Fix the sphinx_ipython directive.

Also use it in our docs so that there is some kind of tests.
Document ok-except better (and test). Work w/o matplotlib installed.
Imperfect so far.

Fixes gh-11320

IPython/core/interactiveshell.py

@@ -1,3648 +1,3648 b''
 # -*- coding: utf-8 -*-
 """Main IPython class."""
 
 #-----------------------------------------------------------------------------
 #  Copyright (C) 2001 Janko Hauser <[e-mail]>
 #  Copyright (C) 2001-2007 Fernando Perez. <[e-mail]>
 #  Copyright (C) 2008-2011  The IPython Development Team
 #
 #  Distributed under the terms of the BSD License.  The full license is in
 #  the file COPYING, distributed as part of this software.
 #-----------------------------------------------------------------------------
 
 
 import abc
 import ast
 import asyncio
 import atexit
 import builtins as builtin_mod
 import functools
 import os
 import re
 import runpy
 import sys
 import tempfile
 import traceback
 import types
 import subprocess
 import warnings
 from io import open as io_open
 
 from pickleshare import PickleShareDB
 
 from traitlets.config.configurable import SingletonConfigurable
 from traitlets.utils.importstring import import_item
 from IPython.core import oinspect
 from IPython.core import magic
 from IPython.core import page
 from IPython.core import prefilter
 from IPython.core import ultratb
 from IPython.core.alias import Alias, AliasManager
 from IPython.core.autocall import ExitAutocall
 from IPython.core.builtin_trap import BuiltinTrap
 from IPython.core.events import EventManager, available_events
 from IPython.core.compilerop import CachingCompiler, check_linecache_ipython
 from IPython.core.debugger import Pdb
 from IPython.core.display_trap import DisplayTrap
 from IPython.core.displayhook import DisplayHook
 from IPython.core.displaypub import DisplayPublisher
 from IPython.core.error import InputRejected, UsageError
 from IPython.core.extensions import ExtensionManager
 from IPython.core.formatters import DisplayFormatter
 from IPython.core.history import HistoryManager
 from IPython.core.inputtransformer2 import ESC_MAGIC, ESC_MAGIC2
 from IPython.core.logger import Logger
 from IPython.core.macro import Macro
 from IPython.core.payload import PayloadManager
 from IPython.core.prefilter import PrefilterManager
 from IPython.core.profiledir import ProfileDir
 from IPython.core.usage import default_banner
 from IPython.display import display
 from IPython.testing.skipdoctest import skip_doctest
 from IPython.utils import PyColorize
 from IPython.utils import io
 from IPython.utils import py3compat
 from IPython.utils import openpy
 from IPython.utils.decorators import undoc
 from IPython.utils.io import ask_yes_no
 from IPython.utils.ipstruct import Struct
 from IPython.paths import get_ipython_dir
 from IPython.utils.path import get_home_dir, get_py_filename, ensure_dir_exists
 from IPython.utils.process import system, getoutput
 from IPython.utils.strdispatch import StrDispatch
 from IPython.utils.syspathcontext import prepended_to_syspath
 from IPython.utils.text import format_screen, LSString, SList, DollarFormatter
 from IPython.utils.tempdir import TemporaryDirectory
 from traitlets import (
     Integer, Bool, CaselessStrEnum, Enum, List, Dict, Unicode, Instance, Type,
     observe, default, validate, Any
 )
 from warnings import warn
 from logging import error
 import IPython.core.hooks
 
-from typing import List as ListType
+from typing import List as ListType, Tuple
 from ast import AST
 
 # NoOpContext is deprecated, but ipykernel imports it from here.
 # See https://github.com/ipython/ipykernel/issues/157
 from IPython.utils.contexts import NoOpContext
 
 try:
     import docrepr.sphinxify as sphx
 
     def sphinxify(doc):
         with TemporaryDirectory() as dirname:
             return {
                 'text/html': sphx.sphinxify(doc, dirname),
                 'text/plain': doc
             }
 except ImportError:
     sphinxify = None
 
 
 class ProvisionalWarning(DeprecationWarning):
     """
     Warning class for unstable features
     """
     pass
 
 if sys.version_info > (3,6):
     _assign_nodes         = (ast.AugAssign, ast.AnnAssign, ast.Assign)
     _single_targets_nodes = (ast.AugAssign, ast.AnnAssign)
 else:
     _assign_nodes         = (ast.AugAssign, ast.Assign )
     _single_targets_nodes = (ast.AugAssign, )
 
 #-----------------------------------------------------------------------------
 # Await Helpers
 #-----------------------------------------------------------------------------
 
 def removed_co_newlocals(function:types.FunctionType) -> types.FunctionType:
     """Return a function that do not create a new local scope. 
 
     Given a function, create a clone of this function where the co_newlocal flag
     has been removed, making this function code actually run in the sourounding
     scope. 
 
     We need this in order to run asynchronous code in user level namespace.
     """
     from types import CodeType, FunctionType
     CO_NEWLOCALS = 0x0002
     code = function.__code__
     new_code = CodeType(
         code.co_argcount, 
         code.co_kwonlyargcount,
         code.co_nlocals, 
         code.co_stacksize, 
         code.co_flags & ~CO_NEWLOCALS,
         code.co_code, 
         code.co_consts,
         code.co_names, 
         code.co_varnames, 
         code.co_filename, 
         code.co_name, 
         code.co_firstlineno, 
         code.co_lnotab, 
         code.co_freevars, 
         code.co_cellvars
     )
     return FunctionType(new_code, globals(), function.__name__, function.__defaults__)
 
 
 # we still need to run things using the asyncio eventloop, but there is no
 # async integration
 from .async_helpers import (_asyncio_runner,  _asyncify, _pseudo_sync_runner)
 
 if sys.version_info > (3, 5):
     from .async_helpers import _curio_runner, _trio_runner, _should_be_async
 else :
     _curio_runner = _trio_runner = None
 
     def _should_be_async(cell:str)->bool:
         return False
 
 
 def _ast_asyncify(cell:str, wrapper_name:str) -> ast.Module:
     """
     Parse a cell with top-level await and modify the AST to be able to run it later.
 
     Parameter
     ---------
 
     cell: str
         The code cell to asyncronify
     wrapper_name: str
         The name of the function to be used to wrap the passed `cell`. It is
         advised to **not** use a python identifier in order to not pollute the
         global namespace in which the function will be ran.
 
     Return
     ------
 
     A module object AST containing **one** function named `wrapper_name`.
 
     The given code is wrapped in a async-def function, parsed into an AST, and
     the resulting function definition AST is modified to return the last
     expression.
 
     The last expression or await node is moved into a return statement at the
     end of the function, and removed from its original location. If the last
     node is not Expr or Await nothing is done.
 
     The function `__code__` will need to be later modified  (by
     ``removed_co_newlocals``) in a subsequent step to not create new `locals()`
     meaning that the local and global scope are the same, ie as if the body of
     the function was at module level.
 
     Lastly a call to `locals()` is made just before the last expression of the
     function, or just after the last assignment or statement to make sure the
     global dict is updated as python function work with a local fast cache which
     is updated only on `local()` calls.
     """
 
     from ast import Expr, Await, Return
     tree = ast.parse(_asyncify(cell))
 
     function_def = tree.body[0]
     function_def.name = wrapper_name
     try_block = function_def.body[0]
     lastexpr = try_block.body[-1]
     if isinstance(lastexpr, (Expr, Await)):
         try_block.body[-1] = Return(lastexpr.value)
     ast.fix_missing_locations(tree)
     return tree
 #-----------------------------------------------------------------------------
 # Globals
 #-----------------------------------------------------------------------------
 
 # compiled regexps for autoindent management
 dedent_re = re.compile(r'^\s+raise|^\s+return|^\s+pass')
 
 #-----------------------------------------------------------------------------
 # Utilities
 #-----------------------------------------------------------------------------
 
 @undoc
 def softspace(file, newvalue):
     """Copied from code.py, to remove the dependency"""
 
     oldvalue = 0
     try:
         oldvalue = file.softspace
     except AttributeError:
         pass
     try:
         file.softspace = newvalue
     except (AttributeError, TypeError):
         # "attribute-less object" or "read-only attributes"
         pass
     return oldvalue
 
 @undoc
 def no_op(*a, **kw):
     pass
 
 
 class SpaceInInput(Exception): pass
 
 
 def get_default_colors():
     "DEPRECATED"
     warn('get_default_color is deprecated since IPython 5.0, and returns `Neutral` on all platforms.',
         DeprecationWarning, stacklevel=2)
     return 'Neutral'
 
 
 class SeparateUnicode(Unicode):
     r"""A Unicode subclass to validate separate_in, separate_out, etc.
 
     This is a Unicode based trait that converts '0'->'' and ``'\\n'->'\n'``.
     """
 
     def validate(self, obj, value):
         if value == '0': value = ''
         value = value.replace('\\n','\n')
         return super(SeparateUnicode, self).validate(obj, value)
 
 
 @undoc
 class DummyMod(object):
     """A dummy module used for IPython's interactive module when
     a namespace must be assigned to the module's __dict__."""
     __spec__ = None
 
 
 class ExecutionInfo(object):
     """The arguments used for a call to :meth:`InteractiveShell.run_cell`
 
     Stores information about what is going to happen.
     """
     raw_cell = None
     store_history = False
     silent = False
     shell_futures = True
 
     def __init__(self, raw_cell, store_history, silent, shell_futures):
         self.raw_cell = raw_cell
         self.store_history = store_history
         self.silent = silent
         self.shell_futures = shell_futures
 
     def __repr__(self):
         name = self.__class__.__qualname__
         raw_cell = ((self.raw_cell[:50] + '..')
                     if len(self.raw_cell) > 50 else self.raw_cell)
         return '<%s object at %x, raw_cell="%s" store_history=%s silent=%s shell_futures=%s>' %\
                (name, id(self), raw_cell, self.store_history, self.silent, self.shell_futures)
 
 
 class ExecutionResult(object):
     """The result of a call to :meth:`InteractiveShell.run_cell`
 
     Stores information about what took place.
     """
     execution_count = None
     error_before_exec = None
     error_in_exec = None
     info = None
     result = None
 
     def __init__(self, info):
         self.info = info
 
     @property
     def success(self):
         return (self.error_before_exec is None) and (self.error_in_exec is None)
 
     def raise_error(self):
         """Reraises error if `success` is `False`, otherwise does nothing"""
         if self.error_before_exec is not None:
             raise self.error_before_exec
         if self.error_in_exec is not None:
             raise self.error_in_exec
 
     def __repr__(self):
         name = self.__class__.__qualname__
         return '<%s object at %x, execution_count=%s error_before_exec=%s error_in_exec=%s info=%s result=%s>' %\
                 (name, id(self), self.execution_count, self.error_before_exec, self.error_in_exec, repr(self.info), repr(self.result))
 
 
 class InteractiveShell(SingletonConfigurable):
     """An enhanced, interactive shell for Python."""
 
     _instance = None
     
     ast_transformers = List([], help=
         """
         A list of ast.NodeTransformer subclass instances, which will be applied
         to user input before code is run.
         """
     ).tag(config=True)
 
     autocall = Enum((0,1,2), default_value=0, help=
         """
         Make IPython automatically call any callable object even if you didn't
         type explicit parentheses. For example, 'str 43' becomes 'str(43)'
         automatically. The value can be '0' to disable the feature, '1' for
         'smart' autocall, where it is not applied if there are no more
         arguments on the line, and '2' for 'full' autocall, where all callable
         objects are automatically called (even if no arguments are present).
         """
     ).tag(config=True)
 
     autoindent = Bool(True, help=
         """
         Autoindent IPython code entered interactively.
         """
     ).tag(config=True)
 
     autoawait = Bool(True, help=
         """
         Automatically run await statement in the top level repl.
         """
     ).tag(config=True)
 
     loop_runner_map ={
         'asyncio':(_asyncio_runner, True),
         'curio':(_curio_runner, True),
         'trio':(_trio_runner, True),
         'sync': (_pseudo_sync_runner, False)
     }
 
     loop_runner = Any(default_value="IPython.core.interactiveshell._asyncio_runner",
         allow_none=True,
         help="""Select the loop runner that will be used to execute top-level asynchronous code"""
     ).tag(config=True)
 
     @default('loop_runner')
     def _default_loop_runner(self):
         return import_item("IPython.core.interactiveshell._asyncio_runner")
 
     @validate('loop_runner')
     def _import_runner(self, proposal):
         if isinstance(proposal.value, str):
             if proposal.value in self.loop_runner_map:
                 runner, autoawait = self.loop_runner_map[proposal.value]
                 self.autoawait = autoawait
                 return runner
             runner = import_item(proposal.value)
             if not callable(runner):
                 raise ValueError('loop_runner must be callable')
             return runner
         if not callable(proposal.value):
             raise ValueError('loop_runner must be callable')
         return proposal.value
 
     automagic = Bool(True, help=
         """
         Enable magic commands to be called without the leading %.
         """
     ).tag(config=True)
     
     banner1 = Unicode(default_banner,
         help="""The part of the banner to be printed before the profile"""
     ).tag(config=True)
     banner2 = Unicode('',
         help="""The part of the banner to be printed after the profile"""
     ).tag(config=True)
 
     cache_size = Integer(1000, help=
         """
         Set the size of the output cache.  The default is 1000, you can
         change it permanently in your config file.  Setting it to 0 completely
         disables the caching system, and the minimum value accepted is 3 (if
         you provide a value less than 3, it is reset to 0 and a warning is
         issued).  This limit is defined because otherwise you'll spend more
         time re-flushing a too small cache than working
         """
     ).tag(config=True)
     color_info = Bool(True, help=
         """
         Use colors for displaying information about objects. Because this
         information is passed through a pager (like 'less'), and some pagers
         get confused with color codes, this capability can be turned off.
         """
     ).tag(config=True)
     colors = CaselessStrEnum(('Neutral', 'NoColor','LightBG','Linux'),
                              default_value='Neutral',
         help="Set the color scheme (NoColor, Neutral, Linux, or LightBG)."
     ).tag(config=True)
     debug = Bool(False).tag(config=True)
     disable_failing_post_execute = Bool(False,
         help="Don't call post-execute functions that have failed in the past."
     ).tag(config=True)
     display_formatter = Instance(DisplayFormatter, allow_none=True)
     displayhook_class = Type(DisplayHook)
     display_pub_class = Type(DisplayPublisher)
     
     sphinxify_docstring = Bool(False, help=
         """
         Enables rich html representation of docstrings. (This requires the
         docrepr module).
         """).tag(config=True)
 
     @observe("sphinxify_docstring")
     def _sphinxify_docstring_changed(self, change):
         if change['new']:
             warn("`sphinxify_docstring` is provisional since IPython 5.0 and might change in future versions." , ProvisionalWarning)
 
     enable_html_pager = Bool(False, help=
         """
         (Provisional API) enables html representation in mime bundles sent
         to pagers.
         """).tag(config=True)
 
     @observe("enable_html_pager")
     def _enable_html_pager_changed(self, change):
         if change['new']:
             warn("`enable_html_pager` is provisional since IPython 5.0 and might change in future versions.", ProvisionalWarning)
 
     data_pub_class = None
 
     exit_now = Bool(False)
     exiter = Instance(ExitAutocall)
     @default('exiter')
     def _exiter_default(self):
         return ExitAutocall(self)
     # Monotonically increasing execution counter
     execution_count = Integer(1)
     filename = Unicode("<ipython console>")
     ipython_dir= Unicode('').tag(config=True) # Set to get_ipython_dir() in __init__
 
     # Used to transform cells before running them, and check whether code is complete
     input_transformer_manager = Instance('IPython.core.inputtransformer2.TransformerManager',
                                          ())
 
     @property
     def input_transformers_cleanup(self):
         return self.input_transformer_manager.cleanup_transforms
 
     input_transformers_post = List([],
         help="A list of string input transformers, to be applied after IPython's "
              "own input transformations."
     )
 
     @property
     def input_splitter(self):
         """Make this available for backward compatibility (pre-7.0 release) with existing code.
 
         For example, ipykernel ipykernel currently uses
         `shell.input_splitter.check_complete`
         """
         from warnings import warn
         warn("`input_splitter` is deprecated since IPython 7.0, prefer `input_transformer_manager`.",
              DeprecationWarning, stacklevel=2
         )
         return self.input_transformer_manager
 
     logstart = Bool(False, help=
         """
         Start logging to the default log file in overwrite mode.
         Use `logappend` to specify a log file to **append** logs to.
         """
     ).tag(config=True)
     logfile = Unicode('', help=
         """
         The name of the logfile to use.
         """
     ).tag(config=True)
     logappend = Unicode('', help=
         """
         Start logging to the given file in append mode.
         Use `logfile` to specify a log file to **overwrite** logs to.
         """
     ).tag(config=True)
     object_info_string_level = Enum((0,1,2), default_value=0,
     ).tag(config=True)
     pdb = Bool(False, help=
         """
         Automatically call the pdb debugger after every exception.
         """
     ).tag(config=True)
     display_page = Bool(False,
         help="""If True, anything that would be passed to the pager
         will be displayed as regular output instead."""
     ).tag(config=True)
 
     # deprecated prompt traits:
     
     prompt_in1 = Unicode('In [\\#]: ',
         help="Deprecated since IPython 4.0 and ignored since 5.0, set TerminalInteractiveShell.prompts object directly."
     ).tag(config=True)
     prompt_in2 = Unicode('   .\\D.: ',
         help="Deprecated since IPython 4.0 and ignored since 5.0, set TerminalInteractiveShell.prompts object directly."
     ).tag(config=True)
     prompt_out = Unicode('Out[\\#]: ',
         help="Deprecated since IPython 4.0 and ignored since 5.0, set TerminalInteractiveShell.prompts object directly."
     ).tag(config=True)
     prompts_pad_left = Bool(True,
         help="Deprecated since IPython 4.0 and ignored since 5.0, set TerminalInteractiveShell.prompts object directly."
     ).tag(config=True)
     
     @observe('prompt_in1', 'prompt_in2', 'prompt_out', 'prompt_pad_left')
     def _prompt_trait_changed(self, change):
         name = change['name']
         warn("InteractiveShell.{name} is deprecated since IPython 4.0"
              " and ignored since 5.0, set TerminalInteractiveShell.prompts"
              " object directly.".format(name=name))
         
         # protect against weird cases where self.config may not exist:
 
     show_rewritten_input = Bool(True,
         help="Show rewritten input, e.g. for autocall."
     ).tag(config=True)
 
     quiet = Bool(False).tag(config=True)
 
     history_length = Integer(10000,
         help='Total length of command history'
     ).tag(config=True)
 
     history_load_length = Integer(1000, help=
         """
         The number of saved history entries to be loaded
         into the history buffer at startup.
         """
     ).tag(config=True)
 
     ast_node_interactivity = Enum(['all', 'last', 'last_expr', 'none', 'last_expr_or_assign'],
                                   default_value='last_expr',
                                   help="""
         'all', 'last', 'last_expr' or 'none', 'last_expr_or_assign' specifying
         which nodes should be run interactively (displaying output from expressions).
         """
     ).tag(config=True)
 
     # TODO: this part of prompt management should be moved to the frontends.
     # Use custom TraitTypes that convert '0'->'' and '\\n'->'\n'
     separate_in = SeparateUnicode('\n').tag(config=True)
     separate_out = SeparateUnicode('').tag(config=True)
     separate_out2 = SeparateUnicode('').tag(config=True)
     wildcards_case_sensitive = Bool(True).tag(config=True)
     xmode = CaselessStrEnum(('Context','Plain', 'Verbose'),
                             default_value='Context',
                             help="Switch modes for the IPython exception handlers."
                             ).tag(config=True)
 
     # Subcomponents of InteractiveShell
     alias_manager = Instance('IPython.core.alias.AliasManager', allow_none=True)
     prefilter_manager = Instance('IPython.core.prefilter.PrefilterManager', allow_none=True)
     builtin_trap = Instance('IPython.core.builtin_trap.BuiltinTrap', allow_none=True)
     display_trap = Instance('IPython.core.display_trap.DisplayTrap', allow_none=True)
     extension_manager = Instance('IPython.core.extensions.ExtensionManager', allow_none=True)
     payload_manager = Instance('IPython.core.payload.PayloadManager', allow_none=True)
     history_manager = Instance('IPython.core.history.HistoryAccessorBase', allow_none=True)
     magics_manager = Instance('IPython.core.magic.MagicsManager', allow_none=True)
 
     profile_dir = Instance('IPython.core.application.ProfileDir', allow_none=True)
     @property
     def profile(self):
         if self.profile_dir is not None:
             name = os.path.basename(self.profile_dir.location)
             return name.replace('profile_','')
 
 
     # Private interface
     _post_execute = Dict()
 
     # Tracks any GUI loop loaded for pylab
     pylab_gui_select = None
 
     last_execution_succeeded = Bool(True, help='Did last executed command succeeded')
 
     last_execution_result = Instance('IPython.core.interactiveshell.ExecutionResult', help='Result of executing the last command', allow_none=True)
 
     def __init__(self, ipython_dir=None, profile_dir=None,
                  user_module=None, user_ns=None,
                  custom_exceptions=((), None), **kwargs):
 
         # This is where traits with a config_key argument are updated
         # from the values on config.
         super(InteractiveShell, self).__init__(**kwargs)
         if 'PromptManager' in self.config:
             warn('As of IPython 5.0 `PromptManager` config will have no effect'
                  ' and has been replaced by TerminalInteractiveShell.prompts_class')
         self.configurables = [self]
 
         # These are relatively independent and stateless
         self.init_ipython_dir(ipython_dir)
         self.init_profile_dir(profile_dir)
         self.init_instance_attrs()
         self.init_environment()
         
         # Check if we're in a virtualenv, and set up sys.path.
         self.init_virtualenv()
 
         # Create namespaces (user_ns, user_global_ns, etc.)
         self.init_create_namespaces(user_module, user_ns)
         # This has to be done after init_create_namespaces because it uses
         # something in self.user_ns, but before init_sys_modules, which
         # is the first thing to modify sys.
         # TODO: When we override sys.stdout and sys.stderr before this class
         # is created, we are saving the overridden ones here. Not sure if this
         # is what we want to do.
         self.save_sys_module_state()
         self.init_sys_modules()
 
         # While we're trying to have each part of the code directly access what
         # it needs without keeping redundant references to objects, we have too
         # much legacy code that expects ip.db to exist.
         self.db = PickleShareDB(os.path.join(self.profile_dir.location, 'db'))
 
         self.init_history()
         self.init_encoding()
         self.init_prefilter()
 
         self.init_syntax_highlighting()
         self.init_hooks()
         self.init_events()
         self.init_pushd_popd_magic()
         self.init_user_ns()
         self.init_logger()
         self.init_builtins()
 
         # The following was in post_config_initialization
         self.init_inspector()
         self.raw_input_original = input
         self.init_completer()
         # TODO: init_io() needs to happen before init_traceback handlers
         # because the traceback handlers hardcode the stdout/stderr streams.
         # This logic in in debugger.Pdb and should eventually be changed.
         self.init_io()
         self.init_traceback_handlers(custom_exceptions)
         self.init_prompts()
         self.init_display_formatter()
         self.init_display_pub()
         self.init_data_pub()
         self.init_displayhook()
         self.init_magics()
         self.init_alias()
         self.init_logstart()
         self.init_pdb()
         self.init_extension_manager()
         self.init_payload()
         self.init_deprecation_warnings()
         self.hooks.late_startup_hook()
         self.events.trigger('shell_initialized', self)
         atexit.register(self.atexit_operations)
 
     def get_ipython(self):
         """Return the currently running IPython instance."""
         return self
 
     #-------------------------------------------------------------------------
     # Trait changed handlers
     #-------------------------------------------------------------------------
     @observe('ipython_dir')
     def _ipython_dir_changed(self, change):
         ensure_dir_exists(change['new'])
 
     def set_autoindent(self,value=None):
         """Set the autoindent flag.
 
         If called with no arguments, it acts as a toggle."""
         if value is None:
             self.autoindent = not self.autoindent
         else:
             self.autoindent = value
 
     #-------------------------------------------------------------------------
     # init_* methods called by __init__
     #-------------------------------------------------------------------------
 
     def init_ipython_dir(self, ipython_dir):
         if ipython_dir is not None:
             self.ipython_dir = ipython_dir
             return
 
         self.ipython_dir = get_ipython_dir()
 
     def init_profile_dir(self, profile_dir):
         if profile_dir is not None:
             self.profile_dir = profile_dir
             return
         self.profile_dir =\
             ProfileDir.create_profile_dir_by_name(self.ipython_dir, 'default')
 
     def init_instance_attrs(self):
         self.more = False
 
         # command compiler
         self.compile = CachingCompiler()
 
         # Make an empty namespace, which extension writers can rely on both
         # existing and NEVER being used by ipython itself.  This gives them a
         # convenient location for storing additional information and state
         # their extensions may require, without fear of collisions with other
         # ipython names that may develop later.
         self.meta = Struct()
 
         # Temporary files used for various purposes.  Deleted at exit.
         self.tempfiles = []
         self.tempdirs = []
 
         # keep track of where we started running (mainly for crash post-mortem)
         # This is not being used anywhere currently.
         self.starting_dir = os.getcwd()
 
         # Indentation management
         self.indent_current_nsp = 0
 
         # Dict to track post-execution functions that have been registered
         self._post_execute = {}
 
     def init_environment(self):
         """Any changes we need to make to the user's environment."""
         pass
 
     def init_encoding(self):
         # Get system encoding at startup time.  Certain terminals (like Emacs
         # under Win32 have it set to None, and we need to have a known valid
         # encoding to use in the raw_input() method
         try:
             self.stdin_encoding = sys.stdin.encoding or 'ascii'
         except AttributeError:
             self.stdin_encoding = 'ascii'
 
 
     @observe('colors')
     def init_syntax_highlighting(self, changes=None):
         # Python source parser/formatter for syntax highlighting
         pyformat = PyColorize.Parser(style=self.colors, parent=self).format
         self.pycolorize = lambda src: pyformat(src,'str')
 
     def refresh_style(self):
         # No-op here, used in subclass
         pass
 
     def init_pushd_popd_magic(self):
         # for pushd/popd management
         self.home_dir = get_home_dir()
 
         self.dir_stack = []
 
     def init_logger(self):
         self.logger = Logger(self.home_dir, logfname='ipython_log.py',
                              logmode='rotate')
 
     def init_logstart(self):
         """Initialize logging in case it was requested at the command line.
         """
         if self.logappend:
             self.magic('logstart %s append' % self.logappend)
         elif self.logfile:
             self.magic('logstart %s' % self.logfile)
         elif self.logstart:
             self.magic('logstart')
 
     def init_deprecation_warnings(self):
         """
         register default filter for deprecation warning.
 
         This will allow deprecation warning of function used interactively to show
         warning to users, and still hide deprecation warning from libraries import.
         """
         warnings.filterwarnings("default", category=DeprecationWarning, module=self.user_ns.get("__name__"))
 
     def init_builtins(self):
         # A single, static flag that we set to True.  Its presence indicates
         # that an IPython shell has been created, and we make no attempts at
         # removing on exit or representing the existence of more than one
         # IPython at a time.
         builtin_mod.__dict__['__IPYTHON__'] = True
         builtin_mod.__dict__['display'] = display
 
         self.builtin_trap = BuiltinTrap(shell=self)
 
     @observe('colors')
     def init_inspector(self, changes=None):
         # Object inspector
         self.inspector = oinspect.Inspector(oinspect.InspectColors,
                                             PyColorize.ANSICodeColors,
                                             self.colors,
                                             self.object_info_string_level)
 
     def init_io(self):
         # This will just use sys.stdout and sys.stderr. If you want to
         # override sys.stdout and sys.stderr themselves, you need to do that
         # *before* instantiating this class, because io holds onto
         # references to the underlying streams.
         # io.std* are deprecated, but don't show our own deprecation warnings
         # during initialization of the deprecated API.
         with warnings.catch_warnings():
             warnings.simplefilter('ignore', DeprecationWarning)
             io.stdout = io.IOStream(sys.stdout)
             io.stderr = io.IOStream(sys.stderr)
 
     def init_prompts(self):
         # Set system prompts, so that scripts can decide if they are running
         # interactively.
         sys.ps1 = 'In : '
         sys.ps2 = '...: '
         sys.ps3 = 'Out: '
 
     def init_display_formatter(self):
         self.display_formatter = DisplayFormatter(parent=self)
         self.configurables.append(self.display_formatter)
 
     def init_display_pub(self):
         self.display_pub = self.display_pub_class(parent=self)
         self.configurables.append(self.display_pub)
 
     def init_data_pub(self):
         if not self.data_pub_class:
             self.data_pub = None
             return
         self.data_pub = self.data_pub_class(parent=self)
         self.configurables.append(self.data_pub)
 
     def init_displayhook(self):
         # Initialize displayhook, set in/out prompts and printing system
         self.displayhook = self.displayhook_class(
             parent=self,
             shell=self,
             cache_size=self.cache_size,
         )
         self.configurables.append(self.displayhook)
         # This is a context manager that installs/revmoes the displayhook at
         # the appropriate time.
         self.display_trap = DisplayTrap(hook=self.displayhook)
 
     def init_virtualenv(self):
         """Add a virtualenv to sys.path so the user can import modules from it.
         This isn't perfect: it doesn't use the Python interpreter with which the
         virtualenv was built, and it ignores the --no-site-packages option. A
         warning will appear suggesting the user installs IPython in the
         virtualenv, but for many cases, it probably works well enough.
         
         Adapted from code snippets online.
         
         http://blog.ufsoft.org/2009/1/29/ipython-and-virtualenv
         """
         if 'VIRTUAL_ENV' not in os.environ:
             # Not in a virtualenv
             return
         
         p = os.path.normcase(sys.executable)
         p_venv = os.path.normcase(os.environ['VIRTUAL_ENV'])
 
         # executable path should end like /bin/python or \\scripts\\python.exe
         p_exe_up2 = os.path.dirname(os.path.dirname(p))
         if p_exe_up2 and os.path.exists(p_venv) and os.path.samefile(p_exe_up2, p_venv):
             # Our exe is inside the virtualenv, don't need to do anything.
             return
 
         # fallback venv detection:
         # stdlib venv may symlink sys.executable, so we can't use realpath.
         # but others can symlink *to* the venv Python, so we can't just use sys.executable.
         # So we just check every item in the symlink tree (generally <= 3)
         paths = [p]
         while os.path.islink(p):
             p = os.path.normcase(os.path.join(os.path.dirname(p), os.readlink(p)))
             paths.append(p)
         
         # In Cygwin paths like "c:\..." and '\cygdrive\c\...' are possible
         if p_venv.startswith('\\cygdrive'):
             p_venv = p_venv[11:]
         elif len(p_venv) >= 2 and p_venv[1] == ':':
             p_venv = p_venv[2:]
 
         if any(p_venv in p for p in paths):
             # Running properly in the virtualenv, don't need to do anything
             return
         
         warn("Attempting to work in a virtualenv. If you encounter problems, please "
              "install IPython inside the virtualenv.")
         if sys.platform == "win32":
             virtual_env = os.path.join(os.environ['VIRTUAL_ENV'], 'Lib', 'site-packages') 
         else:
             virtual_env = os.path.join(os.environ['VIRTUAL_ENV'], 'lib',
                        'python%d.%d' % sys.version_info[:2], 'site-packages')
         
         import site
         sys.path.insert(0, virtual_env)
         site.addsitedir(virtual_env)
 
     #-------------------------------------------------------------------------
     # Things related to injections into the sys module
     #-------------------------------------------------------------------------
 
     def save_sys_module_state(self):
         """Save the state of hooks in the sys module.
 
         This has to be called after self.user_module is created.
         """
         self._orig_sys_module_state = {'stdin': sys.stdin,
                                        'stdout': sys.stdout,
                                        'stderr': sys.stderr,
                                        'excepthook': sys.excepthook}
         self._orig_sys_modules_main_name = self.user_module.__name__
         self._orig_sys_modules_main_mod = sys.modules.get(self.user_module.__name__)
 
     def restore_sys_module_state(self):
         """Restore the state of the sys module."""
         try:
             for k, v in self._orig_sys_module_state.items():
                 setattr(sys, k, v)
         except AttributeError:
             pass
         # Reset what what done in self.init_sys_modules
         if self._orig_sys_modules_main_mod is not None:
             sys.modules[self._orig_sys_modules_main_name] = self._orig_sys_modules_main_mod
 
     #-------------------------------------------------------------------------
     # Things related to the banner
     #-------------------------------------------------------------------------
     
     @property
     def banner(self):
         banner = self.banner1
         if self.profile and self.profile != 'default':
             banner += '\nIPython profile: %s\n' % self.profile
         if self.banner2:
             banner += '\n' + self.banner2
         return banner
 
     def show_banner(self, banner=None):
         if banner is None:
             banner = self.banner
         sys.stdout.write(banner)
     
     #-------------------------------------------------------------------------
     # Things related to hooks
     #-------------------------------------------------------------------------
 
     def init_hooks(self):
         # hooks holds pointers used for user-side customizations
         self.hooks = Struct()
 
         self.strdispatchers = {}
 
         # Set all default hooks, defined in the IPython.hooks module.
         hooks = IPython.core.hooks
         for hook_name in hooks.__all__:
             # default hooks have priority 100, i.e. low; user hooks should have
             # 0-100 priority
             self.set_hook(hook_name,getattr(hooks,hook_name), 100, _warn_deprecated=False)
         
         if self.display_page:
             self.set_hook('show_in_pager', page.as_hook(page.display_page), 90)
     
     def set_hook(self,name,hook, priority=50, str_key=None, re_key=None,
                  _warn_deprecated=True):
         """set_hook(name,hook) -> sets an internal IPython hook.
 
         IPython exposes some of its internal API as user-modifiable hooks.  By
         adding your function to one of these hooks, you can modify IPython's
         behavior to call at runtime your own routines."""
 
         # At some point in the future, this should validate the hook before it
         # accepts it.  Probably at least check that the hook takes the number
         # of args it's supposed to.
 
         f = types.MethodType(hook,self)
 
         # check if the hook is for strdispatcher first
         if str_key is not None:
             sdp = self.strdispatchers.get(name, StrDispatch())
             sdp.add_s(str_key, f, priority )
             self.strdispatchers[name] = sdp
             return
         if re_key is not None:
             sdp = self.strdispatchers.get(name, StrDispatch())
             sdp.add_re(re.compile(re_key), f, priority )
             self.strdispatchers[name] = sdp
             return
 
         dp = getattr(self.hooks, name, None)
         if name not in IPython.core.hooks.__all__:
             print("Warning! Hook '%s' is not one of %s" % \
                   (name, IPython.core.hooks.__all__ ))
 
         if _warn_deprecated and (name in IPython.core.hooks.deprecated):
             alternative = IPython.core.hooks.deprecated[name]
             warn("Hook {} is deprecated. Use {} instead.".format(name, alternative), stacklevel=2)
 
         if not dp:
             dp = IPython.core.hooks.CommandChainDispatcher()
 
         try:
             dp.add(f,priority)
         except AttributeError:
             # it was not commandchain, plain old func - replace
             dp = f
 
         setattr(self.hooks,name, dp)
 
     #-------------------------------------------------------------------------
     # Things related to events
     #-------------------------------------------------------------------------
 
     def init_events(self):
         self.events = EventManager(self, available_events)
 
         self.events.register("pre_execute", self._clear_warning_registry)
 
     def register_post_execute(self, func):
         """DEPRECATED: Use ip.events.register('post_run_cell', func)
         
         Register a function for calling after code execution.
         """
         warn("ip.register_post_execute is deprecated, use "
              "ip.events.register('post_run_cell', func) instead.", stacklevel=2)
         self.events.register('post_run_cell', func)
     
     def _clear_warning_registry(self):
         # clear the warning registry, so that different code blocks with
         # overlapping line number ranges don't cause spurious suppression of
         # warnings (see gh-6611 for details)
         if "__warningregistry__" in self.user_global_ns:
             del self.user_global_ns["__warningregistry__"]
 
     #-------------------------------------------------------------------------
     # Things related to the "main" module
     #-------------------------------------------------------------------------
 
     def new_main_mod(self, filename, modname):
         """Return a new 'main' module object for user code execution.
         
         ``filename`` should be the path of the script which will be run in the
         module. Requests with the same filename will get the same module, with
         its namespace cleared.
         
         ``modname`` should be the module name - normally either '__main__' or
         the basename of the file without the extension.
         
         When scripts are executed via %run, we must keep a reference to their
         __main__ module around so that Python doesn't
         clear it, rendering references to module globals useless.
 
         This method keeps said reference in a private dict, keyed by the
         absolute path of the script. This way, for multiple executions of the
         same script we only keep one copy of the namespace (the last one),
         thus preventing memory leaks from old references while allowing the
         objects from the last execution to be accessible.
         """
         filename = os.path.abspath(filename)
         try:
             main_mod = self._main_mod_cache[filename]
         except KeyError:
             main_mod = self._main_mod_cache[filename] = types.ModuleType(
                         modname,
                         doc="Module created for script run in IPython")
         else:
             main_mod.__dict__.clear()
             main_mod.__name__ = modname
         
         main_mod.__file__ = filename
         # It seems pydoc (and perhaps others) needs any module instance to
         # implement a __nonzero__ method
         main_mod.__nonzero__ = lambda : True
         
         return main_mod
 
     def clear_main_mod_cache(self):
         """Clear the cache of main modules.
 
         Mainly for use by utilities like %reset.
 
         Examples
         --------
 
         In [15]: import IPython
 
         In [16]: m = _ip.new_main_mod(IPython.__file__, 'IPython')
 
         In [17]: len(_ip._main_mod_cache) > 0
         Out[17]: True
 
         In [18]: _ip.clear_main_mod_cache()
 
         In [19]: len(_ip._main_mod_cache) == 0
         Out[19]: True
         """
         self._main_mod_cache.clear()
 
     #-------------------------------------------------------------------------
     # Things related to debugging
     #-------------------------------------------------------------------------
 
     def init_pdb(self):
         # Set calling of pdb on exceptions
         # self.call_pdb is a property
         self.call_pdb = self.pdb
 
     def _get_call_pdb(self):
         return self._call_pdb
 
     def _set_call_pdb(self,val):
 
         if val not in (0,1,False,True):
             raise ValueError('new call_pdb value must be boolean')
 
         # store value in instance
         self._call_pdb = val
 
         # notify the actual exception handlers
         self.InteractiveTB.call_pdb = val
 
     call_pdb = property(_get_call_pdb,_set_call_pdb,None,
                         'Control auto-activation of pdb at exceptions')
 
     def debugger(self,force=False):
         """Call the pdb debugger.
 
         Keywords:
 
           - force(False): by default, this routine checks the instance call_pdb
             flag and does not actually invoke the debugger if the flag is false.
             The 'force' option forces the debugger to activate even if the flag
             is false.
         """
 
         if not (force or self.call_pdb):
             return
 
         if not hasattr(sys,'last_traceback'):
             error('No traceback has been produced, nothing to debug.')
             return
 
         self.InteractiveTB.debugger(force=True)
 
     #-------------------------------------------------------------------------
     # Things related to IPython's various namespaces
     #-------------------------------------------------------------------------
     default_user_namespaces = True
 
     def init_create_namespaces(self, user_module=None, user_ns=None):
         # Create the namespace where the user will operate.  user_ns is
         # normally the only one used, and it is passed to the exec calls as
         # the locals argument.  But we do carry a user_global_ns namespace
         # given as the exec 'globals' argument,  This is useful in embedding
         # situations where the ipython shell opens in a context where the
         # distinction between locals and globals is meaningful.  For
         # non-embedded contexts, it is just the same object as the user_ns dict.
 
         # FIXME. For some strange reason, __builtins__ is showing up at user
         # level as a dict instead of a module. This is a manual fix, but I
         # should really track down where the problem is coming from. Alex
         # Schmolck reported this problem first.
 
         # A useful post by Alex Martelli on this topic:
         # Re: inconsistent value from __builtins__
         # Von: Alex Martelli <[e-mail]>
         # Datum: Freitag 01 Oktober 2004 04:45:34 nachmittags/abends
         # Gruppen: comp.lang.python
 
         # Michael Hohn <[e-mail]> wrote:
         # > >>> print type(builtin_check.get_global_binding('__builtins__'))
         # > <type 'dict'>
         # > >>> print type(__builtins__)
         # > <type 'module'>
         # > Is this difference in return value intentional?
 
         # Well, it's documented that '__builtins__' can be either a dictionary
         # or a module, and it's been that way for a long time. Whether it's
         # intentional (or sensible), I don't know. In any case, the idea is
         # that if you need to access the built-in namespace directly, you
         # should start with "import __builtin__" (note, no 's') which will
         # definitely give you a module. Yeah, it's somewhat confusing:-(.
 
         # These routines return a properly built module and dict as needed by
         # the rest of the code, and can also be used by extension writers to
         # generate properly initialized namespaces.
         if (user_ns is not None) or (user_module is not None):
             self.default_user_namespaces = False
         self.user_module, self.user_ns = self.prepare_user_module(user_module, user_ns)
 
         # A record of hidden variables we have added to the user namespace, so
         # we can list later only variables defined in actual interactive use.
         self.user_ns_hidden = {}
 
         # Now that FakeModule produces a real module, we've run into a nasty
         # problem: after script execution (via %run), the module where the user
         # code ran is deleted.  Now that this object is a true module (needed
         # so doctest and other tools work correctly), the Python module
         # teardown mechanism runs over it, and sets to None every variable
         # present in that module.  Top-level references to objects from the
         # script survive, because the user_ns is updated with them.  However,
         # calling functions defined in the script that use other things from
         # the script will fail, because the function's closure had references
         # to the original objects, which are now all None.  So we must protect
         # these modules from deletion by keeping a cache.
         #
         # To avoid keeping stale modules around (we only need the one from the
         # last run), we use a dict keyed with the full path to the script, so
         # only the last version of the module is held in the cache.  Note,
         # however, that we must cache the module *namespace contents* (their
         # __dict__).  Because if we try to cache the actual modules, old ones
         # (uncached) could be destroyed while still holding references (such as
         # those held by GUI objects that tend to be long-lived)>
         #
         # The %reset command will flush this cache.  See the cache_main_mod()
         # and clear_main_mod_cache() methods for details on use.
 
         # This is the cache used for 'main' namespaces
         self._main_mod_cache = {}
 
         # A table holding all the namespaces IPython deals with, so that
         # introspection facilities can search easily.
         self.ns_table = {'user_global':self.user_module.__dict__,
                          'user_local':self.user_ns,
                          'builtin':builtin_mod.__dict__
                          }
     
     @property
     def user_global_ns(self):
         return self.user_module.__dict__
 
     def prepare_user_module(self, user_module=None, user_ns=None):
         """Prepare the module and namespace in which user code will be run.
         
         When IPython is started normally, both parameters are None: a new module
         is created automatically, and its __dict__ used as the namespace.
         
         If only user_module is provided, its __dict__ is used as the namespace.
         If only user_ns is provided, a dummy module is created, and user_ns
         becomes the global namespace. If both are provided (as they may be
         when embedding), user_ns is the local namespace, and user_module
         provides the global namespace.
 
         Parameters
         ----------
         user_module : module, optional
             The current user module in which IPython is being run. If None,
             a clean module will be created.
         user_ns : dict, optional
             A namespace in which to run interactive commands.
 
         Returns
         -------
         A tuple of user_module and user_ns, each properly initialised.
         """
         if user_module is None and user_ns is not None:
             user_ns.setdefault("__name__", "__main__")
             user_module = DummyMod()
             user_module.__dict__ = user_ns
             
         if user_module is None:
             user_module = types.ModuleType("__main__",
                 doc="Automatically created module for IPython interactive environment")
         
         # We must ensure that __builtin__ (without the final 's') is always
         # available and pointing to the __builtin__ *module*.  For more details:
         # http://mail.python.org/pipermail/python-dev/2001-April/014068.html
         user_module.__dict__.setdefault('__builtin__', builtin_mod)
         user_module.__dict__.setdefault('__builtins__', builtin_mod)
         
         if user_ns is None:
             user_ns = user_module.__dict__
 
         return user_module, user_ns
 
     def init_sys_modules(self):
         # We need to insert into sys.modules something that looks like a
         # module but which accesses the IPython namespace, for shelve and
         # pickle to work interactively. Normally they rely on getting
         # everything out of __main__, but for embedding purposes each IPython
         # instance has its own private namespace, so we can't go shoving
         # everything into __main__.
 
         # note, however, that we should only do this for non-embedded
         # ipythons, which really mimic the __main__.__dict__ with their own
         # namespace.  Embedded instances, on the other hand, should not do
         # this because they need to manage the user local/global namespaces
         # only, but they live within a 'normal' __main__ (meaning, they
         # shouldn't overtake the execution environment of the script they're
         # embedded in).
 
         # This is overridden in the InteractiveShellEmbed subclass to a no-op.
         main_name = self.user_module.__name__
         sys.modules[main_name] = self.user_module
 
     def init_user_ns(self):
         """Initialize all user-visible namespaces to their minimum defaults.
 
         Certain history lists are also initialized here, as they effectively
         act as user namespaces.
 
         Notes
         -----
         All data structures here are only filled in, they are NOT reset by this
         method.  If they were not empty before, data will simply be added to
         them.
         """
         # This function works in two parts: first we put a few things in
         # user_ns, and we sync that contents into user_ns_hidden so that these
         # initial variables aren't shown by %who.  After the sync, we add the
         # rest of what we *do* want the user to see with %who even on a new
         # session (probably nothing, so they really only see their own stuff)
 
         # The user dict must *always* have a __builtin__ reference to the
         # Python standard __builtin__ namespace,  which must be imported.
         # This is so that certain operations in prompt evaluation can be
         # reliably executed with builtins.  Note that we can NOT use
         # __builtins__ (note the 's'),  because that can either be a dict or a
         # module, and can even mutate at runtime, depending on the context
         # (Python makes no guarantees on it).  In contrast, __builtin__ is
         # always a module object, though it must be explicitly imported.
 
         # For more details:
         # http://mail.python.org/pipermail/python-dev/2001-April/014068.html
         ns = {}
         
         # make global variables for user access to the histories
         ns['_ih'] = self.history_manager.input_hist_parsed
         ns['_oh'] = self.history_manager.output_hist
         ns['_dh'] = self.history_manager.dir_hist
 
         # user aliases to input and output histories.  These shouldn't show up
         # in %who, as they can have very large reprs.
         ns['In']  = self.history_manager.input_hist_parsed
         ns['Out'] = self.history_manager.output_hist
 
         # Store myself as the public api!!!
         ns['get_ipython'] = self.get_ipython
         
         ns['exit'] = self.exiter
         ns['quit'] = self.exiter
 
         # Sync what we've added so far to user_ns_hidden so these aren't seen
         # by %who
         self.user_ns_hidden.update(ns)
 
         # Anything put into ns now would show up in %who.  Think twice before
         # putting anything here, as we really want %who to show the user their
         # stuff, not our variables.
 
         # Finally, update the real user's namespace
         self.user_ns.update(ns)
     
     @property
     def all_ns_refs(self):
         """Get a list of references to all the namespace dictionaries in which
         IPython might store a user-created object.
         
         Note that this does not include the displayhook, which also caches
         objects from the output."""
         return [self.user_ns, self.user_global_ns, self.user_ns_hidden] + \
                [m.__dict__ for m in self._main_mod_cache.values()]
 
     def reset(self, new_session=True):
         """Clear all internal namespaces, and attempt to release references to
         user objects.
 
         If new_session is True, a new history session will be opened.
         """
         # Clear histories
         self.history_manager.reset(new_session)
         # Reset counter used to index all histories
         if new_session:
             self.execution_count = 1
 
         # Reset last execution result
         self.last_execution_succeeded = True
         self.last_execution_result = None
         
         # Flush cached output items
         if self.displayhook.do_full_cache:
             self.displayhook.flush()
 
         # The main execution namespaces must be cleared very carefully,
         # skipping the deletion of the builtin-related keys, because doing so
         # would cause errors in many object's __del__ methods.
         if self.user_ns is not self.user_global_ns:
             self.user_ns.clear()
         ns = self.user_global_ns
         drop_keys = set(ns.keys())
         drop_keys.discard('__builtin__')
         drop_keys.discard('__builtins__')
         drop_keys.discard('__name__')
         for k in drop_keys:
             del ns[k]
         
         self.user_ns_hidden.clear()
         
         # Restore the user namespaces to minimal usability
         self.init_user_ns()
 
         # Restore the default and user aliases
         self.alias_manager.clear_aliases()
         self.alias_manager.init_aliases()
 
         # Flush the private list of module references kept for script
         # execution protection
         self.clear_main_mod_cache()
 
     def del_var(self, varname, by_name=False):
         """Delete a variable from the various namespaces, so that, as
         far as possible, we're not keeping any hidden references to it.
 
         Parameters
         ----------
         varname : str
             The name of the variable to delete.
         by_name : bool
             If True, delete variables with the given name in each
             namespace. If False (default), find the variable in the user
             namespace, and delete references to it.
         """
         if varname in ('__builtin__', '__builtins__'):
             raise ValueError("Refusing to delete %s" % varname)
 
         ns_refs = self.all_ns_refs
         
         if by_name:                    # Delete by name
             for ns in ns_refs:
                 try:
                     del ns[varname]
                 except KeyError:
                     pass
         else:                         # Delete by object
             try:
                 obj = self.user_ns[varname]
             except KeyError:
                 raise NameError("name '%s' is not defined" % varname)
             # Also check in output history
             ns_refs.append(self.history_manager.output_hist)
             for ns in ns_refs:
                 to_delete = [n for n, o in ns.items() if o is obj]
                 for name in to_delete:
                     del ns[name]
 
             # Ensure it is removed from the last execution result
             if self.last_execution_result.result is obj:
                 self.last_execution_result = None
 
             # displayhook keeps extra references, but not in a dictionary
             for name in ('_', '__', '___'):
                 if getattr(self.displayhook, name) is obj:
                     setattr(self.displayhook, name, None)
 
     def reset_selective(self, regex=None):
         """Clear selective variables from internal namespaces based on a
         specified regular expression.
 
         Parameters
         ----------
         regex : string or compiled pattern, optional
             A regular expression pattern that will be used in searching
             variable names in the users namespaces.
         """
         if regex is not None:
             try:
                 m = re.compile(regex)
             except TypeError:
                 raise TypeError('regex must be a string or compiled pattern')
             # Search for keys in each namespace that match the given regex
             # If a match is found, delete the key/value pair.
             for ns in self.all_ns_refs:
                 for var in ns:
                     if m.search(var):
                         del ns[var]
 
     def push(self, variables, interactive=True):
         """Inject a group of variables into the IPython user namespace.
 
         Parameters
         ----------
         variables : dict, str or list/tuple of str
             The variables to inject into the user's namespace.  If a dict, a
             simple update is done.  If a str, the string is assumed to have
             variable names separated by spaces.  A list/tuple of str can also
             be used to give the variable names.  If just the variable names are
             give (list/tuple/str) then the variable values looked up in the
             callers frame.
         interactive : bool
             If True (default), the variables will be listed with the ``who``
             magic.
         """
         vdict = None
 
         # We need a dict of name/value pairs to do namespace updates.
         if isinstance(variables, dict):
             vdict = variables
         elif isinstance(variables, (str, list, tuple)):
             if isinstance(variables, str):
                 vlist = variables.split()
             else:
                 vlist = variables
             vdict = {}
             cf = sys._getframe(1)
             for name in vlist:
                 try:
                     vdict[name] = eval(name, cf.f_globals, cf.f_locals)
                 except:
                     print('Could not get variable %s from %s' %
                            (name,cf.f_code.co_name))
         else:
             raise ValueError('variables must be a dict/str/list/tuple')
 
         # Propagate variables to user namespace
         self.user_ns.update(vdict)
 
         # And configure interactive visibility
         user_ns_hidden = self.user_ns_hidden
         if interactive:
             for name in vdict:
                 user_ns_hidden.pop(name, None)
         else:
             user_ns_hidden.update(vdict)
 
     def drop_by_id(self, variables):
         """Remove a dict of variables from the user namespace, if they are the
         same as the values in the dictionary.
         
         This is intended for use by extensions: variables that they've added can
         be taken back out if they are unloaded, without removing any that the
         user has overwritten.
         
         Parameters
         ----------
         variables : dict
           A dictionary mapping object names (as strings) to the objects.
         """
         for name, obj in variables.items():
             if name in self.user_ns and self.user_ns[name] is obj:
                 del self.user_ns[name]
                 self.user_ns_hidden.pop(name, None)
 
     #-------------------------------------------------------------------------
     # Things related to object introspection
     #-------------------------------------------------------------------------
 
     def _ofind(self, oname, namespaces=None):
         """Find an object in the available namespaces.
 
         self._ofind(oname) -> dict with keys: found,obj,ospace,ismagic
 
         Has special code to detect magic functions.
         """
         oname = oname.strip()
         if not oname.startswith(ESC_MAGIC) and \
                 not oname.startswith(ESC_MAGIC2) and \
                 not all(a.isidentifier() for a in oname.split(".")):
             return {'found': False}
 
         if namespaces is None:
             # Namespaces to search in:
             # Put them in a list. The order is important so that we
             # find things in the same order that Python finds them.
             namespaces = [ ('Interactive', self.user_ns),
                            ('Interactive (global)', self.user_global_ns),
                            ('Python builtin', builtin_mod.__dict__),
                            ]
 
         ismagic = False
         isalias = False
         found = False
         ospace = None
         parent = None
         obj = None
 
 
         # Look for the given name by splitting it in parts.  If the head is
         # found, then we look for all the remaining parts as members, and only
         # declare success if we can find them all.
         oname_parts = oname.split('.')
         oname_head, oname_rest = oname_parts[0],oname_parts[1:]
         for nsname,ns in namespaces:
             try:
                 obj = ns[oname_head]
             except KeyError:
                 continue
             else:
                 for idx, part in enumerate(oname_rest):
                     try:
                         parent = obj
                         # The last part is looked up in a special way to avoid
                         # descriptor invocation as it may raise or have side
                         # effects.
                         if idx == len(oname_rest) - 1:
                             obj = self._getattr_property(obj, part)
                         else:
                             obj = getattr(obj, part)
                     except:
                         # Blanket except b/c some badly implemented objects
                         # allow __getattr__ to raise exceptions other than
                         # AttributeError, which then crashes IPython.
                         break
                 else:
                     # If we finish the for loop (no break), we got all members
                     found = True
                     ospace = nsname
                     break  # namespace loop
 
         # Try to see if it's magic
         if not found:
             obj = None
             if oname.startswith(ESC_MAGIC2):
                 oname = oname.lstrip(ESC_MAGIC2)
                 obj = self.find_cell_magic(oname)
             elif oname.startswith(ESC_MAGIC):
                 oname = oname.lstrip(ESC_MAGIC)
                 obj = self.find_line_magic(oname)
             else:
                 # search without prefix, so run? will find %run?
                 obj = self.find_line_magic(oname)
                 if obj is None:
                     obj = self.find_cell_magic(oname)
             if obj is not None:
                 found = True
                 ospace = 'IPython internal'
                 ismagic = True
                 isalias = isinstance(obj, Alias)
 
         # Last try: special-case some literals like '', [], {}, etc:
         if not found and oname_head in ["''",'""','[]','{}','()']:
             obj = eval(oname_head)
             found = True
             ospace = 'Interactive'
 
         return {
                 'obj':obj,
                 'found':found,
                 'parent':parent,
                 'ismagic':ismagic,
                 'isalias':isalias,
                 'namespace':ospace
                }
 
     @staticmethod
     def _getattr_property(obj, attrname):
         """Property-aware getattr to use in object finding.
 
         If attrname represents a property, return it unevaluated (in case it has
         side effects or raises an error.
 
         """
         if not isinstance(obj, type):
             try:
                 # `getattr(type(obj), attrname)` is not guaranteed to return
                 # `obj`, but does so for property:
                 #
                 # property.__get__(self, None, cls) -> self
                 #
                 # The universal alternative is to traverse the mro manually
                 # searching for attrname in class dicts.
                 attr = getattr(type(obj), attrname)
             except AttributeError:
                 pass
             else:
                 # This relies on the fact that data descriptors (with both
                 # __get__ & __set__ magic methods) take precedence over
                 # instance-level attributes:
                 #
                 #    class A(object):
                 #        @property
                 #        def foobar(self): return 123
                 #    a = A()
                 #    a.__dict__['foobar'] = 345
                 #    a.foobar  # == 123
                 #
                 # So, a property may be returned right away.
                 if isinstance(attr, property):
                     return attr
 
         # Nothing helped, fall back.
         return getattr(obj, attrname)
 
     def _object_find(self, oname, namespaces=None):
         """Find an object and return a struct with info about it."""
         return Struct(self._ofind(oname, namespaces))
 
     def _inspect(self, meth, oname, namespaces=None, **kw):
         """Generic interface to the inspector system.
 
         This function is meant to be called by pdef, pdoc & friends.
         """
         info = self._object_find(oname, namespaces)
         docformat = sphinxify if self.sphinxify_docstring else None
         if info.found:
             pmethod = getattr(self.inspector, meth)
             # TODO: only apply format_screen to the plain/text repr of the mime
             # bundle.
             formatter = format_screen if info.ismagic else docformat
             if meth == 'pdoc':
                 pmethod(info.obj, oname, formatter)
             elif meth == 'pinfo':
                 pmethod(info.obj, oname, formatter, info, 
                         enable_html_pager=self.enable_html_pager, **kw)
             else:
                 pmethod(info.obj, oname)
         else:
             print('Object `%s` not found.' % oname)
             return 'not found'  # so callers can take other action
 
     def object_inspect(self, oname, detail_level=0):
         """Get object info about oname"""
         with self.builtin_trap:
             info = self._object_find(oname)
             if info.found:
                 return self.inspector.info(info.obj, oname, info=info,
                             detail_level=detail_level
                 )
             else:
                 return oinspect.object_info(name=oname, found=False)
 
     def object_inspect_text(self, oname, detail_level=0):
         """Get object info as formatted text"""
         return self.object_inspect_mime(oname, detail_level)['text/plain']
 
     def object_inspect_mime(self, oname, detail_level=0):
         """Get object info as a mimebundle of formatted representations.
 
         A mimebundle is a dictionary, keyed by mime-type.
         It must always have the key `'text/plain'`.
         """
         with self.builtin_trap:
             info = self._object_find(oname)
             if info.found:
                 return self.inspector._get_info(info.obj, oname, info=info,
                             detail_level=detail_level
                 )
             else:
                 raise KeyError(oname)
 
     #-------------------------------------------------------------------------
     # Things related to history management
     #-------------------------------------------------------------------------
 
     def init_history(self):
         """Sets up the command history, and starts regular autosaves."""
         self.history_manager = HistoryManager(shell=self, parent=self)
         self.configurables.append(self.history_manager)
 
     #-------------------------------------------------------------------------
     # Things related to exception handling and tracebacks (not debugging)
     #-------------------------------------------------------------------------
 
     debugger_cls = Pdb
 
     def init_traceback_handlers(self, custom_exceptions):
         # Syntax error handler.
         self.SyntaxTB = ultratb.SyntaxTB(color_scheme='NoColor', parent=self)
 
         # The interactive one is initialized with an offset, meaning we always
         # want to remove the topmost item in the traceback, which is our own
         # internal code. Valid modes: ['Plain','Context','Verbose']
         self.InteractiveTB = ultratb.AutoFormattedTB(mode = 'Plain',
                                                      color_scheme='NoColor',
                                                      tb_offset = 1,
                                    check_cache=check_linecache_ipython,
                                    debugger_cls=self.debugger_cls, parent=self)
 
         # The instance will store a pointer to the system-wide exception hook,
         # so that runtime code (such as magics) can access it.  This is because
         # during the read-eval loop, it may get temporarily overwritten.
         self.sys_excepthook = sys.excepthook
 
         # and add any custom exception handlers the user may have specified
         self.set_custom_exc(*custom_exceptions)
 
         # Set the exception mode
         self.InteractiveTB.set_mode(mode=self.xmode)
 
     def set_custom_exc(self, exc_tuple, handler):
         """set_custom_exc(exc_tuple, handler)
 
         Set a custom exception handler, which will be called if any of the
         exceptions in exc_tuple occur in the mainloop (specifically, in the
         run_code() method).
 
         Parameters
         ----------
 
         exc_tuple : tuple of exception classes
             A *tuple* of exception classes, for which to call the defined
             handler.  It is very important that you use a tuple, and NOT A
             LIST here, because of the way Python's except statement works.  If
             you only want to trap a single exception, use a singleton tuple::
 
                 exc_tuple == (MyCustomException,)
 
         handler : callable
             handler must have the following signature::
 
                 def my_handler(self, etype, value, tb, tb_offset=None):
                     ...
                     return structured_traceback
 
             Your handler must return a structured traceback (a list of strings),
             or None.
 
             This will be made into an instance method (via types.MethodType)
             of IPython itself, and it will be called if any of the exceptions
             listed in the exc_tuple are caught. If the handler is None, an
             internal basic one is used, which just prints basic info.
 
             To protect IPython from crashes, if your handler ever raises an
             exception or returns an invalid result, it will be immediately
             disabled.
 
         WARNING: by putting in your own exception handler into IPython's main
         execution loop, you run a very good chance of nasty crashes.  This
         facility should only be used if you really know what you are doing."""
         if not isinstance(exc_tuple, tuple):
             raise TypeError("The custom exceptions must be given as a tuple.")
 
         def dummy_handler(self, etype, value, tb, tb_offset=None):
             print('*** Simple custom exception handler ***')
             print('Exception type :', etype)
             print('Exception value:', value)
             print('Traceback      :', tb)
         
         def validate_stb(stb):
             """validate structured traceback return type
             
             return type of CustomTB *should* be a list of strings, but allow
             single strings or None, which are harmless.
             
             This function will *always* return a list of strings,
             and will raise a TypeError if stb is inappropriate.
             """
             msg = "CustomTB must return list of strings, not %r" % stb
             if stb is None:
                 return []
             elif isinstance(stb, str):
                 return [stb]
             elif not isinstance(stb, list):
                 raise TypeError(msg)
             # it's a list
             for line in stb:
                 # check every element
                 if not isinstance(line, str):
                     raise TypeError(msg)
             return stb
 
         if handler is None:
             wrapped = dummy_handler
         else:
             def wrapped(self,etype,value,tb,tb_offset=None):
                 """wrap CustomTB handler, to protect IPython from user code
                 
                 This makes it harder (but not impossible) for custom exception
                 handlers to crash IPython.
                 """
                 try:
                     stb = handler(self,etype,value,tb,tb_offset=tb_offset)
                     return validate_stb(stb)
                 except:
                     # clear custom handler immediately
                     self.set_custom_exc((), None)
                     print("Custom TB Handler failed, unregistering", file=sys.stderr)
                     # show the exception in handler first
                     stb = self.InteractiveTB.structured_traceback(*sys.exc_info())
                     print(self.InteractiveTB.stb2text(stb))
                     print("The original exception:")
                     stb = self.InteractiveTB.structured_traceback(
                                             (etype,value,tb), tb_offset=tb_offset
                     )
                 return stb
 
         self.CustomTB = types.MethodType(wrapped,self)
         self.custom_exceptions = exc_tuple
 
     def excepthook(self, etype, value, tb):
         """One more defense for GUI apps that call sys.excepthook.
 
         GUI frameworks like wxPython trap exceptions and call
         sys.excepthook themselves.  I guess this is a feature that
         enables them to keep running after exceptions that would
         otherwise kill their mainloop. This is a bother for IPython
         which excepts to catch all of the program exceptions with a try:
         except: statement.
 
         Normally, IPython sets sys.excepthook to a CrashHandler instance, so if
         any app directly invokes sys.excepthook, it will look to the user like
         IPython crashed.  In order to work around this, we can disable the
         CrashHandler and replace it with this excepthook instead, which prints a
         regular traceback using our InteractiveTB.  In this fashion, apps which
         call sys.excepthook will generate a regular-looking exception from
         IPython, and the CrashHandler will only be triggered by real IPython
         crashes.
 
         This hook should be used sparingly, only in places which are not likely
         to be true IPython errors.
         """
         self.showtraceback((etype, value, tb), tb_offset=0)
 
     def _get_exc_info(self, exc_tuple=None):
         """get exc_info from a given tuple, sys.exc_info() or sys.last_type etc.
         
         Ensures sys.last_type,value,traceback hold the exc_info we found,
         from whichever source.
         
         raises ValueError if none of these contain any information
         """
         if exc_tuple is None:
             etype, value, tb = sys.exc_info()
         else:
             etype, value, tb = exc_tuple
 
         if etype is None:
             if hasattr(sys, 'last_type'):
                 etype, value, tb = sys.last_type, sys.last_value, \
                                    sys.last_traceback
         
         if etype is None:
             raise ValueError("No exception to find")
         
         # Now store the exception info in sys.last_type etc.
         # WARNING: these variables are somewhat deprecated and not
         # necessarily safe to use in a threaded environment, but tools
         # like pdb depend on their existence, so let's set them.  If we
         # find problems in the field, we'll need to revisit their use.
         sys.last_type = etype
         sys.last_value = value
         sys.last_traceback = tb
         
         return etype, value, tb
     
     def show_usage_error(self, exc):
         """Show a short message for UsageErrors
         
         These are special exceptions that shouldn't show a traceback.
         """
         print("UsageError: %s" % exc, file=sys.stderr)
     
     def get_exception_only(self, exc_tuple=None):
         """
         Return as a string (ending with a newline) the exception that
         just occurred, without any traceback.
         """
         etype, value, tb = self._get_exc_info(exc_tuple)
         msg = traceback.format_exception_only(etype, value)
         return ''.join(msg)
 
     def showtraceback(self, exc_tuple=None, filename=None, tb_offset=None,
                       exception_only=False, running_compiled_code=False):
         """Display the exception that just occurred.
 
         If nothing is known about the exception, this is the method which
         should be used throughout the code for presenting user tracebacks,
         rather than directly invoking the InteractiveTB object.
 
         A specific showsyntaxerror() also exists, but this method can take
         care of calling it if needed, so unless you are explicitly catching a
         SyntaxError exception, don't try to analyze the stack manually and
         simply call this method."""
 
         try:
             try:
                 etype, value, tb = self._get_exc_info(exc_tuple)
             except ValueError:
                 print('No traceback available to show.', file=sys.stderr)
                 return
 
             if issubclass(etype, SyntaxError):
                 # Though this won't be called by syntax errors in the input
                 # line, there may be SyntaxError cases with imported code.
                 self.showsyntaxerror(filename, running_compiled_code)
             elif etype is UsageError:
                 self.show_usage_error(value)
             else:
                 if exception_only:
                     stb = ['An exception has occurred, use %tb to see '
                            'the full traceback.\n']
                     stb.extend(self.InteractiveTB.get_exception_only(etype,
                                                                      value))
                 else:
                     try:
                         # Exception classes can customise their traceback - we
                         # use this in IPython.parallel for exceptions occurring
                         # in the engines. This should return a list of strings.
                         stb = value._render_traceback_()
                     except Exception:
                         stb = self.InteractiveTB.structured_traceback(etype,
                                             value, tb, tb_offset=tb_offset)
 
                     self._showtraceback(etype, value, stb)
                     if self.call_pdb:
                         # drop into debugger
                         self.debugger(force=True)
                     return
 
                 # Actually show the traceback
                 self._showtraceback(etype, value, stb)
 
         except KeyboardInterrupt:
             print('\n' + self.get_exception_only(), file=sys.stderr)
 
     def _showtraceback(self, etype, evalue, stb):
         """Actually show a traceback.
 
         Subclasses may override this method to put the traceback on a different
         place, like a side channel.
         """
         print(self.InteractiveTB.stb2text(stb))
 
     def showsyntaxerror(self, filename=None, running_compiled_code=False):
         """Display the syntax error that just occurred.
 
         This doesn't display a stack trace because there isn't one.
 
         If a filename is given, it is stuffed in the exception instead
         of what was there before (because Python's parser always uses
         "<string>" when reading from a string).
 
         If the syntax error occurred when running a compiled code (i.e. running_compile_code=True),
         longer stack trace will be displayed.
          """
         etype, value, last_traceback = self._get_exc_info()
 
         if filename and issubclass(etype, SyntaxError):
             try:
                 value.filename = filename
             except:
                 # Not the format we expect; leave it alone
                 pass
 
         # If the error occurred when executing compiled code, we should provide full stacktrace.
         elist = traceback.extract_tb(last_traceback) if running_compiled_code else []
         stb = self.SyntaxTB.structured_traceback(etype, value, elist)
         self._showtraceback(etype, value, stb)
 
     # This is overridden in TerminalInteractiveShell to show a message about
     # the %paste magic.
     def showindentationerror(self):
         """Called by _run_cell when there's an IndentationError in code entered
         at the prompt.
 
         This is overridden in TerminalInteractiveShell to show a message about
         the %paste magic."""
         self.showsyntaxerror()
 
     #-------------------------------------------------------------------------
     # Things related to readline
     #-------------------------------------------------------------------------
 
     def init_readline(self):
         """DEPRECATED
         
         Moved to terminal subclass, here only to simplify the init logic."""
         # Set a number of methods that depend on readline to be no-op
         warnings.warn('`init_readline` is no-op since IPython 5.0 and is Deprecated',
                 DeprecationWarning, stacklevel=2)
         self.set_custom_completer = no_op
 
     @skip_doctest
     def set_next_input(self, s, replace=False):
         """ Sets the 'default' input string for the next command line.
 
         Example::
 
             In [1]: _ip.set_next_input("Hello Word")
             In [2]: Hello Word_  # cursor is here
         """
         self.rl_next_input = s
 
     def _indent_current_str(self):
         """return the current level of indentation as a string"""
         return self.input_splitter.get_indent_spaces() * ' '
 
     #-------------------------------------------------------------------------
     # Things related to text completion
     #-------------------------------------------------------------------------
 
     def init_completer(self):
         """Initialize the completion machinery.
 
         This creates completion machinery that can be used by client code,
         either interactively in-process (typically triggered by the readline
         library), programmatically (such as in test suites) or out-of-process
         (typically over the network by remote frontends).
         """
         from IPython.core.completer import IPCompleter
         from IPython.core.completerlib import (module_completer,
                 magic_run_completer, cd_completer, reset_completer)
 
         self.Completer = IPCompleter(shell=self,
                                      namespace=self.user_ns,
                                      global_namespace=self.user_global_ns,
                                      parent=self,
                                      )
         self.configurables.append(self.Completer)
 
         # Add custom completers to the basic ones built into IPCompleter
         sdisp = self.strdispatchers.get('complete_command', StrDispatch())
         self.strdispatchers['complete_command'] = sdisp
         self.Completer.custom_completers = sdisp
 
         self.set_hook('complete_command', module_completer, str_key = 'import')
         self.set_hook('complete_command', module_completer, str_key = 'from')
         self.set_hook('complete_command', module_completer, str_key = '%aimport')
         self.set_hook('complete_command', magic_run_completer, str_key = '%run')
         self.set_hook('complete_command', cd_completer, str_key = '%cd')
         self.set_hook('complete_command', reset_completer, str_key = '%reset')
 
     @skip_doctest
     def complete(self, text, line=None, cursor_pos=None):
         """Return the completed text and a list of completions.
 
         Parameters
         ----------
 
            text : string
              A string of text to be completed on.  It can be given as empty and
              instead a line/position pair are given.  In this case, the
              completer itself will split the line like readline does.
 
            line : string, optional
              The complete line that text is part of.
 
            cursor_pos : int, optional
              The position of the cursor on the input line.
 
         Returns
         -------
           text : string
             The actual text that was completed.
 
           matches : list
             A sorted list with all possible completions.
 
         The optional arguments allow the completion to take more context into
         account, and are part of the low-level completion API.
 
         This is a wrapper around the completion mechanism, similar to what
         readline does at the command line when the TAB key is hit.  By
         exposing it as a method, it can be used by other non-readline
         environments (such as GUIs) for text completion.
 
         Simple usage example:
 
         In [1]: x = 'hello'
 
         In [2]: _ip.complete('x.l')
         Out[2]: ('x.l', ['x.ljust', 'x.lower', 'x.lstrip'])
         """
 
         # Inject names into __builtin__ so we can complete on the added names.
         with self.builtin_trap:
             return self.Completer.complete(text, line, cursor_pos)
 
     def set_custom_completer(self, completer, pos=0):
         """Adds a new custom completer function.
 
         The position argument (defaults to 0) is the index in the completers
         list where you want the completer to be inserted."""
 
         newcomp = types.MethodType(completer,self.Completer)
         self.Completer.matchers.insert(pos,newcomp)
 
     def set_completer_frame(self, frame=None):
         """Set the frame of the completer."""
         if frame:
             self.Completer.namespace = frame.f_locals
             self.Completer.global_namespace = frame.f_globals
         else:
             self.Completer.namespace = self.user_ns
             self.Completer.global_namespace = self.user_global_ns
 
     #-------------------------------------------------------------------------
     # Things related to magics
     #-------------------------------------------------------------------------
 
     def init_magics(self):
         from IPython.core import magics as m
         self.magics_manager = magic.MagicsManager(shell=self,
                                    parent=self,
                                    user_magics=m.UserMagics(self))
         self.configurables.append(self.magics_manager)
 
         # Expose as public API from the magics manager
         self.register_magics = self.magics_manager.register
 
         self.register_magics(m.AutoMagics, m.BasicMagics, m.CodeMagics,
             m.ConfigMagics, m.DisplayMagics, m.ExecutionMagics,
             m.ExtensionMagics, m.HistoryMagics, m.LoggingMagics,
             m.NamespaceMagics, m.OSMagics, m.PylabMagics, m.ScriptMagics,
         )
         if sys.version_info >(3,5):
             self.register_magics(m.AsyncMagics)
 
         # Register Magic Aliases
         mman = self.magics_manager
         # FIXME: magic aliases should be defined by the Magics classes
         # or in MagicsManager, not here
         mman.register_alias('ed', 'edit')
         mman.register_alias('hist', 'history')
         mman.register_alias('rep', 'recall')
         mman.register_alias('SVG', 'svg', 'cell')
         mman.register_alias('HTML', 'html', 'cell')
         mman.register_alias('file', 'writefile', 'cell')
 
         # FIXME: Move the color initialization to the DisplayHook, which
         # should be split into a prompt manager and displayhook. We probably
         # even need a centralize colors management object.
         self.run_line_magic('colors', self.colors)
     
     # Defined here so that it's included in the documentation
     @functools.wraps(magic.MagicsManager.register_function)
     def register_magic_function(self, func, magic_kind='line', magic_name=None):
         self.magics_manager.register_function(func, 
                                   magic_kind=magic_kind, magic_name=magic_name)
 
     def run_line_magic(self, magic_name, line, _stack_depth=1):
         """Execute the given line magic.
 
         Parameters
         ----------
         magic_name : str
           Name of the desired magic function, without '%' prefix.
 
         line : str
           The rest of the input line as a single string.
           
         _stack_depth : int
           If run_line_magic() is called from magic() then _stack_depth=2.
           This is added to ensure backward compatibility for use of 'get_ipython().magic()'
         """
         fn = self.find_line_magic(magic_name)
         if fn is None:
             cm = self.find_cell_magic(magic_name)
             etpl = "Line magic function `%%%s` not found%s."
             extra = '' if cm is None else (' (But cell magic `%%%%%s` exists, '
                                     'did you mean that instead?)' % magic_name )
             raise UsageError(etpl % (magic_name, extra))
         else:
             # Note: this is the distance in the stack to the user's frame.
             # This will need to be updated if the internal calling logic gets
             # refactored, or else we'll be expanding the wrong variables.
             
             # Determine stack_depth depending on where run_line_magic() has been called
             stack_depth = _stack_depth
             magic_arg_s = self.var_expand(line, stack_depth)
             # Put magic args in a list so we can call with f(*a) syntax
             args = [magic_arg_s]
             kwargs = {}
             # Grab local namespace if we need it:
             if getattr(fn, "needs_local_scope", False):
                 kwargs['local_ns'] = sys._getframe(stack_depth).f_locals
             with self.builtin_trap:
                 result = fn(*args,**kwargs)
             return result
 
     def run_cell_magic(self, magic_name, line, cell):
         """Execute the given cell magic.
         
         Parameters
         ----------
         magic_name : str
           Name of the desired magic function, without '%' prefix.
 
         line : str
           The rest of the first input line as a single string.
 
         cell : str
           The body of the cell as a (possibly multiline) string.
         """
         fn = self.find_cell_magic(magic_name)
         if fn is None:
             lm = self.find_line_magic(magic_name)
             etpl = "Cell magic `%%{0}` not found{1}."
             extra = '' if lm is None else (' (But line magic `%{0}` exists, '
                             'did you mean that instead?)'.format(magic_name))
             raise UsageError(etpl.format(magic_name, extra))
         elif cell == '':
             message = '%%{0} is a cell magic, but the cell body is empty.'.format(magic_name)
             if self.find_line_magic(magic_name) is not None:
                 message += ' Did you mean the line magic %{0} (single %)?'.format(magic_name)
             raise UsageError(message)
         else:
             # Note: this is the distance in the stack to the user's frame.
             # This will need to be updated if the internal calling logic gets
             # refactored, or else we'll be expanding the wrong variables.
             stack_depth = 2
             magic_arg_s = self.var_expand(line, stack_depth)
             with self.builtin_trap:
                 result = fn(magic_arg_s, cell)
             return result
 
     def find_line_magic(self, magic_name):
         """Find and return a line magic by name.
 
         Returns None if the magic isn't found."""
         return self.magics_manager.magics['line'].get(magic_name)
 
     def find_cell_magic(self, magic_name):
         """Find and return a cell magic by name.
 
         Returns None if the magic isn't found."""
         return self.magics_manager.magics['cell'].get(magic_name)
 
     def find_magic(self, magic_name, magic_kind='line'):
         """Find and return a magic of the given type by name.
 
         Returns None if the magic isn't found."""
         return self.magics_manager.magics[magic_kind].get(magic_name)
 
     def magic(self, arg_s):
         """DEPRECATED. Use run_line_magic() instead.
 
         Call a magic function by name.
 
         Input: a string containing the name of the magic function to call and
         any additional arguments to be passed to the magic.
 
         magic('name -opt foo bar') is equivalent to typing at the ipython
         prompt:
 
         In[1]: %name -opt foo bar
 
         To call a magic without arguments, simply use magic('name').
 
         This provides a proper Python function to call IPython's magics in any
         valid Python code you can type at the interpreter, including loops and
         compound statements.
         """
         # TODO: should we issue a loud deprecation warning here?
         magic_name, _, magic_arg_s = arg_s.partition(' ')
         magic_name = magic_name.lstrip(prefilter.ESC_MAGIC)
         return self.run_line_magic(magic_name, magic_arg_s, _stack_depth=2)
 
     #-------------------------------------------------------------------------
     # Things related to macros
     #-------------------------------------------------------------------------
 
     def define_macro(self, name, themacro):
         """Define a new macro
 
         Parameters
         ----------
         name : str
             The name of the macro.
         themacro : str or Macro
             The action to do upon invoking the macro.  If a string, a new
             Macro object is created by passing the string to it.
         """
 
         from IPython.core import macro
 
         if isinstance(themacro, str):
             themacro = macro.Macro(themacro)
         if not isinstance(themacro, macro.Macro):
             raise ValueError('A macro must be a string or a Macro instance.')
         self.user_ns[name] = themacro
 
     #-------------------------------------------------------------------------
     # Things related to the running of system commands
     #-------------------------------------------------------------------------
 
     def system_piped(self, cmd):
         """Call the given cmd in a subprocess, piping stdout/err
 
         Parameters
         ----------
         cmd : str
           Command to execute (can not end in '&', as background processes are
           not supported.  Should not be a command that expects input
           other than simple text.
         """
         if cmd.rstrip().endswith('&'):
             # this is *far* from a rigorous test
             # We do not support backgrounding processes because we either use
             # pexpect or pipes to read from.  Users can always just call
             # os.system() or use ip.system=ip.system_raw
             # if they really want a background process.
             raise OSError("Background processes not supported.")
 
         # we explicitly do NOT return the subprocess status code, because
         # a non-None value would trigger :func:`sys.displayhook` calls.
         # Instead, we store the exit_code in user_ns.
         self.user_ns['_exit_code'] = system(self.var_expand(cmd, depth=1))
 
     def system_raw(self, cmd):
         """Call the given cmd in a subprocess using os.system on Windows or
         subprocess.call using the system shell on other platforms.
 
         Parameters
         ----------
         cmd : str
           Command to execute.
         """
         cmd = self.var_expand(cmd, depth=1)
         # protect os.system from UNC paths on Windows, which it can't handle:
         if sys.platform == 'win32':
             from IPython.utils._process_win32 import AvoidUNCPath
             with AvoidUNCPath() as path:
                 if path is not None:
                     cmd = '"pushd %s &&"%s' % (path, cmd)
                 try:
                     ec = os.system(cmd)
                 except KeyboardInterrupt:
                     print('\n' + self.get_exception_only(), file=sys.stderr)
                     ec = -2
         else:
             # For posix the result of the subprocess.call() below is an exit
             # code, which by convention is zero for success, positive for
             # program failure.  Exit codes above 128 are reserved for signals,
             # and the formula for converting a signal to an exit code is usually
             # signal_number+128.  To more easily differentiate between exit
             # codes and signals, ipython uses negative numbers.  For instance
             # since control-c is signal 2 but exit code 130, ipython's
             # _exit_code variable will read -2.  Note that some shells like
             # csh and fish don't follow sh/bash conventions for exit codes.
             executable = os.environ.get('SHELL', None)
             try:
                 # Use env shell instead of default /bin/sh
                 ec = subprocess.call(cmd, shell=True, executable=executable)
             except KeyboardInterrupt:
                 # intercept control-C; a long traceback is not useful here
                 print('\n' + self.get_exception_only(), file=sys.stderr)
                 ec = 130
             if ec > 128:
                 ec = -(ec - 128)
         
         # We explicitly do NOT return the subprocess status code, because
         # a non-None value would trigger :func:`sys.displayhook` calls.
         # Instead, we store the exit_code in user_ns.  Note the semantics
         # of _exit_code: for control-c, _exit_code == -signal.SIGNIT,
         # but raising SystemExit(_exit_code) will give status 254!
         self.user_ns['_exit_code'] = ec
 
     # use piped system by default, because it is better behaved
     system = system_piped
 
     def getoutput(self, cmd, split=True, depth=0):
         """Get output (possibly including stderr) from a subprocess.
 
         Parameters
         ----------
         cmd : str
           Command to execute (can not end in '&', as background processes are
           not supported.
         split : bool, optional
           If True, split the output into an IPython SList.  Otherwise, an
           IPython LSString is returned.  These are objects similar to normal
           lists and strings, with a few convenience attributes for easier
           manipulation of line-based output.  You can use '?' on them for
           details.
         depth : int, optional
           How many frames above the caller are the local variables which should
           be expanded in the command string? The default (0) assumes that the
           expansion variables are in the stack frame calling this function.
         """
         if cmd.rstrip().endswith('&'):
             # this is *far* from a rigorous test
             raise OSError("Background processes not supported.")
         out = getoutput(self.var_expand(cmd, depth=depth+1))
         if split:
             out = SList(out.splitlines())
         else:
             out = LSString(out)
         return out
 
     #-------------------------------------------------------------------------
     # Things related to aliases
     #-------------------------------------------------------------------------
 
     def init_alias(self):
         self.alias_manager = AliasManager(shell=self, parent=self)
         self.configurables.append(self.alias_manager)
 
     #-------------------------------------------------------------------------
     # Things related to extensions
     #-------------------------------------------------------------------------
 
     def init_extension_manager(self):
         self.extension_manager = ExtensionManager(shell=self, parent=self)
         self.configurables.append(self.extension_manager)
 
     #-------------------------------------------------------------------------
     # Things related to payloads
     #-------------------------------------------------------------------------
 
     def init_payload(self):
         self.payload_manager = PayloadManager(parent=self)
         self.configurables.append(self.payload_manager)
     
     #-------------------------------------------------------------------------
     # Things related to the prefilter
     #-------------------------------------------------------------------------
 
     def init_prefilter(self):
         self.prefilter_manager = PrefilterManager(shell=self, parent=self)
         self.configurables.append(self.prefilter_manager)
         # Ultimately this will be refactored in the new interpreter code, but
         # for now, we should expose the main prefilter method (there's legacy
         # code out there that may rely on this).
         self.prefilter = self.prefilter_manager.prefilter_lines
 
     def auto_rewrite_input(self, cmd):
         """Print to the screen the rewritten form of the user's command.
 
         This shows visual feedback by rewriting input lines that cause
         automatic calling to kick in, like::
 
           /f x
 
         into::
 
           ------> f(x)
 
         after the user's input prompt.  This helps the user understand that the
         input line was transformed automatically by IPython.
         """
         if not self.show_rewritten_input:
             return
 
         # This is overridden in TerminalInteractiveShell to use fancy prompts
         print("------> " + cmd)
 
     #-------------------------------------------------------------------------
     # Things related to extracting values/expressions from kernel and user_ns
     #-------------------------------------------------------------------------
 
     def _user_obj_error(self):
         """return simple exception dict
         
         for use in user_expressions
         """
         
         etype, evalue, tb = self._get_exc_info()
         stb = self.InteractiveTB.get_exception_only(etype, evalue)
         
         exc_info = {
             u'status' : 'error',
             u'traceback' : stb,
             u'ename' : etype.__name__,
             u'evalue' : py3compat.safe_unicode(evalue),
         }
 
         return exc_info
     
     def _format_user_obj(self, obj):
         """format a user object to display dict
         
         for use in user_expressions
         """
         
         data, md = self.display_formatter.format(obj)
         value = {
             'status' : 'ok',
             'data' : data,
             'metadata' : md,
         }
         return value
     
     def user_expressions(self, expressions):
         """Evaluate a dict of expressions in the user's namespace.
 
         Parameters
         ----------
         expressions : dict
           A dict with string keys and string values.  The expression values
           should be valid Python expressions, each of which will be evaluated
           in the user namespace.
 
         Returns
         -------
         A dict, keyed like the input expressions dict, with the rich mime-typed
         display_data of each value.
         """
         out = {}
         user_ns = self.user_ns
         global_ns = self.user_global_ns
         
         for key, expr in expressions.items():
             try:
                 value = self._format_user_obj(eval(expr, global_ns, user_ns))
             except:
                 value = self._user_obj_error()
             out[key] = value
         return out
 
     #-------------------------------------------------------------------------
     # Things related to the running of code
     #-------------------------------------------------------------------------
 
     def ex(self, cmd):
         """Execute a normal python statement in user namespace."""
         with self.builtin_trap:
             exec(cmd, self.user_global_ns, self.user_ns)
 
     def ev(self, expr):
         """Evaluate python expression expr in user namespace.
 
         Returns the result of evaluation
         """
         with self.builtin_trap:
             return eval(expr, self.user_global_ns, self.user_ns)
 
     def safe_execfile(self, fname, *where, exit_ignore=False, raise_exceptions=False, shell_futures=False):
         """A safe version of the builtin execfile().
 
         This version will never throw an exception, but instead print
         helpful error messages to the screen.  This only works on pure
         Python files with the .py extension.
 
         Parameters
         ----------
         fname : string
             The name of the file to be executed.
         where : tuple
             One or two namespaces, passed to execfile() as (globals,locals).
             If only one is given, it is passed as both.
         exit_ignore : bool (False)
             If True, then silence SystemExit for non-zero status (it is always
             silenced for zero status, as it is so common).
         raise_exceptions : bool (False)
             If True raise exceptions everywhere. Meant for testing.
         shell_futures : bool (False)
             If True, the code will share future statements with the interactive
             shell. It will both be affected by previous __future__ imports, and
             any __future__ imports in the code will affect the shell. If False,
             __future__ imports are not shared in either direction.
 
         """
         fname = os.path.abspath(os.path.expanduser(fname))
 
         # Make sure we can open the file
         try:
             with open(fname):
                 pass
         except:
             warn('Could not open file <%s> for safe execution.' % fname)
             return
 
         # Find things also in current directory.  This is needed to mimic the
         # behavior of running a script from the system command line, where
         # Python inserts the script's directory into sys.path
         dname = os.path.dirname(fname)
 
         with prepended_to_syspath(dname), self.builtin_trap:
             try:
                 glob, loc = (where + (None, ))[:2]
                 py3compat.execfile(
                     fname, glob, loc,
                     self.compile if shell_futures else None)
             except SystemExit as status:
                 # If the call was made with 0 or None exit status (sys.exit(0)
                 # or sys.exit() ), don't bother showing a traceback, as both of
                 # these are considered normal by the OS:
                 # > python -c'import sys;sys.exit(0)'; echo $?
                 # 0
                 # > python -c'import sys;sys.exit()'; echo $?
                 # 0
                 # For other exit status, we show the exception unless
                 # explicitly silenced, but only in short form.
                 if status.code:
                     if raise_exceptions:
                         raise
                     if not exit_ignore:
                         self.showtraceback(exception_only=True)
             except:
                 if raise_exceptions:
                     raise
                 # tb offset is 2 because we wrap execfile
                 self.showtraceback(tb_offset=2)
 
     def safe_execfile_ipy(self, fname, shell_futures=False, raise_exceptions=False):
         """Like safe_execfile, but for .ipy or .ipynb files with IPython syntax.
 
         Parameters
         ----------
         fname : str
             The name of the file to execute.  The filename must have a
             .ipy or .ipynb extension.
         shell_futures : bool (False)
             If True, the code will share future statements with the interactive
             shell. It will both be affected by previous __future__ imports, and
             any __future__ imports in the code will affect the shell. If False,
             __future__ imports are not shared in either direction.
         raise_exceptions : bool (False)
             If True raise exceptions everywhere.  Meant for testing.
         """
         fname = os.path.abspath(os.path.expanduser(fname))
 
         # Make sure we can open the file
         try:
             with open(fname):
                 pass
         except:
             warn('Could not open file <%s> for safe execution.' % fname)
             return
 
         # Find things also in current directory.  This is needed to mimic the
         # behavior of running a script from the system command line, where
         # Python inserts the script's directory into sys.path
         dname = os.path.dirname(fname)
         
         def get_cells():
             """generator for sequence of code blocks to run"""
             if fname.endswith('.ipynb'):
                 from nbformat import read
                 nb = read(fname, as_version=4)
                 if not nb.cells:
                     return
                 for cell in nb.cells:
                     if cell.cell_type == 'code':
                         yield cell.source
             else:
                 with open(fname) as f:
                     yield f.read()
 
         with prepended_to_syspath(dname):
             try:
                 for cell in get_cells():
                     result = self.run_cell(cell, silent=True, shell_futures=shell_futures)
                     if raise_exceptions:
                         result.raise_error()
                     elif not result.success:
                         break
             except:
                 if raise_exceptions:
                     raise
                 self.showtraceback()
                 warn('Unknown failure executing file: <%s>' % fname)
 
     def safe_run_module(self, mod_name, where):
         """A safe version of runpy.run_module().
 
         This version will never throw an exception, but instead print
         helpful error messages to the screen.
 
         `SystemExit` exceptions with status code 0 or None are ignored.
 
         Parameters
         ----------
         mod_name : string
             The name of the module to be executed.
         where : dict
             The globals namespace.
         """
         try:
             try:
                 where.update(
                     runpy.run_module(str(mod_name), run_name="__main__",
                                      alter_sys=True)
                             )
             except SystemExit as status:
                 if status.code:
                     raise
         except:
             self.showtraceback()
             warn('Unknown failure executing module: <%s>' % mod_name)
 
     def run_cell(self, raw_cell, store_history=False, silent=False, shell_futures=True):
         """Run a complete IPython cell.
 
         Parameters
         ----------
         raw_cell : str
           The code (including IPython code such as %magic functions) to run.
         store_history : bool
           If True, the raw and translated cell will be stored in IPython's
           history. For user code calling back into IPython's machinery, this
           should be set to False.
         silent : bool
           If True, avoid side-effects, such as implicit displayhooks and
           and logging.  silent=True forces store_history=False.
         shell_futures : bool
           If True, the code will share future statements with the interactive
           shell. It will both be affected by previous __future__ imports, and
           any __future__ imports in the code will affect the shell. If False,
           __future__ imports are not shared in either direction.
 
         Returns
         -------
         result : :class:`ExecutionResult`
         """
         result = None
         try:
             result = self._run_cell(
                 raw_cell, store_history, silent, shell_futures)
         finally:
             self.events.trigger('post_execute')
             if not silent:
                 self.events.trigger('post_run_cell', result)
         return result
 
     def _run_cell(self, raw_cell:str, store_history:bool, silent:bool, shell_futures:bool):
         """Internal method to run a complete IPython cell."""
         coro = self.run_cell_async(
             raw_cell,
             store_history=store_history,
             silent=silent,
             shell_futures=shell_futures,
         )
 
         # run_cell_async is async, but may not actually need an eventloop.
         # when this is the case, we want to run it using the pseudo_sync_runner
         # so that code can invoke eventloops (for example via the %run , and
         # `%paste` magic.
         if self.should_run_async(raw_cell):
             runner = self.loop_runner
         else:
             runner = _pseudo_sync_runner
 
         try:
             return runner(coro)
         except BaseException as e:
             info = ExecutionInfo(raw_cell, store_history, silent, shell_futures)
             result = ExecutionResult(info)
             result.error_in_exec = e
             self.showtraceback(running_compiled_code=True)
             return result
         return
 
     def should_run_async(self, raw_cell: str) -> bool:
         """Return whether a cell should be run asynchronously via a coroutine runner
 
         Parameters
         ----------
         raw_cell: str
             The code to be executed
 
         Returns
         -------
         result: bool
             Whether the code needs to be run with a coroutine runner or not
 
         .. versionadded: 7.0
         """
         if not self.autoawait:
             return False
         try:
             cell = self.transform_cell(raw_cell)
         except Exception:
             # any exception during transform will be raised
             # prior to execution
             return False
         return _should_be_async(cell)
 
     @asyncio.coroutine
     def run_cell_async(self, raw_cell: str, store_history=False, silent=False, shell_futures=True) -> ExecutionResult:
         """Run a complete IPython cell asynchronously.
 
         Parameters
         ----------
         raw_cell : str
           The code (including IPython code such as %magic functions) to run.
         store_history : bool
           If True, the raw and translated cell will be stored in IPython's
           history. For user code calling back into IPython's machinery, this
           should be set to False.
         silent : bool
           If True, avoid side-effects, such as implicit displayhooks and
           and logging.  silent=True forces store_history=False.
         shell_futures : bool
           If True, the code will share future statements with the interactive
           shell. It will both be affected by previous __future__ imports, and
           any __future__ imports in the code will affect the shell. If False,
           __future__ imports are not shared in either direction.
 
         Returns
         -------
         result : :class:`ExecutionResult`
 
         .. versionadded: 7.0
         """
         info = ExecutionInfo(
             raw_cell, store_history, silent, shell_futures)
         result = ExecutionResult(info)
 
         if (not raw_cell) or raw_cell.isspace():
             self.last_execution_succeeded = True
             self.last_execution_result = result
             return result
 
         if silent:
             store_history = False
 
         if store_history:
             result.execution_count = self.execution_count
 
         def error_before_exec(value):
             if store_history:
                 self.execution_count += 1
             result.error_before_exec = value
             self.last_execution_succeeded = False
             self.last_execution_result = result
             return result
 
         self.events.trigger('pre_execute')
         if not silent:
             self.events.trigger('pre_run_cell', info)
 
         # If any of our input transformation (input_transformer_manager or
         # prefilter_manager) raises an exception, we store it in this variable
         # so that we can display the error after logging the input and storing
         # it in the history.
         try:
             cell = self.transform_cell(raw_cell)
         except Exception:
             preprocessing_exc_tuple = sys.exc_info()
             cell = raw_cell  # cell has to exist so it can be stored/logged
         else:
             preprocessing_exc_tuple = None
 
         # Store raw and processed history
         if store_history:
             self.history_manager.store_inputs(self.execution_count,
                                               cell, raw_cell)
         if not silent:
             self.logger.log(cell, raw_cell)
 
         # Display the exception if input processing failed.
         if preprocessing_exc_tuple is not None:
             self.showtraceback(preprocessing_exc_tuple)
             if store_history:
                 self.execution_count += 1
             return error_before_exec(preprocessing_exc_tuple[2])
 
         # Our own compiler remembers the __future__ environment. If we want to
         # run code with a separate __future__ environment, use the default
         # compiler
         compiler = self.compile if shell_futures else CachingCompiler()
 
         _run_async = False
 
         with self.builtin_trap:
             cell_name = self.compile.cache(cell, self.execution_count)
 
             with self.display_trap:
                 # Compile to bytecode
                 try:
                     if self.autoawait and _should_be_async(cell):
                         # the code AST below will not be user code: we wrap it
                         # in an `async def`. This will likely make some AST
                         # transformer below miss some transform opportunity and
                         # introduce a small coupling to run_code (in which we
                         # bake some assumptions of what _ast_asyncify returns.
                         # they are ways around (like grafting part of the ast
                         # later:
                         #    - Here, return code_ast.body[0].body[1:-1], as well
                         #    as last expression in  return statement which is
                         #    the user code part.
                         #    - Let it go through the AST transformers, and graft
                         #    - it back after the AST transform
                         # But that seem unreasonable, at least while we
                         # do not need it.
                         code_ast = _ast_asyncify(cell, 'async-def-wrapper')
                         _run_async = True
                     else:
                         code_ast = compiler.ast_parse(cell, filename=cell_name)
                 except self.custom_exceptions as e:
                     etype, value, tb = sys.exc_info()
                     self.CustomTB(etype, value, tb)
                     return error_before_exec(e)
                 except IndentationError as e:
                     self.showindentationerror()
                     return error_before_exec(e)
                 except (OverflowError, SyntaxError, ValueError, TypeError,
                         MemoryError) as e:
                     self.showsyntaxerror()
                     return error_before_exec(e)
 
                 # Apply AST transformations
                 try:
                     code_ast = self.transform_ast(code_ast)
                 except InputRejected as e:
                     self.showtraceback()
                     return error_before_exec(e)
 
                 # Give the displayhook a reference to our ExecutionResult so it
                 # can fill in the output value.
                 self.displayhook.exec_result = result
 
                 # Execute the user code
                 interactivity = "none" if silent else self.ast_node_interactivity
                 if _run_async:
                     interactivity = 'async'
 
                 has_raised = yield from self.run_ast_nodes(code_ast.body, cell_name,
                        interactivity=interactivity, compiler=compiler, result=result)
 
                 self.last_execution_succeeded = not has_raised
                 self.last_execution_result = result
 
                 # Reset this so later displayed values do not modify the
                 # ExecutionResult
                 self.displayhook.exec_result = None
 
         if store_history:
             # Write output to the database. Does nothing unless
             # history output logging is enabled.
             self.history_manager.store_output(self.execution_count)
             # Each cell is a *single* input, regardless of how many lines it has
             self.execution_count += 1
 
         return result
 
     def transform_cell(self, raw_cell):
         """Transform an input cell before parsing it.
 
         Static transformations, implemented in IPython.core.inputtransformer2,
         deal with things like ``%magic`` and ``!system`` commands.
         These run on all input.
         Dynamic transformations, for things like unescaped magics and the exit
         autocall, depend on the state of the interpreter.
         These only apply to single line inputs.
 
         These string-based transformations are followed by AST transformations;
         see :meth:`transform_ast`.
         """
         # Static input transformations
         cell = self.input_transformer_manager.transform_cell(raw_cell)
 
         if len(cell.splitlines()) == 1:
             # Dynamic transformations - only applied for single line commands
             with self.builtin_trap:
                 # use prefilter_lines to handle trailing newlines
                 # restore trailing newline for ast.parse
                 cell = self.prefilter_manager.prefilter_lines(cell) + '\n'
 
         lines = cell.splitlines(keepends=True)
         for transform in self.input_transformers_post:
             lines = transform(lines)
         cell = ''.join(lines)
 
         return cell
 
     def transform_ast(self, node):
         """Apply the AST transformations from self.ast_transformers
         
         Parameters
         ----------
         node : ast.Node
           The root node to be transformed. Typically called with the ast.Module
           produced by parsing user input.
         
         Returns
         -------
         An ast.Node corresponding to the node it was called with. Note that it
         may also modify the passed object, so don't rely on references to the
         original AST.
         """
         for transformer in self.ast_transformers:
             try:
                 node = transformer.visit(node)
             except InputRejected:
                 # User-supplied AST transformers can reject an input by raising
                 # an InputRejected.  Short-circuit in this case so that we
                 # don't unregister the transform.
                 raise
             except Exception:
                 warn("AST transformer %r threw an error. It will be unregistered." % transformer)
                 self.ast_transformers.remove(transformer)
 
         if self.ast_transformers:
             ast.fix_missing_locations(node)
         return node
 
     @asyncio.coroutine
     def run_ast_nodes(self, nodelist:ListType[AST], cell_name:str, interactivity='last_expr',
                         compiler=compile, result=None):
         """Run a sequence of AST nodes. The execution mode depends on the
         interactivity parameter.
 
         Parameters
         ----------
         nodelist : list
           A sequence of AST nodes to run.
         cell_name : str
           Will be passed to the compiler as the filename of the cell. Typically
           the value returned by ip.compile.cache(cell).
         interactivity : str
           'all', 'last', 'last_expr' , 'last_expr_or_assign' or 'none',
           specifying which nodes should be run interactively (displaying output
           from expressions). 'last_expr' will run the last node interactively
           only if it is an expression (i.e. expressions in loops or other blocks
           are not displayed) 'last_expr_or_assign' will run the last expression
           or the last assignment. Other values for this parameter will raise a
           ValueError.
 
           Experimental value: 'async' Will try to run top level interactive
           async/await code in default runner, this will not respect the
           interactivty setting and will only run the last node if it is an
           expression. 
 
         compiler : callable
           A function with the same interface as the built-in compile(), to turn
           the AST nodes into code objects. Default is the built-in compile().
         result : ExecutionResult, optional
           An object to store exceptions that occur during execution.
 
         Returns
         -------
         True if an exception occurred while running code, False if it finished
         running.
         """
         if not nodelist:
             return
         if interactivity == 'last_expr_or_assign':
             if isinstance(nodelist[-1], _assign_nodes):
                 asg = nodelist[-1]
                 if isinstance(asg, ast.Assign) and len(asg.targets) == 1:
                     target = asg.targets[0]
                 elif isinstance(asg, _single_targets_nodes):
                     target = asg.target
                 else:
                     target = None
                 if isinstance(target, ast.Name):
                     nnode = ast.Expr(ast.Name(target.id, ast.Load()))
                     ast.fix_missing_locations(nnode)
                     nodelist.append(nnode)
             interactivity = 'last_expr'
 
         _async = False
         if interactivity == 'last_expr':
             if isinstance(nodelist[-1], ast.Expr):
                 interactivity = "last"
             else:
                 interactivity = "none"
 
         if interactivity == 'none':
             to_run_exec, to_run_interactive = nodelist, []
         elif interactivity == 'last':
             to_run_exec, to_run_interactive = nodelist[:-1], nodelist[-1:]
         elif interactivity == 'all':
             to_run_exec, to_run_interactive = [], nodelist
         elif interactivity == 'async':
             _async = True
         else:
             raise ValueError("Interactivity was %r" % interactivity)
         try:
             if _async:
                 # If interactivity is async the semantics of run_code are
                 # completely different Skip usual machinery.
                 mod = ast.Module(nodelist)
                 async_wrapper_code = compiler(mod, 'cell_name', 'exec')
                 exec(async_wrapper_code, self.user_global_ns, self.user_ns)
                 async_code = removed_co_newlocals(self.user_ns.pop('async-def-wrapper')).__code__
                 if (yield from self.run_code(async_code, result, async_=True)):
                     return True
             else:
                 for i, node in enumerate(to_run_exec):
                     mod = ast.Module([node])
                     code = compiler(mod, cell_name, "exec")
                     if (yield from self.run_code(code, result)):
                         return True
 
                 for i, node in enumerate(to_run_interactive):
                     mod = ast.Interactive([node])
                     code = compiler(mod, cell_name, "single")
                     if (yield from self.run_code(code, result)):
                         return True
 
             # Flush softspace
             if softspace(sys.stdout, 0):
                 print()
 
         except:
             # It's possible to have exceptions raised here, typically by
             # compilation of odd code (such as a naked 'return' outside a
             # function) that did parse but isn't valid. Typically the exception
             # is a SyntaxError, but it's safest just to catch anything and show
             # the user a traceback.
 
             # We do only one try/except outside the loop to minimize the impact
             # on runtime, and also because if any node in the node list is
             # broken, we should stop execution completely.
             if result:
                 result.error_before_exec = sys.exc_info()[1]
             self.showtraceback()
             return True
 
         return False
 
     def _async_exec(self, code_obj: types.CodeType, user_ns: dict):
         """
         Evaluate an asynchronous code object using a code runner
 
         Fake asynchronous execution of code_object in a namespace via a proxy namespace.
 
         Returns coroutine object, which can be executed via async loop runner
 
         WARNING: The semantics of `async_exec` are quite different from `exec`,
         in particular you can only pass a single namespace. It also return a
         handle to the value of the last things returned by code_object.
         """
 
         return eval(code_obj, user_ns)
 
     @asyncio.coroutine
     def run_code(self, code_obj, result=None, *, async_=False):
         """Execute a code object.
 
         When an exception occurs, self.showtraceback() is called to display a
         traceback.
 
         Parameters
         ----------
         code_obj : code object
           A compiled code object, to be executed
         result : ExecutionResult, optional
           An object to store exceptions that occur during execution.
         async_ :  Bool (Experimental)
           Attempt to run top-level asynchronous code in a default loop.
 
         Returns
         -------
         False : successful execution.
         True : an error occurred.
         """
         # Set our own excepthook in case the user code tries to call it
         # directly, so that the IPython crash handler doesn't get triggered
         old_excepthook, sys.excepthook = sys.excepthook, self.excepthook
 
         # we save the original sys.excepthook in the instance, in case config
         # code (such as magics) needs access to it.
         self.sys_excepthook = old_excepthook
         outflag = True  # happens in more places, so it's easier as default
         try:
             try:
                 self.hooks.pre_run_code_hook()
                 if async_:
                     last_expr = (yield from self._async_exec(code_obj, self.user_ns))
                     code = compile('last_expr', 'fake', "single")
                     exec(code, {'last_expr': last_expr})
                 else:
                     exec(code_obj, self.user_global_ns, self.user_ns)
             finally:
                 # Reset our crash handler in place
                 sys.excepthook = old_excepthook
         except SystemExit as e:
             if result is not None:
                 result.error_in_exec = e
             self.showtraceback(exception_only=True)
             warn("To exit: use 'exit', 'quit', or Ctrl-D.", stacklevel=1)
         except self.custom_exceptions:
             etype, value, tb = sys.exc_info()
             if result is not None:
                 result.error_in_exec = value
             self.CustomTB(etype, value, tb)
         except:
             if result is not None:
                 result.error_in_exec = sys.exc_info()[1]
             self.showtraceback(running_compiled_code=True)
         else:
             outflag = False
         return outflag
 
     # For backwards compatibility
     runcode = run_code
 
-    def check_complete(self, code):
+    def check_complete(self, code: str) -> Tuple[str, str]:
         """Return whether a block of code is ready to execute, or should be continued
 
         Parameters
         ----------
         source : string
           Python input code, which can be multiline.
 
         Returns
         -------
         status : str
           One of 'complete', 'incomplete', or 'invalid' if source is not a
           prefix of valid code.
         indent : str
           When status is 'incomplete', this is some whitespace to insert on
           the next line of the prompt.
         """
         status, nspaces = self.input_transformer_manager.check_complete(code)
         return status, ' ' * (nspaces or 0)
 
     #-------------------------------------------------------------------------
     # Things related to GUI support and pylab
     #-------------------------------------------------------------------------
 
     active_eventloop = None
 
     def enable_gui(self, gui=None):
         raise NotImplementedError('Implement enable_gui in a subclass')
     
     def enable_matplotlib(self, gui=None):
         """Enable interactive matplotlib and inline figure support.
         
         This takes the following steps:
         
         1. select the appropriate eventloop and matplotlib backend
         2. set up matplotlib for interactive use with that backend
         3. configure formatters for inline figure display
         4. enable the selected gui eventloop
         
         Parameters
         ----------
         gui : optional, string
           If given, dictates the choice of matplotlib GUI backend to use
           (should be one of IPython's supported backends, 'qt', 'osx', 'tk',
           'gtk', 'wx' or 'inline'), otherwise we use the default chosen by
           matplotlib (as dictated by the matplotlib build-time options plus the
           user's matplotlibrc configuration file).  Note that not all backends
           make sense in all contexts, for example a terminal ipython can't
           display figures inline.
         """
         from IPython.core import pylabtools as pt
         gui, backend = pt.find_gui_and_backend(gui, self.pylab_gui_select)
     
         if gui != 'inline':
             # If we have our first gui selection, store it
             if self.pylab_gui_select is None:
                 self.pylab_gui_select = gui
             # Otherwise if they are different
             elif gui != self.pylab_gui_select:
                 print('Warning: Cannot change to a different GUI toolkit: %s.'
                         ' Using %s instead.' % (gui, self.pylab_gui_select))
                 gui, backend = pt.find_gui_and_backend(self.pylab_gui_select)
         
         pt.activate_matplotlib(backend)
         pt.configure_inline_support(self, backend)
         
         # Now we must activate the gui pylab wants to use, and fix %run to take
         # plot updates into account
         self.enable_gui(gui)
         self.magics_manager.registry['ExecutionMagics'].default_runner = \
             pt.mpl_runner(self.safe_execfile)
         
         return gui, backend
 
     def enable_pylab(self, gui=None, import_all=True, welcome_message=False):
         """Activate pylab support at runtime.
 
         This turns on support for matplotlib, preloads into the interactive
         namespace all of numpy and pylab, and configures IPython to correctly
         interact with the GUI event loop.  The GUI backend to be used can be
         optionally selected with the optional ``gui`` argument.
         
         This method only adds preloading the namespace to InteractiveShell.enable_matplotlib.
 
         Parameters
         ----------
         gui : optional, string
           If given, dictates the choice of matplotlib GUI backend to use
           (should be one of IPython's supported backends, 'qt', 'osx', 'tk',
           'gtk', 'wx' or 'inline'), otherwise we use the default chosen by
           matplotlib (as dictated by the matplotlib build-time options plus the
           user's matplotlibrc configuration file).  Note that not all backends
           make sense in all contexts, for example a terminal ipython can't
           display figures inline.
         import_all : optional, bool, default: True
           Whether to do `from numpy import *` and `from pylab import *`
           in addition to module imports.
         welcome_message : deprecated
           This argument is ignored, no welcome message will be displayed.
         """
         from IPython.core.pylabtools import import_pylab
         
         gui, backend = self.enable_matplotlib(gui)
         
         # We want to prevent the loading of pylab to pollute the user's
         # namespace as shown by the %who* magics, so we execute the activation
         # code in an empty namespace, and we update *both* user_ns and
         # user_ns_hidden with this information.
         ns = {}
         import_pylab(ns, import_all)
         # warn about clobbered names
         ignored = {"__builtins__"}
         both = set(ns).intersection(self.user_ns).difference(ignored)
         clobbered = [ name for name in both if self.user_ns[name] is not ns[name] ]
         self.user_ns.update(ns)
         self.user_ns_hidden.update(ns)
         return gui, backend, clobbered
 
     #-------------------------------------------------------------------------
     # Utilities
     #-------------------------------------------------------------------------
 
     def var_expand(self, cmd, depth=0, formatter=DollarFormatter()):
         """Expand python variables in a string.
 
         The depth argument indicates how many frames above the caller should
         be walked to look for the local namespace where to expand variables.
 
         The global namespace for expansion is always the user's interactive
         namespace.
         """
         ns = self.user_ns.copy()
         try:
             frame = sys._getframe(depth+1)
         except ValueError:
             # This is thrown if there aren't that many frames on the stack,
             # e.g. if a script called run_line_magic() directly.
             pass
         else:
             ns.update(frame.f_locals)
 
         try:
             # We have to use .vformat() here, because 'self' is a valid and common
             # name, and expanding **ns for .format() would make it collide with
             # the 'self' argument of the method.
             cmd = formatter.vformat(cmd, args=[], kwargs=ns)
         except Exception:
             # if formatter couldn't format, just let it go untransformed
             pass
         return cmd
 
     def mktempfile(self, data=None, prefix='ipython_edit_'):
         """Make a new tempfile and return its filename.
 
         This makes a call to tempfile.mkstemp (created in a tempfile.mkdtemp),
         but it registers the created filename internally so ipython cleans it up
         at exit time.
 
         Optional inputs:
 
           - data(None): if data is given, it gets written out to the temp file
             immediately, and the file is closed again."""
 
         dirname = tempfile.mkdtemp(prefix=prefix)
         self.tempdirs.append(dirname)
 
         handle, filename = tempfile.mkstemp('.py', prefix, dir=dirname)
         os.close(handle)  # On Windows, there can only be one open handle on a file
         self.tempfiles.append(filename)
 
         if data:
             tmp_file = open(filename,'w')
             tmp_file.write(data)
             tmp_file.close()
         return filename
 
     @undoc
     def write(self,data):
         """DEPRECATED: Write a string to the default output"""
         warn('InteractiveShell.write() is deprecated, use sys.stdout instead',
              DeprecationWarning, stacklevel=2)
         sys.stdout.write(data)
 
     @undoc
     def write_err(self,data):
         """DEPRECATED: Write a string to the default error output"""
         warn('InteractiveShell.write_err() is deprecated, use sys.stderr instead',
              DeprecationWarning, stacklevel=2)
         sys.stderr.write(data)
 
     def ask_yes_no(self, prompt, default=None, interrupt=None):
         if self.quiet:
             return True
         return ask_yes_no(prompt,default,interrupt)
 
     def show_usage(self):
         """Show a usage message"""
         page.page(IPython.core.usage.interactive_usage)
 
     def extract_input_lines(self, range_str, raw=False):
         """Return as a string a set of input history slices.
 
         Parameters
         ----------
         range_str : string
             The set of slices is given as a string, like "~5/6-~4/2 4:8 9",
             since this function is for use by magic functions which get their
             arguments as strings. The number before the / is the session
             number: ~n goes n back from the current session.
 
         raw : bool, optional
             By default, the processed input is used.  If this is true, the raw
             input history is used instead.
 
         Notes
         -----
 
         Slices can be described with two notations:
 
         * ``N:M`` -> standard python form, means including items N...(M-1).
         * ``N-M`` -> include items N..M (closed endpoint).
         """
         lines = self.history_manager.get_range_by_str(range_str, raw=raw)
         return "\n".join(x for _, _, x in lines)
 
     def find_user_code(self, target, raw=True, py_only=False, skip_encoding_cookie=True, search_ns=False):
         """Get a code string from history, file, url, or a string or macro.
 
         This is mainly used by magic functions.
 
         Parameters
         ----------
 
         target : str
 
           A string specifying code to retrieve. This will be tried respectively
           as: ranges of input history (see %history for syntax), url,
           corresponding .py file, filename, or an expression evaluating to a
           string or Macro in the user namespace.
 
         raw : bool
           If true (default), retrieve raw history. Has no effect on the other
           retrieval mechanisms.
 
         py_only : bool (default False)
           Only try to fetch python code, do not try alternative methods to decode file
           if unicode fails.
 
         Returns
         -------
         A string of code.
 
         ValueError is raised if nothing is found, and TypeError if it evaluates
         to an object of another type. In each case, .args[0] is a printable
         message.
         """
         code = self.extract_input_lines(target, raw=raw)  # Grab history
         if code:
             return code
         try:
             if target.startswith(('http://', 'https://')):
                 return openpy.read_py_url(target, skip_encoding_cookie=skip_encoding_cookie)
         except UnicodeDecodeError:
             if not py_only :
                 # Deferred import
                 from urllib.request import urlopen
                 response = urlopen(target)
                 return response.read().decode('latin1')
             raise ValueError(("'%s' seem to be unreadable.") % target)
 
         potential_target = [target]
         try :
             potential_target.insert(0,get_py_filename(target))
         except IOError:
             pass
 
         for tgt in potential_target :
             if os.path.isfile(tgt):                        # Read file
                 try :
                     return openpy.read_py_file(tgt, skip_encoding_cookie=skip_encoding_cookie)
                 except UnicodeDecodeError :
                     if not py_only :
                         with io_open(tgt,'r', encoding='latin1') as f :
                             return f.read()
                     raise ValueError(("'%s' seem to be unreadable.") % target)
             elif os.path.isdir(os.path.expanduser(tgt)):
                 raise ValueError("'%s' is a directory, not a regular file." % target)
 
         if search_ns:
             # Inspect namespace to load object source
             object_info = self.object_inspect(target, detail_level=1)
             if object_info['found'] and object_info['source']:
                 return object_info['source']
 
         try:                                              # User namespace
             codeobj = eval(target, self.user_ns)
         except Exception:
             raise ValueError(("'%s' was not found in history, as a file, url, "
                                 "nor in the user namespace.") % target)
 
         if isinstance(codeobj, str):
             return codeobj
         elif isinstance(codeobj, Macro):
             return codeobj.value
 
         raise TypeError("%s is neither a string nor a macro." % target,
                         codeobj)
 
     #-------------------------------------------------------------------------
     # Things related to IPython exiting
     #-------------------------------------------------------------------------
     def atexit_operations(self):
         """This will be executed at the time of exit.
 
         Cleanup operations and saving of persistent data that is done
         unconditionally by IPython should be performed here.
 
         For things that may depend on startup flags or platform specifics (such
         as having readline or not), register a separate atexit function in the
         code that has the appropriate information, rather than trying to
         clutter
         """
         # Close the history session (this stores the end time and line count)
         # this must be *before* the tempfile cleanup, in case of temporary
         # history db
         self.history_manager.end_session()
 
         # Cleanup all tempfiles and folders left around
         for tfile in self.tempfiles:
             try:
                 os.unlink(tfile)
             except OSError:
                 pass
 
         for tdir in self.tempdirs:
             try:
                 os.rmdir(tdir)
             except OSError:
                 pass
 
         # Clear all user namespaces to release all references cleanly.
         self.reset(new_session=False)
 
         # Run user hooks
         self.hooks.shutdown_hook()
 
     def cleanup(self):
         self.restore_sys_module_state()
 
 
     # Overridden in terminal subclass to change prompts
     def switch_doctest_mode(self, mode):
         pass
 
 
 class InteractiveShellABC(metaclass=abc.ABCMeta):
     """An abstract base class for InteractiveShell."""
 
 InteractiveShellABC.register(InteractiveShell)

IPython/sphinxext/ipython_directive.py

@@ -1,1170 +1,1237 b''
 # -*- coding: utf-8 -*-
 """
 Sphinx directive to support embedded IPython code.
 
+IPython provides an extension for `Sphinx <http://www.sphinx-doc.org/>`_ to
+highlight and run code.
+
 This directive allows pasting of entire interactive IPython sessions, prompts
 and all, and their code will actually get re-executed at doc build time, with
 all prompts renumbered sequentially. It also allows you to input code as a pure
 python input by giving the argument python to the directive. The output looks
 like an interactive ipython section.
 
+Here is an example of how the IPython directive can
+**run** python code, at build time.
+
+.. ipython::
+
+   In [1]: 1+1
+
+   In [1]: import datetime
+      ...: datetime.datetime.now()
+
+It supports IPython construct that plain
+Python does not understand (like magics):
+
+.. ipython::
+
+   In [0]: import time
+
+   In [0]: %timeit time.sleep(0.05)
+
+This will also support top-level async when using IPython 7.0+
+
+.. ipython::
+
+   In [2]: import asyncio
+      ...: print('before')
+      ...: await asyncio.sleep(1)
+      ...: print('after')
+
+
+The namespace will persist across multiple code chucks, Let's define a variable:
+
+.. ipython::
+
+   In [0]: who = "World"
+
+And now say hello:
+
+.. ipython::
+
+   In [0]: print('Hello,', who)
+
+If the current section raises an exception, you can add the ``:okexcept:`` flag
+to the current block, otherwise the build will fail.
+
+.. ipython::
+   :okexcept:
+
+   In [1]: 1/0
+
+IPython Sphinx directive module
+===============================
+
 To enable this directive, simply list it in your Sphinx ``conf.py`` file
 (making sure the directory where you placed it is visible to sphinx, as is
 needed for all Sphinx directives). For example, to enable syntax highlighting
 and the IPython directive::
 
     extensions = ['IPython.sphinxext.ipython_console_highlighting',
                   'IPython.sphinxext.ipython_directive']
 
 The IPython directive outputs code-blocks with the language 'ipython'. So
 if you do not have the syntax highlighting extension enabled as well, then
 all rendered code-blocks will be uncolored. By default this directive assumes
 that your prompts are unchanged IPython ones, but this can be customized.
 The configurable options that can be placed in conf.py are:
 
 ipython_savefig_dir:
     The directory in which to save the figures. This is relative to the
     Sphinx source directory. The default is `html_static_path`.
 ipython_rgxin:
     The compiled regular expression to denote the start of IPython input
-    lines. The default is re.compile('In \[(\d+)\]:\s?(.*)\s*'). You
+    lines. The default is ``re.compile('In \[(\d+)\]:\s?(.*)\s*')``. You
     shouldn't need to change this.
 ipython_rgxout:
     The compiled regular expression to denote the start of IPython output
-    lines. The default is re.compile('Out\[(\d+)\]:\s?(.*)\s*'). You
+    lines. The default is ``re.compile('Out\[(\d+)\]:\s?(.*)\s*')``. You
     shouldn't need to change this.
 ipython_promptin:
     The string to represent the IPython input prompt in the generated ReST.
-    The default is 'In [%d]:'. This expects that the line numbers are used
+    The default is ``'In [%d]:'``. This expects that the line numbers are used
     in the prompt.
 ipython_promptout:
     The string to represent the IPython prompt in the generated ReST. The
-    default is 'Out [%d]:'. This expects that the line numbers are used
+    default is ``'Out [%d]:'``. This expects that the line numbers are used
     in the prompt.
 ipython_mplbackend:
     The string which specifies if the embedded Sphinx shell should import
     Matplotlib and set the backend. The value specifies a backend that is
     passed to `matplotlib.use()` before any lines in `ipython_execlines` are
     executed. If not specified in conf.py, then the default value of 'agg' is
     used. To use the IPython directive without matplotlib as a dependency, set
     the value to `None`. It may end up that matplotlib is still imported
     if the user specifies so in `ipython_execlines` or makes use of the
     @savefig pseudo decorator.
 ipython_execlines:
     A list of strings to be exec'd in the embedded Sphinx shell. Typical
     usage is to make certain packages always available. Set this to an empty
     list if you wish to have no imports always available. If specified in
-    conf.py as `None`, then it has the effect of making no imports available.
+    ``conf.py`` as `None`, then it has the effect of making no imports available.
     If omitted from conf.py altogether, then the default value of
     ['import numpy as np', 'import matplotlib.pyplot as plt'] is used.
 ipython_holdcount
     When the @suppress pseudo-decorator is used, the execution count can be
     incremented or not. The default behavior is to hold the execution count,
     corresponding to a value of `True`. Set this to `False` to increment
     the execution count after each suppressed command.
 
 As an example, to use the IPython directive when `matplotlib` is not available,
 one sets the backend to `None`::
 
     ipython_mplbackend = None
 
 An example usage of the directive is:
 
 .. code-block:: rst
 
     .. ipython::
 
         In [1]: x = 1
 
         In [2]: y = x**2
 
         In [3]: print(y)
 
 See http://matplotlib.org/sampledoc/ipython_directive.html for additional
 documentation.
 
 Pseudo-Decorators
 =================
 
 Note: Only one decorator is supported per input. If more than one decorator
 is specified, then only the last one is used.
 
 In addition to the Pseudo-Decorators/options described at the above link,
 several enhancements have been made. The directive will emit a message to the
 console at build-time if code-execution resulted in an exception or warning.
 You can suppress these on a per-block basis by specifying the :okexcept:
 or :okwarning: options:
 
 .. code-block:: rst
 
     .. ipython::
         :okexcept:
         :okwarning:
 
         In [1]: 1/0
         In [2]: # raise warning.
 
 To Do
------
+=====
 
 - Turn the ad-hoc test() function into a real test suite.
 - Break up ipython-specific functionality from matplotlib stuff into better
   separated code.
 
-Authors
--------
-
-- John D Hunter: original author.
-- Fernando Perez: refactoring, documentation, cleanups, port to 0.11.
-- VáclavŠmilauer <eudoxos-AT-arcig.cz>: Prompt generalizations.
-- Skipper Seabold, refactoring, cleanups, pure python addition
 """
 
+# Authors
+# =======
+# 
+# - John D Hunter: original author.
+# - Fernando Perez: refactoring, documentation, cleanups, port to 0.11.
+# - VáclavŠmilauer <eudoxos-AT-arcig.cz>: Prompt generalizations.
+# - Skipper Seabold, refactoring, cleanups, pure python addition
+
 #-----------------------------------------------------------------------------
 # Imports
 #-----------------------------------------------------------------------------
 
 # Stdlib
 import atexit
 import errno
 import os
 import re
 import sys
 import tempfile
 import ast
 import warnings
 import shutil
 from io import StringIO
 
 # Third-party
 from docutils.parsers.rst import directives
 from docutils.parsers.rst import Directive
 
 # Our own
 from traitlets.config import Config
 from IPython import InteractiveShell
 from IPython.core.profiledir import ProfileDir
 
+
+use_matpltolib = False
+try:
+    import matplotlib
+    use_matpltolib = True
+except Exception:
+    pass
+
 #-----------------------------------------------------------------------------
 # Globals
 #-----------------------------------------------------------------------------
 # for tokenizing blocks
 COMMENT, INPUT, OUTPUT =  range(3)
 
 #-----------------------------------------------------------------------------
 # Functions and class declarations
 #-----------------------------------------------------------------------------
 
 def block_parser(part, rgxin, rgxout, fmtin, fmtout):
     """
     part is a string of ipython text, comprised of at most one
     input, one output, comments, and blank lines.  The block parser
     parses the text into a list of::
 
       blocks = [ (TOKEN0, data0), (TOKEN1, data1), ...]
 
     where TOKEN is one of [COMMENT | INPUT | OUTPUT ] and
     data is, depending on the type of token::
 
       COMMENT : the comment string
 
       INPUT: the (DECORATOR, INPUT_LINE, REST) where
          DECORATOR: the input decorator (or None)
          INPUT_LINE: the input as string (possibly multi-line)
          REST : any stdout generated by the input line (not OUTPUT)
 
       OUTPUT: the output string, possibly multi-line
 
     """
     block = []
     lines = part.split('\n')
     N = len(lines)
     i = 0
     decorator = None
     while 1:
 
         if i==N:
             # nothing left to parse -- the last line
             break
 
         line = lines[i]
         i += 1
         line_stripped = line.strip()
         if line_stripped.startswith('#'):
             block.append((COMMENT, line))
             continue
 
         if line_stripped.startswith('@'):
             # Here is where we assume there is, at most, one decorator.
             # Might need to rethink this.
             decorator = line_stripped
             continue
 
         # does this look like an input line?
         matchin = rgxin.match(line)
         if matchin:
             lineno, inputline = int(matchin.group(1)), matchin.group(2)
 
             # the ....: continuation string
             continuation = '   %s:'%''.join(['.']*(len(str(lineno))+2))
             Nc = len(continuation)
             # input lines can continue on for more than one line, if
             # we have a '\' line continuation char or a function call
             # echo line 'print'.  The input line can only be
             # terminated by the end of the block or an output line, so
             # we parse out the rest of the input line if it is
             # multiline as well as any echo text
 
             rest = []
             while i<N:
 
                 # look ahead; if the next line is blank, or a comment, or
                 # an output line, we're done
 
                 nextline = lines[i]
                 matchout = rgxout.match(nextline)
                 #print "nextline=%s, continuation=%s, starts=%s"%(nextline, continuation, nextline.startswith(continuation))
                 if matchout or nextline.startswith('#'):
                     break
                 elif nextline.startswith(continuation):
                     # The default ipython_rgx* treat the space following the colon as optional.
                     # However, If the space is there we must consume it or code
                     # employing the cython_magic extension will fail to execute.
                     #
                     # This works with the default ipython_rgx* patterns,
                     # If you modify them, YMMV.
                     nextline = nextline[Nc:]
                     if nextline and nextline[0] == ' ':
                         nextline = nextline[1:]
 
                     inputline += '\n' +  nextline
                 else:
                     rest.append(nextline)
                 i+= 1
 
             block.append((INPUT, (decorator, inputline, '\n'.join(rest))))
             continue
 
         # if it looks like an output line grab all the text to the end
         # of the block
         matchout = rgxout.match(line)
         if matchout:
             lineno, output = int(matchout.group(1)), matchout.group(2)
             if i<N-1:
                 output = '\n'.join([output] + lines[i:])
 
             block.append((OUTPUT, output))
             break
 
     return block
 
 
 class EmbeddedSphinxShell(object):
     """An embedded IPython instance to run inside Sphinx"""
 
     def __init__(self, exec_lines=None):
 
         self.cout = StringIO()
 
         if exec_lines is None:
             exec_lines = []
 
         # Create config object for IPython
         config = Config()
         config.HistoryManager.hist_file = ':memory:'
         config.InteractiveShell.autocall = False
         config.InteractiveShell.autoindent = False
         config.InteractiveShell.colors = 'NoColor'
 
         # create a profile so instance history isn't saved
         tmp_profile_dir = tempfile.mkdtemp(prefix='profile_')
         profname = 'auto_profile_sphinx_build'
         pdir = os.path.join(tmp_profile_dir,profname)
         profile = ProfileDir.create_profile_dir(pdir)
 
         # Create and initialize global ipython, but don't start its mainloop.
         # This will persist across different EmbeddedSphinxShell instances.
         IP = InteractiveShell.instance(config=config, profile_dir=profile)
         atexit.register(self.cleanup)
 
         # Store a few parts of IPython we'll need.
         self.IP = IP
         self.user_ns = self.IP.user_ns
         self.user_global_ns = self.IP.user_global_ns
 
         self.lines_waiting = []
         self.input = ''
         self.output = ''
         self.tmp_profile_dir = tmp_profile_dir
 
         self.is_verbatim = False
         self.is_doctest = False
         self.is_suppress = False
 
         # Optionally, provide more detailed information to shell.
         # this is assigned by the SetUp method of IPythonDirective
         # to point at itself.
         #
         # So, you can access handy things at self.directive.state
         self.directive = None
 
         # on the first call to the savefig decorator, we'll import
         # pyplot as plt so we can make a call to the plt.gcf().savefig
         self._pyplot_imported = False
 
         # Prepopulate the namespace.
         for line in exec_lines:
             self.process_input_line(line, store_history=False)
 
     def cleanup(self):
         shutil.rmtree(self.tmp_profile_dir, ignore_errors=True)
 
     def clear_cout(self):
         self.cout.seek(0)
         self.cout.truncate(0)
 
     def process_input_line(self, line, store_history=True):
         """process the input, capturing stdout"""
-
         stdout = sys.stdout
         try:
             sys.stdout = self.cout
             self.lines_waiting.append(line)
-            if self.IP.check_complete()[0] != 'incomplete':
-                source_raw = ''.join(self.lines_waiting)
+            source_raw = ''.join(self.lines_waiting)
+            if self.IP.check_complete(source_raw)[0] != 'incomplete':
                 self.lines_waiting = []
                 self.IP.run_cell(source_raw, store_history=store_history)
         finally:
             sys.stdout = stdout
 
     def process_image(self, decorator):
         """
         # build out an image directive like
         # .. image:: somefile.png
         #    :width 4in
         #
         # from an input like
         # savefig somefile.png width=4in
         """
         savefig_dir = self.savefig_dir
         source_dir = self.source_dir
         saveargs = decorator.split(' ')
         filename = saveargs[1]
         # insert relative path to image file in source (as absolute path for Sphinx)
         outfile = '/' + os.path.relpath(os.path.join(savefig_dir,filename),
                                         source_dir)
 
         imagerows = ['.. image:: %s'%outfile]
 
         for kwarg in saveargs[2:]:
             arg, val = kwarg.split('=')
             arg = arg.strip()
             val = val.strip()
             imagerows.append('   :%s: %s'%(arg, val))
 
         image_file = os.path.basename(outfile) # only return file name
         image_directive = '\n'.join(imagerows)
         return image_file, image_directive
 
     # Callbacks for each type of token
     def process_input(self, data, input_prompt, lineno):
         """
         Process data block for INPUT token.
 
         """
         decorator, input, rest = data
         image_file = None
         image_directive = None
 
         is_verbatim = decorator=='@verbatim' or self.is_verbatim
         is_doctest = (decorator is not None and \
                      decorator.startswith('@doctest')) or self.is_doctest
         is_suppress = decorator=='@suppress' or self.is_suppress
         is_okexcept = decorator=='@okexcept' or self.is_okexcept
         is_okwarning = decorator=='@okwarning' or self.is_okwarning
         is_savefig = decorator is not None and \
                      decorator.startswith('@savefig')
 
         input_lines = input.split('\n')
         if len(input_lines) > 1:
             if input_lines[-1] != "":
                 input_lines.append('') # make sure there's a blank line
                                        # so splitter buffer gets reset
 
         continuation = '   %s:'%''.join(['.']*(len(str(lineno))+2))
 
         if is_savefig:
             image_file, image_directive = self.process_image(decorator)
 
         ret = []
         is_semicolon = False
 
         # Hold the execution count, if requested to do so.
         if is_suppress and self.hold_count:
             store_history = False
         else:
             store_history = True
 
         # Note: catch_warnings is not thread safe
         with warnings.catch_warnings(record=True) as ws:
             for i, line in enumerate(input_lines):
                 if line.endswith(';'):
                     is_semicolon = True
 
                 if i == 0:
                     # process the first input line
                     if is_verbatim:
                         self.process_input_line('')
                         self.IP.execution_count += 1 # increment it anyway
                     else:
                         # only submit the line in non-verbatim mode
                         self.process_input_line(line, store_history=store_history)
                     formatted_line = '%s %s'%(input_prompt, line)
                 else:
                     # process a continuation line
                     if not is_verbatim:
                         self.process_input_line(line, store_history=store_history)
 
                     formatted_line = '%s %s'%(continuation, line)
 
                 if not is_suppress:
                     ret.append(formatted_line)
 
         if not is_suppress and len(rest.strip()) and is_verbatim:
             # The "rest" is the standard output of the input. This needs to be
             # added when in verbatim mode. If there is no "rest", then we don't
             # add it, as the new line will be added by the processed output.
             ret.append(rest)
 
         # Fetch the processed output. (This is not the submitted output.)
         self.cout.seek(0)
         processed_output = self.cout.read()
         if not is_suppress and not is_semicolon:
             #
             # In IPythonDirective.run, the elements of `ret` are eventually
             # combined such that '' entries correspond to newlines. So if
             # `processed_output` is equal to '', then the adding it to `ret`
             # ensures that there is a blank line between consecutive inputs
             # that have no outputs, as in:
             #
             #    In [1]: x = 4
             #
             #    In [2]: x = 5
             #
             # When there is processed output, it has a '\n' at the tail end. So
             # adding the output to `ret` will provide the necessary spacing
             # between consecutive input/output blocks, as in:
             #
             #   In [1]: x
             #   Out[1]: 5
             #
             #   In [2]: x
             #   Out[2]: 5
             #
             # When there is stdout from the input, it also has a '\n' at the
             # tail end, and so this ensures proper spacing as well. E.g.:
             #
             #   In [1]: print x
             #   5
             #
             #   In [2]: x = 5
             #
             # When in verbatim mode, `processed_output` is empty (because
             # nothing was passed to IP. Sometimes the submitted code block has
             # an Out[] portion and sometimes it does not. When it does not, we
             # need to ensure proper spacing, so we have to add '' to `ret`.
             # However, if there is an Out[] in the submitted code, then we do
             # not want to add a newline as `process_output` has stuff to add.
             # The difficulty is that `process_input` doesn't know if
             # `process_output` will be called---so it doesn't know if there is
             # Out[] in the code block. The requires that we include a hack in
             # `process_block`. See the comments there.
             #
             ret.append(processed_output)
         elif is_semicolon:
             # Make sure there is a newline after the semicolon.
             ret.append('')
 
         # context information
         filename = "Unknown"
         lineno = 0
         if self.directive.state:
             filename = self.directive.state.document.current_source
             lineno = self.directive.state.document.current_line
 
         # output any exceptions raised during execution to stdout
         # unless :okexcept: has been specified.
         if not is_okexcept and "Traceback" in processed_output:
             s =  "\nException in %s at block ending on line %s\n" % (filename, lineno)
             s += "Specify :okexcept: as an option in the ipython:: block to suppress this message\n"
             sys.stdout.write('\n\n>>>' + ('-' * 73))
             sys.stdout.write(s)
             sys.stdout.write(processed_output)
             sys.stdout.write('<<<' + ('-' * 73) + '\n\n')
+            raise RuntimeError('Non Expected exception in `{}` line {}'.format(filename, lineno))
 
         # output any warning raised during execution to stdout
         # unless :okwarning: has been specified.
         if not is_okwarning:
             for w in ws:
                 s =  "\nWarning in %s at block ending on line %s\n" % (filename, lineno)
                 s += "Specify :okwarning: as an option in the ipython:: block to suppress this message\n"
                 sys.stdout.write('\n\n>>>' + ('-' * 73))
                 sys.stdout.write(s)
                 sys.stdout.write(('-' * 76) + '\n')
                 s=warnings.formatwarning(w.message, w.category,
                                          w.filename, w.lineno, w.line)
                 sys.stdout.write(s)
                 sys.stdout.write('<<<' + ('-' * 73) + '\n')
+                raise RuntimeError('Non Expected warning in `{}` line {}'.format(filename, lineno))
 
         self.cout.truncate(0)
 
         return (ret, input_lines, processed_output,
                 is_doctest, decorator, image_file, image_directive)
 
 
     def process_output(self, data, output_prompt, input_lines, output,
                        is_doctest, decorator, image_file):
         """
         Process data block for OUTPUT token.
 
         """
         # Recall: `data` is the submitted output, and `output` is the processed
         # output from `input_lines`.
 
         TAB = ' ' * 4
 
         if is_doctest and output is not None:
 
             found = output # This is the processed output
             found = found.strip()
             submitted = data.strip()
 
             if self.directive is None:
                 source = 'Unavailable'
                 content = 'Unavailable'
             else:
                 source = self.directive.state.document.current_source
                 content = self.directive.content
                 # Add tabs and join into a single string.
                 content = '\n'.join([TAB + line for line in content])
 
             # Make sure the output contains the output prompt.
             ind = found.find(output_prompt)
             if ind < 0:
                 e = ('output does not contain output prompt\n\n'
                      'Document source: {0}\n\n'
                      'Raw content: \n{1}\n\n'
                      'Input line(s):\n{TAB}{2}\n\n'
                      'Output line(s):\n{TAB}{3}\n\n')
                 e = e.format(source, content, '\n'.join(input_lines),
                              repr(found), TAB=TAB)
                 raise RuntimeError(e)
             found = found[len(output_prompt):].strip()
 
             # Handle the actual doctest comparison.
             if decorator.strip() == '@doctest':
                 # Standard doctest
                 if found != submitted:
                     e = ('doctest failure\n\n'
                          'Document source: {0}\n\n'
                          'Raw content: \n{1}\n\n'
                          'On input line(s):\n{TAB}{2}\n\n'
                          'we found output:\n{TAB}{3}\n\n'
                          'instead of the expected:\n{TAB}{4}\n\n')
                     e = e.format(source, content, '\n'.join(input_lines),
                                  repr(found), repr(submitted), TAB=TAB)
                     raise RuntimeError(e)
             else:
                 self.custom_doctest(decorator, input_lines, found, submitted)
 
         # When in verbatim mode, this holds additional submitted output
         # to be written in the final Sphinx output.
         # https://github.com/ipython/ipython/issues/5776
         out_data = []
 
         is_verbatim = decorator=='@verbatim' or self.is_verbatim
         if is_verbatim and data.strip():
             # Note that `ret` in `process_block` has '' as its last element if
             # the code block was in verbatim mode. So if there is no submitted
             # output, then we will have proper spacing only if we do not add
             # an additional '' to `out_data`. This is why we condition on
             # `and data.strip()`.
 
             # The submitted output has no output prompt. If we want the
             # prompt and the code to appear, we need to join them now
             # instead of adding them separately---as this would create an
             # undesired newline. How we do this ultimately depends on the
             # format of the output regex. I'll do what works for the default
             # prompt for now, and we might have to adjust if it doesn't work
             # in other cases. Finally, the submitted output does not have
             # a trailing newline, so we must add it manually.
             out_data.append("{0} {1}\n".format(output_prompt, data))
 
         return out_data
 
     def process_comment(self, data):
         """Process data fPblock for COMMENT token."""
         if not self.is_suppress:
             return [data]
 
     def save_image(self, image_file):
         """
         Saves the image file to disk.
         """
         self.ensure_pyplot()
         command = 'plt.gcf().savefig("%s")'%image_file
         #print 'SAVEFIG', command  # dbg
         self.process_input_line('bookmark ipy_thisdir', store_history=False)
         self.process_input_line('cd -b ipy_savedir', store_history=False)
         self.process_input_line(command, store_history=False)
         self.process_input_line('cd -b ipy_thisdir', store_history=False)
         self.process_input_line('bookmark -d ipy_thisdir', store_history=False)
         self.clear_cout()
 
     def process_block(self, block):
         """
         process block from the block_parser and return a list of processed lines
         """
         ret = []
         output = None
         input_lines = None
         lineno = self.IP.execution_count
 
         input_prompt = self.promptin % lineno
         output_prompt = self.promptout % lineno
         image_file = None
         image_directive = None
 
         found_input = False
         for token, data in block:
             if token == COMMENT:
                 out_data = self.process_comment(data)
             elif token == INPUT:
                 found_input = True
                 (out_data, input_lines, output, is_doctest,
                  decorator, image_file, image_directive) = \
                           self.process_input(data, input_prompt, lineno)
             elif token == OUTPUT:
                 if not found_input:
 
                     TAB = ' ' * 4
                     linenumber = 0
                     source = 'Unavailable'
                     content = 'Unavailable'
                     if self.directive:
                         linenumber = self.directive.state.document.current_line
                         source = self.directive.state.document.current_source
                         content = self.directive.content
                         # Add tabs and join into a single string.
                         content = '\n'.join([TAB + line for line in content])
 
                     e = ('\n\nInvalid block: Block contains an output prompt '
                          'without an input prompt.\n\n'
                          'Document source: {0}\n\n'
                          'Content begins at line {1}: \n\n{2}\n\n'
                          'Problematic block within content: \n\n{TAB}{3}\n\n')
                     e = e.format(source, linenumber, content, block, TAB=TAB)
 
                     # Write, rather than include in exception, since Sphinx
                     # will truncate tracebacks.
                     sys.stdout.write(e)
                     raise RuntimeError('An invalid block was detected.')
 
                 out_data = \
                     self.process_output(data, output_prompt, input_lines,
                                         output, is_doctest, decorator,
                                         image_file)
                 if out_data:
                     # Then there was user submitted output in verbatim mode.
                     # We need to remove the last element of `ret` that was
                     # added in `process_input`, as it is '' and would introduce
                     # an undesirable newline.
                     assert(ret[-1] == '')
                     del ret[-1]
 
             if out_data:
                 ret.extend(out_data)
 
         # save the image files
         if image_file is not None:
             self.save_image(image_file)
 
         return ret, image_directive
 
     def ensure_pyplot(self):
         """
         Ensures that pyplot has been imported into the embedded IPython shell.
 
         Also, makes sure to set the backend appropriately if not set already.
 
         """
         # We are here if the @figure pseudo decorator was used. Thus, it's
         # possible that we could be here even if python_mplbackend were set to
         # `None`. That's also strange and perhaps worthy of raising an
         # exception, but for now, we just set the backend to 'agg'.
 
         if not self._pyplot_imported:
             if 'matplotlib.backends' not in sys.modules:
                 # Then ipython_matplotlib was set to None but there was a
                 # call to the @figure decorator (and ipython_execlines did
                 # not set a backend).
                 #raise Exception("No backend was set, but @figure was used!")
                 import matplotlib
                 matplotlib.use('agg')
 
             # Always import pyplot into embedded shell.
             self.process_input_line('import matplotlib.pyplot as plt',
                                     store_history=False)
             self._pyplot_imported = True
 
     def process_pure_python(self, content):
         """
         content is a list of strings. it is unedited directive content
 
         This runs it line by line in the InteractiveShell, prepends
         prompts as needed capturing stderr and stdout, then returns
         the content as a list as if it were ipython code
         """
         output = []
         savefig = False # keep up with this to clear figure
         multiline = False # to handle line continuation
         multiline_start = None
         fmtin = self.promptin
 
         ct = 0
 
         for lineno, line in enumerate(content):
 
             line_stripped = line.strip()
             if not len(line):
                 output.append(line)
                 continue
 
             # handle decorators
             if line_stripped.startswith('@'):
                 output.extend([line])
                 if 'savefig' in line:
                     savefig = True # and need to clear figure
                 continue
 
             # handle comments
             if line_stripped.startswith('#'):
                 output.extend([line])
                 continue
 
             # deal with lines checking for multiline
             continuation  = u'   %s:'% ''.join(['.']*(len(str(ct))+2))
             if not multiline:
                 modified = u"%s %s" % (fmtin % ct, line_stripped)
                 output.append(modified)
                 ct += 1
                 try:
                     ast.parse(line_stripped)
                     output.append(u'')
                 except Exception: # on a multiline
                     multiline = True
                     multiline_start = lineno
             else: # still on a multiline
                 modified = u'%s %s' % (continuation, line)
                 output.append(modified)
 
                 # if the next line is indented, it should be part of multiline
                 if len(content) > lineno + 1:
                     nextline = content[lineno + 1]
                     if len(nextline) - len(nextline.lstrip()) > 3:
                         continue
                 try:
                     mod = ast.parse(
                             '\n'.join(content[multiline_start:lineno+1]))
                     if isinstance(mod.body[0], ast.FunctionDef):
                         # check to see if we have the whole function
                         for element in mod.body[0].body:
                             if isinstance(element, ast.Return):
                                 multiline = False
                     else:
                         output.append(u'')
                         multiline = False
                 except Exception:
                     pass
 
             if savefig: # clear figure if plotted
                 self.ensure_pyplot()
                 self.process_input_line('plt.clf()', store_history=False)
                 self.clear_cout()
                 savefig = False
 
         return output
 
     def custom_doctest(self, decorator, input_lines, found, submitted):
         """
         Perform a specialized doctest.
 
         """
         from .custom_doctests import doctests
 
         args = decorator.split()
         doctest_type = args[1]
         if doctest_type in doctests:
             doctests[doctest_type](self, args, input_lines, found, submitted)
         else:
             e = "Invalid option to @doctest: {0}".format(doctest_type)
             raise Exception(e)
 
 
 class IPythonDirective(Directive):
 
     has_content = True
     required_arguments = 0
     optional_arguments = 4 # python, suppress, verbatim, doctest
     final_argumuent_whitespace = True
     option_spec = { 'python': directives.unchanged,
                     'suppress' : directives.flag,
                     'verbatim' : directives.flag,
                     'doctest' : directives.flag,
                     'okexcept': directives.flag,
                     'okwarning': directives.flag
                   }
 
     shell = None
 
     seen_docs = set()
 
     def get_config_options(self):
         # contains sphinx configuration variables
         config = self.state.document.settings.env.config
 
         # get config variables to set figure output directory
         savefig_dir = config.ipython_savefig_dir
         source_dir = self.state.document.settings.env.srcdir
         savefig_dir = os.path.join(source_dir, savefig_dir)
 
         # get regex and prompt stuff
         rgxin      = config.ipython_rgxin
         rgxout     = config.ipython_rgxout
         promptin   = config.ipython_promptin
         promptout  = config.ipython_promptout
         mplbackend = config.ipython_mplbackend
         exec_lines = config.ipython_execlines
         hold_count = config.ipython_holdcount
 
         return (savefig_dir, source_dir, rgxin, rgxout,
                 promptin, promptout, mplbackend, exec_lines, hold_count)
 
     def setup(self):
         # Get configuration values.
         (savefig_dir, source_dir, rgxin, rgxout, promptin, promptout,
          mplbackend, exec_lines, hold_count) = self.get_config_options()
 
         try:
             os.makedirs(savefig_dir)
         except OSError as e:
             if e.errno != errno.EEXIST:
                 raise
 
         if self.shell is None:
             # We will be here many times.  However, when the
             # EmbeddedSphinxShell is created, its interactive shell member
             # is the same for each instance.
 
-            if mplbackend and 'matplotlib.backends' not in sys.modules:
+            if mplbackend and 'matplotlib.backends' not in sys.modules and use_matpltolib:
                 import matplotlib
                 matplotlib.use(mplbackend)
 
             # Must be called after (potentially) importing matplotlib and
             # setting its backend since exec_lines might import pylab.
             self.shell = EmbeddedSphinxShell(exec_lines)
 
             # Store IPython directive to enable better error messages
             self.shell.directive = self
 
         # reset the execution count if we haven't processed this doc
         #NOTE: this may be borked if there are multiple seen_doc tmp files
         #check time stamp?
         if not self.state.document.current_source in self.seen_docs:
             self.shell.IP.history_manager.reset()
             self.shell.IP.execution_count = 1
             self.seen_docs.add(self.state.document.current_source)
 
         # and attach to shell so we don't have to pass them around
         self.shell.rgxin = rgxin
         self.shell.rgxout = rgxout
         self.shell.promptin = promptin
         self.shell.promptout = promptout
         self.shell.savefig_dir = savefig_dir
         self.shell.source_dir = source_dir
         self.shell.hold_count = hold_count
 
         # setup bookmark for saving figures directory
         self.shell.process_input_line('bookmark ipy_savedir %s'%savefig_dir,
                                       store_history=False)
         self.shell.clear_cout()
 
         return rgxin, rgxout, promptin, promptout
 
     def teardown(self):
         # delete last bookmark
         self.shell.process_input_line('bookmark -d ipy_savedir',
                                       store_history=False)
         self.shell.clear_cout()
 
     def run(self):
         debug = False
 
         #TODO, any reason block_parser can't be a method of embeddable shell
         # then we wouldn't have to carry these around
         rgxin, rgxout, promptin, promptout = self.setup()
 
         options = self.options
         self.shell.is_suppress = 'suppress' in options
         self.shell.is_doctest = 'doctest' in options
         self.shell.is_verbatim = 'verbatim' in options
         self.shell.is_okexcept = 'okexcept' in options
         self.shell.is_okwarning = 'okwarning' in options
 
         # handle pure python code
         if 'python' in self.arguments:
             content = self.content
             self.content = self.shell.process_pure_python(content)
 
         # parts consists of all text within the ipython-block.
         # Each part is an input/output block.
         parts = '\n'.join(self.content).split('\n\n')
 
         lines = ['.. code-block:: ipython', '']
         figures = []
 
         for part in parts:
             block = block_parser(part, rgxin, rgxout, promptin, promptout)
             if len(block):
                 rows, figure = self.shell.process_block(block)
                 for row in rows:
                     lines.extend(['   {0}'.format(line)
                                   for line in row.split('\n')])
 
                 if figure is not None:
                     figures.append(figure)
 
         for figure in figures:
             lines.append('')
             lines.extend(figure.split('\n'))
             lines.append('')
 
         if len(lines) > 2:
             if debug:
                 print('\n'.join(lines))
             else:
                 # This has to do with input, not output. But if we comment
                 # these lines out, then no IPython code will appear in the
                 # final output.
                 self.state_machine.insert_input(
                     lines, self.state_machine.input_lines.source(0))
 
         # cleanup
         self.teardown()
 
         return []
 
 # Enable as a proper Sphinx directive
 def setup(app):
     setup.app = app
 
     app.add_directive('ipython', IPythonDirective)
     app.add_config_value('ipython_savefig_dir', 'savefig', 'env')
     app.add_config_value('ipython_rgxin',
                          re.compile('In \[(\d+)\]:\s?(.*)\s*'), 'env')
     app.add_config_value('ipython_rgxout',
                          re.compile('Out\[(\d+)\]:\s?(.*)\s*'), 'env')
     app.add_config_value('ipython_promptin', 'In [%d]:', 'env')
     app.add_config_value('ipython_promptout', 'Out[%d]:', 'env')
 
     # We could just let matplotlib pick whatever is specified as the default
     # backend in the matplotlibrc file, but this would cause issues if the
     # backend didn't work in headless environments. For this reason, 'agg'
     # is a good default backend choice.
     app.add_config_value('ipython_mplbackend', 'agg', 'env')
 
     # If the user sets this config value to `None`, then EmbeddedSphinxShell's
     # __init__ method will treat it as [].
-    execlines = ['import numpy as np', 'import matplotlib.pyplot as plt']
+    execlines = ['import numpy as np']
+    if use_matpltolib:
+        execlines.append('import matplotlib.pyplot as plt')
     app.add_config_value('ipython_execlines', execlines, 'env')
 
     app.add_config_value('ipython_holdcount', True, 'env')
 
     metadata = {'parallel_read_safe': True, 'parallel_write_safe': True}
     return metadata
 
 # Simple smoke test, needs to be converted to a proper automatic test.
 def test():
 
     examples = [
         r"""
 In [9]: pwd
 Out[9]: '/home/jdhunter/py4science/book'
 
 In [10]: cd bookdata/
 /home/jdhunter/py4science/book/bookdata
 
 In [2]: from pylab import *
 
 In [2]: ion()
 
 In [3]: im = imread('stinkbug.png')
 
 @savefig mystinkbug.png width=4in
 In [4]: imshow(im)
 Out[4]: <matplotlib.image.AxesImage object at 0x39ea850>
 
 """,
         r"""
 
 In [1]: x = 'hello world'
 
 # string methods can be
 # used to alter the string
 @doctest
 In [2]: x.upper()
 Out[2]: 'HELLO WORLD'
 
 @verbatim
 In [3]: x.st<TAB>
 x.startswith  x.strip
 """,
     r"""
 
 In [130]: url = 'http://ichart.finance.yahoo.com/table.csv?s=CROX\
    .....: &d=9&e=22&f=2009&g=d&a=1&br=8&c=2006&ignore=.csv'
 
 In [131]: print url.split('&')
 ['http://ichart.finance.yahoo.com/table.csv?s=CROX', 'd=9', 'e=22', 'f=2009', 'g=d', 'a=1', 'b=8', 'c=2006', 'ignore=.csv']
 
 In [60]: import urllib
 
 """,
     r"""\
 
 In [133]: import numpy.random
 
 @suppress
 In [134]: numpy.random.seed(2358)
 
 @doctest
 In [135]: numpy.random.rand(10,2)
 Out[135]:
 array([[ 0.64524308,  0.59943846],
        [ 0.47102322,  0.8715456 ],
        [ 0.29370834,  0.74776844],
        [ 0.99539577,  0.1313423 ],
        [ 0.16250302,  0.21103583],
        [ 0.81626524,  0.1312433 ],
        [ 0.67338089,  0.72302393],
        [ 0.7566368 ,  0.07033696],
        [ 0.22591016,  0.77731835],
        [ 0.0072729 ,  0.34273127]])
 
 """,
 
     r"""
 In [106]: print x
 jdh
 
 In [109]: for i in range(10):
    .....:     print i
    .....:
    .....:
 0
 1
 2
 3
 4
 5
 6
 7
 8
 9
 """,
 
         r"""
 
 In [144]: from pylab import *
 
 In [145]: ion()
 
 # use a semicolon to suppress the output
 @savefig test_hist.png width=4in
 In [151]: hist(np.random.randn(10000), 100);
 
 
 @savefig test_plot.png width=4in
 In [151]: plot(np.random.randn(10000), 'o');
    """,
 
         r"""
 # use a semicolon to suppress the output
 In [151]: plt.clf()
 
 @savefig plot_simple.png width=4in
 In [151]: plot([1,2,3])
 
 @savefig hist_simple.png width=4in
 In [151]: hist(np.random.randn(10000), 100);
 
 """,
      r"""
 # update the current fig
 In [151]: ylabel('number')
 
 In [152]: title('normal distribution')
 
 
 @savefig hist_with_text.png
 In [153]: grid(True)
 
 @doctest float
 In [154]: 0.1 + 0.2
 Out[154]: 0.3
 
 @doctest float
 In [155]: np.arange(16).reshape(4,4)
 Out[155]:
 array([[ 0,  1,  2,  3],
        [ 4,  5,  6,  7],
        [ 8,  9, 10, 11],
        [12, 13, 14, 15]])
 
 In [1]: x = np.arange(16, dtype=float).reshape(4,4)
 
 In [2]: x[0,0] = np.inf
 
 In [3]: x[0,1] = np.nan
 
 @doctest float
 In [4]: x
 Out[4]:
 array([[ inf,  nan,   2.,   3.],
        [  4.,   5.,   6.,   7.],
        [  8.,   9.,  10.,  11.],
        [ 12.,  13.,  14.,  15.]])
 
 
         """,
         ]
     # skip local-file depending first example:
     examples = examples[1:]
 
     #ipython_directive.DEBUG = True  # dbg
     #options = dict(suppress=True)  # dbg
     options = {}
     for example in examples:
         content = example.split('\n')
         IPythonDirective('debug', arguments=None, options=options,
                           content=content, lineno=0,
                           content_offset=None, block_text=None,
                           state=None, state_machine=None,
                           )
 
 # Run test suite as a script
 if __name__=='__main__':
     if not os.path.isdir('_static'):
         os.mkdir('_static')
     test()
     print('All OK? Check figures in _static/')

docs/source/sphinxext.rst

@@ -1,8 +1,6 b''
 ========================
 IPython Sphinx extension
 ========================
 
-IPython provides an extension for `Sphinx <http://www.sphinx-doc.org/>`_ to
-highlight and run code.
 
 .. automodule:: IPython.sphinxext.ipython_directive

docs/source/whatsnew/pr/incompat-switching-to-perl.rst

@@ -1,1 +1,7 b''
+Incompatible change switch to perl
+----------------------------------
+
+Document which filename start with ``incompat-`` will be gathers in their own
+incompatibility section.
+
 Starting with IPython 42, only perl code execution is allowed. See :ghpull:`42`