters for posix compatibility
Satrajit Ghosh -
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@@ -1,1033 +1,1041 b''
1 1 #!/usr/bin/env python
2 2 # encoding: utf-8
3 3
4 4 """Start an IPython cluster = (controller + engines)."""
5 5
6 6 #-----------------------------------------------------------------------------
7 7 # Copyright (C) 2008 The IPython Development Team
8 8 #
9 9 # Distributed under the terms of the BSD License. The full license is in
10 10 # the file COPYING, distributed as part of this software.
11 11 #-----------------------------------------------------------------------------
12 12
13 13 #-----------------------------------------------------------------------------
14 14 # Imports
15 15 #-----------------------------------------------------------------------------
16 16
17 17 import os
18 18 import re
19 19 import sys
20 20 import signal
21 21 import stat
22 22 import tempfile
23 23 pjoin = os.path.join
24 24
25 25 from twisted.internet import reactor, defer
26 26 from twisted.internet.protocol import ProcessProtocol
27 27 from twisted.internet.error import ProcessDone, ProcessTerminated
28 28 from twisted.internet.utils import getProcessOutput
29 29 from twisted.python import failure, log
30 30
31 31 from IPython.external import argparse
32 32 from IPython.external import Itpl
33 33 from IPython.genutils import (
34 34 get_ipython_dir,
35 35 get_log_dir,
36 36 get_security_dir,
37 37 num_cpus
38 38 )
39 39 from IPython.kernel.fcutil import have_crypto
40 40
41 41 # Create various ipython directories if they don't exist.
42 42 # This must be done before IPython.kernel.config is imported.
43 43 from IPython.iplib import user_setup
44 44 if os.name == 'posix':
45 45 rc_suffix = ''
46 46 else:
47 47 rc_suffix = '.ini'
48 48 user_setup(get_ipython_dir(), rc_suffix, mode='install', interactive=False)
49 49 get_log_dir()
50 50 get_security_dir()
51 51
52 52 from IPython.kernel.config import config_manager as kernel_config_manager
53 53 from IPython.kernel.error import SecurityError, FileTimeoutError
54 54 from IPython.kernel.fcutil import have_crypto
55 55 from IPython.kernel.twistedutil import gatherBoth, wait_for_file
56 56 from IPython.kernel.util import printer
57 57
58 58 #-----------------------------------------------------------------------------
59 59 # General process handling code
60 60 #-----------------------------------------------------------------------------
61 61
62 62
63 63 class ProcessStateError(Exception):
64 64 pass
65 65
66 66 class UnknownStatus(Exception):
67 67 pass
68 68
69 69 class LauncherProcessProtocol(ProcessProtocol):
70 70 """
71 71 A ProcessProtocol to go with the ProcessLauncher.
72 72 """
73 73 def __init__(self, process_launcher):
74 74 self.process_launcher = process_launcher
75 75
76 76 def connectionMade(self):
77 77 self.process_launcher.fire_start_deferred(self.transport.pid)
78 78
79 79 def processEnded(self, status):
80 80 value = status.value
81 81 if isinstance(value, ProcessDone):
82 82 self.process_launcher.fire_stop_deferred(0)
83 83 elif isinstance(value, ProcessTerminated):
84 84 self.process_launcher.fire_stop_deferred(
85 85 {'exit_code':value.exitCode,
86 86 'signal':value.signal,
87 87 'status':value.status
88 88 }
89 89 )
90 90 else:
91 91 raise UnknownStatus("unknown exit status, this is probably a bug in Twisted")
92 92
93 93 def outReceived(self, data):
94 94 log.msg(data)
95 95
96 96 def errReceived(self, data):
97 97 log.err(data)
98 98
99 99 class ProcessLauncher(object):
100 100 """
101 101 Start and stop an external process in an asynchronous manner.
102 102
103 103 Currently this uses deferreds to notify other parties of process state
104 104 changes. This is an awkward design and should be moved to using
105 105 a formal NotificationCenter.
106 106 """
107 107 def __init__(self, cmd_and_args):
108 108 self.cmd = cmd_and_args[0]
109 109 self.args = cmd_and_args
110 110 self._reset()
111 111
112 112 def _reset(self):
113 113 self.process_protocol = None
114 114 self.pid = None
115 115 self.start_deferred = None
116 116 self.stop_deferreds = []
117 117 self.state = 'before' # before, running, or after
118 118
119 119 @property
120 120 def running(self):
121 121 if self.state == 'running':
122 122 return True
123 123 else:
124 124 return False
125 125
126 126 def fire_start_deferred(self, pid):
127 127 self.pid = pid
128 128 self.state = 'running'
129 129 log.msg('Process %r has started with pid=%i' % (self.args, pid))
130 130 self.start_deferred.callback(pid)
131 131
132 132 def start(self):
133 133 if self.state == 'before':
134 134 self.process_protocol = LauncherProcessProtocol(self)
135 135 self.start_deferred = defer.Deferred()
136 136 self.process_transport = reactor.spawnProcess(
137 137 self.process_protocol,
138 138 self.cmd,
139 139 self.args,
140 140 env=os.environ
141 141 )
142 142 return self.start_deferred
143 143 else:
144 144 s = 'the process has already been started and has state: %r' % \
145 145 self.state
146 146 return defer.fail(ProcessStateError(s))
147 147
148 148 def get_stop_deferred(self):
149 149 if self.state == 'running' or self.state == 'before':
150 150 d = defer.Deferred()
151 151 self.stop_deferreds.append(d)
152 152 return d
153 153 else:
154 154 s = 'this process is already complete'
155 155 return defer.fail(ProcessStateError(s))
156 156
157 157 def fire_stop_deferred(self, exit_code):
158 158 log.msg('Process %r has stopped with %r' % (self.args, exit_code))
159 159 self.state = 'after'
160 160 for d in self.stop_deferreds:
161 161 d.callback(exit_code)
162 162
163 163 def signal(self, sig):
164 164 """
165 165 Send a signal to the process.
166 166
167 167 The argument sig can be ('KILL','INT', etc.) or any signal number.
168 168 """
169 169 if self.state == 'running':
170 170 self.process_transport.signalProcess(sig)
171 171
172 172 # def __del__(self):
173 173 # self.signal('KILL')
174 174
175 175 def interrupt_then_kill(self, delay=1.0):
176 176 self.signal('INT')
177 177 reactor.callLater(delay, self.signal, 'KILL')
178 178
179 179
180 180 #-----------------------------------------------------------------------------
181 181 # Code for launching controller and engines
182 182 #-----------------------------------------------------------------------------
183 183
184 184
185 185 class ControllerLauncher(ProcessLauncher):
186 186
187 187 def __init__(self, extra_args=None):
188 188 if sys.platform == 'win32':
189 189 # This logic is needed because the ipcontroller script doesn't
190 190 # always get installed in the same way or in the same location.
191 191 from IPython.kernel.scripts import ipcontroller
192 192 script_location = ipcontroller.__file__.replace('.pyc', '.py')
193 193 # The -u option here turns on unbuffered output, which is required
194 194 # on Win32 to prevent wierd conflict and problems with Twisted.
195 195 # Also, use sys.executable to make sure we are picking up the
196 196 # right python exe.
197 197 args = [sys.executable, '-u', script_location]
198 198 else:
199 199 args = ['ipcontroller']
200 200 self.extra_args = extra_args
201 201 if extra_args is not None:
202 202 args.extend(extra_args)
203 203
204 204 ProcessLauncher.__init__(self, args)
205 205
206 206
207 207 class EngineLauncher(ProcessLauncher):
208 208
209 209 def __init__(self, extra_args=None):
210 210 if sys.platform == 'win32':
211 211 # This logic is needed because the ipcontroller script doesn't
212 212 # always get installed in the same way or in the same location.
213 213 from IPython.kernel.scripts import ipengine
214 214 script_location = ipengine.__file__.replace('.pyc', '.py')
215 215 # The -u option here turns on unbuffered output, which is required
216 216 # on Win32 to prevent wierd conflict and problems with Twisted.
217 217 # Also, use sys.executable to make sure we are picking up the
218 218 # right python exe.
219 219 args = [sys.executable, '-u', script_location]
220 220 else:
221 221 args = ['ipengine']
222 222 self.extra_args = extra_args
223 223 if extra_args is not None:
224 224 args.extend(extra_args)
225 225
226 226 ProcessLauncher.__init__(self, args)
227 227
228 228
229 229 class LocalEngineSet(object):
230 230
231 231 def __init__(self, extra_args=None):
232 232 self.extra_args = extra_args
233 233 self.launchers = []
234 234
235 235 def start(self, n):
236 236 dlist = []
237 237 for i in range(n):
238 238 print "starting engine:", i
239 239 el = EngineLauncher(extra_args=self.extra_args)
240 240 d = el.start()
241 241 self.launchers.append(el)
242 242 dlist.append(d)
243 243 dfinal = gatherBoth(dlist, consumeErrors=True)
244 244 dfinal.addCallback(self._handle_start)
245 245 return dfinal
246 246
247 247 def _handle_start(self, r):
248 248 log.msg('Engines started with pids: %r' % r)
249 249 return r
250 250
251 251 def _handle_stop(self, r):
252 252 log.msg('Engines received signal: %r' % r)
253 253 return r
254 254
255 255 def signal(self, sig):
256 256 dlist = []
257 257 for el in self.launchers:
258 258 d = el.get_stop_deferred()
259 259 dlist.append(d)
260 260 el.signal(sig)
261 261 dfinal = gatherBoth(dlist, consumeErrors=True)
262 262 dfinal.addCallback(self._handle_stop)
263 263 return dfinal
264 264
265 265 def interrupt_then_kill(self, delay=1.0):
266 266 dlist = []
267 267 for el in self.launchers:
268 268 d = el.get_stop_deferred()
269 269 dlist.append(d)
270 270 el.interrupt_then_kill(delay)
271 271 dfinal = gatherBoth(dlist, consumeErrors=True)
272 272 dfinal.addCallback(self._handle_stop)
273 273 return dfinal
274 274
275 275 class BatchEngineSet(object):
276 276
277 277 # Subclasses must fill these in. See PBSEngineSet/SGEEngineSet
278 278 name = ''
279 279 submit_command = ''
280 280 delete_command = ''
281 281 job_id_regexp = ''
282 282 job_array_regexp = ''
283 283 job_array_template = ''
284 284 queue_regexp = ''
285 285 queue_template = ''
286 286 default_template = ''
287 287
288 288 def __init__(self, template_file, queue, **kwargs):
289 289 self.template_file = template_file
290 290 self.queue = queue
291 291
292 292 def parse_job_id(self, output):
293 293 m = re.search(self.job_id_regexp, output)
294 294 if m is not None:
295 295 job_id = m.group()
296 296 else:
297 297 raise Exception("job id couldn't be determined: %s" % output)
298 298 self.job_id = job_id
299 299 log.msg('Job started with job id: %r' % job_id)
300 300 return job_id
301 301
302 302 def handle_error(self, f):
303 303 f.printTraceback()
304 304 f.raiseException()
305 305
306 306 def start(self, n):
307 307 log.msg("starting %d engines" % n)
308 308 self._temp_file = tempfile.NamedTemporaryFile()
309 309 os.chmod(self._temp_file.name, stat.S_IRUSR | stat.S_IWUSR | stat.S_IXUSR)
310 310 if self.template_file:
311 311 log.msg("Using %s script %s" % (self.name, self.template_file))
312 312 contents = open(self.template_file, 'r').read()
313 313 new_script = contents
314 314 regex = re.compile(self.job_array_regexp)
315 315 if not regex.search(contents):
316 316 log.msg("adding job array settings to %s script" % self.name)
317 317 new_script = self.job_array_template % n +'\n' + new_script
318 318 print self.queue_regexp
319 319 regex = re.compile(self.queue_regexp)
320 320 print regex.search(contents)
321 321 if self.queue and not regex.search(contents):
322 322 log.msg("adding queue settings to %s script" % self.name)
323 323 new_script = self.queue_template % self.queue + '\n' + new_script
324 324 if new_script != contents:
325 325 self._temp_file.write(new_script)
326 326 self.template_file = self._temp_file.name
327 327 else:
328 328 default_script = self.default_template % n
329 329 if self.queue:
330 330 default_script = self.queue_template % self.queue + \
331 331 '\n' + default_script
332 332 log.msg("using default ipengine %s script: \n%s" %
333 333 (self.name, default_script))
334 334 self._temp_file.file.write(default_script)
335 335 self.template_file = self._temp_file.name
336 336 self._temp_file.file.close()
337 337 d = getProcessOutput(self.submit_command,
338 338 [self.template_file],
339 339 env=os.environ)
340 340 d.addCallback(self.parse_job_id)
341 341 d.addErrback(self.handle_error)
342 342 return d
343 343
344 344 def kill(self):
345 345 d = getProcessOutput(self.delete_command,
346 346 [self.job_id],env=os.environ)
347 347 return d
348 348
349 349 class PBSEngineSet(BatchEngineSet):
350 350
351 351 name = 'PBS'
352 352 submit_command = 'qsub'
353 353 delete_command = 'qdel'
354 354 job_id_regexp = '\d+'
355 355 job_array_regexp = '#PBS[ \t]+-t[ \t]+\d+'
356 356 job_array_template = '#PBS -t 1-%d'
357 357 queue_regexp = '#PBS[ \t]+-q[ \t]+\w+'
358 358 queue_template = '#PBS -q %s'
359 359 default_template="""#!/bin/sh
360 360 #PBS -V
361 361 #PBS -t 1-%d
362 362 #PBS -N ipengine
363 363 eid=$(($PBS_ARRAYID - 1))
364 364 ipengine --logfile=ipengine${eid}.log
365 365 """
366 366
367 367 class SGEEngineSet(PBSEngineSet):
368 368
369 369 name = 'SGE'
370 370 job_array_regexp = '#\$[ \t]+-t[ \t]+\d+'
371 371 job_array_template = '#$ -t 1-%d'
372 372 queue_regexp = '#\$[ \t]+-q[ \t]+\w+'
373 373 queue_template = '#$ -q %s'
374 374 default_template="""#$ -V
375 375 #$ -S /bin/sh
376 376 #$ -t 1-%d
377 377 #$ -N ipengine
378 378 eid=$(($SGE_TASK_ID - 1))
379 379 ipengine --logfile=ipengine${eid}.log
380 380 """
381 381
382 382 class LSFEngineSet(PBSEngineSet):
383 383
384 384 name = 'LSF'
385 385 submit_command = 'bsub'
386 386 delete_command = 'bkill'
387 387 job_array_regexp = '#BSUB[ \t]-J+\w+\[\d+-\d+\]'
388 388 job_array_template = '#BSUB -J ipengine[1-%d]'
389 389 queue_regexp = '#BSUB[ \t]+-q[ \t]+\w+'
390 390 queue_template = '#BSUB -q %s'
391 391 default_template="""#!/bin/sh
392 392 #BSUB -J ipengine[1-%d]
393 393 eid=$(($LSB_JOBINDEX - 1))
394 394 ipengine --logfile=ipengine${eid}.log
395 395 """
396 396 bsub_wrapper="""#!/bin/sh
397 397 bsub < $1
398 398 """
399 399
400 400 def __init__(self, template_file, queue, **kwargs):
401 401 self._bsub_wrapper = self._make_bsub_wrapper()
402 402 self.submit_command = self._bsub_wrapper.name
403 403 PBSEngineSet.__init__(self,template_file, queue, **kwargs)
404 404
405 405 def _make_bsub_wrapper(self):
406 406 bsub_wrapper = tempfile.NamedTemporaryFile()
407 407 bsub_wrapper.write(self.bsub_wrapper)
408 408 bsub_wrapper.file.close()
409 409 os.chmod(bsub_wrapper.name, stat.S_IRUSR | stat.S_IWUSR | stat.S_IXUSR)
410 410 return bsub_wrapper
411 411
412 412 sshx_template_prefix="""#!/bin/sh
413 413 """
414 414 sshx_template_suffix=""""$@" &> /dev/null &
415 415 echo $!
416 416 """
417 417
418 418 engine_killer_template="""#!/bin/sh
419 419 ps -fu `whoami` | grep '[i]pengine' | awk '{print $2}' | xargs kill -TERM
420 420 """
421 421
422 def escape_strings(val):
423 val = val.replace('(','\(')
424 val = val.replace(')','\)')
425 if ' ' in val:
426 val = '"%s"'%val
427 return val
428
422 429 class SSHEngineSet(object):
423 430 sshx_template_prefix=sshx_template_prefix
424 431 sshx_template_suffix=sshx_template_suffix
425 432 engine_killer_template=engine_killer_template
426 433
427 434 def __init__(self, engine_hosts, sshx=None, copyenvs=None, ipengine="ipengine"):
428 435 """Start a controller on localhost and engines using ssh.
429 436
430 437 The engine_hosts argument is a dict with hostnames as keys and
431 438 the number of engine (int) as values. sshx is the name of a local
432 439 file that will be used to run remote commands. This file is used
433 440 to setup the environment properly.
434 441 """
435 442
436 443 self.temp_dir = tempfile.gettempdir()
437 444 if sshx is not None:
438 445 self.sshx = sshx
439 446 else:
440 447 # Write the sshx.sh file locally from our template.
441 448 self.sshx = os.path.join(
442 449 self.temp_dir,
443 450 '%s-main-sshx.sh' % os.environ['USER']
444 451 )
445 452 f = open(self.sshx, 'w')
446 453 f.writelines(self.sshx_template_prefix)
447 454 if copyenvs:
448 for key, val in os.environ.items():
449 f.writelines('export %s=%s\n'%(key,val))
455 for key, val in sorted(os.environ.items()):
456 newval = escape_strings(val)
457 f.writelines('export %s=%s\n'%(key,newval))
450 458 f.writelines(self.sshx_template_suffix)
451 459 f.close()
452 460 self.engine_command = ipengine
453 461 self.engine_hosts = engine_hosts
454 462 # Write the engine killer script file locally from our template.
455 463 self.engine_killer = os.path.join(
456 464 self.temp_dir,
457 465 '%s-local-engine_killer.sh' % os.environ['USER']
458 466 )
459 467 f = open(self.engine_killer, 'w')
460 468 f.writelines(self.engine_killer_template)
461 469 f.close()
462 470
463 471 def start(self, send_furl=False):
464 472 dlist = []
465 473 for host in self.engine_hosts.keys():
466 474 count = self.engine_hosts[host]
467 475 d = self._start(host, count, send_furl)
468 476 dlist.append(d)
469 477 return gatherBoth(dlist, consumeErrors=True)
470 478
471 479 def _start(self, hostname, count=1, send_furl=False):
472 480 if send_furl:
473 481 d = self._scp_furl(hostname)
474 482 else:
475 483 d = defer.succeed(None)
476 484 d.addCallback(lambda r: self._scp_sshx(hostname))
477 485 d.addCallback(lambda r: self._ssh_engine(hostname, count))
478 486 return d
479 487
480 488 def _scp_furl(self, hostname):
481 489 scp_cmd = "scp ~/.ipython/security/ipcontroller-engine.furl %s:.ipython/security/" % (hostname)
482 490 cmd_list = scp_cmd.split()
483 491 cmd_list[1] = os.path.expanduser(cmd_list[1])
484 492 log.msg('Copying furl file: %s' % scp_cmd)
485 493 d = getProcessOutput(cmd_list[0], cmd_list[1:], env=os.environ)
486 494 return d
487 495
488 496 def _scp_sshx(self, hostname):
489 497 scp_cmd = "scp %s %s:%s/%s-sshx.sh" % (
490 498 self.sshx, hostname,
491 499 self.temp_dir, os.environ['USER']
492 500 )
493 501 print
494 502 log.msg("Copying sshx: %s" % scp_cmd)
495 503 sshx_scp = scp_cmd.split()
496 504 d = getProcessOutput(sshx_scp[0], sshx_scp[1:], env=os.environ)
497 505 return d
498 506
499 507 def _ssh_engine(self, hostname, count):
500 508 exec_engine = "ssh %s sh %s/%s-sshx.sh %s" % (
501 509 hostname, self.temp_dir,
502 510 os.environ['USER'], self.engine_command
503 511 )
504 512 cmds = exec_engine.split()
505 513 dlist = []
506 514 log.msg("about to start engines...")
507 515 for i in range(count):
508 516 log.msg('Starting engines: %s' % exec_engine)
509 517 d = getProcessOutput(cmds[0], cmds[1:], env=os.environ)
510 518 dlist.append(d)
511 519 return gatherBoth(dlist, consumeErrors=True)
512 520
513 521 def kill(self):
514 522 dlist = []
515 523 for host in self.engine_hosts.keys():
516 524 d = self._killall(host)
517 525 dlist.append(d)
518 526 return gatherBoth(dlist, consumeErrors=True)
519 527
520 528 def _killall(self, hostname):
521 529 d = self._scp_engine_killer(hostname)
522 530 d.addCallback(lambda r: self._ssh_kill(hostname))
523 531 # d.addErrback(self._exec_err)
524 532 return d
525 533
526 534 def _scp_engine_killer(self, hostname):
527 535 scp_cmd = "scp %s %s:%s/%s-engine_killer.sh" % (
528 536 self.engine_killer,
529 537 hostname,
530 538 self.temp_dir,
531 539 os.environ['USER']
532 540 )
533 541 cmds = scp_cmd.split()
534 542 log.msg('Copying engine_killer: %s' % scp_cmd)
535 543 d = getProcessOutput(cmds[0], cmds[1:], env=os.environ)
536 544 return d
537 545
538 546 def _ssh_kill(self, hostname):
539 547 kill_cmd = "ssh %s sh %s/%s-engine_killer.sh" % (
540 548 hostname,
541 549 self.temp_dir,
542 550 os.environ['USER']
543 551 )
544 552 log.msg('Killing engine: %s' % kill_cmd)
545 553 kill_cmd = kill_cmd.split()
546 554 d = getProcessOutput(kill_cmd[0], kill_cmd[1:], env=os.environ)
547 555 return d
548 556
549 557 def _exec_err(self, r):
550 558 log.msg(r)
551 559
552 560 #-----------------------------------------------------------------------------
553 561 # Main functions for the different types of clusters
554 562 #-----------------------------------------------------------------------------
555 563
556 564 # TODO:
557 565 # The logic in these codes should be moved into classes like LocalCluster
558 566 # MpirunCluster, PBSCluster, etc. This would remove alot of the duplications.
559 567 # The main functions should then just parse the command line arguments, create
560 568 # the appropriate class and call a 'start' method.
561 569
562 570
563 571 def check_security(args, cont_args):
564 572 """Check to see if we should run with SSL support."""
565 573 if (not args.x or not args.y) and not have_crypto:
566 574 log.err("""
567 575 OpenSSL/pyOpenSSL is not available, so we can't run in secure mode.
568 576 Try running ipcluster with the -xy flags: ipcluster local -xy -n 4""")
569 577 reactor.stop()
570 578 return False
571 579 if args.x:
572 580 cont_args.append('-x')
573 581 if args.y:
574 582 cont_args.append('-y')
575 583 return True
576 584
577 585
578 586 def check_reuse(args, cont_args):
579 587 """Check to see if we should try to resuse FURL files."""
580 588 if args.r:
581 589 cont_args.append('-r')
582 590 if args.client_port == 0 or args.engine_port == 0:
583 591 log.err("""
584 592 To reuse FURL files, you must also set the client and engine ports using
585 593 the --client-port and --engine-port options.""")
586 594 reactor.stop()
587 595 return False
588 596 cont_args.append('--client-port=%i' % args.client_port)
589 597 cont_args.append('--engine-port=%i' % args.engine_port)
590 598 return True
591 599
592 600
593 601 def _err_and_stop(f):
594 602 """Errback to log a failure and halt the reactor on a fatal error."""
595 603 log.err(f)
596 604 reactor.stop()
597 605
598 606
599 607 def _delay_start(cont_pid, start_engines, furl_file, reuse):
600 608 """Wait for controller to create FURL files and the start the engines."""
601 609 if not reuse:
602 610 if os.path.isfile(furl_file):
603 611 os.unlink(furl_file)
604 612 log.msg('Waiting for controller to finish starting...')
605 613 d = wait_for_file(furl_file, delay=0.2, max_tries=50)
606 614 d.addCallback(lambda _: log.msg('Controller started'))
607 615 d.addCallback(lambda _: start_engines(cont_pid))
608 616 return d
609 617
610 618
611 619 def main_local(args):
612 620 cont_args = []
613 621 cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller'))
614 622
615 623 # Check security settings before proceeding
616 624 if not check_security(args, cont_args):
617 625 return
618 626
619 627 # See if we are reusing FURL files
620 628 if not check_reuse(args, cont_args):
621 629 return
622 630
623 631 cl = ControllerLauncher(extra_args=cont_args)
624 632 dstart = cl.start()
625 633 def start_engines(cont_pid):
626 634 engine_args = []
627 635 engine_args.append('--logfile=%s' % \
628 636 pjoin(args.logdir,'ipengine%s-' % cont_pid))
629 637 eset = LocalEngineSet(extra_args=engine_args)
630 638 def shutdown(signum, frame):
631 639 log.msg('Stopping local cluster')
632 640 # We are still playing with the times here, but these seem
633 641 # to be reliable in allowing everything to exit cleanly.
634 642 eset.interrupt_then_kill(0.5)
635 643 cl.interrupt_then_kill(0.5)
636 644 reactor.callLater(1.0, reactor.stop)
637 645 signal.signal(signal.SIGINT,shutdown)
638 646 d = eset.start(args.n)
639 647 return d
640 648 config = kernel_config_manager.get_config_obj()
641 649 furl_file = config['controller']['engine_furl_file']
642 650 dstart.addCallback(_delay_start, start_engines, furl_file, args.r)
643 651 dstart.addErrback(_err_and_stop)
644 652
645 653
646 654 def main_mpi(args):
647 655 cont_args = []
648 656 cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller'))
649 657
650 658 # Check security settings before proceeding
651 659 if not check_security(args, cont_args):
652 660 return
653 661
654 662 # See if we are reusing FURL files
655 663 if not check_reuse(args, cont_args):
656 664 return
657 665
658 666 cl = ControllerLauncher(extra_args=cont_args)
659 667 dstart = cl.start()
660 668 def start_engines(cont_pid):
661 669 raw_args = [args.cmd]
662 670 raw_args.extend(['-n',str(args.n)])
663 671 raw_args.append('ipengine')
664 672 raw_args.append('-l')
665 673 raw_args.append(pjoin(args.logdir,'ipengine%s-' % cont_pid))
666 674 if args.mpi:
667 675 raw_args.append('--mpi=%s' % args.mpi)
668 676 eset = ProcessLauncher(raw_args)
669 677 def shutdown(signum, frame):
670 678 log.msg('Stopping local cluster')
671 679 # We are still playing with the times here, but these seem
672 680 # to be reliable in allowing everything to exit cleanly.
673 681 eset.interrupt_then_kill(1.0)
674 682 cl.interrupt_then_kill(1.0)
675 683 reactor.callLater(2.0, reactor.stop)
676 684 signal.signal(signal.SIGINT,shutdown)
677 685 d = eset.start()
678 686 return d
679 687 config = kernel_config_manager.get_config_obj()
680 688 furl_file = config['controller']['engine_furl_file']
681 689 dstart.addCallback(_delay_start, start_engines, furl_file, args.r)
682 690 dstart.addErrback(_err_and_stop)
683 691
684 692
685 693 def main_pbs(args):
686 694 cont_args = []
687 695 cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller'))
688 696
689 697 # Check security settings before proceeding
690 698 if not check_security(args, cont_args):
691 699 return
692 700
693 701 # See if we are reusing FURL files
694 702 if not check_reuse(args, cont_args):
695 703 return
696 704
697 705 if args.pbsscript and not os.path.isfile(args.pbsscript):
698 706 log.err('PBS script does not exist: %s' % args.pbsscript)
699 707 return
700 708
701 709 cl = ControllerLauncher(extra_args=cont_args)
702 710 dstart = cl.start()
703 711 def start_engines(r):
704 712 pbs_set = PBSEngineSet(args.pbsscript, args.pbsqueue)
705 713 def shutdown(signum, frame):
706 714 log.msg('Stopping PBS cluster')
707 715 d = pbs_set.kill()
708 716 d.addBoth(lambda _: cl.interrupt_then_kill(1.0))
709 717 d.addBoth(lambda _: reactor.callLater(2.0, reactor.stop))
710 718 signal.signal(signal.SIGINT,shutdown)
711 719 d = pbs_set.start(args.n)
712 720 return d
713 721 config = kernel_config_manager.get_config_obj()
714 722 furl_file = config['controller']['engine_furl_file']
715 723 dstart.addCallback(_delay_start, start_engines, furl_file, args.r)
716 724 dstart.addErrback(_err_and_stop)
717 725
718 726 def main_sge(args):
719 727 cont_args = []
720 728 cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller'))
721 729
722 730 # Check security settings before proceeding
723 731 if not check_security(args, cont_args):
724 732 return
725 733
726 734 # See if we are reusing FURL files
727 735 if not check_reuse(args, cont_args):
728 736 return
729 737
730 738 if args.sgescript and not os.path.isfile(args.sgescript):
731 739 log.err('SGE script does not exist: %s' % args.sgescript)
732 740 return
733 741
734 742 cl = ControllerLauncher(extra_args=cont_args)
735 743 dstart = cl.start()
736 744 def start_engines(r):
737 745 sge_set = SGEEngineSet(args.sgescript, args.sgequeue)
738 746 def shutdown(signum, frame):
739 747 log.msg('Stopping sge cluster')
740 748 d = sge_set.kill()
741 749 d.addBoth(lambda _: cl.interrupt_then_kill(1.0))
742 750 d.addBoth(lambda _: reactor.callLater(2.0, reactor.stop))
743 751 signal.signal(signal.SIGINT,shutdown)
744 752 d = sge_set.start(args.n)
745 753 return d
746 754 config = kernel_config_manager.get_config_obj()
747 755 furl_file = config['controller']['engine_furl_file']
748 756 dstart.addCallback(_delay_start, start_engines, furl_file, args.r)
749 757 dstart.addErrback(_err_and_stop)
750 758
751 759 def main_lsf(args):
752 760 cont_args = []
753 761 cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller'))
754 762
755 763 # Check security settings before proceeding
756 764 if not check_security(args, cont_args):
757 765 return
758 766
759 767 # See if we are reusing FURL files
760 768 if not check_reuse(args, cont_args):
761 769 return
762 770
763 771 if args.lsfscript and not os.path.isfile(args.lsfscript):
764 772 log.err('LSF script does not exist: %s' % args.lsfscript)
765 773 return
766 774
767 775 cl = ControllerLauncher(extra_args=cont_args)
768 776 dstart = cl.start()
769 777 def start_engines(r):
770 778 lsf_set = LSFEngineSet(args.lsfscript, args.lsfqueue)
771 779 def shutdown(signum, frame):
772 780 log.msg('Stopping LSF cluster')
773 781 d = lsf_set.kill()
774 782 d.addBoth(lambda _: cl.interrupt_then_kill(1.0))
775 783 d.addBoth(lambda _: reactor.callLater(2.0, reactor.stop))
776 784 signal.signal(signal.SIGINT,shutdown)
777 785 d = lsf_set.start(args.n)
778 786 return d
779 787 config = kernel_config_manager.get_config_obj()
780 788 furl_file = config['controller']['engine_furl_file']
781 789 dstart.addCallback(_delay_start, start_engines, furl_file, args.r)
782 790 dstart.addErrback(_err_and_stop)
783 791
784 792
785 793 def main_ssh(args):
786 794 """Start a controller on localhost and engines using ssh.
787 795
788 796 Your clusterfile should look like::
789 797
790 798 send_furl = False # True, if you want
791 799 engines = {
792 800 'engine_host1' : engine_count,
793 801 'engine_host2' : engine_count2
794 802 }
795 803 """
796 804 clusterfile = {}
797 805 execfile(args.clusterfile, clusterfile)
798 806 if not clusterfile.has_key('send_furl'):
799 807 clusterfile['send_furl'] = False
800 808
801 809 cont_args = []
802 810 cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller'))
803 811
804 812 # Check security settings before proceeding
805 813 if not check_security(args, cont_args):
806 814 return
807 815
808 816 # See if we are reusing FURL files
809 817 if not check_reuse(args, cont_args):
810 818 return
811 819
812 820 cl = ControllerLauncher(extra_args=cont_args)
813 821 dstart = cl.start()
814 822 def start_engines(cont_pid):
815 823 ssh_set = SSHEngineSet(clusterfile['engines'], sshx=args.sshx,
816 824 copyenvs=args.copyenvs)
817 825 def shutdown(signum, frame):
818 826 d = ssh_set.kill()
819 827 cl.interrupt_then_kill(1.0)
820 828 reactor.callLater(2.0, reactor.stop)
821 829 signal.signal(signal.SIGINT,shutdown)
822 830 d = ssh_set.start(clusterfile['send_furl'])
823 831 return d
824 832 config = kernel_config_manager.get_config_obj()
825 833 furl_file = config['controller']['engine_furl_file']
826 834 dstart.addCallback(_delay_start, start_engines, furl_file, args.r)
827 835 dstart.addErrback(_err_and_stop)
828 836
829 837
830 838 def get_args():
831 839 base_parser = argparse.ArgumentParser(add_help=False)
832 840 base_parser.add_argument(
833 841 '-r',
834 842 action='store_true',
835 843 dest='r',
836 844 help='try to reuse FURL files. Use with --client-port and --engine-port'
837 845 )
838 846 base_parser.add_argument(
839 847 '--client-port',
840 848 type=int,
841 849 dest='client_port',
842 850 help='the port the controller will listen on for client connections',
843 851 default=0
844 852 )
845 853 base_parser.add_argument(
846 854 '--engine-port',
847 855 type=int,
848 856 dest='engine_port',
849 857 help='the port the controller will listen on for engine connections',
850 858 default=0
851 859 )
852 860 base_parser.add_argument(
853 861 '-x',
854 862 action='store_true',
855 863 dest='x',
856 864 help='turn off client security'
857 865 )
858 866 base_parser.add_argument(
859 867 '-y',
860 868 action='store_true',
861 869 dest='y',
862 870 help='turn off engine security'
863 871 )
864 872 base_parser.add_argument(
865 873 "--logdir",
866 874 type=str,
867 875 dest="logdir",
868 876 help="directory to put log files (default=$IPYTHONDIR/log)",
869 877 default=pjoin(get_ipython_dir(),'log')
870 878 )
871 879 base_parser.add_argument(
872 880 "-n",
873 881 "--num",
874 882 type=int,
875 883 dest="n",
876 884 default=2,
877 885 help="the number of engines to start"
878 886 )
879 887
880 888 parser = argparse.ArgumentParser(
881 889 description='IPython cluster startup. This starts a controller and\
882 890 engines using various approaches. Use the IPYTHONDIR environment\
883 891 variable to change your IPython directory from the default of\
884 892 .ipython or _ipython. The log and security subdirectories of your\
885 893 IPython directory will be used by this script for log files and\
886 894 security files.'
887 895 )
888 896 subparsers = parser.add_subparsers(
889 897 help='available cluster types. For help, do "ipcluster TYPE --help"')
890 898
891 899 parser_local = subparsers.add_parser(
892 900 'local',
893 901 help='run a local cluster',
894 902 parents=[base_parser]
895 903 )
896 904 parser_local.set_defaults(func=main_local)
897 905
898 906 parser_mpirun = subparsers.add_parser(
899 907 'mpirun',
900 908 help='run a cluster using mpirun (mpiexec also works)',
901 909 parents=[base_parser]
902 910 )
903 911 parser_mpirun.add_argument(
904 912 "--mpi",
905 913 type=str,
906 914 dest="mpi", # Don't put a default here to allow no MPI support
907 915 help="how to call MPI_Init (default=mpi4py)"
908 916 )
909 917 parser_mpirun.set_defaults(func=main_mpi, cmd='mpirun')
910 918
911 919 parser_mpiexec = subparsers.add_parser(
912 920 'mpiexec',
913 921 help='run a cluster using mpiexec (mpirun also works)',
914 922 parents=[base_parser]
915 923 )
916 924 parser_mpiexec.add_argument(
917 925 "--mpi",
918 926 type=str,
919 927 dest="mpi", # Don't put a default here to allow no MPI support
920 928 help="how to call MPI_Init (default=mpi4py)"
921 929 )
922 930 parser_mpiexec.set_defaults(func=main_mpi, cmd='mpiexec')
923 931
924 932 parser_pbs = subparsers.add_parser(
925 933 'pbs',
926 934 help='run a pbs cluster',
927 935 parents=[base_parser]
928 936 )
929 937 parser_pbs.add_argument(
930 938 '-s',
931 939 '--pbs-script',
932 940 type=str,
933 941 dest='pbsscript',
934 942 help='PBS script template',
935 943 default=''
936 944 )
937 945 parser_pbs.add_argument(
938 946 '-q',
939 947 '--queue',
940 948 type=str,
941 949 dest='pbsqueue',
942 950 help='PBS queue to use when starting the engines',
943 951 default=None,
944 952 )
945 953 parser_pbs.set_defaults(func=main_pbs)
946 954
947 955 parser_sge = subparsers.add_parser(
948 956 'sge',
949 957 help='run an sge cluster',
950 958 parents=[base_parser]
951 959 )
952 960 parser_sge.add_argument(
953 961 '-s',
954 962 '--sge-script',
955 963 type=str,
956 964 dest='sgescript',
957 965 help='SGE script template',
958 966 default='' # SGEEngineSet will create one if not specified
959 967 )
960 968 parser_sge.add_argument(
961 969 '-q',
962 970 '--queue',
963 971 type=str,
964 972 dest='sgequeue',
965 973 help='SGE queue to use when starting the engines',
966 974 default=None,
967 975 )
968 976 parser_sge.set_defaults(func=main_sge)
969 977
970 978 parser_lsf = subparsers.add_parser(
971 979 'lsf',
972 980 help='run an lsf cluster',
973 981 parents=[base_parser]
974 982 )
975 983
976 984 parser_lsf.add_argument(
977 985 '-s',
978 986 '--lsf-script',
979 987 type=str,
980 988 dest='lsfscript',
981 989 help='LSF script template',
982 990 default='' # LSFEngineSet will create one if not specified
983 991 )
984 992
985 993 parser_lsf.add_argument(
986 994 '-q',
987 995 '--queue',
988 996 type=str,
989 997 dest='lsfqueue',
990 998 help='LSF queue to use when starting the engines',
991 999 default=None,
992 1000 )
993 1001 parser_lsf.set_defaults(func=main_lsf)
994 1002
995 1003 parser_ssh = subparsers.add_parser(
996 1004 'ssh',
997 1005 help='run a cluster using ssh, should have ssh-keys setup',
998 1006 parents=[base_parser]
999 1007 )
1000 1008 parser_ssh.add_argument(
1001 1009 '-e',
1002 1010 '--copyenvs',
1003 1011 action='store_true',
1004 1012 dest='copyenvs',
1005 1013 help='Copy current shell environment to remote location',
1006 1014 default=False,
1007 1015 )
1008 1016 parser_ssh.add_argument(
1009 1017 '--clusterfile',
1010 1018 type=str,
1011 1019 dest='clusterfile',
1012 1020 help='python file describing the cluster',
1013 1021 default='clusterfile.py',
1014 1022 )
1015 1023 parser_ssh.add_argument(
1016 1024 '--sshx',
1017 1025 type=str,
1018 1026 dest='sshx',
1019 1027 help='sshx launcher helper'
1020 1028 )
1021 1029 parser_ssh.set_defaults(func=main_ssh)
1022 1030
1023 1031 args = parser.parse_args()
1024 1032 return args
1025 1033
1026 1034 def main():
1027 1035 args = get_args()
1028 1036 reactor.callWhenRunning(args.func, args)
1029 1037 log.startLogging(sys.stdout)
1030 1038 reactor.run()
1031 1039
1032 1040 if __name__ == '__main__':
1033 1041 main()
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