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1 | # -*- coding: utf-8 -*- |
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1 | # -*- coding: utf-8 -*- | |
2 | """Pylab (matplotlib) support utilities. |
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2 | """Pylab (matplotlib) support utilities. | |
3 |
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3 | |||
4 | Authors |
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4 | Authors | |
5 | ------- |
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5 | ------- | |
6 |
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6 | |||
7 | * Fernando Perez. |
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7 | * Fernando Perez. | |
8 | * Brian Granger |
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8 | * Brian Granger | |
9 | """ |
|
9 | """ | |
10 |
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10 | |||
11 | #----------------------------------------------------------------------------- |
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11 | #----------------------------------------------------------------------------- | |
12 | # Copyright (C) 2009 The IPython Development Team |
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12 | # Copyright (C) 2009 The IPython Development Team | |
13 | # |
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13 | # | |
14 | # Distributed under the terms of the BSD License. The full license is in |
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14 | # Distributed under the terms of the BSD License. The full license is in | |
15 | # the file COPYING, distributed as part of this software. |
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15 | # the file COPYING, distributed as part of this software. | |
16 | #----------------------------------------------------------------------------- |
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16 | #----------------------------------------------------------------------------- | |
17 |
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17 | |||
18 | #----------------------------------------------------------------------------- |
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18 | #----------------------------------------------------------------------------- | |
19 | # Imports |
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19 | # Imports | |
20 | #----------------------------------------------------------------------------- |
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20 | #----------------------------------------------------------------------------- | |
21 |
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21 | |||
22 | from cStringIO import StringIO |
|
22 | from cStringIO import StringIO | |
23 |
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23 | |||
24 | from IPython.utils.decorators import flag_calls |
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24 | from IPython.utils.decorators import flag_calls | |
25 |
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25 | |||
26 | # If user specifies a GUI, that dictates the backend, otherwise we read the |
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26 | # If user specifies a GUI, that dictates the backend, otherwise we read the | |
27 | # user's mpl default from the mpl rc structure |
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27 | # user's mpl default from the mpl rc structure | |
28 | backends = {'tk': 'TkAgg', |
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28 | backends = {'tk': 'TkAgg', | |
29 | 'gtk': 'GTKAgg', |
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29 | 'gtk': 'GTKAgg', | |
30 | 'wx': 'WXAgg', |
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30 | 'wx': 'WXAgg', | |
31 | 'qt': 'Qt4Agg', # qt3 not supported |
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31 | 'qt': 'Qt4Agg', # qt3 not supported | |
32 | 'qt4': 'Qt4Agg', |
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32 | 'qt4': 'Qt4Agg', | |
33 | 'inline' : 'module://IPython.zmq.pylab.backend_inline'} |
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33 | 'inline' : 'module://IPython.zmq.pylab.backend_inline'} | |
34 |
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34 | |||
35 | #----------------------------------------------------------------------------- |
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35 | #----------------------------------------------------------------------------- | |
36 | # Matplotlib utilities |
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36 | # Matplotlib utilities | |
37 | #----------------------------------------------------------------------------- |
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37 | #----------------------------------------------------------------------------- | |
38 |
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38 | |||
39 |
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39 | |||
40 | def getfigs(*fig_nums): |
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40 | def getfigs(*fig_nums): | |
41 | """Get a list of matplotlib figures by figure numbers. |
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41 | """Get a list of matplotlib figures by figure numbers. | |
42 |
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42 | |||
43 | If no arguments are given, all available figures are returned. If the |
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43 | If no arguments are given, all available figures are returned. If the | |
44 | argument list contains references to invalid figures, a warning is printed |
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44 | argument list contains references to invalid figures, a warning is printed | |
45 | but the function continues pasting further figures. |
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45 | but the function continues pasting further figures. | |
46 |
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46 | |||
47 | Parameters |
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47 | Parameters | |
48 | ---------- |
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48 | ---------- | |
49 | figs : tuple |
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49 | figs : tuple | |
50 | A tuple of ints giving the figure numbers of the figures to return. |
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50 | A tuple of ints giving the figure numbers of the figures to return. | |
51 | """ |
|
51 | """ | |
52 | from matplotlib._pylab_helpers import Gcf |
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52 | from matplotlib._pylab_helpers import Gcf | |
53 | if not fig_nums: |
|
53 | if not fig_nums: | |
54 | fig_managers = Gcf.get_all_fig_managers() |
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54 | fig_managers = Gcf.get_all_fig_managers() | |
55 | return [fm.canvas.figure for fm in fig_managers] |
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55 | return [fm.canvas.figure for fm in fig_managers] | |
56 | else: |
|
56 | else: | |
57 | figs = [] |
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57 | figs = [] | |
58 | for num in fig_nums: |
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58 | for num in fig_nums: | |
59 | f = Gcf.figs.get(num) |
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59 | f = Gcf.figs.get(num) | |
60 | if f is None: |
|
60 | if f is None: | |
61 | print('Warning: figure %s not available.' % num) |
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61 | print('Warning: figure %s not available.' % num) | |
62 | figs.append(f.canvas.figure) |
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62 | figs.append(f.canvas.figure) | |
63 | return figs |
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63 | return figs | |
64 |
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64 | |||
65 |
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65 | |||
66 | def figsize(sizex, sizey): |
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66 | def figsize(sizex, sizey): | |
67 | """Set the default figure size to be [sizex, sizey]. |
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67 | """Set the default figure size to be [sizex, sizey]. | |
68 |
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68 | |||
69 | This is just an easy to remember, convenience wrapper that sets:: |
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69 | This is just an easy to remember, convenience wrapper that sets:: | |
70 |
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70 | |||
71 | matplotlib.rcParams['figure.figsize'] = [sizex, sizey] |
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71 | matplotlib.rcParams['figure.figsize'] = [sizex, sizey] | |
72 | """ |
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72 | """ | |
73 | import matplotlib |
|
73 | import matplotlib | |
74 | matplotlib.rcParams['figure.figsize'] = [sizex, sizey] |
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74 | matplotlib.rcParams['figure.figsize'] = [sizex, sizey] | |
75 |
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75 | |||
76 |
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76 | |||
77 | def figure_to_svg(fig): |
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77 | def figure_to_svg(fig): | |
78 | """Convert a figure to svg for inline display.""" |
|
78 | """Convert a figure to svg for inline display.""" | |
79 | fc = fig.get_facecolor() |
|
79 | fc = fig.get_facecolor() | |
80 | ec = fig.get_edgecolor() |
|
80 | ec = fig.get_edgecolor() | |
81 | fig.set_facecolor('white') |
|
81 | fig.set_facecolor('white') | |
82 | fig.set_edgecolor('white') |
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82 | fig.set_edgecolor('white') | |
83 | try: |
|
83 | try: | |
84 | string_io = StringIO() |
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84 | string_io = StringIO() | |
85 | fig.canvas.print_figure(string_io, format='svg') |
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85 | fig.canvas.print_figure(string_io, format='svg') | |
86 | svg = string_io.getvalue() |
|
86 | svg = string_io.getvalue() | |
87 | finally: |
|
87 | finally: | |
88 | fig.set_facecolor(fc) |
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88 | fig.set_facecolor(fc) | |
89 | fig.set_edgecolor(ec) |
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89 | fig.set_edgecolor(ec) | |
90 | return svg |
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90 | return svg | |
91 |
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91 | |||
92 |
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92 | |||
93 | # We need a little factory function here to create the closure where |
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93 | # We need a little factory function here to create the closure where | |
94 | # safe_execfile can live. |
|
94 | # safe_execfile can live. | |
95 | def mpl_runner(safe_execfile): |
|
95 | def mpl_runner(safe_execfile): | |
96 | """Factory to return a matplotlib-enabled runner for %run. |
|
96 | """Factory to return a matplotlib-enabled runner for %run. | |
97 |
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97 | |||
98 | Parameters |
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98 | Parameters | |
99 | ---------- |
|
99 | ---------- | |
100 | safe_execfile : function |
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100 | safe_execfile : function | |
101 | This must be a function with the same interface as the |
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101 | This must be a function with the same interface as the | |
102 | :meth:`safe_execfile` method of IPython. |
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102 | :meth:`safe_execfile` method of IPython. | |
103 |
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103 | |||
104 | Returns |
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104 | Returns | |
105 | ------- |
|
105 | ------- | |
106 | A function suitable for use as the ``runner`` argument of the %run magic |
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106 | A function suitable for use as the ``runner`` argument of the %run magic | |
107 | function. |
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107 | function. | |
108 | """ |
|
108 | """ | |
109 |
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109 | |||
110 | def mpl_execfile(fname,*where,**kw): |
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110 | def mpl_execfile(fname,*where,**kw): | |
111 | """matplotlib-aware wrapper around safe_execfile. |
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111 | """matplotlib-aware wrapper around safe_execfile. | |
112 |
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112 | |||
113 | Its interface is identical to that of the :func:`execfile` builtin. |
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113 | Its interface is identical to that of the :func:`execfile` builtin. | |
114 |
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114 | |||
115 | This is ultimately a call to execfile(), but wrapped in safeties to |
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115 | This is ultimately a call to execfile(), but wrapped in safeties to | |
116 | properly handle interactive rendering.""" |
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116 | properly handle interactive rendering.""" | |
117 |
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117 | |||
118 | import matplotlib |
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118 | import matplotlib | |
119 | import matplotlib.pylab as pylab |
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119 | import matplotlib.pylab as pylab | |
120 |
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120 | |||
121 | #print '*** Matplotlib runner ***' # dbg |
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121 | #print '*** Matplotlib runner ***' # dbg | |
122 | # turn off rendering until end of script |
|
122 | # turn off rendering until end of script | |
123 | is_interactive = matplotlib.rcParams['interactive'] |
|
123 | is_interactive = matplotlib.rcParams['interactive'] | |
124 | matplotlib.interactive(False) |
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124 | matplotlib.interactive(False) | |
125 | safe_execfile(fname,*where,**kw) |
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125 | safe_execfile(fname,*where,**kw) | |
126 | matplotlib.interactive(is_interactive) |
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126 | matplotlib.interactive(is_interactive) | |
127 | # make rendering call now, if the user tried to do it |
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127 | # make rendering call now, if the user tried to do it | |
128 | if pylab.draw_if_interactive.called: |
|
128 | if pylab.draw_if_interactive.called: | |
129 | pylab.draw() |
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129 | pylab.draw() | |
130 | pylab.draw_if_interactive.called = False |
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130 | pylab.draw_if_interactive.called = False | |
131 |
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131 | |||
132 | return mpl_execfile |
|
132 | return mpl_execfile | |
133 |
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133 | |||
134 |
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134 | |||
135 | #----------------------------------------------------------------------------- |
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135 | #----------------------------------------------------------------------------- | |
136 | # Code for initializing matplotlib and importing pylab |
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136 | # Code for initializing matplotlib and importing pylab | |
137 | #----------------------------------------------------------------------------- |
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137 | #----------------------------------------------------------------------------- | |
138 |
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138 | |||
139 |
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139 | |||
140 | def find_gui_and_backend(gui=None): |
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140 | def find_gui_and_backend(gui=None): | |
141 | """Given a gui string return the gui and mpl backend. |
|
141 | """Given a gui string return the gui and mpl backend. | |
142 |
|
142 | |||
143 | Parameters |
|
143 | Parameters | |
144 | ---------- |
|
144 | ---------- | |
145 | gui : str |
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145 | gui : str | |
146 | Can be one of ('tk','gtk','wx','qt','qt4','inline'). |
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146 | Can be one of ('tk','gtk','wx','qt','qt4','inline'). | |
147 |
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147 | |||
148 | Returns |
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148 | Returns | |
149 | ------- |
|
149 | ------- | |
150 | A tuple of (gui, backend) where backend is one of ('TkAgg','GTKAgg', |
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150 | A tuple of (gui, backend) where backend is one of ('TkAgg','GTKAgg', | |
151 | 'WXAgg','Qt4Agg','module://IPython.zmq.pylab.backend_inline'). |
|
151 | 'WXAgg','Qt4Agg','module://IPython.zmq.pylab.backend_inline'). | |
152 | """ |
|
152 | """ | |
153 |
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153 | |||
154 | import matplotlib |
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154 | import matplotlib | |
155 |
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155 | |||
156 | if gui: |
|
156 | if gui: | |
157 | # select backend based on requested gui |
|
157 | # select backend based on requested gui | |
158 | backend = backends[gui] |
|
158 | backend = backends[gui] | |
159 | else: |
|
159 | else: | |
160 | backend = matplotlib.rcParams['backend'] |
|
160 | backend = matplotlib.rcParams['backend'] | |
161 | # In this case, we need to find what the appropriate gui selection call |
|
161 | # In this case, we need to find what the appropriate gui selection call | |
162 | # should be for IPython, so we can activate inputhook accordingly |
|
162 | # should be for IPython, so we can activate inputhook accordingly | |
163 | g2b = backends # maps gui names to mpl backend names |
|
163 | g2b = backends # maps gui names to mpl backend names | |
164 | b2g = dict(zip(g2b.values(), g2b.keys())) # reverse dict |
|
164 | b2g = dict(zip(g2b.values(), g2b.keys())) # reverse dict | |
165 | gui = b2g.get(backend, None) |
|
165 | gui = b2g.get(backend, None) | |
166 | return gui, backend |
|
166 | return gui, backend | |
167 |
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167 | |||
168 |
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168 | |||
169 | def activate_matplotlib(backend): |
|
169 | def activate_matplotlib(backend): | |
170 | """Activate the given backend and set interactive to True.""" |
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170 | """Activate the given backend and set interactive to True.""" | |
171 |
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171 | |||
172 | import matplotlib |
|
172 | import matplotlib | |
173 | if backend.startswith('module://'): |
|
173 | if backend.startswith('module://'): | |
174 | # Work around bug in matplotlib: matplotlib.use converts the |
|
174 | # Work around bug in matplotlib: matplotlib.use converts the | |
175 | # backend_id to lowercase even if a module name is specified! |
|
175 | # backend_id to lowercase even if a module name is specified! | |
176 | matplotlib.rcParams['backend'] = backend |
|
176 | matplotlib.rcParams['backend'] = backend | |
177 | else: |
|
177 | else: | |
178 | matplotlib.use(backend) |
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178 | matplotlib.use(backend) | |
179 | matplotlib.interactive(True) |
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179 | matplotlib.interactive(True) | |
180 |
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180 | |||
181 | # This must be imported last in the matplotlib series, after |
|
181 | # This must be imported last in the matplotlib series, after | |
182 | # backend/interactivity choices have been made |
|
182 | # backend/interactivity choices have been made | |
183 | import matplotlib.pylab as pylab |
|
183 | import matplotlib.pylab as pylab | |
184 |
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184 | |||
185 | # XXX For now leave this commented out, but depending on discussions with |
|
185 | # XXX For now leave this commented out, but depending on discussions with | |
186 | # mpl-dev, we may be able to allow interactive switching... |
|
186 | # mpl-dev, we may be able to allow interactive switching... | |
187 | #import matplotlib.pyplot |
|
187 | #import matplotlib.pyplot | |
188 | #matplotlib.pyplot.switch_backend(backend) |
|
188 | #matplotlib.pyplot.switch_backend(backend) | |
189 |
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189 | |||
190 | pylab.show._needmain = False |
|
190 | pylab.show._needmain = False | |
191 | # We need to detect at runtime whether show() is called by the user. |
|
191 | # We need to detect at runtime whether show() is called by the user. | |
192 | # For this, we wrap it into a decorator which adds a 'called' flag. |
|
192 | # For this, we wrap it into a decorator which adds a 'called' flag. | |
193 | pylab.draw_if_interactive = flag_calls(pylab.draw_if_interactive) |
|
193 | pylab.draw_if_interactive = flag_calls(pylab.draw_if_interactive) | |
194 |
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194 | |||
195 |
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195 | |||
196 | def import_pylab(user_ns, backend, import_all=True, shell=None): |
|
196 | def import_pylab(user_ns, backend, import_all=True, shell=None): | |
197 | """Import the standard pylab symbols into user_ns.""" |
|
197 | """Import the standard pylab symbols into user_ns.""" | |
198 |
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198 | |||
199 | # Import numpy as np/pyplot as plt are conventions we're trying to |
|
199 | # Import numpy as np/pyplot as plt are conventions we're trying to | |
200 | # somewhat standardize on. Making them available to users by default |
|
200 | # somewhat standardize on. Making them available to users by default | |
201 | # will greatly help this. |
|
201 | # will greatly help this. | |
202 | s = ("import numpy\n" |
|
202 | s = ("import numpy\n" | |
203 | "import matplotlib\n" |
|
203 | "import matplotlib\n" | |
204 | "from matplotlib import pylab, mlab, pyplot\n" |
|
204 | "from matplotlib import pylab, mlab, pyplot\n" | |
205 | "np = numpy\n" |
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205 | "np = numpy\n" | |
206 | "plt = pyplot\n" |
|
206 | "plt = pyplot\n" | |
207 | ) |
|
207 | ) | |
208 | exec s in user_ns |
|
208 | exec s in user_ns | |
209 |
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209 | |||
210 | if shell is not None: |
|
210 | if shell is not None: | |
211 | exec s in shell.user_ns_hidden |
|
211 | exec s in shell.user_ns_hidden | |
212 | # If using our svg payload backend, register the post-execution |
|
212 | # If using our svg payload backend, register the post-execution | |
213 | # function that will pick up the results for display. This can only be |
|
213 | # function that will pick up the results for display. This can only be | |
214 | # done with access to the real shell object. |
|
214 | # done with access to the real shell object. | |
215 | if backend == backends['inline']: |
|
215 | if backend == backends['inline']: | |
216 | from IPython.zmq.pylab.backend_inline import flush_svg |
|
216 | from IPython.zmq.pylab.backend_inline import flush_svg | |
217 | from matplotlib import pyplot |
|
217 | from matplotlib import pyplot | |
218 | shell.register_post_execute(flush_svg) |
|
218 | shell.register_post_execute(flush_svg) | |
219 |
# The typical default figure size is too large for inline use |
|
219 | # The typical default figure size is too large for inline use, | |
220 | # might make this a user-configurable parameter later. |
|
220 | # so we shrink the figure size to 6x4, and tweak fonts to | |
221 | figsize(6.0, 4.0) |
|
221 | # make that fit. This is configurable via Global.inline_rc, | |
222 | # 12pt labels get cutoff on 6x4 logplots, so use 10pt. |
|
222 | # or rather it will be once the zmq kernel is hooked up to | |
223 | pyplot.rcParams['font.size'] = 10 |
|
223 | # the config system. | |
224 | # 10pt still needs a little more room on the xlabel: |
|
224 | ||
225 | pyplot.rcParams['figure.subplot.bottom'] = .125 |
|
225 | default_rc = { | |
|
226 | 'figure.figsize': (6.0,4.0), | |||
|
227 | # 12pt labels get cutoff on 6x4 logplots, so use 10pt. | |||
|
228 | 'font.size': 10, | |||
|
229 | # 10pt still needs a little more room on the xlabel: | |||
|
230 | 'figure.subplot.bottom' : .125 | |||
|
231 | } | |||
|
232 | rc = getattr(shell.config.Global, 'inline_rc', default_rc) | |||
|
233 | pyplot.rcParams.update(rc) | |||
|
234 | shell.config.Global.inline_rc = rc | |||
|
235 | ||||
226 | # Add 'figsize' to pyplot and to the user's namespace |
|
236 | # Add 'figsize' to pyplot and to the user's namespace | |
227 | user_ns['figsize'] = pyplot.figsize = figsize |
|
237 | user_ns['figsize'] = pyplot.figsize = figsize | |
228 | shell.user_ns_hidden['figsize'] = figsize |
|
238 | shell.user_ns_hidden['figsize'] = figsize | |
229 |
|
239 | |||
230 | # The old pastefig function has been replaced by display |
|
240 | # The old pastefig function has been replaced by display | |
231 | # Always add this svg formatter so display works. |
|
241 | # Always add this svg formatter so display works. | |
232 | from IPython.zmq.pylab.backend_inline import figure_to_svg |
|
242 | from IPython.zmq.pylab.backend_inline import figure_to_svg | |
233 | from IPython.core.display import display, display_svg |
|
243 | from IPython.core.display import display, display_svg | |
234 | svg_formatter = shell.display_formatter.formatters['image/svg+xml'] |
|
244 | svg_formatter = shell.display_formatter.formatters['image/svg+xml'] | |
235 | svg_formatter.for_type_by_name( |
|
245 | svg_formatter.for_type_by_name( | |
236 | 'matplotlib.figure','Figure',figure_to_svg |
|
246 | 'matplotlib.figure','Figure',figure_to_svg | |
237 | ) |
|
247 | ) | |
238 | # Add display and display_png to the user's namespace |
|
248 | # Add display and display_png to the user's namespace | |
239 | user_ns['display'] = display |
|
249 | user_ns['display'] = display | |
240 | shell.user_ns_hidden['display'] = display |
|
250 | shell.user_ns_hidden['display'] = display | |
241 | user_ns['display_svg'] = display_svg |
|
251 | user_ns['display_svg'] = display_svg | |
242 | shell.user_ns_hidden['display_svg'] = display_svg |
|
252 | shell.user_ns_hidden['display_svg'] = display_svg | |
243 | user_ns['getfigs'] = getfigs |
|
253 | user_ns['getfigs'] = getfigs | |
244 | shell.user_ns_hidden['getfigs'] = getfigs |
|
254 | shell.user_ns_hidden['getfigs'] = getfigs | |
245 |
|
255 | |||
246 | if import_all: |
|
256 | if import_all: | |
247 | s = ("from matplotlib.pylab import *\n" |
|
257 | s = ("from matplotlib.pylab import *\n" | |
248 | "from numpy import *\n") |
|
258 | "from numpy import *\n") | |
249 | exec s in user_ns |
|
259 | exec s in user_ns | |
250 | if shell is not None: |
|
260 | if shell is not None: | |
251 | exec s in shell.user_ns_hidden |
|
261 | exec s in shell.user_ns_hidden | |
252 |
|
262 | |||
253 |
|
263 | |||
254 | def pylab_activate(user_ns, gui=None, import_all=True): |
|
264 | def pylab_activate(user_ns, gui=None, import_all=True): | |
255 | """Activate pylab mode in the user's namespace. |
|
265 | """Activate pylab mode in the user's namespace. | |
256 |
|
266 | |||
257 | Loads and initializes numpy, matplotlib and friends for interactive use. |
|
267 | Loads and initializes numpy, matplotlib and friends for interactive use. | |
258 |
|
268 | |||
259 | Parameters |
|
269 | Parameters | |
260 | ---------- |
|
270 | ---------- | |
261 | user_ns : dict |
|
271 | user_ns : dict | |
262 | Namespace where the imports will occur. |
|
272 | Namespace where the imports will occur. | |
263 |
|
273 | |||
264 | gui : optional, string |
|
274 | gui : optional, string | |
265 | A valid gui name following the conventions of the %gui magic. |
|
275 | A valid gui name following the conventions of the %gui magic. | |
266 |
|
276 | |||
267 | import_all : optional, boolean |
|
277 | import_all : optional, boolean | |
268 | If true, an 'import *' is done from numpy and pylab. |
|
278 | If true, an 'import *' is done from numpy and pylab. | |
269 |
|
279 | |||
270 | Returns |
|
280 | Returns | |
271 | ------- |
|
281 | ------- | |
272 | The actual gui used (if not given as input, it was obtained from matplotlib |
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282 | The actual gui used (if not given as input, it was obtained from matplotlib | |
273 | itself, and will be needed next to configure IPython's gui integration. |
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283 | itself, and will be needed next to configure IPython's gui integration. | |
274 | """ |
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284 | """ | |
275 | gui, backend = find_gui_and_backend(gui) |
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285 | gui, backend = find_gui_and_backend(gui) | |
276 | activate_matplotlib(backend) |
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286 | activate_matplotlib(backend) | |
277 | import_pylab(user_ns, backend) |
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287 | import_pylab(user_ns, backend) | |
278 |
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288 | |||
279 | print """ |
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289 | print """ | |
280 | Welcome to pylab, a matplotlib-based Python environment [backend: %s]. |
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290 | Welcome to pylab, a matplotlib-based Python environment [backend: %s]. | |
281 | For more information, type 'help(pylab)'.""" % backend |
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291 | For more information, type 'help(pylab)'.""" % backend | |
282 |
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292 | |||
283 | return gui |
|
293 | return gui | |
284 |
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294 |
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