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@@ -0,0 +1,12 b'' | |||
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1 | """The IPython HTML Notebook""" | |
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2 | ||
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3 | # check for tornado 2.1.0 | |
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4 | msg = "The IPython Notebook requires tornado >= 2.1.0" | |
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5 | try: | |
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6 | import tornado | |
|
7 | except ImportError: | |
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8 | raise ImportError(msg) | |
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9 | else: | |
|
10 | if tornado.version_info < (2,1,0): | |
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11 | raise ImportError(msg+", but you have %s"%tornado.version) | |
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12 | del msg |
@@ -1,441 +1,449 b'' | |||
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1 | 1 | # -*- coding: utf-8 -*- |
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2 | 2 | """IPython Test Suite Runner. |
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3 | 3 | |
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4 | 4 | This module provides a main entry point to a user script to test IPython |
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5 | 5 | itself from the command line. There are two ways of running this script: |
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6 | 6 | |
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7 | 7 | 1. With the syntax `iptest all`. This runs our entire test suite by |
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8 | 8 | calling this script (with different arguments) recursively. This |
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9 | 9 | causes modules and package to be tested in different processes, using nose |
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10 | 10 | or trial where appropriate. |
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11 | 11 | 2. With the regular nose syntax, like `iptest -vvs IPython`. In this form |
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12 | 12 | the script simply calls nose, but with special command line flags and |
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13 | 13 | plugins loaded. |
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14 | 14 | |
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15 | 15 | """ |
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16 | 16 | |
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17 | 17 | #----------------------------------------------------------------------------- |
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18 | 18 | # Copyright (C) 2009 The IPython Development Team |
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19 | 19 | # |
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20 | 20 | # Distributed under the terms of the BSD License. The full license is in |
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21 | 21 | # the file COPYING, distributed as part of this software. |
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22 | 22 | #----------------------------------------------------------------------------- |
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23 | 23 | |
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24 | 24 | #----------------------------------------------------------------------------- |
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25 | 25 | # Imports |
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26 | 26 | #----------------------------------------------------------------------------- |
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27 | 27 | |
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28 | 28 | # Stdlib |
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29 | 29 | import os |
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30 | 30 | import os.path as path |
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31 | 31 | import signal |
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32 | 32 | import sys |
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33 | 33 | import subprocess |
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34 | 34 | import tempfile |
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35 | 35 | import time |
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36 | 36 | import warnings |
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37 | 37 | |
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38 | 38 | # Note: monkeypatch! |
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39 | 39 | # We need to monkeypatch a small problem in nose itself first, before importing |
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40 | 40 | # it for actual use. This should get into nose upstream, but its release cycle |
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41 | 41 | # is slow and we need it for our parametric tests to work correctly. |
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42 | 42 | from IPython.testing import nosepatch |
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43 | 43 | # Now, proceed to import nose itself |
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44 | 44 | import nose.plugins.builtin |
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45 | 45 | from nose.core import TestProgram |
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46 | 46 | |
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47 | 47 | # Our own imports |
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48 | 48 | from IPython.utils.path import get_ipython_module_path |
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49 | 49 | from IPython.utils.process import find_cmd, pycmd2argv |
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50 | 50 | from IPython.utils.sysinfo import sys_info |
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51 | 51 | |
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52 | 52 | from IPython.testing import globalipapp |
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53 | 53 | from IPython.testing.plugin.ipdoctest import IPythonDoctest |
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54 | 54 | from IPython.external.decorators import KnownFailure |
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55 | 55 | |
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56 | 56 | pjoin = path.join |
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57 | 57 | |
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58 | 58 | |
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59 | 59 | #----------------------------------------------------------------------------- |
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60 | 60 | # Globals |
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61 | 61 | #----------------------------------------------------------------------------- |
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62 | 62 | |
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63 | 63 | |
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64 | 64 | #----------------------------------------------------------------------------- |
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65 | 65 | # Warnings control |
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66 | 66 | #----------------------------------------------------------------------------- |
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67 | 67 | |
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68 | 68 | # Twisted generates annoying warnings with Python 2.6, as will do other code |
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69 | 69 | # that imports 'sets' as of today |
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70 | 70 | warnings.filterwarnings('ignore', 'the sets module is deprecated', |
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71 | 71 | DeprecationWarning ) |
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72 | 72 | |
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73 | 73 | # This one also comes from Twisted |
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74 | 74 | warnings.filterwarnings('ignore', 'the sha module is deprecated', |
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75 | 75 | DeprecationWarning) |
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76 | 76 | |
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77 | 77 | # Wx on Fedora11 spits these out |
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78 | 78 | warnings.filterwarnings('ignore', 'wxPython/wxWidgets release number mismatch', |
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79 | 79 | UserWarning) |
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80 | 80 | |
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81 | 81 | #----------------------------------------------------------------------------- |
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82 | 82 | # Logic for skipping doctests |
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83 | 83 | #----------------------------------------------------------------------------- |
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84 | 84 | |
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85 | 85 | def test_for(mod, min_version=None): |
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86 | 86 | """Test to see if mod is importable.""" |
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87 | 87 | try: |
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88 | 88 | __import__(mod) |
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89 | 89 | except (ImportError, RuntimeError): |
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90 | 90 | # GTK reports Runtime error if it can't be initialized even if it's |
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91 | 91 | # importable. |
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92 | 92 | return False |
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93 | 93 | else: |
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94 | 94 | if min_version: |
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95 | 95 | return sys.modules[mod].__version__ >= min_version |
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96 | 96 | else: |
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97 | 97 | return True |
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98 | 98 | |
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99 | 99 | # Global dict where we can store information on what we have and what we don't |
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100 | 100 | # have available at test run time |
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101 | 101 | have = {} |
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102 | 102 | |
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103 | 103 | have['curses'] = test_for('_curses') |
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104 | 104 | have['matplotlib'] = test_for('matplotlib') |
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105 | 105 | have['pexpect'] = test_for('pexpect') |
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106 | 106 | have['pymongo'] = test_for('pymongo') |
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107 | 107 | have['wx'] = test_for('wx') |
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108 | 108 | have['wx.aui'] = test_for('wx.aui') |
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109 | 109 | if os.name == 'nt': |
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110 | 110 | have['zmq'] = test_for('zmq', '2.1.7') |
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111 | 111 | else: |
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112 | 112 | have['zmq'] = test_for('zmq', '2.1.4') |
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113 | 113 | have['qt'] = test_for('IPython.external.qt') |
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114 | have['tornado'] = test_for('tornado') | |
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114 | ||
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115 | try: | |
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116 | import tornado | |
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117 | if tornado.version_info < (2,1,0): | |
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118 | raise ImportError | |
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119 | except ImportError: | |
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120 | have['tornado'] = False | |
|
121 | else: | |
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122 | have['tornado'] = True | |
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115 | 123 | |
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116 | 124 | #----------------------------------------------------------------------------- |
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117 | 125 | # Functions and classes |
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118 | 126 | #----------------------------------------------------------------------------- |
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119 | 127 | |
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120 | 128 | def report(): |
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121 | 129 | """Return a string with a summary report of test-related variables.""" |
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122 | 130 | |
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123 | 131 | out = [ sys_info(), '\n'] |
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124 | 132 | |
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125 | 133 | avail = [] |
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126 | 134 | not_avail = [] |
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127 | 135 | |
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128 | 136 | for k, is_avail in have.items(): |
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129 | 137 | if is_avail: |
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130 | 138 | avail.append(k) |
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131 | 139 | else: |
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132 | 140 | not_avail.append(k) |
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133 | 141 | |
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134 | 142 | if avail: |
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135 | 143 | out.append('\nTools and libraries available at test time:\n') |
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136 | 144 | avail.sort() |
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137 | 145 | out.append(' ' + ' '.join(avail)+'\n') |
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138 | 146 | |
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139 | 147 | if not_avail: |
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140 | 148 | out.append('\nTools and libraries NOT available at test time:\n') |
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141 | 149 | not_avail.sort() |
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142 | 150 | out.append(' ' + ' '.join(not_avail)+'\n') |
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143 | 151 | |
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144 | 152 | return ''.join(out) |
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145 | 153 | |
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146 | 154 | |
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147 | 155 | def make_exclude(): |
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148 | 156 | """Make patterns of modules and packages to exclude from testing. |
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149 | 157 | |
|
150 | 158 | For the IPythonDoctest plugin, we need to exclude certain patterns that |
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151 | 159 | cause testing problems. We should strive to minimize the number of |
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152 | 160 | skipped modules, since this means untested code. |
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153 | 161 | |
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154 | 162 | These modules and packages will NOT get scanned by nose at all for tests. |
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155 | 163 | """ |
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156 | 164 | # Simple utility to make IPython paths more readably, we need a lot of |
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157 | 165 | # these below |
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158 | 166 | ipjoin = lambda *paths: pjoin('IPython', *paths) |
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159 | 167 | |
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160 | 168 | exclusions = [ipjoin('external'), |
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161 | 169 | pjoin('IPython_doctest_plugin'), |
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162 | 170 | ipjoin('quarantine'), |
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163 | 171 | ipjoin('deathrow'), |
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164 | 172 | ipjoin('testing', 'attic'), |
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165 | 173 | # This guy is probably attic material |
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166 | 174 | ipjoin('testing', 'mkdoctests'), |
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167 | 175 | # Testing inputhook will need a lot of thought, to figure out |
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168 | 176 | # how to have tests that don't lock up with the gui event |
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169 | 177 | # loops in the picture |
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170 | 178 | ipjoin('lib', 'inputhook'), |
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171 | 179 | # Config files aren't really importable stand-alone |
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172 | 180 | ipjoin('config', 'default'), |
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173 | 181 | ipjoin('config', 'profile'), |
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174 | 182 | ] |
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175 | 183 | |
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176 | 184 | if not have['wx']: |
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177 | 185 | exclusions.append(ipjoin('lib', 'inputhookwx')) |
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178 | 186 | |
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179 | 187 | # We do this unconditionally, so that the test suite doesn't import |
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180 | 188 | # gtk, changing the default encoding and masking some unicode bugs. |
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181 | 189 | exclusions.append(ipjoin('lib', 'inputhookgtk')) |
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182 | 190 | |
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183 | 191 | # These have to be skipped on win32 because the use echo, rm, cd, etc. |
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184 | 192 | # See ticket https://github.com/ipython/ipython/issues/87 |
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185 | 193 | if sys.platform == 'win32': |
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186 | 194 | exclusions.append(ipjoin('testing', 'plugin', 'test_exampleip')) |
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187 | 195 | exclusions.append(ipjoin('testing', 'plugin', 'dtexample')) |
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188 | 196 | |
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189 | 197 | if not have['pexpect']: |
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190 | 198 | exclusions.extend([ipjoin('scripts', 'irunner'), |
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191 | 199 | ipjoin('lib', 'irunner'), |
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192 | 200 | ipjoin('lib', 'tests', 'test_irunner')]) |
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193 | 201 | |
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194 | 202 | if not have['zmq']: |
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195 | 203 | exclusions.append(ipjoin('zmq')) |
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196 | 204 | exclusions.append(ipjoin('frontend', 'qt')) |
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197 | 205 | exclusions.append(ipjoin('parallel')) |
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198 | 206 | elif not have['qt']: |
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199 | 207 | exclusions.append(ipjoin('frontend', 'qt')) |
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200 | 208 | |
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201 | 209 | if not have['pymongo']: |
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202 | 210 | exclusions.append(ipjoin('parallel', 'controller', 'mongodb')) |
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203 | 211 | exclusions.append(ipjoin('parallel', 'tests', 'test_mongodb')) |
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204 | 212 | |
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205 | 213 | if not have['matplotlib']: |
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206 | 214 | exclusions.extend([ipjoin('lib', 'pylabtools'), |
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207 | 215 | ipjoin('lib', 'tests', 'test_pylabtools')]) |
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208 | 216 | |
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209 | 217 | if not have['tornado']: |
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210 | 218 | exclusions.append(ipjoin('frontend', 'html')) |
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211 | 219 | |
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212 | 220 | # This is needed for the reg-exp to match on win32 in the ipdoctest plugin. |
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213 | 221 | if sys.platform == 'win32': |
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214 | 222 | exclusions = [s.replace('\\','\\\\') for s in exclusions] |
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215 | 223 | |
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216 | 224 | return exclusions |
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217 | 225 | |
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218 | 226 | |
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219 | 227 | class IPTester(object): |
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220 | 228 | """Call that calls iptest or trial in a subprocess. |
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221 | 229 | """ |
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222 | 230 | #: string, name of test runner that will be called |
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223 | 231 | runner = None |
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224 | 232 | #: list, parameters for test runner |
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225 | 233 | params = None |
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226 | 234 | #: list, arguments of system call to be made to call test runner |
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227 | 235 | call_args = None |
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228 | 236 | #: list, process ids of subprocesses we start (for cleanup) |
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229 | 237 | pids = None |
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230 | 238 | |
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231 | 239 | def __init__(self, runner='iptest', params=None): |
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232 | 240 | """Create new test runner.""" |
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233 | 241 | p = os.path |
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234 | 242 | if runner == 'iptest': |
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235 | 243 | iptest_app = get_ipython_module_path('IPython.testing.iptest') |
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236 | 244 | self.runner = pycmd2argv(iptest_app) + sys.argv[1:] |
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237 | 245 | else: |
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238 | 246 | raise Exception('Not a valid test runner: %s' % repr(runner)) |
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239 | 247 | if params is None: |
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240 | 248 | params = [] |
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241 | 249 | if isinstance(params, str): |
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242 | 250 | params = [params] |
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243 | 251 | self.params = params |
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244 | 252 | |
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245 | 253 | # Assemble call |
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246 | 254 | self.call_args = self.runner+self.params |
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247 | 255 | |
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248 | 256 | # Store pids of anything we start to clean up on deletion, if possible |
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249 | 257 | # (on posix only, since win32 has no os.kill) |
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250 | 258 | self.pids = [] |
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251 | 259 | |
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252 | 260 | if sys.platform == 'win32': |
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253 | 261 | def _run_cmd(self): |
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254 | 262 | # On Windows, use os.system instead of subprocess.call, because I |
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255 | 263 | # was having problems with subprocess and I just don't know enough |
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256 | 264 | # about win32 to debug this reliably. Os.system may be the 'old |
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257 | 265 | # fashioned' way to do it, but it works just fine. If someone |
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258 | 266 | # later can clean this up that's fine, as long as the tests run |
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259 | 267 | # reliably in win32. |
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260 | 268 | # What types of problems are you having. They may be related to |
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261 | 269 | # running Python in unboffered mode. BG. |
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262 | 270 | return os.system(' '.join(self.call_args)) |
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263 | 271 | else: |
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264 | 272 | def _run_cmd(self): |
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265 | 273 | # print >> sys.stderr, '*** CMD:', ' '.join(self.call_args) # dbg |
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266 | 274 | subp = subprocess.Popen(self.call_args) |
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267 | 275 | self.pids.append(subp.pid) |
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268 | 276 | # If this fails, the pid will be left in self.pids and cleaned up |
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269 | 277 | # later, but if the wait call succeeds, then we can clear the |
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270 | 278 | # stored pid. |
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271 | 279 | retcode = subp.wait() |
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272 | 280 | self.pids.pop() |
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273 | 281 | return retcode |
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274 | 282 | |
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275 | 283 | def run(self): |
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276 | 284 | """Run the stored commands""" |
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277 | 285 | try: |
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278 | 286 | return self._run_cmd() |
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279 | 287 | except: |
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280 | 288 | import traceback |
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281 | 289 | traceback.print_exc() |
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282 | 290 | return 1 # signal failure |
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283 | 291 | |
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284 | 292 | def __del__(self): |
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285 | 293 | """Cleanup on exit by killing any leftover processes.""" |
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286 | 294 | |
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287 | 295 | if not hasattr(os, 'kill'): |
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288 | 296 | return |
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289 | 297 | |
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290 | 298 | for pid in self.pids: |
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291 | 299 | try: |
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292 | 300 | print 'Cleaning stale PID:', pid |
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293 | 301 | os.kill(pid, signal.SIGKILL) |
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294 | 302 | except OSError: |
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295 | 303 | # This is just a best effort, if we fail or the process was |
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296 | 304 | # really gone, ignore it. |
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297 | 305 | pass |
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298 | 306 | |
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299 | 307 | |
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300 | 308 | def make_runners(): |
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301 | 309 | """Define the top-level packages that need to be tested. |
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302 | 310 | """ |
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303 | 311 | |
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304 | 312 | # Packages to be tested via nose, that only depend on the stdlib |
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305 | 313 | nose_pkg_names = ['config', 'core', 'extensions', 'frontend', 'lib', |
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306 | 314 | 'scripts', 'testing', 'utils', 'nbformat' ] |
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307 | 315 | |
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308 | 316 | if have['zmq']: |
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309 | 317 | nose_pkg_names.append('parallel') |
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310 | 318 | |
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311 | 319 | # For debugging this code, only load quick stuff |
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312 | 320 | #nose_pkg_names = ['core', 'extensions'] # dbg |
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313 | 321 | |
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314 | 322 | # Make fully qualified package names prepending 'IPython.' to our name lists |
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315 | 323 | nose_packages = ['IPython.%s' % m for m in nose_pkg_names ] |
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316 | 324 | |
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317 | 325 | # Make runners |
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318 | 326 | runners = [ (v, IPTester('iptest', params=v)) for v in nose_packages ] |
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319 | 327 | |
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320 | 328 | return runners |
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321 | 329 | |
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322 | 330 | |
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323 | 331 | def run_iptest(): |
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324 | 332 | """Run the IPython test suite using nose. |
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325 | 333 | |
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326 | 334 | This function is called when this script is **not** called with the form |
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327 | 335 | `iptest all`. It simply calls nose with appropriate command line flags |
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328 | 336 | and accepts all of the standard nose arguments. |
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329 | 337 | """ |
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330 | 338 | |
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331 | 339 | warnings.filterwarnings('ignore', |
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332 | 340 | 'This will be removed soon. Use IPython.testing.util instead') |
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333 | 341 | |
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334 | 342 | argv = sys.argv + [ '--detailed-errors', # extra info in tracebacks |
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335 | 343 | |
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336 | 344 | # Loading ipdoctest causes problems with Twisted, but |
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337 | 345 | # our test suite runner now separates things and runs |
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338 | 346 | # all Twisted tests with trial. |
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339 | 347 | '--with-ipdoctest', |
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340 | 348 | '--ipdoctest-tests','--ipdoctest-extension=txt', |
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341 | 349 | |
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342 | 350 | # We add --exe because of setuptools' imbecility (it |
|
343 | 351 | # blindly does chmod +x on ALL files). Nose does the |
|
344 | 352 | # right thing and it tries to avoid executables, |
|
345 | 353 | # setuptools unfortunately forces our hand here. This |
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346 | 354 | # has been discussed on the distutils list and the |
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347 | 355 | # setuptools devs refuse to fix this problem! |
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348 | 356 | '--exe', |
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349 | 357 | ] |
|
350 | 358 | |
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351 | 359 | if nose.__version__ >= '0.11': |
|
352 | 360 | # I don't fully understand why we need this one, but depending on what |
|
353 | 361 | # directory the test suite is run from, if we don't give it, 0 tests |
|
354 | 362 | # get run. Specifically, if the test suite is run from the source dir |
|
355 | 363 | # with an argument (like 'iptest.py IPython.core', 0 tests are run, |
|
356 | 364 | # even if the same call done in this directory works fine). It appears |
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357 | 365 | # that if the requested package is in the current dir, nose bails early |
|
358 | 366 | # by default. Since it's otherwise harmless, leave it in by default |
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359 | 367 | # for nose >= 0.11, though unfortunately nose 0.10 doesn't support it. |
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360 | 368 | argv.append('--traverse-namespace') |
|
361 | 369 | |
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362 | 370 | # use our plugin for doctesting. It will remove the standard doctest plugin |
|
363 | 371 | # if it finds it enabled |
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364 | 372 | plugins = [IPythonDoctest(make_exclude()), KnownFailure()] |
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365 | 373 | # We need a global ipython running in this process |
|
366 | 374 | globalipapp.start_ipython() |
|
367 | 375 | # Now nose can run |
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368 | 376 | TestProgram(argv=argv, addplugins=plugins) |
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369 | 377 | |
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370 | 378 | |
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371 | 379 | def run_iptestall(): |
|
372 | 380 | """Run the entire IPython test suite by calling nose and trial. |
|
373 | 381 | |
|
374 | 382 | This function constructs :class:`IPTester` instances for all IPython |
|
375 | 383 | modules and package and then runs each of them. This causes the modules |
|
376 | 384 | and packages of IPython to be tested each in their own subprocess using |
|
377 | 385 | nose or twisted.trial appropriately. |
|
378 | 386 | """ |
|
379 | 387 | |
|
380 | 388 | runners = make_runners() |
|
381 | 389 | |
|
382 | 390 | # Run the test runners in a temporary dir so we can nuke it when finished |
|
383 | 391 | # to clean up any junk files left over by accident. This also makes it |
|
384 | 392 | # robust against being run in non-writeable directories by mistake, as the |
|
385 | 393 | # temp dir will always be user-writeable. |
|
386 | 394 | curdir = os.getcwdu() |
|
387 | 395 | testdir = tempfile.gettempdir() |
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388 | 396 | os.chdir(testdir) |
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389 | 397 | |
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390 | 398 | # Run all test runners, tracking execution time |
|
391 | 399 | failed = [] |
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392 | 400 | t_start = time.time() |
|
393 | 401 | try: |
|
394 | 402 | for (name, runner) in runners: |
|
395 | 403 | print '*'*70 |
|
396 | 404 | print 'IPython test group:',name |
|
397 | 405 | res = runner.run() |
|
398 | 406 | if res: |
|
399 | 407 | failed.append( (name, runner) ) |
|
400 | 408 | finally: |
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401 | 409 | os.chdir(curdir) |
|
402 | 410 | t_end = time.time() |
|
403 | 411 | t_tests = t_end - t_start |
|
404 | 412 | nrunners = len(runners) |
|
405 | 413 | nfail = len(failed) |
|
406 | 414 | # summarize results |
|
407 | 415 | |
|
408 | 416 | print '*'*70 |
|
409 | 417 | print 'Test suite completed for system with the following information:' |
|
410 | 418 | print report() |
|
411 | 419 | print 'Ran %s test groups in %.3fs' % (nrunners, t_tests) |
|
412 | 420 | |
|
413 | 421 | print 'Status:' |
|
414 | 422 | if not failed: |
|
415 | 423 | print 'OK' |
|
416 | 424 | else: |
|
417 | 425 | # If anything went wrong, point out what command to rerun manually to |
|
418 | 426 | # see the actual errors and individual summary |
|
419 | 427 | print 'ERROR - %s out of %s test groups failed.' % (nfail, nrunners) |
|
420 | 428 | for name, failed_runner in failed: |
|
421 | 429 | print '-'*40 |
|
422 | 430 | print 'Runner failed:',name |
|
423 | 431 | print 'You may wish to rerun this one individually, with:' |
|
424 | 432 | print ' '.join(failed_runner.call_args) |
|
425 | 433 | |
|
426 | 434 | # Ensure that our exit code indicates failure |
|
427 | 435 | sys.exit(1) |
|
428 | 436 | |
|
429 | 437 | |
|
430 | 438 | def main(): |
|
431 | 439 | for arg in sys.argv[1:]: |
|
432 | 440 | if arg.startswith('IPython'): |
|
433 | 441 | # This is in-process |
|
434 | 442 | run_iptest() |
|
435 | 443 | else: |
|
436 | 444 | # This starts subprocesses |
|
437 | 445 | run_iptestall() |
|
438 | 446 | |
|
439 | 447 | |
|
440 | 448 | if __name__ == '__main__': |
|
441 | 449 | main() |
@@ -1,403 +1,401 b'' | |||
|
1 | 1 | Overview |
|
2 | 2 | ======== |
|
3 | 3 | |
|
4 | 4 | This document describes the steps required to install IPython. IPython is |
|
5 | 5 | organized into a number of subpackages, each of which has its own dependencies. |
|
6 | 6 | All of the subpackages come with IPython, so you don't need to download and |
|
7 | 7 | install them separately. However, to use a given subpackage, you will need to |
|
8 | 8 | install all of its dependencies. |
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9 | 9 | |
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10 | 10 | |
|
11 | 11 | Please let us know if you have problems installing IPython or any of its |
|
12 | 12 | dependencies. Officially, IPython requires Python version 2.6 or 2.7. There |
|
13 | 13 | is an experimental port of IPython for Python3 `on GitHub |
|
14 | 14 | <https://github.com/ipython/ipython-py3k>`_ |
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15 | 15 | |
|
16 | 16 | .. warning:: |
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17 | 17 | |
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18 | 18 | Officially, IPython supports Python versions 2.6 and 2.7. |
|
19 | 19 | |
|
20 | 20 | IPython 0.11 has a hard syntax dependency on 2.6, and will no longer work |
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21 | 21 | on Python <= 2.5. |
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22 | 22 | |
|
23 | 23 | Some of the installation approaches use the :mod:`setuptools` package and its |
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24 | 24 | :command:`easy_install` command line program. In many scenarios, this provides |
|
25 | 25 | the most simple method of installing IPython and its dependencies. It is not |
|
26 | 26 | required though. More information about :mod:`setuptools` can be found on its |
|
27 | 27 | website. |
|
28 | 28 | |
|
29 | 29 | .. note:: |
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30 | 30 | |
|
31 | 31 | On Windows, IPython *does* depend on :mod:`setuptools`, and it is recommended |
|
32 | 32 | that you install the :mod:`distribute` package, which improves |
|
33 | 33 | :mod:`setuptools` and fixes various bugs. |
|
34 | 34 | |
|
35 | 35 | We hope to remove this dependency in 0.12. |
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36 | 36 | |
|
37 | 37 | More general information about installing Python packages can be found in |
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38 | 38 | Python's documentation at http://www.python.org/doc/. |
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39 | 39 | |
|
40 | 40 | Quickstart |
|
41 | 41 | ========== |
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42 | 42 | |
|
43 | 43 | If you have :mod:`setuptools` installed and you are on OS X or Linux (not |
|
44 | 44 | Windows), the following will download and install IPython *and* the main |
|
45 | 45 | optional dependencies: |
|
46 | 46 | |
|
47 | 47 | .. code-block:: bash |
|
48 | 48 | |
|
49 | 49 | $ easy_install ipython[zmq,test] |
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50 | 50 | |
|
51 | 51 | This will get pyzmq, which is needed for |
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52 | 52 | IPython's parallel computing features as well as the nose package, which will |
|
53 | 53 | enable you to run IPython's test suite. |
|
54 | 54 | |
|
55 | 55 | To run IPython's test suite, use the :command:`iptest` command: |
|
56 | 56 | |
|
57 | 57 | .. code-block:: bash |
|
58 | 58 | |
|
59 | 59 | $ iptest |
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60 | 60 | |
|
61 | 61 | Read on for more specific details and instructions for Windows. |
|
62 | 62 | |
|
63 | 63 | Installing IPython itself |
|
64 | 64 | ========================= |
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65 | 65 | |
|
66 | 66 | Given a properly built Python, the basic interactive IPython shell will work |
|
67 | 67 | with no external dependencies. However, some Python distributions |
|
68 | 68 | (particularly on Windows and OS X), don't come with a working :mod:`readline` |
|
69 | 69 | module. The IPython shell will work without :mod:`readline`, but will lack |
|
70 | 70 | many features that users depend on, such as tab completion and command line |
|
71 | 71 | editing. If you install IPython with :mod:`setuptools`, (e.g. with `easy_install`), |
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72 | 72 | then the appropriate :mod:`readline` for your platform will be installed. |
|
73 | 73 | See below for details of how to make sure you have a working :mod:`readline`. |
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74 | 74 | |
|
75 | 75 | Installation using easy_install |
|
76 | 76 | ------------------------------- |
|
77 | 77 | |
|
78 | 78 | If you have :mod:`setuptools` installed, the easiest way of getting IPython is |
|
79 | 79 | to simple use :command:`easy_install`: |
|
80 | 80 | |
|
81 | 81 | .. code-block:: bash |
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82 | 82 | |
|
83 | 83 | $ easy_install ipython |
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84 | 84 | |
|
85 | 85 | That's it. |
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86 | 86 | |
|
87 | 87 | Installation from source |
|
88 | 88 | ------------------------ |
|
89 | 89 | |
|
90 | 90 | If you don't want to use :command:`easy_install`, or don't have it installed, |
|
91 | 91 | just grab the latest stable build of IPython from `here |
|
92 | 92 | <https://github.com/ipython/ipython/downloads>`_. Then do the following: |
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93 | 93 | |
|
94 | 94 | .. code-block:: bash |
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95 | 95 | |
|
96 | 96 | $ tar -xzf ipython.tar.gz |
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97 | 97 | $ cd ipython |
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98 | 98 | $ python setup.py install |
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99 | 99 | |
|
100 | 100 | If you are installing to a location (like ``/usr/local``) that requires higher |
|
101 | 101 | permissions, you may need to run the last command with :command:`sudo`. |
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102 | 102 | |
|
103 | 103 | Windows |
|
104 | 104 | ------- |
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105 | 105 | |
|
106 | 106 | .. note:: |
|
107 | 107 | |
|
108 | 108 | On Windows, IPython requires :mod:`setuptools` or :mod:`distribute`. |
|
109 | 109 | |
|
110 | 110 | We hope to remove this dependency in 0.12. |
|
111 | 111 | |
|
112 | 112 | There are a few caveats for Windows users. The main issue is that a basic |
|
113 | 113 | ``python setup.py install`` approach won't create ``.bat`` file or Start Menu |
|
114 | 114 | shortcuts, which most users want. To get an installation with these, you can |
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115 | 115 | use any of the following alternatives: |
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116 | 116 | |
|
117 | 117 | 1. Install using :command:`easy_install`. |
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118 | 118 | |
|
119 | 119 | 2. Install using our binary ``.exe`` Windows installer, which can be found |
|
120 | 120 | `here <http://ipython.scipy.org/dist/>`_ |
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121 | 121 | |
|
122 | 122 | 3. Install from source, but using :mod:`setuptools` (``python setupegg.py |
|
123 | 123 | install``). |
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124 | 124 | |
|
125 | 125 | IPython by default runs in a terminal window, but the normal terminal |
|
126 | 126 | application supplied by Microsoft Windows is very primitive. You may want to |
|
127 | 127 | download the excellent and free Console_ application instead, which is a far |
|
128 | 128 | superior tool. You can even configure Console to give you by default an |
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129 | 129 | IPython tab, which is very convenient to create new IPython sessions directly |
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130 | 130 | from the working terminal. |
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131 | 131 | |
|
132 | 132 | .. _Console: http://sourceforge.net/projects/console |
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133 | 133 | |
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134 | 134 | Note for Windows 64 bit users: you may have difficulties with the stock |
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135 | 135 | installer on 64 bit systems; in this case (since we currently do not have 64 |
|
136 | 136 | bit builds of the Windows installer) your best bet is to install from source |
|
137 | 137 | with the setuptools method indicated in #3 above. See `this bug report`_ for |
|
138 | 138 | further details. |
|
139 | 139 | |
|
140 | 140 | .. _this bug report: https://bugs.launchpad.net/ipython/+bug/382214 |
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141 | 141 | |
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142 | 142 | |
|
143 | 143 | Installing the development version |
|
144 | 144 | ---------------------------------- |
|
145 | 145 | |
|
146 | 146 | It is also possible to install the development version of IPython from our |
|
147 | 147 | `Git <http://git-scm.com/>`_ source code repository. To do this you will |
|
148 | 148 | need to have Git installed on your system. Then just do: |
|
149 | 149 | |
|
150 | 150 | .. code-block:: bash |
|
151 | 151 | |
|
152 | 152 | $ git clone https://github.com/ipython/ipython.git |
|
153 | 153 | $ cd ipython |
|
154 | 154 | $ python setup.py install |
|
155 | 155 | |
|
156 | 156 | Again, this last step on Windows won't create ``.bat`` files or Start Menu |
|
157 | 157 | shortcuts, so you will have to use one of the other approaches listed above. |
|
158 | 158 | |
|
159 | 159 | Some users want to be able to follow the development branch as it changes. If |
|
160 | 160 | you have :mod:`setuptools` installed, this is easy. Simply replace the last |
|
161 | 161 | step by: |
|
162 | 162 | |
|
163 | 163 | .. code-block:: bash |
|
164 | 164 | |
|
165 | 165 | $ python setupegg.py develop |
|
166 | 166 | |
|
167 | 167 | This creates links in the right places and installs the command line script to |
|
168 | 168 | the appropriate places. Then, if you want to update your IPython at any time, |
|
169 | 169 | just do: |
|
170 | 170 | |
|
171 | 171 | .. code-block:: bash |
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172 | 172 | |
|
173 | 173 | $ git pull |
|
174 | 174 | |
|
175 | 175 | Basic optional dependencies |
|
176 | 176 | =========================== |
|
177 | 177 | |
|
178 | 178 | There are a number of basic optional dependencies that most users will want to |
|
179 | 179 | get. These are: |
|
180 | 180 | |
|
181 | 181 | * readline (for command line editing, tab completion, etc.) |
|
182 | 182 | * nose (to run the IPython test suite) |
|
183 | 183 | * pexpect (to use things like irunner) |
|
184 | 184 | |
|
185 | 185 | If you are comfortable installing these things yourself, have at it, otherwise |
|
186 | 186 | read on for more details. |
|
187 | 187 | |
|
188 | 188 | readline |
|
189 | 189 | -------- |
|
190 | 190 | |
|
191 | 191 | In principle, all Python distributions should come with a working |
|
192 | 192 | :mod:`readline` module. But, reality is not quite that simple. There are two |
|
193 | 193 | common situations where you won't have a working :mod:`readline` module: |
|
194 | 194 | |
|
195 | 195 | * If you are using the built-in Python on Mac OS X. |
|
196 | 196 | |
|
197 | 197 | * If you are running Windows, which doesn't have a :mod:`readline` module. |
|
198 | 198 | |
|
199 | 199 | When IPython is installed with :mod:`setuptools`, (e.g. with `easy_install`), |
|
200 | 200 | readline is added as a dependency on OS X, and PyReadline on Windows, and will |
|
201 | 201 | be installed on your system. However, if you do not use setuptools, you may |
|
202 | 202 | have to install one of these packages yourself. |
|
203 | 203 | |
|
204 | 204 | On OS X, the built-in Python doesn't not have :mod:`readline` because of |
|
205 | 205 | license issues. Starting with OS X 10.5 (Leopard), Apple's built-in Python has |
|
206 | 206 | a BSD-licensed not-quite-compatible readline replacement. As of IPython 0.9, |
|
207 | 207 | many of the issues related to the differences between readline and libedit seem |
|
208 | 208 | to have been resolved. While you may find libedit sufficient, we have |
|
209 | 209 | occasional reports of bugs with it and several developers who use OS X as their |
|
210 | 210 | main environment consider libedit unacceptable for productive, regular use with |
|
211 | 211 | IPython. |
|
212 | 212 | |
|
213 | 213 | Therefore, we *strongly* recommend that on OS X you get the full |
|
214 | 214 | :mod:`readline` module. We will *not* consider completion/history problems to |
|
215 | 215 | be bugs for IPython if you are using libedit. |
|
216 | 216 | |
|
217 | 217 | To get a working :mod:`readline` module, just do (with :mod:`setuptools` |
|
218 | 218 | installed): |
|
219 | 219 | |
|
220 | 220 | .. code-block:: bash |
|
221 | 221 | |
|
222 | 222 | $ easy_install readline |
|
223 | 223 | |
|
224 | 224 | .. note:: |
|
225 | 225 | |
|
226 | 226 | Other Python distributions on OS X (such as fink, MacPorts and the official |
|
227 | 227 | python.org binaries) already have readline installed so you likely don't |
|
228 | 228 | have to do this step. |
|
229 | 229 | |
|
230 | 230 | If needed, the readline egg can be build and installed from source (see the |
|
231 | 231 | wiki page at http://ipython.scipy.org/moin/InstallationOSXLeopard). |
|
232 | 232 | |
|
233 | 233 | On Windows, you will need the PyReadline module. PyReadline is a separate, |
|
234 | 234 | Windows only implementation of readline that uses native Windows calls through |
|
235 | 235 | :mod:`ctypes`. The easiest way of installing PyReadline is you use the binary |
|
236 | 236 | installer available `here <https://launchpad.net/pyreadline/+download>`_. |
|
237 | 237 | |
|
238 | 238 | nose |
|
239 | 239 | ---- |
|
240 | 240 | |
|
241 | 241 | To run the IPython test suite you will need the :mod:`nose` package. Nose |
|
242 | 242 | provides a great way of sniffing out and running all of the IPython tests. The |
|
243 | 243 | simplest way of getting nose, is to use :command:`easy_install`: |
|
244 | 244 | |
|
245 | 245 | .. code-block:: bash |
|
246 | 246 | |
|
247 | 247 | $ easy_install nose |
|
248 | 248 | |
|
249 | 249 | Another way of getting this is to do: |
|
250 | 250 | |
|
251 | 251 | .. code-block:: bash |
|
252 | 252 | |
|
253 | 253 | $ easy_install ipython[test] |
|
254 | 254 | |
|
255 | 255 | For more installation options, see the `nose website |
|
256 | 256 | <http://somethingaboutorange.com/mrl/projects/nose/>`_. |
|
257 | 257 | |
|
258 | 258 | Once you have nose installed, you can run IPython's test suite using the |
|
259 | 259 | iptest command: |
|
260 | 260 | |
|
261 | 261 | .. code-block:: bash |
|
262 | 262 | |
|
263 | 263 | $ iptest |
|
264 | 264 | |
|
265 | 265 | pexpect |
|
266 | 266 | ------- |
|
267 | 267 | |
|
268 | 268 | The pexpect_ package is used in IPython's :command:`irunner` script, as well as |
|
269 | 269 | for managing subprocesses. IPython now includes a version of pexpect in |
|
270 | 270 | :mod:`IPython.external`, but if you have installed pexpect, IPython will use |
|
271 | 271 | that instead. On Unix platforms (including OS X), just do: |
|
272 | 272 | |
|
273 | 273 | .. code-block:: bash |
|
274 | 274 | |
|
275 | 275 | $ easy_install pexpect |
|
276 | 276 | |
|
277 | 277 | Windows users are out of luck as pexpect does not run there. |
|
278 | 278 | |
|
279 | 279 | Dependencies for IPython.parallel (parallel computing) |
|
280 | 280 | ====================================================== |
|
281 | 281 | |
|
282 | 282 | :mod:`IPython.kernel` has been replaced by :mod:`IPython.parallel`, |
|
283 | 283 | which uses ZeroMQ for all communication. |
|
284 | 284 | |
|
285 | 285 | IPython.parallel provides a nice architecture for parallel computing. The |
|
286 | 286 | main focus of this architecture is on interactive parallel computing. These |
|
287 | 287 | features require just one package: PyZMQ. See the next section for PyZMQ |
|
288 | 288 | details. |
|
289 | 289 | |
|
290 | 290 | On a Unix style platform (including OS X), if you want to use |
|
291 | 291 | :mod:`setuptools`, you can just do: |
|
292 | 292 | |
|
293 | 293 | .. code-block:: bash |
|
294 | 294 | |
|
295 | 295 | $ easy_install ipython[zmq] # will include pyzmq |
|
296 | 296 | |
|
297 | 297 | Security in IPython.parallel is provided by SSH tunnels. By default, Linux |
|
298 | 298 | and OSX clients will use the shell ssh command, but on Windows, we also |
|
299 | 299 | support tunneling with paramiko_. |
|
300 | 300 | |
|
301 | 301 | Dependencies for IPython.zmq |
|
302 | 302 | ============================ |
|
303 | 303 | |
|
304 | 304 | pyzmq |
|
305 | 305 | ----- |
|
306 | 306 | |
|
307 | 307 | IPython 0.11 introduced some new functionality, including a two-process |
|
308 | 308 | execution model using ZeroMQ_ for communication. The Python bindings to ZeroMQ |
|
309 | 309 | are found in the PyZMQ_ project, which is easy_install-able once you have |
|
310 | 310 | ZeroMQ installed. If you are on Python 2.6 or 2.7 on OSX, or 2.7 on Windows, |
|
311 | 311 | pyzmq has eggs that include ZeroMQ itself. |
|
312 | 312 | |
|
313 | 313 | IPython.zmq depends on pyzmq >= 2.1.4. |
|
314 | 314 | |
|
315 | 315 | Dependencies for the IPython QT console |
|
316 | 316 | ======================================= |
|
317 | 317 | |
|
318 | 318 | pyzmq |
|
319 | 319 | ----- |
|
320 | 320 | |
|
321 | 321 | Like the :mod:`IPython.parallel` package, the QT Console requires ZeroMQ and |
|
322 | 322 | PyZMQ. |
|
323 | 323 | |
|
324 | 324 | Qt |
|
325 | 325 | -- |
|
326 | 326 | |
|
327 | 327 | Also with 0.11, a new GUI was added using the work in :mod:`IPython.zmq`, which |
|
328 | 328 | can be launched with ``ipython qtconsole``. The GUI is built on Qt, and works |
|
329 | 329 | with either PyQt, which can be installed from the `PyQt website |
|
330 | 330 | <http://www.riverbankcomputing.co.uk/>`_, or `PySide |
|
331 | 331 | <http://www.pyside.org/>`_, from Nokia. |
|
332 | 332 | |
|
333 | 333 | pygments |
|
334 | 334 | -------- |
|
335 | 335 | |
|
336 | 336 | The syntax-highlighting in ``ipython qtconsole`` is done with the pygments_ |
|
337 | 337 | project, which is easy_install-able. |
|
338 | 338 | |
|
339 | .. _installnotebook: | |
|
339 | 340 | |
|
340 | 341 | Dependencies for the IPython HTML notebook |
|
341 | 342 | ========================================== |
|
342 | 343 | |
|
343 | 344 | The IPython notebook is a notebook-style web interface to IPython and can be |
|
344 | 345 | started withe command ``ipython notebook``. |
|
345 | 346 | |
|
346 | 347 | pyzmq |
|
347 | 348 | ----- |
|
348 | 349 | |
|
349 | 350 | Like the :mod:`IPython.parallel` and :mod:`IPython.frontend.qt.console` packages, |
|
350 | 351 | the HTML notebook requires ZeroMQ and PyZMQ. |
|
351 | 352 | |
|
352 | 353 | Tornado |
|
353 | 354 | ------- |
|
354 | 355 | |
|
355 |
The IPython notebook uses the Tornado_ project for its HTTP server. |
|
|
356 | writing, we require a development version from github, as version 2.0 is *not | |
|
357 | sufficient*. You can either clone their git repository yourself and install it | |
|
358 | manually, or install directly from github with:: | |
|
356 | The IPython notebook uses the Tornado_ project for its HTTP server. Tornado 2.1 | |
|
357 | is required, in order to support current versions of browsers, due to an update | |
|
358 | to the websocket protocol. | |
|
359 | 359 | |
|
360 | easy_install https://github.com/facebook/tornado/tarball/master | |
|
361 | 360 | |
|
362 | ||
|
363 | 361 | MathJax |
|
364 | 362 | ------- |
|
365 | 363 | |
|
366 | 364 | The IPython notebook uses the MathJax_ Javascript library for rendering LaTeX |
|
367 | 365 | in web browsers. Because MathJax is large, we don't include it with |
|
368 | 366 | IPython. Normally IPython will load MathJax from a CDN, but if you have a slow |
|
369 | 367 | network connection, or want to use LaTeX without an internet connection at all, |
|
370 | 368 | we do include a utility to aid in downloading MathJax and installing it into |
|
371 | 369 | the proper location:: |
|
372 | 370 | |
|
373 | 371 | from IPython.external.mathjax import install_mathjax |
|
374 | 372 | install_mathjax() |
|
375 | 373 | |
|
376 | 374 | This function does require write access to the IPython install directory, so if you |
|
377 | 375 | have a system-wide Python install, it may need to be done from a ``sudo python`` session. |
|
378 | 376 | |
|
379 | 377 | Browser Compatibility |
|
380 | 378 | --------------------- |
|
381 | 379 | |
|
382 | 380 | The notebook uses WebSockets and the flexible box model. These features are |
|
383 | 381 | available in the following browsers: |
|
384 | 382 | |
|
385 | 383 | * Chrome. |
|
386 | 384 | * Safari. |
|
387 | 385 | * Firefox 4 and 5. These browsers have WebSocket support, but it is disabled by |
|
388 | 386 | default. You can enable it by entering ``about:config`` in the URL bar and then |
|
389 | 387 | setting ``network.websocket.enabled`` and ``network.websocket.override-security-block`` |
|
390 | 388 | to ``true``. |
|
391 | 389 | * Firefox 6. Starting with version 6, Firefox has WebSocket support enabled by default. |
|
392 | 390 | |
|
393 | 391 | Internet Explorer 9 does not support WebSockets or the flexible box model, but |
|
394 | 392 | these features should appear in Internet Explorer 10. |
|
395 | 393 | |
|
396 | 394 | |
|
397 | 395 | .. _ZeroMQ: http://www.zeromq.org |
|
398 | 396 | .. _PyZMQ: https://github.com/zeromq/pyzmq |
|
399 | 397 | .. _paramiko: https://github.com/robey/paramiko |
|
400 | 398 | .. _pygments: http://pygments.org |
|
401 | 399 | .. _pexpect: http://www.noah.org/wiki/Pexpect |
|
402 | 400 | .. _Tornado: http://www.tornadoweb.org |
|
403 | 401 | .. _MathJax: http://www.mathjax.org |
@@ -1,213 +1,217 b'' | |||
|
1 | 1 | .. _htmlnotebook: |
|
2 | 2 | |
|
3 | 3 | ========================= |
|
4 | 4 | An HTML Notebook IPython |
|
5 | 5 | ========================= |
|
6 | 6 | |
|
7 | .. seealso:: | |
|
8 | ||
|
9 | :ref:`Installation requirements <installnotebook>` for the Notebook. | |
|
10 | ||
|
7 | 11 | The IPython Notebook consists of two related components: |
|
8 | 12 | |
|
9 | 13 | * An JSON based Notebook document format for recording and distributing |
|
10 | 14 | Python code and rich text. |
|
11 | 15 | * A web-based user interface for authoring and running notebook documents. |
|
12 | 16 | |
|
13 | 17 | The Notebook can be used by starting the Notebook server with the |
|
14 | 18 | command:: |
|
15 | 19 | |
|
16 | 20 | $ ipython notebook |
|
17 | 21 | |
|
18 | 22 | Note that by default, the notebook doesn't load pylab, it's just a normal |
|
19 | 23 | IPython session like any other. If you want pylab support, you must use:: |
|
20 | 24 | |
|
21 | 25 | $ ipython notebook --pylab |
|
22 | 26 | |
|
23 | 27 | which will behave similar to the terminal and Qt console versions, using your |
|
24 | 28 | default matplotlib backend and providing floating interactive plot windows. If |
|
25 | 29 | you want inline figures, you must manually select the ``inline`` backend:: |
|
26 | 30 | |
|
27 | 31 | $ ipython notebook --pylab=inline |
|
28 | 32 | |
|
29 | 33 | You can start the notebook to communicate via a secure protocol mode using a |
|
30 | 34 | self-signed certificate by typing:: |
|
31 | 35 | |
|
32 | 36 | $ ipython notebook --certfile=mycert.pem |
|
33 | 37 | |
|
34 | 38 | .. note:: |
|
35 | 39 | |
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36 | 40 | A self-signed certificate can be generated with openssl. For example: |
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37 | 41 | |
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38 | 42 | openssl req -x509 -nodes -days 365 -newkey rsa:1024 -keyout mycert.pem -out mycert.pem |
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39 | 43 | |
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40 | 44 | This server uses the same ZeroMQ-based two process kernel architecture as |
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41 | 45 | the QT Console as well Tornado for serving HTTP/S requests. Some of the main |
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42 | 46 | features of the Notebook include: |
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43 | 47 | |
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44 | 48 | * Display rich data (png/html/latex/svg) in the browser as a result of |
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45 | 49 | computations. |
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46 | 50 | * Compose text cells using HTML and Markdown. |
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47 | 51 | * Import and export notebook documents in range of formats (.ipynb, .py). |
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48 | 52 | * In browser syntax highlighting, tab completion and autoindentation. |
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49 | 53 | * Inline matplotlib plots that can be stored in Notebook documents and opened |
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50 | 54 | later. |
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51 | 55 | |
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52 | 56 | See :ref:`our installation documentation <install_index>` for directions on |
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53 | 57 | how to install the notebook and its dependencies. |
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54 | 58 | |
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55 | 59 | .. note:: |
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56 | 60 | |
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57 | 61 | You can start more than one notebook server at the same time, if you want to |
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58 | 62 | work on notebooks in different directories. By default the first notebook |
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59 | 63 | server starts in port 8888, later notebooks search for random ports near |
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60 | 64 | that one. You can also manually specify the port with the ``--port`` |
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61 | 65 | option. |
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62 | 66 | |
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63 | 67 | |
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64 | 68 | Basic Usage |
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65 | 69 | =========== |
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66 | 70 | |
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67 | 71 | The landing page of the notebook server application, which we call the IPython |
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68 | 72 | Notebook *dashboard*, shows the notebooks currently available in the directory |
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69 | 73 | in which the application was started, and allows you to create new notebooks. |
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70 | 74 | |
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71 | 75 | A notebook is a combination of two things: |
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72 | 76 | |
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73 | 77 | 1. An interactive session connected to an IPython kernel, controlled by a web |
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74 | 78 | application that can send input to the console and display many types of output |
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75 | 79 | (text, graphics, mathematics and more). This is the same kernel used by the |
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76 | 80 | :ref:`Qt console <qtconsole>`, but in this case the web console sends input in |
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77 | 81 | persistent cells that you can edit in-place instead of the vertically scrolling |
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78 | 82 | terminal style used by the Qt console. |
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79 | 83 | |
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80 | 84 | 2. A document that can save the inputs and outputs of the session as well as |
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81 | 85 | additional text that accompanies the code but is not meant for execution. In |
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82 | 86 | this way, notebook files serve as a complete computational record of a session |
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83 | 87 | including explanatory text and mathematics, code and resulting figures. These |
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84 | 88 | documents are internally JSON files and are saved with the ``.ipynb`` |
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85 | 89 | extension. |
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86 | 90 | |
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87 | 91 | If you have ever used the Mathematica or Sage notebooks (the latter is also |
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88 | 92 | web-based__) you should feel right at home. If you have not, you should be |
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89 | 93 | able to learn how to use it in just a few minutes. |
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90 | 94 | |
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91 | 95 | .. __: http://sagenb.org |
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92 | 96 | |
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93 | 97 | |
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94 | 98 | Creating and editing notebooks |
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95 | 99 | ------------------------------ |
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96 | 100 | |
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97 | 101 | You can create new notebooks from the dashboard with the ``New Notebook`` |
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98 | 102 | button or open existing ones by clicking on their name. Once in a notebook, |
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99 | 103 | your browser tab will reflect the name of that notebook (prefixed with "IPy:"). |
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100 | 104 | The URL for that notebook is not meant to be human-readable and is *not* |
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101 | 105 | persistent across invocations of the notebook server. |
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102 | 106 | |
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103 | 107 | You can also drag and drop into the area listing files any python file: it |
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104 | 108 | will be imported into a notebook with the same name (but ``.ipynb`` extension) |
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105 | 109 | located in the directory where the notebook server was started. This notebook |
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106 | 110 | will consist of a single cell with all the code in the file, which you can |
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107 | 111 | later manually partition into individual cells for gradual execution, add text |
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108 | 112 | and graphics, etc. |
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109 | 113 | |
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110 | 114 | Workflow and limitations |
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111 | 115 | ------------------------ |
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112 | 116 | |
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113 | 117 | The normal workflow in a notebook is quite similar to a normal IPython session, |
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114 | 118 | with the difference that you can edit a cell in-place multiple times until you |
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115 | 119 | obtain the desired results rather than having to rerun separate scripts with |
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116 | 120 | the ``%run`` magic (though magics also work in the notebook). Typically |
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117 | 121 | you'll work on a problem in pieces, organizing related pieces into cells and |
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118 | 122 | moving forward as previous parts work correctly. This is much more convenient |
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119 | 123 | for interactive exploration than breaking up a computation into scripts that |
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120 | 124 | must be executed together, especially if parts of them take a long time to run |
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121 | 125 | (you can use tricks with namespaces and ``%run -i``, but we think the notebook |
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122 | 126 | is a more natural solution for that kind of problem). |
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123 | 127 | |
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124 | 128 | The only significant limitation the notebook currently has, compared to the qt |
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125 | 129 | console, is that it can not run any code that expects input from the kernel |
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126 | 130 | (such as scripts that call :func:`raw_input`). Very importantly, this means |
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127 | 131 | that the ``%debug`` magic does *not* work in the notebook! We intend to |
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128 | 132 | correct this limitation, but in the meantime, there is a way to debug problems |
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129 | 133 | in the notebook: you can attach a Qt console to your existing notebook kernel, |
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130 | 134 | and run ``%debug`` from the Qt console. Simply look for the lines in the |
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131 | 135 | terminal where you started the kernel that read something like:: |
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132 | 136 | |
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133 | 137 | [IPKernelApp] To connect another client to this kernel, use: |
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134 | 138 | [IPKernelApp] --existing --shell=53328 --iopub=53817 --stdin=34736 --hb=45543 |
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135 | 139 | |
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136 | 140 | and then start a qt console pointing to that kernel:: |
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137 | 141 | |
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138 | 142 | ipython qtconsole --existing --shell=53328 --iopub=53817 --stdin=34736 --hb=45543 |
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139 | 143 | |
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140 | 144 | |
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141 | 145 | Text input |
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142 | 146 | ---------- |
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143 | 147 | |
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144 | 148 | In addition to code cells and the output they procude (such as figures), you |
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145 | 149 | can also type text not meant for execution. To type text, change the type of a |
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146 | 150 | cell from ``Code`` to ``Markdown`` by using the button or the :kbd:`Ctrl-m m` |
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147 | 151 | keybinding (see below). You can then type any text in Markdown_ syntax, as |
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148 | 152 | well as mathematical expressions if you use ``$...$`` for inline math or |
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149 | 153 | ``$$...$$`` for displayed math. |
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150 | 154 | |
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151 | 155 | Exporting a notebook |
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152 | 156 | -------------------- |
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153 | 157 | |
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154 | 158 | If you want to provide others with a static HTML or PDF view of your notebook, |
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155 | 159 | use the ``Print`` button. This opens a static view of the document, which you |
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156 | 160 | can print to PDF using your operating system's facilities, or save to a file |
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157 | 161 | with your web browser's 'Save' option (note that typically, this will create |
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158 | 162 | both an html file *and* a directory called `notebook_name_files` next to it |
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159 | 163 | that contains all the necessary style information, so if you intend to share |
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160 | 164 | this, you must send the directory along with the main html file). |
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161 | 165 | |
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162 | 166 | The `Download` button lets you save a notebook file to the Download area |
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163 | 167 | configured by your web browser (particularly useful if you are running the |
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164 | 168 | notebook server on a remote host and need a file locally). The notebook is |
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165 | 169 | saved by default with the ``.ipynb`` extension and the files contain JSON data |
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166 | 170 | that is not meant for human editing or consumption. But you can always export |
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167 | 171 | the input part of a notebook to a plain python script by choosing Python format |
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168 | 172 | in the `Download` drop list. This removes all output and saves the text cells |
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169 | 173 | in comment areas. |
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170 | 174 | |
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171 | 175 | .. warning:: |
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172 | 176 | |
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173 | 177 | While in simple cases you can roundtrip a notebook to Python, edit the |
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174 | 178 | python file and import it back without loss, this is in general *not |
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175 | 179 | guaranteed to work at all*. As the notebook format evolves in complexity, |
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176 | 180 | there will be attributes of the notebook that will not survive a roundtrip |
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177 | 181 | through the Python form. You should think of the Python format as a way to |
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178 | 182 | output a script version of a notebook and the import capabilities as a way |
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179 | 183 | to load existing code to get a notebook started. But the Python version is |
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180 | 184 | *not* an alternate notebook format. |
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181 | 185 | |
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182 | 186 | |
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183 | 187 | Keyboard use |
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184 | 188 | ------------ |
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185 | 189 | |
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186 | 190 | All actions in the notebook can be achieved with the mouse, but we have also |
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187 | 191 | added keyboard shortcuts for the most common ones, so that productive use of |
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188 | 192 | the notebook can be achieved with minimal mouse intervention. The main |
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189 | 193 | key bindings you need to remember are: |
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190 | 194 | |
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191 | 195 | * :kbd:`Shift-Enter`: execute the current cell (similar to the Qt console), |
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192 | 196 | show output (if any) and create a new cell below. Note that in the notebook, |
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193 | 197 | simply using :kbd:`Enter` *never* forces execution, it simply inserts a new |
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194 | 198 | line in the current cell. Therefore, in the notebook you must always use |
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195 | 199 | :kbd:`Shift-Enter` to get execution (or use the mouse and click on the ``Run |
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196 | 200 | Selected`` button). |
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197 | 201 | |
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198 | 202 | * :kbd:`Ctrl-Enter`: execute the current cell in "terminal mode", where any |
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199 | 203 | output is shown but the cursor cursor stays in the current cell, whose input |
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200 | 204 | area is flushed empty. This is convenient to do quick in-place experiments |
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201 | 205 | or query things like filesystem content without creating additional cells you |
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202 | 206 | may not want saved in your notebook. |
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203 | 207 | |
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204 | 208 | * :kbd:`Ctrl-m`: this is the prefix for all other keybindings, which consist |
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205 | 209 | of an additional single letter. Type :kbd:`Ctrl-m h` (that is, the sole |
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206 | 210 | letter :kbd:`h` after :kbd:`Ctrl-m`) and IPython will show you the remaining |
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207 | 211 | available keybindings. |
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208 | 212 | |
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209 | 213 | |
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210 | 214 | Notebook document format |
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211 | 215 | ======================== |
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212 | 216 | |
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213 | 217 |
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