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@@ -1,310 +1,311 b'' | |||||
1 | """A Task logger that presents our DB interface, |
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1 | """A Task logger that presents our DB interface, | |
2 | but exists entirely in memory and implemented with dicts. |
|
2 | but exists entirely in memory and implemented with dicts. | |
3 |
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3 | |||
4 | Authors: |
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4 | Authors: | |
5 |
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5 | |||
6 | * Min RK |
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6 | * Min RK | |
7 |
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7 | |||
8 |
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8 | |||
9 | TaskRecords are dicts of the form: |
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9 | TaskRecords are dicts of the form: | |
10 | { |
|
10 | { | |
11 | 'msg_id' : str(uuid), |
|
11 | 'msg_id' : str(uuid), | |
12 | 'client_uuid' : str(uuid), |
|
12 | 'client_uuid' : str(uuid), | |
13 | 'engine_uuid' : str(uuid) or None, |
|
13 | 'engine_uuid' : str(uuid) or None, | |
14 | 'header' : dict(header), |
|
14 | 'header' : dict(header), | |
15 | 'content': dict(content), |
|
15 | 'content': dict(content), | |
16 | 'buffers': list(buffers), |
|
16 | 'buffers': list(buffers), | |
17 | 'submitted': datetime, |
|
17 | 'submitted': datetime, | |
18 | 'started': datetime or None, |
|
18 | 'started': datetime or None, | |
19 | 'completed': datetime or None, |
|
19 | 'completed': datetime or None, | |
20 | 'resubmitted': datetime or None, |
|
20 | 'resubmitted': datetime or None, | |
21 | 'result_header' : dict(header) or None, |
|
21 | 'result_header' : dict(header) or None, | |
22 | 'result_content' : dict(content) or None, |
|
22 | 'result_content' : dict(content) or None, | |
23 | 'result_buffers' : list(buffers) or None, |
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23 | 'result_buffers' : list(buffers) or None, | |
24 | } |
|
24 | } | |
25 | With this info, many of the special categories of tasks can be defined by query: |
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25 | With this info, many of the special categories of tasks can be defined by query: | |
26 |
|
26 | |||
27 | pending: completed is None |
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27 | pending: completed is None | |
28 | client's outstanding: client_uuid = uuid && completed is None |
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28 | client's outstanding: client_uuid = uuid && completed is None | |
29 | MIA: arrived is None (and completed is None) |
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29 | MIA: arrived is None (and completed is None) | |
30 | etc. |
|
30 | etc. | |
31 |
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31 | |||
32 | EngineRecords are dicts of the form: |
|
32 | EngineRecords are dicts of the form: | |
33 | { |
|
33 | { | |
34 | 'eid' : int(id), |
|
34 | 'eid' : int(id), | |
35 | 'uuid': str(uuid) |
|
35 | 'uuid': str(uuid) | |
36 | } |
|
36 | } | |
37 | This may be extended, but is currently. |
|
37 | This may be extended, but is currently. | |
38 |
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38 | |||
39 | We support a subset of mongodb operators: |
|
39 | We support a subset of mongodb operators: | |
40 | $lt,$gt,$lte,$gte,$ne,$in,$nin,$all,$mod,$exists |
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40 | $lt,$gt,$lte,$gte,$ne,$in,$nin,$all,$mod,$exists | |
41 | """ |
|
41 | """ | |
42 | #----------------------------------------------------------------------------- |
|
42 | #----------------------------------------------------------------------------- | |
43 | # Copyright (C) 2010-2011 The IPython Development Team |
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43 | # Copyright (C) 2010-2011 The IPython Development Team | |
44 | # |
|
44 | # | |
45 | # Distributed under the terms of the BSD License. The full license is in |
|
45 | # Distributed under the terms of the BSD License. The full license is in | |
46 | # the file COPYING, distributed as part of this software. |
|
46 | # the file COPYING, distributed as part of this software. | |
47 | #----------------------------------------------------------------------------- |
|
47 | #----------------------------------------------------------------------------- | |
48 |
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48 | |||
49 | from copy import deepcopy as copy |
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49 | from copy import deepcopy as copy | |
50 | from datetime import datetime |
|
50 | from datetime import datetime | |
51 |
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51 | |||
52 | from IPython.config.configurable import LoggingConfigurable |
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52 | from IPython.config.configurable import LoggingConfigurable | |
53 |
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53 | |||
54 | from IPython.utils.traitlets import Dict, Unicode, Integer, Float |
|
54 | from IPython.utils.traitlets import Dict, Unicode, Integer, Float | |
55 |
|
55 | |||
56 | filters = { |
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56 | filters = { | |
57 | '$lt' : lambda a,b: a < b, |
|
57 | '$lt' : lambda a,b: a < b, | |
58 | '$gt' : lambda a,b: b > a, |
|
58 | '$gt' : lambda a,b: b > a, | |
59 | '$eq' : lambda a,b: a == b, |
|
59 | '$eq' : lambda a,b: a == b, | |
60 | '$ne' : lambda a,b: a != b, |
|
60 | '$ne' : lambda a,b: a != b, | |
61 | '$lte': lambda a,b: a <= b, |
|
61 | '$lte': lambda a,b: a <= b, | |
62 | '$gte': lambda a,b: a >= b, |
|
62 | '$gte': lambda a,b: a >= b, | |
63 | '$in' : lambda a,b: a in b, |
|
63 | '$in' : lambda a,b: a in b, | |
64 | '$nin': lambda a,b: a not in b, |
|
64 | '$nin': lambda a,b: a not in b, | |
65 | '$all': lambda a,b: all([ a in bb for bb in b ]), |
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65 | '$all': lambda a,b: all([ a in bb for bb in b ]), | |
66 | '$mod': lambda a,b: a%b[0] == b[1], |
|
66 | '$mod': lambda a,b: a%b[0] == b[1], | |
67 | '$exists' : lambda a,b: (b and a is not None) or (a is None and not b) |
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67 | '$exists' : lambda a,b: (b and a is not None) or (a is None and not b) | |
68 | } |
|
68 | } | |
69 |
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69 | |||
70 |
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70 | |||
71 | class CompositeFilter(object): |
|
71 | class CompositeFilter(object): | |
72 | """Composite filter for matching multiple properties.""" |
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72 | """Composite filter for matching multiple properties.""" | |
73 |
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73 | |||
74 | def __init__(self, dikt): |
|
74 | def __init__(self, dikt): | |
75 | self.tests = [] |
|
75 | self.tests = [] | |
76 | self.values = [] |
|
76 | self.values = [] | |
77 | for key, value in dikt.iteritems(): |
|
77 | for key, value in dikt.iteritems(): | |
78 | self.tests.append(filters[key]) |
|
78 | self.tests.append(filters[key]) | |
79 | self.values.append(value) |
|
79 | self.values.append(value) | |
80 |
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80 | |||
81 | def __call__(self, value): |
|
81 | def __call__(self, value): | |
82 | for test,check in zip(self.tests, self.values): |
|
82 | for test,check in zip(self.tests, self.values): | |
83 | if not test(value, check): |
|
83 | if not test(value, check): | |
84 | return False |
|
84 | return False | |
85 | return True |
|
85 | return True | |
86 |
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86 | |||
87 | class BaseDB(LoggingConfigurable): |
|
87 | class BaseDB(LoggingConfigurable): | |
88 | """Empty Parent class so traitlets work on DB.""" |
|
88 | """Empty Parent class so traitlets work on DB.""" | |
89 | # base configurable traits: |
|
89 | # base configurable traits: | |
90 | session = Unicode("") |
|
90 | session = Unicode("") | |
91 |
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91 | |||
92 | class DictDB(BaseDB): |
|
92 | class DictDB(BaseDB): | |
93 | """Basic in-memory dict-based object for saving Task Records. |
|
93 | """Basic in-memory dict-based object for saving Task Records. | |
94 |
|
94 | |||
95 | This is the first object to present the DB interface |
|
95 | This is the first object to present the DB interface | |
96 | for logging tasks out of memory. |
|
96 | for logging tasks out of memory. | |
97 |
|
97 | |||
98 | The interface is based on MongoDB, so adding a MongoDB |
|
98 | The interface is based on MongoDB, so adding a MongoDB | |
99 | backend should be straightforward. |
|
99 | backend should be straightforward. | |
100 | """ |
|
100 | """ | |
101 |
|
101 | |||
102 | _records = Dict() |
|
102 | _records = Dict() | |
103 | _culled_ids = set() # set of ids which have been culled |
|
103 | _culled_ids = set() # set of ids which have been culled | |
104 | _buffer_bytes = Integer(0) # running total of the bytes in the DB |
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104 | _buffer_bytes = Integer(0) # running total of the bytes in the DB | |
105 |
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105 | |||
106 |
size_limit = Integer(1024* |
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106 | size_limit = Integer(1024**3, config=True, | |
107 | help="""The maximum total size (in bytes) of the buffers stored in the db |
|
107 | help="""The maximum total size (in bytes) of the buffers stored in the db | |
108 |
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108 | |||
109 | When the db exceeds this size, the oldest records will be culled until |
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109 | When the db exceeds this size, the oldest records will be culled until | |
110 | the total size is under size_limit * (1-cull_fraction). |
|
110 | the total size is under size_limit * (1-cull_fraction). | |
|
111 | default: 1 GB | |||
111 | """ |
|
112 | """ | |
112 | ) |
|
113 | ) | |
113 | record_limit = Integer(1024, config=True, |
|
114 | record_limit = Integer(1024, config=True, | |
114 | help="""The maximum number of records in the db |
|
115 | help="""The maximum number of records in the db | |
115 |
|
116 | |||
116 | When the history exceeds this size, the first record_limit * cull_fraction |
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117 | When the history exceeds this size, the first record_limit * cull_fraction | |
117 | records will be culled. |
|
118 | records will be culled. | |
118 | """ |
|
119 | """ | |
119 | ) |
|
120 | ) | |
120 | cull_fraction = Float(0.1, config=True, |
|
121 | cull_fraction = Float(0.1, config=True, | |
121 | help="""The fraction by which the db should culled when one of the limits is exceeded |
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122 | help="""The fraction by which the db should culled when one of the limits is exceeded | |
122 |
|
123 | |||
123 | In general, the db size will spend most of its time with a size in the range: |
|
124 | In general, the db size will spend most of its time with a size in the range: | |
124 |
|
125 | |||
125 | [limit * (1-cull_fraction), limit] |
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126 | [limit * (1-cull_fraction), limit] | |
126 |
|
127 | |||
127 | for each of size_limit and record_limit. |
|
128 | for each of size_limit and record_limit. | |
128 | """ |
|
129 | """ | |
129 | ) |
|
130 | ) | |
130 |
|
131 | |||
131 | def _match_one(self, rec, tests): |
|
132 | def _match_one(self, rec, tests): | |
132 | """Check if a specific record matches tests.""" |
|
133 | """Check if a specific record matches tests.""" | |
133 | for key,test in tests.iteritems(): |
|
134 | for key,test in tests.iteritems(): | |
134 | if not test(rec.get(key, None)): |
|
135 | if not test(rec.get(key, None)): | |
135 | return False |
|
136 | return False | |
136 | return True |
|
137 | return True | |
137 |
|
138 | |||
138 | def _match(self, check): |
|
139 | def _match(self, check): | |
139 | """Find all the matches for a check dict.""" |
|
140 | """Find all the matches for a check dict.""" | |
140 | matches = [] |
|
141 | matches = [] | |
141 | tests = {} |
|
142 | tests = {} | |
142 | for k,v in check.iteritems(): |
|
143 | for k,v in check.iteritems(): | |
143 | if isinstance(v, dict): |
|
144 | if isinstance(v, dict): | |
144 | tests[k] = CompositeFilter(v) |
|
145 | tests[k] = CompositeFilter(v) | |
145 | else: |
|
146 | else: | |
146 | tests[k] = lambda o: o==v |
|
147 | tests[k] = lambda o: o==v | |
147 |
|
148 | |||
148 | for rec in self._records.itervalues(): |
|
149 | for rec in self._records.itervalues(): | |
149 | if self._match_one(rec, tests): |
|
150 | if self._match_one(rec, tests): | |
150 | matches.append(copy(rec)) |
|
151 | matches.append(copy(rec)) | |
151 | return matches |
|
152 | return matches | |
152 |
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153 | |||
153 | def _extract_subdict(self, rec, keys): |
|
154 | def _extract_subdict(self, rec, keys): | |
154 | """extract subdict of keys""" |
|
155 | """extract subdict of keys""" | |
155 | d = {} |
|
156 | d = {} | |
156 | d['msg_id'] = rec['msg_id'] |
|
157 | d['msg_id'] = rec['msg_id'] | |
157 | for key in keys: |
|
158 | for key in keys: | |
158 | d[key] = rec[key] |
|
159 | d[key] = rec[key] | |
159 | return copy(d) |
|
160 | return copy(d) | |
160 |
|
161 | |||
161 | # methods for monitoring size / culling history |
|
162 | # methods for monitoring size / culling history | |
162 |
|
163 | |||
163 | def _add_bytes(self, rec): |
|
164 | def _add_bytes(self, rec): | |
164 | for key in ('buffers', 'result_buffers'): |
|
165 | for key in ('buffers', 'result_buffers'): | |
165 | for buf in rec.get(key) or []: |
|
166 | for buf in rec.get(key) or []: | |
166 | self._buffer_bytes += len(buf) |
|
167 | self._buffer_bytes += len(buf) | |
167 |
|
168 | |||
168 | self._maybe_cull() |
|
169 | self._maybe_cull() | |
169 |
|
170 | |||
170 | def _drop_bytes(self, rec): |
|
171 | def _drop_bytes(self, rec): | |
171 | for key in ('buffers', 'result_buffers'): |
|
172 | for key in ('buffers', 'result_buffers'): | |
172 | for buf in rec.get(key) or []: |
|
173 | for buf in rec.get(key) or []: | |
173 | self._buffer_bytes -= len(buf) |
|
174 | self._buffer_bytes -= len(buf) | |
174 |
|
175 | |||
175 | def _cull_oldest(self, n=1): |
|
176 | def _cull_oldest(self, n=1): | |
176 | """cull the oldest N records""" |
|
177 | """cull the oldest N records""" | |
177 | for msg_id in self.get_history()[:n]: |
|
178 | for msg_id in self.get_history()[:n]: | |
178 | self.log.debug("Culling record: %r", msg_id) |
|
179 | self.log.debug("Culling record: %r", msg_id) | |
179 | self._culled_ids.add(msg_id) |
|
180 | self._culled_ids.add(msg_id) | |
180 | self.drop_record(msg_id) |
|
181 | self.drop_record(msg_id) | |
181 |
|
182 | |||
182 | def _maybe_cull(self): |
|
183 | def _maybe_cull(self): | |
183 | # cull by count: |
|
184 | # cull by count: | |
184 | if len(self._records) > self.record_limit: |
|
185 | if len(self._records) > self.record_limit: | |
185 | to_cull = int(self.cull_fraction * self.record_limit) |
|
186 | to_cull = int(self.cull_fraction * self.record_limit) | |
186 | self.log.info("%i records exceeds limit of %i, culling oldest %i", |
|
187 | self.log.info("%i records exceeds limit of %i, culling oldest %i", | |
187 | len(self._records), self.record_limit, to_cull |
|
188 | len(self._records), self.record_limit, to_cull | |
188 | ) |
|
189 | ) | |
189 | self._cull_oldest(to_cull) |
|
190 | self._cull_oldest(to_cull) | |
190 |
|
191 | |||
191 | # cull by size: |
|
192 | # cull by size: | |
192 | if self._buffer_bytes > self.size_limit: |
|
193 | if self._buffer_bytes > self.size_limit: | |
193 | limit = self.size_limit * (1 - self.cull_fraction) |
|
194 | limit = self.size_limit * (1 - self.cull_fraction) | |
194 |
|
195 | |||
195 | before = self._buffer_bytes |
|
196 | before = self._buffer_bytes | |
196 | before_count = len(self._records) |
|
197 | before_count = len(self._records) | |
197 | culled = 0 |
|
198 | culled = 0 | |
198 | while self._buffer_bytes > limit: |
|
199 | while self._buffer_bytes > limit: | |
199 | self._cull_oldest(1) |
|
200 | self._cull_oldest(1) | |
200 | culled += 1 |
|
201 | culled += 1 | |
201 |
|
202 | |||
202 | self.log.info("%i records with total buffer size %i exceeds limit: %i. Culled oldest %i records.", |
|
203 | self.log.info("%i records with total buffer size %i exceeds limit: %i. Culled oldest %i records.", | |
203 | before_count, before, self.size_limit, culled |
|
204 | before_count, before, self.size_limit, culled | |
204 | ) |
|
205 | ) | |
205 |
|
206 | |||
206 | # public API methods: |
|
207 | # public API methods: | |
207 |
|
208 | |||
208 | def add_record(self, msg_id, rec): |
|
209 | def add_record(self, msg_id, rec): | |
209 | """Add a new Task Record, by msg_id.""" |
|
210 | """Add a new Task Record, by msg_id.""" | |
210 | if msg_id in self._records: |
|
211 | if msg_id in self._records: | |
211 | raise KeyError("Already have msg_id %r"%(msg_id)) |
|
212 | raise KeyError("Already have msg_id %r"%(msg_id)) | |
212 | self._records[msg_id] = rec |
|
213 | self._records[msg_id] = rec | |
213 | self._add_bytes(rec) |
|
214 | self._add_bytes(rec) | |
214 | self._maybe_cull() |
|
215 | self._maybe_cull() | |
215 |
|
216 | |||
216 | def get_record(self, msg_id): |
|
217 | def get_record(self, msg_id): | |
217 | """Get a specific Task Record, by msg_id.""" |
|
218 | """Get a specific Task Record, by msg_id.""" | |
218 | if msg_id in self._culled_ids: |
|
219 | if msg_id in self._culled_ids: | |
219 | raise KeyError("Record %r has been culled for size" % msg_id) |
|
220 | raise KeyError("Record %r has been culled for size" % msg_id) | |
220 | if not msg_id in self._records: |
|
221 | if not msg_id in self._records: | |
221 | raise KeyError("No such msg_id %r"%(msg_id)) |
|
222 | raise KeyError("No such msg_id %r"%(msg_id)) | |
222 | return copy(self._records[msg_id]) |
|
223 | return copy(self._records[msg_id]) | |
223 |
|
224 | |||
224 | def update_record(self, msg_id, rec): |
|
225 | def update_record(self, msg_id, rec): | |
225 | """Update the data in an existing record.""" |
|
226 | """Update the data in an existing record.""" | |
226 | if msg_id in self._culled_ids: |
|
227 | if msg_id in self._culled_ids: | |
227 | raise KeyError("Record %r has been culled for size" % msg_id) |
|
228 | raise KeyError("Record %r has been culled for size" % msg_id) | |
228 | _rec = self._records[msg_id] |
|
229 | _rec = self._records[msg_id] | |
229 | self._drop_bytes(_rec) |
|
230 | self._drop_bytes(_rec) | |
230 | _rec.update(rec) |
|
231 | _rec.update(rec) | |
231 | self._add_bytes(_rec) |
|
232 | self._add_bytes(_rec) | |
232 |
|
233 | |||
233 | def drop_matching_records(self, check): |
|
234 | def drop_matching_records(self, check): | |
234 | """Remove a record from the DB.""" |
|
235 | """Remove a record from the DB.""" | |
235 | matches = self._match(check) |
|
236 | matches = self._match(check) | |
236 | for rec in matches: |
|
237 | for rec in matches: | |
237 | self._drop_bytes(rec) |
|
238 | self._drop_bytes(rec) | |
238 | del self._records[rec['msg_id']] |
|
239 | del self._records[rec['msg_id']] | |
239 |
|
240 | |||
240 | def drop_record(self, msg_id): |
|
241 | def drop_record(self, msg_id): | |
241 | """Remove a record from the DB.""" |
|
242 | """Remove a record from the DB.""" | |
242 | rec = self._records[msg_id] |
|
243 | rec = self._records[msg_id] | |
243 | self._drop_bytes(rec) |
|
244 | self._drop_bytes(rec) | |
244 | del self._records[msg_id] |
|
245 | del self._records[msg_id] | |
245 |
|
246 | |||
246 | def find_records(self, check, keys=None): |
|
247 | def find_records(self, check, keys=None): | |
247 | """Find records matching a query dict, optionally extracting subset of keys. |
|
248 | """Find records matching a query dict, optionally extracting subset of keys. | |
248 |
|
249 | |||
249 | Returns dict keyed by msg_id of matching records. |
|
250 | Returns dict keyed by msg_id of matching records. | |
250 |
|
251 | |||
251 | Parameters |
|
252 | Parameters | |
252 | ---------- |
|
253 | ---------- | |
253 |
|
254 | |||
254 | check: dict |
|
255 | check: dict | |
255 | mongodb-style query argument |
|
256 | mongodb-style query argument | |
256 | keys: list of strs [optional] |
|
257 | keys: list of strs [optional] | |
257 | if specified, the subset of keys to extract. msg_id will *always* be |
|
258 | if specified, the subset of keys to extract. msg_id will *always* be | |
258 | included. |
|
259 | included. | |
259 | """ |
|
260 | """ | |
260 | matches = self._match(check) |
|
261 | matches = self._match(check) | |
261 | if keys: |
|
262 | if keys: | |
262 | return [ self._extract_subdict(rec, keys) for rec in matches ] |
|
263 | return [ self._extract_subdict(rec, keys) for rec in matches ] | |
263 | else: |
|
264 | else: | |
264 | return matches |
|
265 | return matches | |
265 |
|
266 | |||
266 | def get_history(self): |
|
267 | def get_history(self): | |
267 | """get all msg_ids, ordered by time submitted.""" |
|
268 | """get all msg_ids, ordered by time submitted.""" | |
268 | msg_ids = self._records.keys() |
|
269 | msg_ids = self._records.keys() | |
269 | # Remove any that do not have a submitted timestamp. |
|
270 | # Remove any that do not have a submitted timestamp. | |
270 | # This is extremely unlikely to happen, |
|
271 | # This is extremely unlikely to happen, | |
271 | # but it seems to come up in some tests on VMs. |
|
272 | # but it seems to come up in some tests on VMs. | |
272 | msg_ids = [ m for m in msg_ids if self._records[m]['submitted'] is not None ] |
|
273 | msg_ids = [ m for m in msg_ids if self._records[m]['submitted'] is not None ] | |
273 | return sorted(msg_ids, key=lambda m: self._records[m]['submitted']) |
|
274 | return sorted(msg_ids, key=lambda m: self._records[m]['submitted']) | |
274 |
|
275 | |||
275 |
|
276 | |||
276 | NODATA = KeyError("NoDB backend doesn't store any data. " |
|
277 | NODATA = KeyError("NoDB backend doesn't store any data. " | |
277 | "Start the Controller with a DB backend to enable resubmission / result persistence." |
|
278 | "Start the Controller with a DB backend to enable resubmission / result persistence." | |
278 | ) |
|
279 | ) | |
279 |
|
280 | |||
280 |
|
281 | |||
281 | class NoDB(BaseDB): |
|
282 | class NoDB(BaseDB): | |
282 | """A blackhole db backend that actually stores no information. |
|
283 | """A blackhole db backend that actually stores no information. | |
283 |
|
284 | |||
284 | Provides the full DB interface, but raises KeyErrors on any |
|
285 | Provides the full DB interface, but raises KeyErrors on any | |
285 | method that tries to access the records. This can be used to |
|
286 | method that tries to access the records. This can be used to | |
286 | minimize the memory footprint of the Hub when its record-keeping |
|
287 | minimize the memory footprint of the Hub when its record-keeping | |
287 | functionality is not required. |
|
288 | functionality is not required. | |
288 | """ |
|
289 | """ | |
289 |
|
290 | |||
290 | def add_record(self, msg_id, record): |
|
291 | def add_record(self, msg_id, record): | |
291 | pass |
|
292 | pass | |
292 |
|
293 | |||
293 | def get_record(self, msg_id): |
|
294 | def get_record(self, msg_id): | |
294 | raise NODATA |
|
295 | raise NODATA | |
295 |
|
296 | |||
296 | def update_record(self, msg_id, record): |
|
297 | def update_record(self, msg_id, record): | |
297 | pass |
|
298 | pass | |
298 |
|
299 | |||
299 | def drop_matching_records(self, check): |
|
300 | def drop_matching_records(self, check): | |
300 | pass |
|
301 | pass | |
301 |
|
302 | |||
302 | def drop_record(self, msg_id): |
|
303 | def drop_record(self, msg_id): | |
303 | pass |
|
304 | pass | |
304 |
|
305 | |||
305 | def find_records(self, check, keys=None): |
|
306 | def find_records(self, check, keys=None): | |
306 | raise NODATA |
|
307 | raise NODATA | |
307 |
|
308 | |||
308 | def get_history(self): |
|
309 | def get_history(self): | |
309 | raise NODATA |
|
310 | raise NODATA | |
310 |
|
311 |
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