Don't warn on empty modules when scanning API

docs/sphinxext/apigen.py

@@ -1,421 +1,421 b''
 """Attempt to generate templates for module reference with Sphinx
 
 XXX - we exclude extension modules
 
 To include extension modules, first identify them as valid in the
 ``_uri2path`` method, then handle them in the ``_parse_module`` script.
 
 We get functions and classes by parsing the text of .py files.
 Alternatively we could import the modules for discovery, and we'd have
 to do that for extension modules.  This would involve changing the
 ``_parse_module`` method to work via import and introspection, and
 might involve changing ``discover_modules`` (which determines which
 files are modules, and therefore which module URIs will be passed to
 ``_parse_module``).
 
 NOTE: this is a modified version of a script originally shipped with the
 PyMVPA project, which we've adapted for NIPY use.  PyMVPA is an MIT-licensed
 project."""
 
 from __future__ import print_function
 
 # Stdlib imports
 import ast
 import os
 import re
 
 class Obj(object):
     '''Namespace to hold arbitrary information.'''
     def __init__(self, **kwargs):
         for k, v in kwargs.items():
             setattr(self, k, v)
                                         
 class FuncClsScanner(ast.NodeVisitor):
     """Scan a module for top-level functions and classes.
     
     Skips objects with an @undoc decorator, or a name starting with '_'.
     """
     def __init__(self):
         ast.NodeVisitor.__init__(self)
         self.classes = []
         self.classes_seen = set()
         self.functions = []
     
     @staticmethod
     def has_undoc_decorator(node):
         return any(isinstance(d, ast.Name) and d.id == 'undoc' \
                                 for d in node.decorator_list)
 
     def visit_If(self, node):
         if isinstance(node.test, ast.Compare) \
                 and isinstance(node.test.left, ast.Name) \
                 and node.test.left.id == '__name__':
             return   # Ignore classes defined in "if __name__ == '__main__':"
 
         self.generic_visit(node)
     
     def visit_FunctionDef(self, node):
         if not (node.name.startswith('_') or self.has_undoc_decorator(node)) \
                 and node.name not in self.functions:
             self.functions.append(node.name)
     
     def visit_ClassDef(self, node):
         if not (node.name.startswith('_') or self.has_undoc_decorator(node)) \
                 and node.name not in self.classes_seen:
             cls = Obj(name=node.name)
             cls.has_init = any(isinstance(n, ast.FunctionDef) and \
                                 n.name=='__init__' for n in node.body)
             self.classes.append(cls)
             self.classes_seen.add(node.name)
     
     def scan(self, mod):
         self.visit(mod)
         return self.functions, self.classes
 
 # Functions and classes
 class ApiDocWriter(object):
     ''' Class for automatic detection and parsing of API docs
     to Sphinx-parsable reST format'''
 
     # only separating first two levels
     rst_section_levels = ['*', '=', '-', '~', '^']
 
     def __init__(self,
                  package_name,
                  rst_extension='.rst',
                  package_skip_patterns=None,
                  module_skip_patterns=None,
                  ):
         ''' Initialize package for parsing
 
         Parameters
         ----------
         package_name : string
             Name of the top-level package.  *package_name* must be the
             name of an importable package
         rst_extension : string, optional
             Extension for reST files, default '.rst'
         package_skip_patterns : None or sequence of {strings, regexps}
             Sequence of strings giving URIs of packages to be excluded
             Operates on the package path, starting at (including) the
             first dot in the package path, after *package_name* - so,
             if *package_name* is ``sphinx``, then ``sphinx.util`` will
             result in ``.util`` being passed for earching by these
             regexps.  If is None, gives default. Default is:
             ['\.tests$']
         module_skip_patterns : None or sequence
             Sequence of strings giving URIs of modules to be excluded
             Operates on the module name including preceding URI path,
             back to the first dot after *package_name*.  For example
             ``sphinx.util.console`` results in the string to search of
             ``.util.console``
             If is None, gives default. Default is:
             ['\.setup$', '\._']
         '''
         if package_skip_patterns is None:
             package_skip_patterns = ['\\.tests$']
         if module_skip_patterns is None:
             module_skip_patterns = ['\\.setup$', '\\._']
         self.package_name = package_name
         self.rst_extension = rst_extension
         self.package_skip_patterns = package_skip_patterns
         self.module_skip_patterns = module_skip_patterns
 
     def get_package_name(self):
         return self._package_name
 
     def set_package_name(self, package_name):
         ''' Set package_name
 
         >>> docwriter = ApiDocWriter('sphinx')
         >>> import sphinx
         >>> docwriter.root_path == sphinx.__path__[0]
         True
         >>> docwriter.package_name = 'docutils'
         >>> import docutils
         >>> docwriter.root_path == docutils.__path__[0]
         True
         '''
         # It's also possible to imagine caching the module parsing here
         self._package_name = package_name
         self.root_module = __import__(package_name)
         self.root_path = self.root_module.__path__[0]
         self.written_modules = None
 
     package_name = property(get_package_name, set_package_name, None,
                             'get/set package_name')
 
     def _uri2path(self, uri):
         ''' Convert uri to absolute filepath
 
         Parameters
         ----------
         uri : string
             URI of python module to return path for
 
         Returns
         -------
         path : None or string
             Returns None if there is no valid path for this URI
             Otherwise returns absolute file system path for URI
 
         Examples
         --------
         >>> docwriter = ApiDocWriter('sphinx')
         >>> import sphinx
         >>> modpath = sphinx.__path__[0]
         >>> res = docwriter._uri2path('sphinx.builder')
         >>> res == os.path.join(modpath, 'builder.py')
         True
         >>> res = docwriter._uri2path('sphinx')
         >>> res == os.path.join(modpath, '__init__.py')
         True
         >>> docwriter._uri2path('sphinx.does_not_exist')
 
         '''
         if uri == self.package_name:
             return os.path.join(self.root_path, '__init__.py')
         path = uri.replace('.', os.path.sep)
         path = path.replace(self.package_name + os.path.sep, '')
         path = os.path.join(self.root_path, path)
         # XXX maybe check for extensions as well?
         if os.path.exists(path + '.py'): # file
             path += '.py'
         elif os.path.exists(os.path.join(path, '__init__.py')):
             path = os.path.join(path, '__init__.py')
         else:
             return None
         return path
 
     def _path2uri(self, dirpath):
         ''' Convert directory path to uri '''
         relpath = dirpath.replace(self.root_path, self.package_name)
         if relpath.startswith(os.path.sep):
             relpath = relpath[1:]
         return relpath.replace(os.path.sep, '.')
 
     def _parse_module(self, uri):
         ''' Parse module defined in *uri* '''
         filename = self._uri2path(uri)
         if filename is None:
             # nothing that we could handle here.
             return ([],[])
         with open(filename, 'rb') as f:
             mod = ast.parse(f.read())
         return FuncClsScanner().scan(mod)
 
     def generate_api_doc(self, uri):
         '''Make autodoc documentation template string for a module
 
         Parameters
         ----------
         uri : string
             python location of module - e.g 'sphinx.builder'
 
         Returns
         -------
         S : string
             Contents of API doc
         '''
         # get the names of all classes and functions
         functions, classes = self._parse_module(uri)
         if not len(functions) and not len(classes):
-            print ('WARNING: Empty -', uri)  # dbg
+            #print ('WARNING: Empty -', uri)  # dbg
             return ''
 
         # Make a shorter version of the uri that omits the package name for
         # titles
         uri_short = re.sub(r'^%s\.' % self.package_name,'',uri)
 
         ad = '.. AUTO-GENERATED FILE -- DO NOT EDIT!\n\n'
 
         # Set the chapter title to read 'Module:' for all modules except for the
         # main packages
         if '.' in uri:
             chap_title = 'Module: :mod:`' + uri_short + '`'
         else:
             chap_title = ':mod:`' + uri_short + '`'
         ad += chap_title + '\n' + self.rst_section_levels[1] * len(chap_title)
 
         ad += '\n.. automodule:: ' + uri + '\n'
         ad += '\n.. currentmodule:: ' + uri + '\n'
         
         if classes:
             subhead = str(len(classes)) + (' Classes' if len(classes) > 1 else ' Class')
             ad += '\n'+ subhead + '\n' + \
                   self.rst_section_levels[2] * len(subhead) + '\n'
 
         for c in classes:
             ad += '\n.. autoclass:: ' + c.name + '\n'
             # must NOT exclude from index to keep cross-refs working
             ad += '  :members:\n' \
                   '  :show-inheritance:\n'
             if c.has_init:
                   ad += '\n  .. automethod:: __init__\n'
         
         if functions:
             subhead = str(len(functions)) + (' Functions' if len(functions) > 1 else ' Function')
             ad += '\n'+ subhead + '\n' + \
                   self.rst_section_levels[2] * len(subhead) + '\n'
         for f in functions:
             # must NOT exclude from index to keep cross-refs working
             ad += '\n.. autofunction:: ' + uri + '.' + f + '\n\n'
         return ad
 
     def _survives_exclude(self, matchstr, match_type):
         ''' Returns True if *matchstr* does not match patterns
 
         ``self.package_name`` removed from front of string if present
 
         Examples
         --------
         >>> dw = ApiDocWriter('sphinx')
         >>> dw._survives_exclude('sphinx.okpkg', 'package')
         True
         >>> dw.package_skip_patterns.append('^\\.badpkg$')
         >>> dw._survives_exclude('sphinx.badpkg', 'package')
         False
         >>> dw._survives_exclude('sphinx.badpkg', 'module')
         True
         >>> dw._survives_exclude('sphinx.badmod', 'module')
         True
         >>> dw.module_skip_patterns.append('^\\.badmod$')
         >>> dw._survives_exclude('sphinx.badmod', 'module')
         False
         '''
         if match_type == 'module':
             patterns = self.module_skip_patterns
         elif match_type == 'package':
             patterns = self.package_skip_patterns
         else:
             raise ValueError('Cannot interpret match type "%s"'
                              % match_type)
         # Match to URI without package name
         L = len(self.package_name)
         if matchstr[:L] == self.package_name:
             matchstr = matchstr[L:]
         for pat in patterns:
             try:
                 pat.search
             except AttributeError:
                 pat = re.compile(pat)
             if pat.search(matchstr):
                 return False
         return True
 
     def discover_modules(self):
         ''' Return module sequence discovered from ``self.package_name``
 
 
         Parameters
         ----------
         None
 
         Returns
         -------
         mods : sequence
             Sequence of module names within ``self.package_name``
 
         Examples
         --------
         >>> dw = ApiDocWriter('sphinx')
         >>> mods = dw.discover_modules()
         >>> 'sphinx.util' in mods
         True
         >>> dw.package_skip_patterns.append('\.util$')
         >>> 'sphinx.util' in dw.discover_modules()
         False
         >>>
         '''
         modules = [self.package_name]
         # raw directory parsing
         for dirpath, dirnames, filenames in os.walk(self.root_path):
             # Check directory names for packages
             root_uri = self._path2uri(os.path.join(self.root_path,
                                                    dirpath))
             for dirname in dirnames[:]: # copy list - we modify inplace
                 package_uri = '.'.join((root_uri, dirname))
                 if (self._uri2path(package_uri) and
                     self._survives_exclude(package_uri, 'package')):
                     modules.append(package_uri)
                 else:
                     dirnames.remove(dirname)
             # Check filenames for modules
             for filename in filenames:
                 module_name = filename[:-3]
                 module_uri = '.'.join((root_uri, module_name))
                 if (self._uri2path(module_uri) and
                     self._survives_exclude(module_uri, 'module')):
                     modules.append(module_uri)
         return sorted(modules)
 
     def write_modules_api(self, modules,outdir):
         # write the list
         written_modules = []
         for m in modules:
             api_str = self.generate_api_doc(m)
             if not api_str:
                 continue
             # write out to file
             outfile = os.path.join(outdir,
                                    m + self.rst_extension)
             fileobj = open(outfile, 'wt')
             fileobj.write(api_str)
             fileobj.close()
             written_modules.append(m)
         self.written_modules = written_modules
 
     def write_api_docs(self, outdir):
         """Generate API reST files.
 
         Parameters
         ----------
         outdir : string
             Directory name in which to store files
             We create automatic filenames for each module
 
         Returns
         -------
         None
 
         Notes
         -----
         Sets self.written_modules to list of written modules
         """
         if not os.path.exists(outdir):
             os.mkdir(outdir)
         # compose list of modules
         modules = self.discover_modules()
         self.write_modules_api(modules,outdir)
 
     def write_index(self, outdir, path='gen.rst', relative_to=None):
         """Make a reST API index file from written files
 
         Parameters
         ----------
         outdir : string
             Directory to which to write generated index file
         path : string
             Filename to write index to
         relative_to : string
             path to which written filenames are relative.  This
             component of the written file path will be removed from
             outdir, in the generated index.  Default is None, meaning,
             leave path as it is.
         """
         if self.written_modules is None:
             raise ValueError('No modules written')
         # Get full filename path
         path = os.path.join(outdir, path)
         # Path written into index is relative to rootpath
         if relative_to is not None:
             relpath = outdir.replace(relative_to + os.path.sep, '')
         else:
             relpath = outdir
         idx = open(path,'wt')
         w = idx.write
         w('.. AUTO-GENERATED FILE -- DO NOT EDIT!\n\n')
         w('.. toctree::\n\n')
         for f in self.written_modules:
             w('   %s\n' % os.path.join(relpath,f))
         idx.close()