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@@ -1,151 +1,164 | |||||
1 | """Implementation of packaging-related magic functions. |
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1 | """Implementation of packaging-related magic functions. | |
2 | """ |
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2 | """ | |
3 | #----------------------------------------------------------------------------- |
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3 | #----------------------------------------------------------------------------- | |
4 | # Copyright (c) 2018 The IPython Development Team. |
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4 | # Copyright (c) 2018 The IPython Development Team. | |
5 | # |
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5 | # | |
6 | # Distributed under the terms of the Modified BSD License. |
|
6 | # Distributed under the terms of the Modified BSD License. | |
7 | # |
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7 | # | |
8 | # The full license is in the file COPYING.txt, distributed with this software. |
|
8 | # The full license is in the file COPYING.txt, distributed with this software. | |
9 | #----------------------------------------------------------------------------- |
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9 | #----------------------------------------------------------------------------- | |
10 |
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10 | |||
11 | import functools |
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11 | import functools | |
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12 | import os | |||
12 | import re |
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13 | import re | |
13 | import shlex |
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14 | import shlex | |
14 | import sys |
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15 | import sys | |
15 | from pathlib import Path |
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16 | from pathlib import Path | |
16 |
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17 | |||
17 | from IPython.core.magic import Magics, magics_class, line_magic |
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18 | from IPython.core.magic import Magics, magics_class, line_magic | |
18 |
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19 | |||
19 |
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20 | |||
20 | def is_conda_environment(func): |
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21 | def is_conda_environment(func): | |
21 | @functools.wraps(func) |
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22 | @functools.wraps(func) | |
22 | def wrapper(*args, **kwargs): |
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23 | def wrapper(*args, **kwargs): | |
23 | """Return True if the current Python executable is in a conda env""" |
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24 | """Return True if the current Python executable is in a conda env""" | |
24 | # TODO: does this need to change on windows? |
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25 | # TODO: does this need to change on windows? | |
25 | if not Path(sys.prefix, "conda-meta", "history").exists(): |
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26 | if not Path(sys.prefix, "conda-meta", "history").exists(): | |
26 | raise ValueError( |
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27 | raise ValueError( | |
27 | "The python kernel does not appear to be a conda environment. " |
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28 | "The python kernel does not appear to be a conda environment. " | |
28 | "Please use ``%pip install`` instead." |
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29 | "Please use ``%pip install`` instead." | |
29 | ) |
|
30 | ) | |
30 | return func(*args, **kwargs) |
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31 | return func(*args, **kwargs) | |
31 |
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32 | |||
32 | return wrapper |
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33 | return wrapper | |
33 |
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34 | |||
34 |
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35 | |||
35 | def _get_conda_like_executable(command): |
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36 | def _get_conda_like_executable(command): | |
36 | """Find the path to the given executable |
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37 | """Find the path to the given executable | |
37 |
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38 | |||
38 | Parameters |
|
39 | Parameters | |
39 | ---------- |
|
40 | ---------- | |
40 |
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41 | |||
41 | executable: string |
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42 | executable: string | |
42 | Value should be: conda, mamba or micromamba |
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43 | Value should be: conda, mamba or micromamba | |
43 | """ |
|
44 | """ | |
|
45 | # Check for a environment variable bound to the base executable, both conda and mamba | |||
|
46 | # set these when activating an environment. | |||
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47 | base_executable = "CONDA_EXE" | |||
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48 | if "mamba" in command.lower(): | |||
|
49 | base_executable = "MAMBA_EXE" | |||
|
50 | if base_executable in os.environ: | |||
|
51 | executable = Path(os.environ[base_executable]) | |||
|
52 | if executable.is_file(): | |||
|
53 | return str(executable.resolve()) | |||
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54 | ||||
44 | # Check if there is a conda executable in the same directory as the Python executable. |
|
55 | # Check if there is a conda executable in the same directory as the Python executable. | |
45 | # This is the case within conda's root environment. |
|
56 | # This is the case within conda's root environment. | |
46 | executable = Path(sys.executable).parent / command |
|
57 | executable = Path(sys.executable).parent / command | |
47 | if executable.is_file(): |
|
58 | if executable.is_file(): | |
48 | return str(executable) |
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59 | return str(executable) | |
49 |
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60 | |||
50 | # Otherwise, attempt to extract the executable from conda history. |
|
61 | # Otherwise, attempt to extract the executable from conda history. | |
51 | # This applies in any conda environment. |
|
62 | # This applies in any conda environment. Parsing this way is error prone because | |
|
63 | # different versions of conda and mamba include differing cmd values such as | |||
|
64 | # `conda`, `conda-script.py`, or `path/to/conda`, here use the raw command provided. | |||
52 | history = Path(sys.prefix, "conda-meta", "history").read_text(encoding="utf-8") |
|
65 | history = Path(sys.prefix, "conda-meta", "history").read_text(encoding="utf-8") | |
53 | match = re.search( |
|
66 | match = re.search( | |
54 |
rf"^#\s*cmd:\s*(?P<command>.*{ |
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67 | rf"^#\s*cmd:\s*(?P<command>.*{command})\s[create|install]", | |
55 | history, |
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68 | history, | |
56 | flags=re.MULTILINE, |
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69 | flags=re.MULTILINE, | |
57 | ) |
|
70 | ) | |
58 | if match: |
|
71 | if match: | |
59 | return match.groupdict()["command"] |
|
72 | return match.groupdict()["command"] | |
60 |
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73 | |||
61 | # Fallback: assume the executable is available on the system path. |
|
74 | # Fallback: assume the executable is available on the system path. | |
62 | return command |
|
75 | return command | |
63 |
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76 | |||
64 |
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77 | |||
65 | CONDA_COMMANDS_REQUIRING_PREFIX = { |
|
78 | CONDA_COMMANDS_REQUIRING_PREFIX = { | |
66 | 'install', 'list', 'remove', 'uninstall', 'update', 'upgrade', |
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79 | 'install', 'list', 'remove', 'uninstall', 'update', 'upgrade', | |
67 | } |
|
80 | } | |
68 | CONDA_COMMANDS_REQUIRING_YES = { |
|
81 | CONDA_COMMANDS_REQUIRING_YES = { | |
69 | 'install', 'remove', 'uninstall', 'update', 'upgrade', |
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82 | 'install', 'remove', 'uninstall', 'update', 'upgrade', | |
70 | } |
|
83 | } | |
71 | CONDA_ENV_FLAGS = {'-p', '--prefix', '-n', '--name'} |
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84 | CONDA_ENV_FLAGS = {'-p', '--prefix', '-n', '--name'} | |
72 | CONDA_YES_FLAGS = {'-y', '--y'} |
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85 | CONDA_YES_FLAGS = {'-y', '--y'} | |
73 |
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86 | |||
74 |
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87 | |||
75 | @magics_class |
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88 | @magics_class | |
76 | class PackagingMagics(Magics): |
|
89 | class PackagingMagics(Magics): | |
77 | """Magics related to packaging & installation""" |
|
90 | """Magics related to packaging & installation""" | |
78 |
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91 | |||
79 | @line_magic |
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92 | @line_magic | |
80 | def pip(self, line): |
|
93 | def pip(self, line): | |
81 | """Run the pip package manager within the current kernel. |
|
94 | """Run the pip package manager within the current kernel. | |
82 |
|
95 | |||
83 | Usage: |
|
96 | Usage: | |
84 | %pip install [pkgs] |
|
97 | %pip install [pkgs] | |
85 | """ |
|
98 | """ | |
86 | python = sys.executable |
|
99 | python = sys.executable | |
87 | if sys.platform == "win32": |
|
100 | if sys.platform == "win32": | |
88 | python = '"' + python + '"' |
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101 | python = '"' + python + '"' | |
89 | else: |
|
102 | else: | |
90 | python = shlex.quote(python) |
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103 | python = shlex.quote(python) | |
91 |
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104 | |||
92 | self.shell.system(" ".join([python, "-m", "pip", line])) |
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105 | self.shell.system(" ".join([python, "-m", "pip", line])) | |
93 |
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106 | |||
94 | print("Note: you may need to restart the kernel to use updated packages.") |
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107 | print("Note: you may need to restart the kernel to use updated packages.") | |
95 |
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108 | |||
96 | def _run_command(self, cmd, line): |
|
109 | def _run_command(self, cmd, line): | |
97 | args = shlex.split(line) |
|
110 | args = shlex.split(line) | |
98 | command = args[0] if len(args) > 0 else "" |
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111 | command = args[0] if len(args) > 0 else "" | |
99 | args = args[1:] if len(args) > 1 else [""] |
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112 | args = args[1:] if len(args) > 1 else [""] | |
100 |
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113 | |||
101 | extra_args = [] |
|
114 | extra_args = [] | |
102 |
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115 | |||
103 | # When the subprocess does not allow us to respond "yes" during the installation, |
|
116 | # When the subprocess does not allow us to respond "yes" during the installation, | |
104 | # we need to insert --yes in the argument list for some commands |
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117 | # we need to insert --yes in the argument list for some commands | |
105 | stdin_disabled = getattr(self.shell, 'kernel', None) is not None |
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118 | stdin_disabled = getattr(self.shell, 'kernel', None) is not None | |
106 | needs_yes = command in CONDA_COMMANDS_REQUIRING_YES |
|
119 | needs_yes = command in CONDA_COMMANDS_REQUIRING_YES | |
107 | has_yes = set(args).intersection(CONDA_YES_FLAGS) |
|
120 | has_yes = set(args).intersection(CONDA_YES_FLAGS) | |
108 | if stdin_disabled and needs_yes and not has_yes: |
|
121 | if stdin_disabled and needs_yes and not has_yes: | |
109 | extra_args.append("--yes") |
|
122 | extra_args.append("--yes") | |
110 |
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123 | |||
111 | # Add --prefix to point conda installation to the current environment |
|
124 | # Add --prefix to point conda installation to the current environment | |
112 | needs_prefix = command in CONDA_COMMANDS_REQUIRING_PREFIX |
|
125 | needs_prefix = command in CONDA_COMMANDS_REQUIRING_PREFIX | |
113 | has_prefix = set(args).intersection(CONDA_ENV_FLAGS) |
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126 | has_prefix = set(args).intersection(CONDA_ENV_FLAGS) | |
114 | if needs_prefix and not has_prefix: |
|
127 | if needs_prefix and not has_prefix: | |
115 | extra_args.extend(["--prefix", sys.prefix]) |
|
128 | extra_args.extend(["--prefix", sys.prefix]) | |
116 |
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129 | |||
117 | self.shell.system(" ".join([cmd, command] + extra_args + args)) |
|
130 | self.shell.system(" ".join([cmd, command] + extra_args + args)) | |
118 | print("\nNote: you may need to restart the kernel to use updated packages.") |
|
131 | print("\nNote: you may need to restart the kernel to use updated packages.") | |
119 |
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132 | |||
120 | @line_magic |
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133 | @line_magic | |
121 | @is_conda_environment |
|
134 | @is_conda_environment | |
122 | def conda(self, line): |
|
135 | def conda(self, line): | |
123 | """Run the conda package manager within the current kernel. |
|
136 | """Run the conda package manager within the current kernel. | |
124 |
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137 | |||
125 | Usage: |
|
138 | Usage: | |
126 | %conda install [pkgs] |
|
139 | %conda install [pkgs] | |
127 | """ |
|
140 | """ | |
128 | conda = _get_conda_like_executable("conda") |
|
141 | conda = _get_conda_like_executable("conda") | |
129 | self._run_command(conda, line) |
|
142 | self._run_command(conda, line) | |
130 |
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143 | |||
131 | @line_magic |
|
144 | @line_magic | |
132 | @is_conda_environment |
|
145 | @is_conda_environment | |
133 | def mamba(self, line): |
|
146 | def mamba(self, line): | |
134 | """Run the mamba package manager within the current kernel. |
|
147 | """Run the mamba package manager within the current kernel. | |
135 |
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148 | |||
136 | Usage: |
|
149 | Usage: | |
137 | %mamba install [pkgs] |
|
150 | %mamba install [pkgs] | |
138 | """ |
|
151 | """ | |
139 | mamba = _get_conda_like_executable("mamba") |
|
152 | mamba = _get_conda_like_executable("mamba") | |
140 | self._run_command(mamba, line) |
|
153 | self._run_command(mamba, line) | |
141 |
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154 | |||
142 | @line_magic |
|
155 | @line_magic | |
143 | @is_conda_environment |
|
156 | @is_conda_environment | |
144 | def micromamba(self, line): |
|
157 | def micromamba(self, line): | |
145 | """Run the conda package manager within the current kernel. |
|
158 | """Run the conda package manager within the current kernel. | |
146 |
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159 | |||
147 | Usage: |
|
160 | Usage: | |
148 | %micromamba install [pkgs] |
|
161 | %micromamba install [pkgs] | |
149 | """ |
|
162 | """ | |
150 | micromamba = _get_conda_like_executable("micromamba") |
|
163 | micromamba = _get_conda_like_executable("micromamba") | |
151 | self._run_command(micromamba, line) |
|
164 | self._run_command(micromamba, line) |
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