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Add introductory docs about the notebook.
Fernando Perez -
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1 .. _htmlnotebook:
1 .. _htmlnotebook:
2
2
3 =========================
3 =========================
4 An HTML Notebook IPython
4 An HTML Notebook IPython
5 =========================
5 =========================
6
6
7 The IPython Notebook consists of two related components:
7 The IPython Notebook consists of two related components:
8
8
9 * An XML/JSON based Notebook document format for recording and distributing
9 * An XML/JSON based Notebook document format for recording and distributing
10 Python code and rich text.
10 Python code and rich text.
11 * A web-based user interface for authoring and running notebook documents.
11 * A web-based user interface for authoring and running notebook documents.
12
12
13 The Notebook can be used by starting the Notebook server with the
13 The Notebook can be used by starting the Notebook server with the
14 command::
14 command::
15
15
16 $ ipython notebook
16 $ ipython notebook
17
17
18 Note that by default, the notebook doesn't load pylab, it's just a normal
19 IPython session like any other. If you want pylab support, you must use::
20
21 $ ipython notebook --pylab
22
23 which will behave similar to the terminal and Qt console versions, using your
24 default matplotlib backend and providing floating interactive plot windows. If
25 you want inline figures, you must manually select the ``inline`` backend::
26
27 $ ipython notebook --pylab inline
28
18 This server uses the same ZeroMQ-based two process kernel architecture as
29 This server uses the same ZeroMQ-based two process kernel architecture as
19 the QT Console as well Tornado for serving HTTP requests. Some of the main
30 the QT Console as well Tornado for serving HTTP requests. Some of the main
20 features of the Notebook include:
31 features of the Notebook include:
21
32
22 * Display rich data (png/html/latex/svg) in the browser as a result of
33 * Display rich data (png/html/latex/svg) in the browser as a result of
23 computations.
34 computations.
24 * Compose text cells using HTML and Markdown.
35 * Compose text cells using HTML and Markdown.
25 * Import and export notebook documents in range of formats (.ipynb, .json, .py).
36 * Import and export notebook documents in range of formats (.ipynb, .json, .py).
26 * In browser syntax highlighting, tab completion and autoindentation.
37 * In browser syntax highlighting, tab completion and autoindentation.
27 * Inline matplotlib plots that can be stored in Notebook documents and opened
38 * Inline matplotlib plots that can be stored in Notebook documents and opened
28 later.
39 later.
29
40
30 See :ref:`our installation documentation <install_index>` for directions on
41 See :ref:`our installation documentation <install_index>` for directions on
31 how to install the notebook and its dependencies.
42 how to install the notebook and its dependencies.
32
43
44 .. note::
45
46 You can start more than one notebook server at the same time, if you want to
47 work on notebooks in different directories. By default the first notebook
48 server starts in port 8888, later notebooks search for random ports near
49 that one. You can also manually specify the port with the ``--port``
50 option, if you want persistent URLs you can bookmark.
51
52
33 Basic Usage
53 Basic Usage
34 ===========
54 ===========
35
55
56 The landing page of the notebook server application, which we call the IPython
57 Notebook *dashboard*, shows the notebooks currently available in the directory
58 in which the application was started, and allows you to create new notebooks.
59
60 A notebook is a combination of two things:
61
62 1. an interactive session connected to an IPython kernel, controlled by a web
63 application that can send input to the console and display many types of output
64 (text, graphics, mathematics and more). This is the same kernel used by the
65 :ref:`Qt console <qt_console>`, but in this case the web console sends input in
66 persistent cells that you can edit in-place instead of the vertically scrolling
67 terminal style used by the Qt console.
68
69 2. a document that can save the inputs and outputs of the session as well as
70 additional text that accompanies the code but is not meant for execution. In
71 this way, notebook files serve as a complete computational record of a session
72 including explanatory text and mathematics, code and resulting figures. These
73 documents are internally JSON files and are saved with the ``.ipynb``
74 extension.
75
76 If you have ever used the Mathematica or Sage notebooks (the latter is also
77 web-based__) you should feel right at home. If you have not, you should be
78 able to learn how to use it in just a few minutes.
79
80 .. __: http://sagenb.org
81
82
83 Creating and editing notebooks
84 ------------------------------
85
86 You can create new notebooks from the dashboard with the ``New Notebook``
87 button or open existing ones by clicking on their name. Once in a notebook,
88 your browser tab will reflect the name of that notebook (prefixed with "IPy:").
89 The URL for that notebook is not meant to be human-readable, but it is
90 persistent across invocations of the notebook server *as long as you don't
91 rename the notebook*, so you can bookmark them for future use.
92
93 You can also drag and dropp into the area listing files any python file: it
94 will be imported into a notebook with the same name (but ``.ipynb`` extension)
95 located in the directory where the notebook server was started. This notebook
96 will consist of a single cell with all the code in the file, which you can
97 later manually partition into individual cells for gradual execution, add text
98 and graphics, etc.
99
100 Workflow and limitations
101 ------------------------
102
103 The normal workflow in a notebook is quite similar to a normal IPython session,
104 with the difference that you can edit a cell in-place multiple times until you
105 obtain the desired results rather than having to rerun separate scripts with
106 the ``%run`` magic (though magics also work in the notebook). Typically
107 you'll work on a problem in pieces, organizing related pieces into cells and
108 moving forward as previous parts work correctly. This is much more convenient
109 for interactive exploration than breaking up a computation into scripts that
110 must be executed together, especially if parts of them take a long time to run
111 (you can use tricks with namespaces and ``%run -i``, but we think the notebook
112 is a more natural solution for that kind of problem).
113
114 The only significant limitation the notebook currently has, compared to the qt
115 console, is that it can not run any code that expects input from the kernel
116 (such as scripts that call :func:`raw_input`). Very importantly, this means
117 that the ``%debug`` magic does *not* work in the notebook! We intend to
118 correct this limitation, but in the meantime, there is a way to debug problems
119 in the notebook: you can attach a Qt console to your existing notebook kernel,
120 and run ``%debug`` from the Qt console. Simply look for the lines in the
121 terminal where you started the kernel that read something like::
122
123 [IPKernelApp] To connect another client to this kernel, use:
124 [IPKernelApp] --existing --shell=53328 --iopub=53817 --stdin=34736 --hb=45543
125
126 and then start a qt console pointing to that kernel::
127
128 ipython qtconsole --existing --shell=53328 --iopub=53817 --stdin=34736 --hb=45543
129
130
131 Text input
132 ----------
133
134 In addition to code cells and the output they procude (such as figures), you
135 can also type text not meant for execution. To type text, change the type of a
136 cell from ``Code`` to ``Markdown`` by using the button or the :kbd:`C-m m`
137 keybinding (see below). You can then type any text in Markdown_ syntax, as
138 well as mathematical expressions if you use ``$...$`` for inline math or
139 ``$$...$$`` for displayed math.
140
141 Exporting a notebook
142 --------------------
143
144 If you want to provide others with a static HTML or PDF view of your notebook,
145 use the ``Print`` button. This opens a static view of the document, which you
146 can print to PDF using your operating system's facilities, or save to a file
147 with your web browser's 'Save' option (note that typically, this will create
148 both an html file *and* a directory called `notebook_name_files` next to it
149 that contains all the necessary style information, so if you intend to share
150 this, you must send the directory along with the main html file).
151
152 The `Download` button lets you save a notebook file to the Download area
153 configured by your web browser (particularly useful if you are running the
154 notebook server on a remote host and need a file locally). The notebook is
155 saved by default with the ``.ipynb`` extension and the files contain JSON data
156 that is not meant for human editing or consumption. But you can always export
157 the input part of a notebook to a plain python script by choosing Python format
158 in the `Download` drop list. This removes all output and saves the text cells
159 in comment areas.
160
161 .. warning::
162
163 While in simple cases you can roundtrip a notebook to Python, edit the
164 python file and import it back without loss, this is in general *not
165 guaranteed to work at all*. As the notebook format evolves in complexity,
166 there will be attributes of the notebook that will not survive a roundtrip
167 through the Python form. You should think of the Python format as a way to
168 output a script version of a notebook and the import capabilities as a way
169 to load existing code to get a notebook started. But the Python version is
170 *not* an alternate Python format.
171
172
173 Keyboard use
174 ------------
175
176 All actions in the notebook can be achieved with the mouse, but we have also
177 added keyboard shortcuts for the most common ones, so that productive use of
178 the notebook can be achieved with minimal mouse intervention. The main
179 key bindings you need to remember are:
180
181 * :kbd:`Shift-Enter`: execute the current cell (similar to the Qt console),
182 show output (if any) and create a new cell below. Note that in the notebook,
183 simply using :kbd:`Enter` *never* forces execution, it simply inserts a new
184 line in the current cell. Therefore, in the notebook you must always use
185 :kbd:`Shift-Enter` to get execution (or use the mouse and click on the ``Run
186 Selected`` button).
187
188 * :kbd:`Control-Enter`: execute the current cell in "terminal mode", where any
189 output is shown but the cursor cursor stays in the current cell, whose input
190 area is flushed empty. This is convenient to do quick in-place experiments
191 or query things like filesystem content without creating additional cells you
192 may not want saved in your notebook.
193
194 * :kbd:`Control-m`: this is the prefix for all other keybindings, which consist
195 of an additional single letter. Type :kbd:`Ctrl-m h` (that is, the sole
196 letter :kbd:`h` after :kbd:`Ctrl-m`) and IPython will show you the remaining
197 available keybindings.
198
199
36 Notebook document format
200 Notebook document format
37 ========================
201 ========================
38
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