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@@ -1,345 +1,42 b'' | |||
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1 | 1 | # -*- coding: utf-8 -*- |
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2 | 2 | """ |
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3 | ===================== | |
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4 | Cython related magics | |
|
5 | ===================== | |
|
3 | The cython magic has been integrated into Cython itself, | |
|
4 | which is now released in version 0.21. | |
|
6 | 5 | |
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7 | Magic command interface for interactive work with Cython | |
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8 | ||
|
9 | .. note:: | |
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10 | ||
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11 | The ``Cython`` package needs to be installed separately. It | |
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12 | can be obtained using ``easy_install`` or ``pip``. | |
|
13 | ||
|
14 | Usage | |
|
15 | ===== | |
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16 | ||
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17 | To enable the magics below, execute ``%load_ext cythonmagic``. | |
|
18 | ||
|
19 | ``%%cython`` | |
|
20 | ||
|
21 | {CYTHON_DOC} | |
|
22 | ||
|
23 | ``%%cython_inline`` | |
|
24 | ||
|
25 | {CYTHON_INLINE_DOC} | |
|
26 | ||
|
27 | ``%%cython_pyximport`` | |
|
28 | ||
|
29 | {CYTHON_PYXIMPORT_DOC} | |
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30 | ||
|
31 | Author: | |
|
32 | * Brian Granger | |
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33 | ||
|
34 | Parts of this code were taken from Cython.inline. | |
|
6 | cf github `cython` organisation, `cython` repo, under the | |
|
7 | file `Cython/Build/IpythonMagic.py` | |
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35 | 8 | """ |
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36 | 9 | #----------------------------------------------------------------------------- |
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37 | 10 | # Copyright (C) 2010-2011, IPython Development Team. |
|
38 | 11 | # |
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39 | 12 | # Distributed under the terms of the Modified BSD License. |
|
40 | 13 | # |
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41 | 14 | # The full license is in the file COPYING.txt, distributed with this software. |
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42 | 15 | #----------------------------------------------------------------------------- |
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43 | 16 | |
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44 | 17 | from __future__ import print_function |
|
45 | 18 | |
|
46 | import imp | |
|
47 | import io | |
|
48 | import os | |
|
49 | import re | |
|
50 | import sys | |
|
51 | import time | |
|
52 | ||
|
53 | 19 | try: |
|
54 | reload | |
|
55 | except NameError: # Python 3 | |
|
56 | from imp import reload | |
|
20 | import Cython | |
|
21 | except: | |
|
22 | Cython = None | |
|
57 | 23 | |
|
58 | 24 | try: |
|
59 | import hashlib | |
|
60 | except ImportError: | |
|
61 | import md5 as hashlib | |
|
62 | ||
|
63 | from distutils.core import Distribution, Extension | |
|
64 | from distutils.command.build_ext import build_ext | |
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65 | ||
|
66 | from IPython.core import display | |
|
67 | from IPython.core import magic_arguments | |
|
68 | from IPython.core.magic import Magics, magics_class, cell_magic | |
|
69 | from IPython.utils import py3compat | |
|
70 | from IPython.utils.path import get_ipython_cache_dir | |
|
71 | from IPython.utils.text import dedent | |
|
72 | ||
|
73 | import Cython | |
|
74 | from Cython.Compiler.Errors import CompileError | |
|
75 | from Cython.Build.Dependencies import cythonize | |
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76 | ||
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77 | ||
|
78 | @magics_class | |
|
79 | class CythonMagics(Magics): | |
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80 | ||
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81 | def __init__(self, shell): | |
|
82 | super(CythonMagics,self).__init__(shell) | |
|
83 | self._reloads = {} | |
|
84 | self._code_cache = {} | |
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85 | ||
|
86 | def _import_all(self, module): | |
|
87 | for k,v in module.__dict__.items(): | |
|
88 | if not k.startswith('__'): | |
|
89 | self.shell.push({k:v}) | |
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90 | ||
|
91 | @cell_magic | |
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92 | def cython_inline(self, line, cell): | |
|
93 | """Compile and run a Cython code cell using Cython.inline. | |
|
94 | ||
|
95 | This magic simply passes the body of the cell to Cython.inline | |
|
96 | and returns the result. If the variables `a` and `b` are defined | |
|
97 | in the user's namespace, here is a simple example that returns | |
|
98 | their sum:: | |
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99 | ||
|
100 | %%cython_inline | |
|
101 | return a+b | |
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102 | ||
|
103 | For most purposes, we recommend the usage of the `%%cython` magic. | |
|
104 | """ | |
|
105 | locs = self.shell.user_global_ns | |
|
106 | globs = self.shell.user_ns | |
|
107 | return Cython.inline(cell, locals=locs, globals=globs) | |
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108 | ||
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109 | @cell_magic | |
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110 | def cython_pyximport(self, line, cell): | |
|
111 | """Compile and import a Cython code cell using pyximport. | |
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25 | from Cython.Build.IpythonMagic import CythonMagics | |
|
26 | except : | |
|
27 | pass | |
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112 | 28 | |
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113 | The contents of the cell are written to a `.pyx` file in the current | |
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114 | working directory, which is then imported using `pyximport`. This | |
|
115 | magic requires a module name to be passed:: | |
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116 | ||
|
117 | %%cython_pyximport modulename | |
|
118 | def f(x): | |
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119 | return 2.0*x | |
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120 | ||
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121 | The compiled module is then imported and all of its symbols are | |
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122 | injected into the user's namespace. For most purposes, we recommend | |
|
123 | the usage of the `%%cython` magic. | |
|
124 | """ | |
|
125 | module_name = line.strip() | |
|
126 | if not module_name: | |
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127 | raise ValueError('module name must be given') | |
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128 | fname = module_name + '.pyx' | |
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129 | with io.open(fname, 'w', encoding='utf-8') as f: | |
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130 | f.write(cell) | |
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131 | if 'pyximport' not in sys.modules: | |
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132 | import pyximport | |
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133 | pyximport.install(reload_support=True) | |
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134 | if module_name in self._reloads: | |
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135 | module = self._reloads[module_name] | |
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136 | reload(module) | |
|
137 | else: | |
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138 | __import__(module_name) | |
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139 | module = sys.modules[module_name] | |
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140 | self._reloads[module_name] = module | |
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141 | self._import_all(module) | |
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142 | ||
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143 | @magic_arguments.magic_arguments() | |
|
144 | @magic_arguments.argument( | |
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145 | '-c', '--compile-args', action='append', default=[], | |
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146 | help="Extra flags to pass to compiler via the `extra_compile_args` " | |
|
147 | "Extension flag (can be specified multiple times)." | |
|
148 | ) | |
|
149 | @magic_arguments.argument( | |
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150 | '--link-args', action='append', default=[], | |
|
151 | help="Extra flags to pass to linker via the `extra_link_args` " | |
|
152 | "Extension flag (can be specified multiple times)." | |
|
153 | ) | |
|
154 | @magic_arguments.argument( | |
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155 | '-l', '--lib', action='append', default=[], | |
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156 | help="Add a library to link the extension against (can be specified " | |
|
157 | "multiple times)." | |
|
158 | ) | |
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159 | @magic_arguments.argument( | |
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160 | '-n', '--name', | |
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161 | help="Specify a name for the Cython module." | |
|
162 | ) | |
|
163 | @magic_arguments.argument( | |
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164 | '-L', dest='library_dirs', metavar='dir', action='append', default=[], | |
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165 | help="Add a path to the list of libary directories (can be specified " | |
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166 | "multiple times)." | |
|
167 | ) | |
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168 | @magic_arguments.argument( | |
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169 | '-I', '--include', action='append', default=[], | |
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170 | help="Add a path to the list of include directories (can be specified " | |
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171 | "multiple times)." | |
|
172 | ) | |
|
173 | @magic_arguments.argument( | |
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174 | '-+', '--cplus', action='store_true', default=False, | |
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175 | help="Output a C++ rather than C file." | |
|
176 | ) | |
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177 | @magic_arguments.argument( | |
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178 | '-f', '--force', action='store_true', default=False, | |
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179 | help="Force the compilation of a new module, even if the source has been " | |
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180 | "previously compiled." | |
|
181 | ) | |
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182 | @magic_arguments.argument( | |
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183 | '-a', '--annotate', action='store_true', default=False, | |
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184 | help="Produce a colorized HTML version of the source." | |
|
185 | ) | |
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186 | @cell_magic | |
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187 | def cython(self, line, cell): | |
|
188 | """Compile and import everything from a Cython code cell. | |
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189 | ||
|
190 | The contents of the cell are written to a `.pyx` file in the | |
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191 | directory `IPYTHONDIR/cython` using a filename with the hash of the | |
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192 | code. This file is then cythonized and compiled. The resulting module | |
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193 | is imported and all of its symbols are injected into the user's | |
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194 | namespace. The usage is similar to that of `%%cython_pyximport` but | |
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195 | you don't have to pass a module name:: | |
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196 | ||
|
197 | %%cython | |
|
198 | def f(x): | |
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199 | return 2.0*x | |
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200 | ||
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201 | To compile OpenMP codes, pass the required `--compile-args` | |
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202 | and `--link-args`. For example with gcc:: | |
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203 | ||
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204 | %%cython --compile-args=-fopenmp --link-args=-fopenmp | |
|
205 | ... | |
|
206 | """ | |
|
207 | args = magic_arguments.parse_argstring(self.cython, line) | |
|
208 | code = cell if cell.endswith('\n') else cell+'\n' | |
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209 | lib_dir = os.path.join(get_ipython_cache_dir(), 'cython') | |
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210 | quiet = True | |
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211 | key = code, sys.version_info, sys.executable, Cython.__version__ | |
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212 | ||
|
213 | if not os.path.exists(lib_dir): | |
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214 | os.makedirs(lib_dir) | |
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215 | ||
|
216 | if args.force: | |
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217 | # Force a new module name by adding the current time to the | |
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218 | # key which is hashed to determine the module name. | |
|
219 | key += time.time(), | |
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220 | ||
|
221 | if args.name: | |
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222 | module_name = py3compat.unicode_to_str(args.name) | |
|
223 | else: | |
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224 | module_name = "_cython_magic_" + hashlib.md5(str(key).encode('utf-8')).hexdigest() | |
|
225 | module_path = os.path.join(lib_dir, module_name + self.so_ext) | |
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226 | ||
|
227 | have_module = os.path.isfile(module_path) | |
|
228 | need_cythonize = not have_module | |
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229 | ||
|
230 | if args.annotate: | |
|
231 | html_file = os.path.join(lib_dir, module_name + '.html') | |
|
232 | if not os.path.isfile(html_file): | |
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233 | need_cythonize = True | |
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234 | ||
|
235 | if need_cythonize: | |
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236 | c_include_dirs = args.include | |
|
237 | if 'numpy' in code: | |
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238 | import numpy | |
|
239 | c_include_dirs.append(numpy.get_include()) | |
|
240 | pyx_file = os.path.join(lib_dir, module_name + '.pyx') | |
|
241 | pyx_file = py3compat.cast_bytes_py2(pyx_file, encoding=sys.getfilesystemencoding()) | |
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242 | with io.open(pyx_file, 'w', encoding='utf-8') as f: | |
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243 | f.write(code) | |
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244 | extension = Extension( | |
|
245 | name = module_name, | |
|
246 | sources = [pyx_file], | |
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247 | include_dirs = c_include_dirs, | |
|
248 | library_dirs = args.library_dirs, | |
|
249 | extra_compile_args = args.compile_args, | |
|
250 | extra_link_args = args.link_args, | |
|
251 | libraries = args.lib, | |
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252 | language = 'c++' if args.cplus else 'c', | |
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253 | ) | |
|
254 | build_extension = self._get_build_extension() | |
|
255 | try: | |
|
256 | opts = dict( | |
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257 | quiet=quiet, | |
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258 | annotate = args.annotate, | |
|
259 | force = True, | |
|
260 | ) | |
|
261 | build_extension.extensions = cythonize([extension], **opts) | |
|
262 | except CompileError: | |
|
263 | return | |
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264 | ||
|
265 | if not have_module: | |
|
266 | build_extension.build_temp = os.path.dirname(pyx_file) | |
|
267 | build_extension.build_lib = lib_dir | |
|
268 | build_extension.run() | |
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269 | self._code_cache[key] = module_name | |
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270 | ||
|
271 | module = imp.load_dynamic(module_name, module_path) | |
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272 | self._import_all(module) | |
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273 | ||
|
274 | if args.annotate: | |
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275 | try: | |
|
276 | with io.open(html_file, encoding='utf-8') as f: | |
|
277 | annotated_html = f.read() | |
|
278 | except IOError as e: | |
|
279 | # File could not be opened. Most likely the user has a version | |
|
280 | # of Cython before 0.15.1 (when `cythonize` learned the | |
|
281 | # `force` keyword argument) and has already compiled this | |
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282 | # exact source without annotation. | |
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283 | print('Cython completed successfully but the annotated ' | |
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284 | 'source could not be read.', file=sys.stderr) | |
|
285 | print(e, file=sys.stderr) | |
|
286 | else: | |
|
287 | return display.HTML(self.clean_annotated_html(annotated_html)) | |
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288 | ||
|
289 | @property | |
|
290 | def so_ext(self): | |
|
291 | """The extension suffix for compiled modules.""" | |
|
292 | try: | |
|
293 | return self._so_ext | |
|
294 | except AttributeError: | |
|
295 | self._so_ext = self._get_build_extension().get_ext_filename('') | |
|
296 | return self._so_ext | |
|
297 | ||
|
298 | def _clear_distutils_mkpath_cache(self): | |
|
299 | """clear distutils mkpath cache | |
|
300 | ||
|
301 | prevents distutils from skipping re-creation of dirs that have been removed | |
|
302 | """ | |
|
303 | try: | |
|
304 | from distutils.dir_util import _path_created | |
|
305 | except ImportError: | |
|
306 | pass | |
|
307 | else: | |
|
308 | _path_created.clear() | |
|
309 | ||
|
310 | def _get_build_extension(self): | |
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311 | self._clear_distutils_mkpath_cache() | |
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312 | dist = Distribution() | |
|
313 | config_files = dist.find_config_files() | |
|
314 | try: | |
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315 | config_files.remove('setup.cfg') | |
|
316 | except ValueError: | |
|
317 | pass | |
|
318 | dist.parse_config_files(config_files) | |
|
319 | build_extension = build_ext(dist) | |
|
320 | build_extension.finalize_options() | |
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321 | return build_extension | |
|
322 | ||
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323 | @staticmethod | |
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324 | def clean_annotated_html(html): | |
|
325 | """Clean up the annotated HTML source. | |
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326 | ||
|
327 | Strips the link to the generated C or C++ file, which we do not | |
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328 | present to the user. | |
|
329 | """ | |
|
330 | r = re.compile('<p>Raw output: <a href="(.*)">(.*)</a>') | |
|
331 | html = '\n'.join(l for l in html.splitlines() if not r.match(l)) | |
|
332 | return html | |
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333 | ||
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334 | __doc__ = __doc__.format( | |
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335 | # rST doesn't see the -+ flag as part of an option list, so we | |
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336 | # hide it from the module-level docstring. | |
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337 | CYTHON_DOC = dedent(CythonMagics.cython.__doc__\ | |
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338 | .replace('-+, --cplus','--cplus ')), | |
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339 | CYTHON_INLINE_DOC = dedent(CythonMagics.cython_inline.__doc__), | |
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340 | CYTHON_PYXIMPORT_DOC = dedent(CythonMagics.cython_pyximport.__doc__), | |
|
341 | ) | |
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342 | 29 | |
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30 | ## still load the magic in IPython 3.x, remove completely in future versions. | |
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343 | 31 | def load_ipython_extension(ip): |
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344 | 32 | """Load the extension in IPython.""" |
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345 | ip.register_magics(CythonMagics) | |
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33 | ||
|
34 | print("""The Cython magic has been move to the Cython package, hence """) | |
|
35 | print("""`%load_ext cythonmagic` is deprecated; Please use `%load_ext cython` instead.""") | |
|
36 | ||
|
37 | if Cython is None or tuple(map(int,Cython.__version__.split('.'))) < (0,21) : | |
|
38 | print("You need Cython version >=0.21 to use the Cython magic") | |
|
39 | return | |
|
40 | if CythonMagics: | |
|
41 | print("""\nThough, because I am nice, I'll still try to load it for you this time.""") | |
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42 | ip.register_magics(CythonMagics) |
@@ -1,527 +1,523 b'' | |||
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1 | 1 | # -*- coding: utf-8 -*- |
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2 | 2 | """IPython Test Suite Runner. |
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3 | 3 | |
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4 | 4 | This module provides a main entry point to a user script to test IPython |
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5 | 5 | itself from the command line. There are two ways of running this script: |
|
6 | 6 | |
|
7 | 7 | 1. With the syntax `iptest all`. This runs our entire test suite by |
|
8 | 8 | calling this script (with different arguments) recursively. This |
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9 | 9 | causes modules and package to be tested in different processes, using nose |
|
10 | 10 | or trial where appropriate. |
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11 | 11 | 2. With the regular nose syntax, like `iptest -vvs IPython`. In this form |
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12 | 12 | the script simply calls nose, but with special command line flags and |
|
13 | 13 | plugins loaded. |
|
14 | 14 | |
|
15 | 15 | """ |
|
16 | 16 | |
|
17 | 17 | #----------------------------------------------------------------------------- |
|
18 | 18 | # Copyright (C) 2009-2011 The IPython Development Team |
|
19 | 19 | # |
|
20 | 20 | # Distributed under the terms of the BSD License. The full license is in |
|
21 | 21 | # the file COPYING, distributed as part of this software. |
|
22 | 22 | #----------------------------------------------------------------------------- |
|
23 | 23 | |
|
24 | 24 | #----------------------------------------------------------------------------- |
|
25 | 25 | # Imports |
|
26 | 26 | #----------------------------------------------------------------------------- |
|
27 | 27 | from __future__ import print_function |
|
28 | 28 | |
|
29 | 29 | # Stdlib |
|
30 | 30 | import glob |
|
31 | 31 | from io import BytesIO |
|
32 | 32 | import os |
|
33 | 33 | import os.path as path |
|
34 | 34 | import sys |
|
35 | 35 | from threading import Thread, Lock, Event |
|
36 | 36 | import warnings |
|
37 | 37 | |
|
38 | 38 | # Now, proceed to import nose itself |
|
39 | 39 | import nose.plugins.builtin |
|
40 | 40 | from nose.plugins.xunit import Xunit |
|
41 | 41 | from nose import SkipTest |
|
42 | 42 | from nose.core import TestProgram |
|
43 | 43 | from nose.plugins import Plugin |
|
44 | 44 | from nose.util import safe_str |
|
45 | 45 | |
|
46 | 46 | # Our own imports |
|
47 | 47 | from IPython.utils.process import is_cmd_found |
|
48 | 48 | from IPython.utils.importstring import import_item |
|
49 | 49 | from IPython.testing.plugin.ipdoctest import IPythonDoctest |
|
50 | 50 | from IPython.external.decorators import KnownFailure, knownfailureif |
|
51 | 51 | |
|
52 | 52 | pjoin = path.join |
|
53 | 53 | |
|
54 | 54 | |
|
55 | 55 | #----------------------------------------------------------------------------- |
|
56 | 56 | # Globals |
|
57 | 57 | #----------------------------------------------------------------------------- |
|
58 | 58 | |
|
59 | 59 | |
|
60 | 60 | #----------------------------------------------------------------------------- |
|
61 | 61 | # Warnings control |
|
62 | 62 | #----------------------------------------------------------------------------- |
|
63 | 63 | |
|
64 | 64 | # Twisted generates annoying warnings with Python 2.6, as will do other code |
|
65 | 65 | # that imports 'sets' as of today |
|
66 | 66 | warnings.filterwarnings('ignore', 'the sets module is deprecated', |
|
67 | 67 | DeprecationWarning ) |
|
68 | 68 | |
|
69 | 69 | # This one also comes from Twisted |
|
70 | 70 | warnings.filterwarnings('ignore', 'the sha module is deprecated', |
|
71 | 71 | DeprecationWarning) |
|
72 | 72 | |
|
73 | 73 | # Wx on Fedora11 spits these out |
|
74 | 74 | warnings.filterwarnings('ignore', 'wxPython/wxWidgets release number mismatch', |
|
75 | 75 | UserWarning) |
|
76 | 76 | |
|
77 | 77 | # ------------------------------------------------------------------------------ |
|
78 | 78 | # Monkeypatch Xunit to count known failures as skipped. |
|
79 | 79 | # ------------------------------------------------------------------------------ |
|
80 | 80 | def monkeypatch_xunit(): |
|
81 | 81 | try: |
|
82 | 82 | knownfailureif(True)(lambda: None)() |
|
83 | 83 | except Exception as e: |
|
84 | 84 | KnownFailureTest = type(e) |
|
85 | 85 | |
|
86 | 86 | def addError(self, test, err, capt=None): |
|
87 | 87 | if issubclass(err[0], KnownFailureTest): |
|
88 | 88 | err = (SkipTest,) + err[1:] |
|
89 | 89 | return self.orig_addError(test, err, capt) |
|
90 | 90 | |
|
91 | 91 | Xunit.orig_addError = Xunit.addError |
|
92 | 92 | Xunit.addError = addError |
|
93 | 93 | |
|
94 | 94 | #----------------------------------------------------------------------------- |
|
95 | 95 | # Check which dependencies are installed and greater than minimum version. |
|
96 | 96 | #----------------------------------------------------------------------------- |
|
97 | 97 | def extract_version(mod): |
|
98 | 98 | return mod.__version__ |
|
99 | 99 | |
|
100 | 100 | def test_for(item, min_version=None, callback=extract_version): |
|
101 | 101 | """Test to see if item is importable, and optionally check against a minimum |
|
102 | 102 | version. |
|
103 | 103 | |
|
104 | 104 | If min_version is given, the default behavior is to check against the |
|
105 | 105 | `__version__` attribute of the item, but specifying `callback` allows you to |
|
106 | 106 | extract the value you are interested in. e.g:: |
|
107 | 107 | |
|
108 | 108 | In [1]: import sys |
|
109 | 109 | |
|
110 | 110 | In [2]: from IPython.testing.iptest import test_for |
|
111 | 111 | |
|
112 | 112 | In [3]: test_for('sys', (2,6), callback=lambda sys: sys.version_info) |
|
113 | 113 | Out[3]: True |
|
114 | 114 | |
|
115 | 115 | """ |
|
116 | 116 | try: |
|
117 | 117 | check = import_item(item) |
|
118 | 118 | except (ImportError, RuntimeError): |
|
119 | 119 | # GTK reports Runtime error if it can't be initialized even if it's |
|
120 | 120 | # importable. |
|
121 | 121 | return False |
|
122 | 122 | else: |
|
123 | 123 | if min_version: |
|
124 | 124 | if callback: |
|
125 | 125 | # extra processing step to get version to compare |
|
126 | 126 | check = callback(check) |
|
127 | 127 | |
|
128 | 128 | return check >= min_version |
|
129 | 129 | else: |
|
130 | 130 | return True |
|
131 | 131 | |
|
132 | 132 | # Global dict where we can store information on what we have and what we don't |
|
133 | 133 | # have available at test run time |
|
134 | 134 | have = {} |
|
135 | 135 | |
|
136 | 136 | have['curses'] = test_for('_curses') |
|
137 | 137 | have['matplotlib'] = test_for('matplotlib') |
|
138 | 138 | have['numpy'] = test_for('numpy') |
|
139 | 139 | have['pexpect'] = test_for('IPython.external.pexpect') |
|
140 | 140 | have['pymongo'] = test_for('pymongo') |
|
141 | 141 | have['pygments'] = test_for('pygments') |
|
142 | 142 | have['qt'] = test_for('IPython.external.qt') |
|
143 | 143 | have['sqlite3'] = test_for('sqlite3') |
|
144 | have['cython'] = test_for('Cython') | |
|
145 | 144 | have['tornado'] = test_for('tornado.version_info', (3,1,0), callback=None) |
|
146 | 145 | have['jinja2'] = test_for('jinja2') |
|
147 | 146 | have['mistune'] = test_for('mistune') |
|
148 | 147 | have['requests'] = test_for('requests') |
|
149 | 148 | have['sphinx'] = test_for('sphinx') |
|
150 | 149 | have['jsonschema'] = test_for('jsonschema') |
|
151 | 150 | have['jsonpointer'] = test_for('jsonpointer') |
|
152 | 151 | have['casperjs'] = is_cmd_found('casperjs') |
|
153 | 152 | have['phantomjs'] = is_cmd_found('phantomjs') |
|
154 | 153 | have['slimerjs'] = is_cmd_found('slimerjs') |
|
155 | 154 | |
|
156 | 155 | min_zmq = (2,1,11) |
|
157 | 156 | |
|
158 | 157 | have['zmq'] = test_for('zmq.pyzmq_version_info', min_zmq, callback=lambda x: x()) |
|
159 | 158 | |
|
160 | 159 | #----------------------------------------------------------------------------- |
|
161 | 160 | # Test suite definitions |
|
162 | 161 | #----------------------------------------------------------------------------- |
|
163 | 162 | |
|
164 | 163 | test_group_names = ['parallel', 'kernel', 'kernel.inprocess', 'config', 'core', |
|
165 | 164 | 'extensions', 'lib', 'terminal', 'testing', 'utils', |
|
166 | 165 | 'nbformat', 'qt', 'html', 'nbconvert' |
|
167 | 166 | ] |
|
168 | 167 | |
|
169 | 168 | class TestSection(object): |
|
170 | 169 | def __init__(self, name, includes): |
|
171 | 170 | self.name = name |
|
172 | 171 | self.includes = includes |
|
173 | 172 | self.excludes = [] |
|
174 | 173 | self.dependencies = [] |
|
175 | 174 | self.enabled = True |
|
176 | 175 | |
|
177 | 176 | def exclude(self, module): |
|
178 | 177 | if not module.startswith('IPython'): |
|
179 | 178 | module = self.includes[0] + "." + module |
|
180 | 179 | self.excludes.append(module.replace('.', os.sep)) |
|
181 | 180 | |
|
182 | 181 | def requires(self, *packages): |
|
183 | 182 | self.dependencies.extend(packages) |
|
184 | 183 | |
|
185 | 184 | @property |
|
186 | 185 | def will_run(self): |
|
187 | 186 | return self.enabled and all(have[p] for p in self.dependencies) |
|
188 | 187 | |
|
189 | 188 | # Name -> (include, exclude, dependencies_met) |
|
190 | 189 | test_sections = {n:TestSection(n, ['IPython.%s' % n]) for n in test_group_names} |
|
191 | 190 | |
|
192 | 191 | # Exclusions and dependencies |
|
193 | 192 | # --------------------------- |
|
194 | 193 | |
|
195 | 194 | # core: |
|
196 | 195 | sec = test_sections['core'] |
|
197 | 196 | if not have['sqlite3']: |
|
198 | 197 | sec.exclude('tests.test_history') |
|
199 | 198 | sec.exclude('history') |
|
200 | 199 | if not have['matplotlib']: |
|
201 | 200 | sec.exclude('pylabtools'), |
|
202 | 201 | sec.exclude('tests.test_pylabtools') |
|
203 | 202 | |
|
204 | 203 | # lib: |
|
205 | 204 | sec = test_sections['lib'] |
|
206 | 205 | if not have['zmq']: |
|
207 | 206 | sec.exclude('kernel') |
|
208 | 207 | # We do this unconditionally, so that the test suite doesn't import |
|
209 | 208 | # gtk, changing the default encoding and masking some unicode bugs. |
|
210 | 209 | sec.exclude('inputhookgtk') |
|
211 | 210 | # We also do this unconditionally, because wx can interfere with Unix signals. |
|
212 | 211 | # There are currently no tests for it anyway. |
|
213 | 212 | sec.exclude('inputhookwx') |
|
214 | 213 | # Testing inputhook will need a lot of thought, to figure out |
|
215 | 214 | # how to have tests that don't lock up with the gui event |
|
216 | 215 | # loops in the picture |
|
217 | 216 | sec.exclude('inputhook') |
|
218 | 217 | |
|
219 | 218 | # testing: |
|
220 | 219 | sec = test_sections['testing'] |
|
221 | 220 | # These have to be skipped on win32 because they use echo, rm, cd, etc. |
|
222 | 221 | # See ticket https://github.com/ipython/ipython/issues/87 |
|
223 | 222 | if sys.platform == 'win32': |
|
224 | 223 | sec.exclude('plugin.test_exampleip') |
|
225 | 224 | sec.exclude('plugin.dtexample') |
|
226 | 225 | |
|
227 | 226 | # terminal: |
|
228 | 227 | if (not have['pexpect']) or (not have['zmq']): |
|
229 | 228 | test_sections['terminal'].exclude('console') |
|
230 | 229 | |
|
231 | 230 | # parallel |
|
232 | 231 | sec = test_sections['parallel'] |
|
233 | 232 | sec.requires('zmq') |
|
234 | 233 | if not have['pymongo']: |
|
235 | 234 | sec.exclude('controller.mongodb') |
|
236 | 235 | sec.exclude('tests.test_mongodb') |
|
237 | 236 | |
|
238 | 237 | # kernel: |
|
239 | 238 | sec = test_sections['kernel'] |
|
240 | 239 | sec.requires('zmq') |
|
241 | 240 | # The in-process kernel tests are done in a separate section |
|
242 | 241 | sec.exclude('inprocess') |
|
243 | 242 | # importing gtk sets the default encoding, which we want to avoid |
|
244 | 243 | sec.exclude('zmq.gui.gtkembed') |
|
245 | 244 | sec.exclude('zmq.gui.gtk3embed') |
|
246 | 245 | if not have['matplotlib']: |
|
247 | 246 | sec.exclude('zmq.pylab') |
|
248 | 247 | |
|
249 | 248 | # kernel.inprocess: |
|
250 | 249 | test_sections['kernel.inprocess'].requires('zmq') |
|
251 | 250 | |
|
252 | 251 | # extensions: |
|
253 | 252 | sec = test_sections['extensions'] |
|
254 | if not have['cython']: | |
|
255 | sec.exclude('cythonmagic') | |
|
256 | sec.exclude('tests.test_cythonmagic') | |
|
257 | 253 | # This is deprecated in favour of rpy2 |
|
258 | 254 | sec.exclude('rmagic') |
|
259 | 255 | # autoreload does some strange stuff, so move it to its own test section |
|
260 | 256 | sec.exclude('autoreload') |
|
261 | 257 | sec.exclude('tests.test_autoreload') |
|
262 | 258 | test_sections['autoreload'] = TestSection('autoreload', |
|
263 | 259 | ['IPython.extensions.autoreload', 'IPython.extensions.tests.test_autoreload']) |
|
264 | 260 | test_group_names.append('autoreload') |
|
265 | 261 | |
|
266 | 262 | # qt: |
|
267 | 263 | test_sections['qt'].requires('zmq', 'qt', 'pygments') |
|
268 | 264 | |
|
269 | 265 | # html: |
|
270 | 266 | sec = test_sections['html'] |
|
271 | 267 | sec.requires('zmq', 'tornado', 'requests', 'sqlite3', 'jsonschema', 'jsonpointer') |
|
272 | 268 | # The notebook 'static' directory contains JS, css and other |
|
273 | 269 | # files for web serving. Occasionally projects may put a .py |
|
274 | 270 | # file in there (MathJax ships a conf.py), so we might as |
|
275 | 271 | # well play it safe and skip the whole thing. |
|
276 | 272 | sec.exclude('static') |
|
277 | 273 | sec.exclude('fabfile') |
|
278 | 274 | if not have['jinja2']: |
|
279 | 275 | sec.exclude('notebookapp') |
|
280 | 276 | if not have['pygments'] or not have['jinja2']: |
|
281 | 277 | sec.exclude('nbconvert') |
|
282 | 278 | |
|
283 | 279 | # config: |
|
284 | 280 | # Config files aren't really importable stand-alone |
|
285 | 281 | test_sections['config'].exclude('profile') |
|
286 | 282 | |
|
287 | 283 | # nbconvert: |
|
288 | 284 | sec = test_sections['nbconvert'] |
|
289 | 285 | sec.requires('pygments', 'jinja2', 'jsonschema', 'jsonpointer', 'mistune') |
|
290 | 286 | # Exclude nbconvert directories containing config files used to test. |
|
291 | 287 | # Executing the config files with iptest would cause an exception. |
|
292 | 288 | sec.exclude('tests.files') |
|
293 | 289 | sec.exclude('exporters.tests.files') |
|
294 | 290 | if not have['tornado']: |
|
295 | 291 | sec.exclude('nbconvert.post_processors.serve') |
|
296 | 292 | sec.exclude('nbconvert.post_processors.tests.test_serve') |
|
297 | 293 | |
|
298 | 294 | # nbformat: |
|
299 | 295 | test_sections['nbformat'].requires('jsonschema', 'jsonpointer') |
|
300 | 296 | |
|
301 | 297 | #----------------------------------------------------------------------------- |
|
302 | 298 | # Functions and classes |
|
303 | 299 | #----------------------------------------------------------------------------- |
|
304 | 300 | |
|
305 | 301 | def check_exclusions_exist(): |
|
306 | 302 | from IPython.utils.path import get_ipython_package_dir |
|
307 | 303 | from IPython.utils.warn import warn |
|
308 | 304 | parent = os.path.dirname(get_ipython_package_dir()) |
|
309 | 305 | for sec in test_sections: |
|
310 | 306 | for pattern in sec.exclusions: |
|
311 | 307 | fullpath = pjoin(parent, pattern) |
|
312 | 308 | if not os.path.exists(fullpath) and not glob.glob(fullpath + '.*'): |
|
313 | 309 | warn("Excluding nonexistent file: %r" % pattern) |
|
314 | 310 | |
|
315 | 311 | |
|
316 | 312 | class ExclusionPlugin(Plugin): |
|
317 | 313 | """A nose plugin to effect our exclusions of files and directories. |
|
318 | 314 | """ |
|
319 | 315 | name = 'exclusions' |
|
320 | 316 | score = 3000 # Should come before any other plugins |
|
321 | 317 | |
|
322 | 318 | def __init__(self, exclude_patterns=None): |
|
323 | 319 | """ |
|
324 | 320 | Parameters |
|
325 | 321 | ---------- |
|
326 | 322 | |
|
327 | 323 | exclude_patterns : sequence of strings, optional |
|
328 | 324 | Filenames containing these patterns (as raw strings, not as regular |
|
329 | 325 | expressions) are excluded from the tests. |
|
330 | 326 | """ |
|
331 | 327 | self.exclude_patterns = exclude_patterns or [] |
|
332 | 328 | super(ExclusionPlugin, self).__init__() |
|
333 | 329 | |
|
334 | 330 | def options(self, parser, env=os.environ): |
|
335 | 331 | Plugin.options(self, parser, env) |
|
336 | 332 | |
|
337 | 333 | def configure(self, options, config): |
|
338 | 334 | Plugin.configure(self, options, config) |
|
339 | 335 | # Override nose trying to disable plugin. |
|
340 | 336 | self.enabled = True |
|
341 | 337 | |
|
342 | 338 | def wantFile(self, filename): |
|
343 | 339 | """Return whether the given filename should be scanned for tests. |
|
344 | 340 | """ |
|
345 | 341 | if any(pat in filename for pat in self.exclude_patterns): |
|
346 | 342 | return False |
|
347 | 343 | return None |
|
348 | 344 | |
|
349 | 345 | def wantDirectory(self, directory): |
|
350 | 346 | """Return whether the given directory should be scanned for tests. |
|
351 | 347 | """ |
|
352 | 348 | if any(pat in directory for pat in self.exclude_patterns): |
|
353 | 349 | return False |
|
354 | 350 | return None |
|
355 | 351 | |
|
356 | 352 | |
|
357 | 353 | class StreamCapturer(Thread): |
|
358 | 354 | daemon = True # Don't hang if main thread crashes |
|
359 | 355 | started = False |
|
360 | 356 | def __init__(self): |
|
361 | 357 | super(StreamCapturer, self).__init__() |
|
362 | 358 | self.streams = [] |
|
363 | 359 | self.buffer = BytesIO() |
|
364 | 360 | self.readfd, self.writefd = os.pipe() |
|
365 | 361 | self.buffer_lock = Lock() |
|
366 | 362 | self.stop = Event() |
|
367 | 363 | |
|
368 | 364 | def run(self): |
|
369 | 365 | self.started = True |
|
370 | 366 | |
|
371 | 367 | while not self.stop.is_set(): |
|
372 | 368 | chunk = os.read(self.readfd, 1024) |
|
373 | 369 | |
|
374 | 370 | with self.buffer_lock: |
|
375 | 371 | self.buffer.write(chunk) |
|
376 | 372 | |
|
377 | 373 | os.close(self.readfd) |
|
378 | 374 | os.close(self.writefd) |
|
379 | 375 | |
|
380 | 376 | def reset_buffer(self): |
|
381 | 377 | with self.buffer_lock: |
|
382 | 378 | self.buffer.truncate(0) |
|
383 | 379 | self.buffer.seek(0) |
|
384 | 380 | |
|
385 | 381 | def get_buffer(self): |
|
386 | 382 | with self.buffer_lock: |
|
387 | 383 | return self.buffer.getvalue() |
|
388 | 384 | |
|
389 | 385 | def ensure_started(self): |
|
390 | 386 | if not self.started: |
|
391 | 387 | self.start() |
|
392 | 388 | |
|
393 | 389 | def halt(self): |
|
394 | 390 | """Safely stop the thread.""" |
|
395 | 391 | if not self.started: |
|
396 | 392 | return |
|
397 | 393 | |
|
398 | 394 | self.stop.set() |
|
399 | 395 | os.write(self.writefd, b'wake up') # Ensure we're not locked in a read() |
|
400 | 396 | self.join() |
|
401 | 397 | |
|
402 | 398 | class SubprocessStreamCapturePlugin(Plugin): |
|
403 | 399 | name='subprocstreams' |
|
404 | 400 | def __init__(self): |
|
405 | 401 | Plugin.__init__(self) |
|
406 | 402 | self.stream_capturer = StreamCapturer() |
|
407 | 403 | self.destination = os.environ.get('IPTEST_SUBPROC_STREAMS', 'capture') |
|
408 | 404 | # This is ugly, but distant parts of the test machinery need to be able |
|
409 | 405 | # to redirect streams, so we make the object globally accessible. |
|
410 | 406 | nose.iptest_stdstreams_fileno = self.get_write_fileno |
|
411 | 407 | |
|
412 | 408 | def get_write_fileno(self): |
|
413 | 409 | if self.destination == 'capture': |
|
414 | 410 | self.stream_capturer.ensure_started() |
|
415 | 411 | return self.stream_capturer.writefd |
|
416 | 412 | elif self.destination == 'discard': |
|
417 | 413 | return os.open(os.devnull, os.O_WRONLY) |
|
418 | 414 | else: |
|
419 | 415 | return sys.__stdout__.fileno() |
|
420 | 416 | |
|
421 | 417 | def configure(self, options, config): |
|
422 | 418 | Plugin.configure(self, options, config) |
|
423 | 419 | # Override nose trying to disable plugin. |
|
424 | 420 | if self.destination == 'capture': |
|
425 | 421 | self.enabled = True |
|
426 | 422 | |
|
427 | 423 | def startTest(self, test): |
|
428 | 424 | # Reset log capture |
|
429 | 425 | self.stream_capturer.reset_buffer() |
|
430 | 426 | |
|
431 | 427 | def formatFailure(self, test, err): |
|
432 | 428 | # Show output |
|
433 | 429 | ec, ev, tb = err |
|
434 | 430 | captured = self.stream_capturer.get_buffer().decode('utf-8', 'replace') |
|
435 | 431 | if captured.strip(): |
|
436 | 432 | ev = safe_str(ev) |
|
437 | 433 | out = [ev, '>> begin captured subprocess output <<', |
|
438 | 434 | captured, |
|
439 | 435 | '>> end captured subprocess output <<'] |
|
440 | 436 | return ec, '\n'.join(out), tb |
|
441 | 437 | |
|
442 | 438 | return err |
|
443 | 439 | |
|
444 | 440 | formatError = formatFailure |
|
445 | 441 | |
|
446 | 442 | def finalize(self, result): |
|
447 | 443 | self.stream_capturer.halt() |
|
448 | 444 | |
|
449 | 445 | |
|
450 | 446 | def run_iptest(): |
|
451 | 447 | """Run the IPython test suite using nose. |
|
452 | 448 | |
|
453 | 449 | This function is called when this script is **not** called with the form |
|
454 | 450 | `iptest all`. It simply calls nose with appropriate command line flags |
|
455 | 451 | and accepts all of the standard nose arguments. |
|
456 | 452 | """ |
|
457 | 453 | # Apply our monkeypatch to Xunit |
|
458 | 454 | if '--with-xunit' in sys.argv and not hasattr(Xunit, 'orig_addError'): |
|
459 | 455 | monkeypatch_xunit() |
|
460 | 456 | |
|
461 | 457 | warnings.filterwarnings('ignore', |
|
462 | 458 | 'This will be removed soon. Use IPython.testing.util instead') |
|
463 | 459 | |
|
464 | 460 | arg1 = sys.argv[1] |
|
465 | 461 | if arg1 in test_sections: |
|
466 | 462 | section = test_sections[arg1] |
|
467 | 463 | sys.argv[1:2] = section.includes |
|
468 | 464 | elif arg1.startswith('IPython.') and arg1[8:] in test_sections: |
|
469 | 465 | section = test_sections[arg1[8:]] |
|
470 | 466 | sys.argv[1:2] = section.includes |
|
471 | 467 | else: |
|
472 | 468 | section = TestSection(arg1, includes=[arg1]) |
|
473 | 469 | |
|
474 | 470 | |
|
475 | 471 | argv = sys.argv + [ '--detailed-errors', # extra info in tracebacks |
|
476 | 472 | |
|
477 | 473 | '--with-ipdoctest', |
|
478 | 474 | '--ipdoctest-tests','--ipdoctest-extension=txt', |
|
479 | 475 | |
|
480 | 476 | # We add --exe because of setuptools' imbecility (it |
|
481 | 477 | # blindly does chmod +x on ALL files). Nose does the |
|
482 | 478 | # right thing and it tries to avoid executables, |
|
483 | 479 | # setuptools unfortunately forces our hand here. This |
|
484 | 480 | # has been discussed on the distutils list and the |
|
485 | 481 | # setuptools devs refuse to fix this problem! |
|
486 | 482 | '--exe', |
|
487 | 483 | ] |
|
488 | 484 | if '-a' not in argv and '-A' not in argv: |
|
489 | 485 | argv = argv + ['-a', '!crash'] |
|
490 | 486 | |
|
491 | 487 | if nose.__version__ >= '0.11': |
|
492 | 488 | # I don't fully understand why we need this one, but depending on what |
|
493 | 489 | # directory the test suite is run from, if we don't give it, 0 tests |
|
494 | 490 | # get run. Specifically, if the test suite is run from the source dir |
|
495 | 491 | # with an argument (like 'iptest.py IPython.core', 0 tests are run, |
|
496 | 492 | # even if the same call done in this directory works fine). It appears |
|
497 | 493 | # that if the requested package is in the current dir, nose bails early |
|
498 | 494 | # by default. Since it's otherwise harmless, leave it in by default |
|
499 | 495 | # for nose >= 0.11, though unfortunately nose 0.10 doesn't support it. |
|
500 | 496 | argv.append('--traverse-namespace') |
|
501 | 497 | |
|
502 | 498 | # use our plugin for doctesting. It will remove the standard doctest plugin |
|
503 | 499 | # if it finds it enabled |
|
504 | 500 | plugins = [ExclusionPlugin(section.excludes), IPythonDoctest(), KnownFailure(), |
|
505 | 501 | SubprocessStreamCapturePlugin() ] |
|
506 | 502 | |
|
507 | 503 | # Use working directory set by parent process (see iptestcontroller) |
|
508 | 504 | if 'IPTEST_WORKING_DIR' in os.environ: |
|
509 | 505 | os.chdir(os.environ['IPTEST_WORKING_DIR']) |
|
510 | 506 | |
|
511 | 507 | # We need a global ipython running in this process, but the special |
|
512 | 508 | # in-process group spawns its own IPython kernels, so for *that* group we |
|
513 | 509 | # must avoid also opening the global one (otherwise there's a conflict of |
|
514 | 510 | # singletons). Ultimately the solution to this problem is to refactor our |
|
515 | 511 | # assumptions about what needs to be a singleton and what doesn't (app |
|
516 | 512 | # objects should, individual shells shouldn't). But for now, this |
|
517 | 513 | # workaround allows the test suite for the inprocess module to complete. |
|
518 | 514 | if 'kernel.inprocess' not in section.name: |
|
519 | 515 | from IPython.testing import globalipapp |
|
520 | 516 | globalipapp.start_ipython() |
|
521 | 517 | |
|
522 | 518 | # Now nose can run |
|
523 | 519 | TestProgram(argv=argv, addplugins=plugins) |
|
524 | 520 | |
|
525 | 521 | if __name__ == '__main__': |
|
526 | 522 | run_iptest() |
|
527 | 523 |
|
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