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@@ -1,241 +1,242 b'' | |||
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1 | 1 | import os |
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2 | 2 | |
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3 | 3 | c = get_config() |
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4 | 4 | |
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5 | 5 | #----------------------------------------------------------------------------- |
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6 | 6 | # Select which launchers to use |
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7 | 7 | #----------------------------------------------------------------------------- |
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8 | 8 | |
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9 | 9 | # This allows you to control what method is used to start the controller |
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10 | 10 | # and engines. The following methods are currently supported: |
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11 | 11 | # - Start as a regular process on localhost. |
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12 | 12 | # - Start using mpiexec. |
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13 | 13 | # - Start using the Windows HPC Server 2008 scheduler |
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14 | 14 | # - Start using PBS/SGE |
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15 | 15 | # - Start using SSH |
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16 | 16 | |
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17 | 17 | |
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18 | 18 | # The selected launchers can be configured below. |
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19 | 19 | |
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20 | 20 | # Options are: |
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21 | 21 | # - LocalControllerLauncher |
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22 | 22 | # - MPIExecControllerLauncher |
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23 | 23 | # - PBSControllerLauncher |
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24 | 24 | # - SGEControllerLauncher |
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25 | 25 | # - WindowsHPCControllerLauncher |
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26 | 26 | # c.IPClusterStartApp.controller_launcher = 'IPython.parallel.apps.launcher.LocalControllerLauncher' |
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27 | 27 | # c.IPClusterStartApp.controller_launcher = 'IPython.parallel.apps.launcher.PBSControllerLauncher' |
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28 | 28 | |
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29 | 29 | # Options are: |
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30 | 30 | # - LocalEngineSetLauncher |
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31 | 31 | # - MPIExecEngineSetLauncher |
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32 | 32 | # - PBSEngineSetLauncher |
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33 | 33 | # - SGEEngineSetLauncher |
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34 | 34 | # - WindowsHPCEngineSetLauncher |
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35 | 35 | # c.IPClusterEnginesApp.engine_launcher = 'IPython.parallel.apps.launcher.LocalEngineSetLauncher' |
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36 | 36 | |
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37 | 37 | #----------------------------------------------------------------------------- |
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38 | 38 | # Application configuration |
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39 | 39 | #----------------------------------------------------------------------------- |
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40 | 40 | |
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41 | 41 | # The default number of engines that will be started. This is overridden by |
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42 | 42 | # the -n command line option: "ipcluster start -n 4" |
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43 | 43 | # c.IPClusterEnginesApp.n = 2 |
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44 | 44 | |
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45 | 45 | # Log to a file in cluster_dir/log, otherwise just log to sys.stdout. |
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46 | 46 | # c.BaseParallelApp.log_to_file = False |
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47 | 47 | |
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48 | 48 | # Remove old logs from cluster_dir/log before starting. |
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49 | 49 | # c.BaseParallelApp.clean_logs = True |
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50 | 50 | |
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51 | 51 | # The working directory for the process. The application will use os.chdir |
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52 | 52 | # to change to this directory before starting. |
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53 | 53 | # c.BaseParallelApp.work_dir = os.getcwd() |
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54 | 54 | |
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55 | 55 | |
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56 | 56 | #----------------------------------------------------------------------------- |
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57 | 57 | # Local process launchers |
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58 | 58 | #----------------------------------------------------------------------------- |
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59 | 59 | |
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60 | 60 | # The command line arguments to call the controller with. |
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61 | 61 | # c.LocalControllerLauncher.controller_args = \ |
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62 | 62 | # ['--log-to-file','--log-level', '40'] |
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63 | 63 | |
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64 | 64 | # The working directory for the controller |
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65 | 65 | # c.LocalEngineSetLauncher.work_dir = u'' |
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66 | 66 | |
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67 | 67 | # Command line argument passed to the engines. |
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68 | 68 | # c.LocalEngineSetLauncher.engine_args = ['--log-to-file','--log-level', '40'] |
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69 | 69 | |
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70 | 70 | #----------------------------------------------------------------------------- |
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71 | 71 | # MPIExec launchers |
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72 | 72 | #----------------------------------------------------------------------------- |
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73 | 73 | |
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74 | 74 | # The mpiexec/mpirun command to use in both the controller and engines. |
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75 | 75 | # c.MPIExecLauncher.mpi_cmd = ['mpiexec'] |
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76 | 76 | |
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77 | 77 | # Additional arguments to pass to the actual mpiexec command. |
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78 | 78 | # c.MPIExecLauncher.mpi_args = [] |
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79 | 79 | |
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80 | 80 | # The mpiexec/mpirun command and args can be overridden if they should be different |
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81 | 81 | # for controller and engines. |
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82 | 82 | # c.MPIExecControllerLauncher.mpi_cmd = ['mpiexec'] |
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83 | 83 | # c.MPIExecControllerLauncher.mpi_args = [] |
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84 | 84 | # c.MPIExecEngineSetLauncher.mpi_cmd = ['mpiexec'] |
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85 | 85 | # c.MPIExecEngineSetLauncher.mpi_args = [] |
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86 | 86 | |
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87 | 87 | # The command line argument to call the controller with. |
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88 | 88 | # c.MPIExecControllerLauncher.controller_args = \ |
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89 | 89 | # ['--log-to-file','--log-level', '40'] |
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90 | 90 | |
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91 | 91 | # Command line argument passed to the engines. |
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92 | 92 | # c.MPIExecEngineSetLauncher.engine_args = ['--log-to-file','--log-level', '40'] |
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93 | 93 | |
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94 | 94 | # The default number of engines to start if not given elsewhere. |
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95 | 95 | # c.MPIExecEngineSetLauncher.n = 1 |
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96 | 96 | |
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97 | 97 | #----------------------------------------------------------------------------- |
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98 | 98 | # SSH launchers |
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99 | 99 | #----------------------------------------------------------------------------- |
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100 | 100 | |
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101 | 101 | # ipclusterz can be used to launch controller and engines remotely via ssh. |
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102 | 102 | # Note that currently ipclusterz does not do any file distribution, so if |
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103 | 103 | # machines are not on a shared filesystem, config and json files must be |
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104 | 104 | # distributed. For this reason, the reuse_files defaults to True on an |
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105 | 105 | # ssh-launched Controller. This flag can be overridded by the program_args |
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106 | 106 | # attribute of c.SSHControllerLauncher. |
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107 | 107 | |
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108 | 108 | # set the ssh cmd for launching remote commands. The default is ['ssh'] |
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109 | 109 | # c.SSHLauncher.ssh_cmd = ['ssh'] |
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110 | 110 | |
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111 | 111 | # set the ssh cmd for launching remote commands. The default is ['ssh'] |
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112 | 112 | # c.SSHLauncher.ssh_args = ['tt'] |
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113 | 113 | |
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114 | 114 | # Set the user and hostname for the controller |
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115 | 115 | # c.SSHControllerLauncher.hostname = 'controller.example.com' |
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116 | 116 | # c.SSHControllerLauncher.user = os.environ.get('USER','username') |
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117 | 117 | |
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118 | 118 | # Set the arguments to be passed to ipcontrollerz |
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119 | 119 | # note that remotely launched ipcontrollerz will not get the contents of |
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120 | 120 | # the local ipcontrollerz_config.py unless it resides on the *remote host* |
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121 | 121 | # in the location specified by the --cluster_dir argument. |
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122 | 122 | # c.SSHControllerLauncher.program_args = ['-r', '-ip', '0.0.0.0', '--cluster_dir', '/path/to/cd'] |
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123 | 123 | |
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124 |
# Set the default args passed to ipengine |
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124 | # Set the default args passed to ipengine for SSH launched engines | |
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125 | 125 | # c.SSHEngineSetLauncher.engine_args = ['--mpi', 'mpi4py'] |
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126 | 126 | |
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127 | 127 | # SSH engines are launched as a dict of locations/n-engines. |
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128 | 128 | # if a value is a tuple instead of an int, it is assumed to be of the form |
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129 |
# (n, [args]), setting the arguments to passed to ipengine |
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129 | # (n, [args]), setting the arguments to passed to ipengine on `host`. | |
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130 | 130 | # otherwise, c.SSHEngineSetLauncher.engine_args will be used as the default. |
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131 | 131 | |
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132 | 132 | # In this case, there will be 3 engines at my.example.com, and |
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133 | 133 | # 2 at you@ipython.scipy.org with a special json connector location. |
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134 | 134 | # c.SSHEngineSetLauncher.engines = {'my.example.com' : 3, |
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135 | 135 | # 'you@ipython.scipy.org' : (2, ['-f', '/path/to/ipcontroller-engine.json']} |
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136 | 136 | # } |
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137 | 137 | |
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138 | 138 | #----------------------------------------------------------------------------- |
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139 | 139 | # Unix batch (PBS) schedulers launchers |
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140 | 140 | #----------------------------------------------------------------------------- |
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141 | 141 | |
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142 | 142 | # SGE and PBS are very similar. All configurables in this section called 'PBS*' |
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143 | 143 | # also exist as 'SGE*'. |
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144 | 144 | |
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145 | 145 | # The command line program to use to submit a PBS job. |
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146 | 146 | # c.PBSLauncher.submit_command = ['qsub'] |
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147 | 147 | |
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148 | 148 | # The command line program to use to delete a PBS job. |
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149 | 149 | # c.PBSLauncher.delete_command = ['qdel'] |
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150 | 150 | |
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151 | 151 | # The PBS queue in which the job should run |
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152 | 152 | # c.PBSLauncher.queue = 'myqueue' |
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153 | 153 | |
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154 | 154 | # A regular expression that takes the output of qsub and find the job id. |
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155 | 155 | # c.PBSLauncher.job_id_regexp = r'\d+' |
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156 | 156 | |
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157 | 157 | # If for some reason the Controller and Engines have different options above, they |
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158 | 158 | # can be set as c.PBSControllerLauncher.<option> etc. |
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159 | 159 | |
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160 | 160 | # PBS and SGE have default templates, but you can specify your own, either as strings |
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161 | 161 | # or from files, as described here: |
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162 | 162 | |
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163 | 163 | # The batch submission script used to start the controller. This is where |
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164 | 164 | # environment variables would be setup, etc. This string is interpreted using |
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165 |
# |
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166 |
# |
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165 | # Python's string formatting. Basically, you can use {queue} for the name | |
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166 | # of the PBS queue, and {profile_dir} for the profile_dir. | |
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167 | 167 | # c.PBSControllerLauncher.batch_template = """ |
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168 | 168 | # #PBS -N ipcontroller |
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169 |
# #PBS -q |
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169 | # #PBS -q {queue} | |
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170 | 170 | # |
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171 | # ipcontrollerz --cluster-dir $cluster_dir | |
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171 | # ipcontroller profile_dir={profile_dir} | |
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172 | 172 | # """ |
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173 | 173 | |
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174 | 174 | # You can also load this template from a file |
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175 | 175 | # c.PBSControllerLauncher.batch_template_file = u"/path/to/my/template.sh" |
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176 | 176 | |
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177 | 177 | # The name of the instantiated batch script that will actually be used to |
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178 | 178 | # submit the job. This will be written to the cluster directory. |
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179 | 179 | # c.PBSControllerLauncher.batch_file_name = u'pbs_controller' |
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180 | 180 | |
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181 | 181 | # The batch submission script used to start the engines. This is where |
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182 | 182 | # environment variables would be setup, etc. This string is interpreted using |
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183 |
# |
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184 | # number of engine and ${cluster_dir} for the cluster_dir. | |
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183 | # Python's string formatting. Basically, you can use {queue} for the name | |
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184 | # of the PBS queue, and {profile_dir} for the profile_dir, and {n} | |
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185 | # for the number of engines. | |
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185 | 186 | # c.PBSEngineSetLauncher.batch_template = """ |
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186 |
# #PBS -N ip |
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187 |
# #PBS -l nprocs= |
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187 | # #PBS -N ipengine | |
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188 | # #PBS -l nprocs={n} | |
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188 | 189 | # |
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189 | # ipenginez --cluster-dir $cluster_dir$s | |
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190 | # ipengine profile_dir={profile_dir} | |
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190 | 191 | # """ |
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191 | 192 | |
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192 | 193 | # You can also load this template from a file |
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193 | 194 | # c.PBSControllerLauncher.batch_template_file = u"/path/to/my/template.sh" |
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194 | 195 | |
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195 | 196 | # The name of the instantiated batch script that will actually be used to |
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196 | 197 | # submit the job. This will be written to the cluster directory. |
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197 | 198 | # c.PBSEngineSetLauncher.batch_file_name = u'pbs_engines' |
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198 | 199 | |
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199 | 200 | |
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200 | 201 | |
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201 | 202 | #----------------------------------------------------------------------------- |
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202 | 203 | # Windows HPC Server 2008 launcher configuration |
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203 | 204 | #----------------------------------------------------------------------------- |
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204 | 205 | |
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205 | 206 | # c.IPControllerJob.job_name = 'IPController' |
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206 | 207 | # c.IPControllerJob.is_exclusive = False |
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207 | 208 | # c.IPControllerJob.username = r'USERDOMAIN\USERNAME' |
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208 | 209 | # c.IPControllerJob.priority = 'Highest' |
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209 | 210 | # c.IPControllerJob.requested_nodes = '' |
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210 | 211 | # c.IPControllerJob.project = 'MyProject' |
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211 | 212 | |
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212 | 213 | # c.IPControllerTask.task_name = 'IPController' |
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213 | 214 | # c.IPControllerTask.controller_cmd = [u'ipcontroller.exe'] |
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214 |
# c.IPControllerTask.controller_args = ['--log-to-file', ' |
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215 | # c.IPControllerTask.controller_args = ['--log-to-file', 'log_level=40'] | |
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215 | 216 | # c.IPControllerTask.environment_variables = {} |
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216 | 217 | |
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217 | 218 | # c.WindowsHPCControllerLauncher.scheduler = 'HEADNODE' |
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218 | 219 | # c.WindowsHPCControllerLauncher.job_file_name = u'ipcontroller_job.xml' |
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219 | 220 | |
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220 | 221 | |
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221 | 222 | # c.IPEngineSetJob.job_name = 'IPEngineSet' |
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222 | 223 | # c.IPEngineSetJob.is_exclusive = False |
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223 | 224 | # c.IPEngineSetJob.username = r'USERDOMAIN\USERNAME' |
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224 | 225 | # c.IPEngineSetJob.priority = 'Highest' |
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225 | 226 | # c.IPEngineSetJob.requested_nodes = '' |
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226 | 227 | # c.IPEngineSetJob.project = 'MyProject' |
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227 | 228 | |
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228 | 229 | # c.IPEngineTask.task_name = 'IPEngine' |
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229 | 230 | # c.IPEngineTask.engine_cmd = [u'ipengine.exe'] |
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230 |
# c.IPEngineTask.engine_args = ['--log-to-file', ' |
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231 | # c.IPEngineTask.engine_args = ['--log-to-file', 'log_level=40'] | |
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231 | 232 | # c.IPEngineTask.environment_variables = {} |
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232 | 233 | |
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233 | 234 | # c.WindowsHPCEngineSetLauncher.scheduler = 'HEADNODE' |
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234 | 235 | # c.WindowsHPCEngineSetLauncher.job_file_name = u'ipengineset_job.xml' |
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235 | 236 | |
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236 | 237 | |
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237 | 238 | |
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238 | 239 | |
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239 | 240 | |
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240 | 241 | |
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241 | 242 |
@@ -1,1070 +1,1067 b'' | |||
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1 | 1 | #!/usr/bin/env python |
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2 | 2 | # encoding: utf-8 |
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3 | 3 | """ |
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4 | 4 | Facilities for launching IPython processes asynchronously. |
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5 | 5 | """ |
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6 | 6 | |
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7 | 7 | #----------------------------------------------------------------------------- |
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8 | 8 | # Copyright (C) 2008-2009 The IPython Development Team |
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9 | 9 | # |
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10 | 10 | # Distributed under the terms of the BSD License. The full license is in |
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11 | 11 | # the file COPYING, distributed as part of this software. |
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12 | 12 | #----------------------------------------------------------------------------- |
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13 | 13 | |
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14 | 14 | #----------------------------------------------------------------------------- |
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15 | 15 | # Imports |
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16 | 16 | #----------------------------------------------------------------------------- |
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17 | 17 | |
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18 | 18 | import copy |
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19 | 19 | import logging |
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20 | 20 | import os |
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21 | 21 | import re |
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22 | 22 | import stat |
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23 | 23 | |
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24 | 24 | # signal imports, handling various platforms, versions |
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25 | 25 | |
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26 | 26 | from signal import SIGINT, SIGTERM |
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27 | 27 | try: |
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28 | 28 | from signal import SIGKILL |
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29 | 29 | except ImportError: |
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30 | 30 | # Windows |
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31 | 31 | SIGKILL=SIGTERM |
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32 | 32 | |
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33 | 33 | try: |
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34 | 34 | # Windows >= 2.7, 3.2 |
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35 | 35 | from signal import CTRL_C_EVENT as SIGINT |
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36 | 36 | except ImportError: |
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37 | 37 | pass |
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38 | 38 | |
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39 | 39 | from subprocess import Popen, PIPE, STDOUT |
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40 | 40 | try: |
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41 | 41 | from subprocess import check_output |
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42 | 42 | except ImportError: |
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43 | 43 | # pre-2.7, define check_output with Popen |
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44 | 44 | def check_output(*args, **kwargs): |
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45 | 45 | kwargs.update(dict(stdout=PIPE)) |
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46 | 46 | p = Popen(*args, **kwargs) |
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47 | 47 | out,err = p.communicate() |
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48 | 48 | return out |
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49 | 49 | |
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50 | 50 | from zmq.eventloop import ioloop |
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51 | 51 | |
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52 | from IPython.external import Itpl | |
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53 | 52 | # from IPython.config.configurable import Configurable |
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54 | 53 | from IPython.utils.traitlets import Any, Int, List, Unicode, Dict, Instance |
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55 | 54 | from IPython.utils.path import get_ipython_module_path |
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56 | 55 | from IPython.utils.process import find_cmd, pycmd2argv, FindCmdError |
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57 | 56 | |
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58 | 57 | from IPython.parallel.factory import LoggingFactory |
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59 | 58 | |
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60 | 59 | from .win32support import forward_read_events |
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61 | 60 | |
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62 | 61 | from .winhpcjob import IPControllerTask, IPEngineTask, IPControllerJob, IPEngineSetJob |
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63 | 62 | |
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64 | 63 | WINDOWS = os.name == 'nt' |
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65 | 64 | |
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66 | 65 | #----------------------------------------------------------------------------- |
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67 | 66 | # Paths to the kernel apps |
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68 | 67 | #----------------------------------------------------------------------------- |
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69 | 68 | |
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70 | 69 | |
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71 | 70 | ipcluster_cmd_argv = pycmd2argv(get_ipython_module_path( |
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72 | 71 | 'IPython.parallel.apps.ipclusterapp' |
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73 | 72 | )) |
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74 | 73 | |
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75 | 74 | ipengine_cmd_argv = pycmd2argv(get_ipython_module_path( |
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76 | 75 | 'IPython.parallel.apps.ipengineapp' |
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77 | 76 | )) |
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78 | 77 | |
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79 | 78 | ipcontroller_cmd_argv = pycmd2argv(get_ipython_module_path( |
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80 | 79 | 'IPython.parallel.apps.ipcontrollerapp' |
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81 | 80 | )) |
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82 | 81 | |
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83 | 82 | #----------------------------------------------------------------------------- |
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84 | 83 | # Base launchers and errors |
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85 | 84 | #----------------------------------------------------------------------------- |
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86 | 85 | |
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87 | 86 | |
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88 | 87 | class LauncherError(Exception): |
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89 | 88 | pass |
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90 | 89 | |
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91 | 90 | |
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92 | 91 | class ProcessStateError(LauncherError): |
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93 | 92 | pass |
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94 | 93 | |
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95 | 94 | |
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96 | 95 | class UnknownStatus(LauncherError): |
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97 | 96 | pass |
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98 | 97 | |
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99 | 98 | |
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100 | 99 | class BaseLauncher(LoggingFactory): |
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101 | 100 | """An asbtraction for starting, stopping and signaling a process.""" |
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102 | 101 | |
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103 | 102 | # In all of the launchers, the work_dir is where child processes will be |
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104 | 103 | # run. This will usually be the profile_dir, but may not be. any work_dir |
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105 | 104 | # passed into the __init__ method will override the config value. |
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106 | 105 | # This should not be used to set the work_dir for the actual engine |
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107 | 106 | # and controller. Instead, use their own config files or the |
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108 | 107 | # controller_args, engine_args attributes of the launchers to add |
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109 | 108 | # the work_dir option. |
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110 | 109 | work_dir = Unicode(u'.') |
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111 | 110 | loop = Instance('zmq.eventloop.ioloop.IOLoop') |
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112 | 111 | |
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113 | 112 | start_data = Any() |
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114 | 113 | stop_data = Any() |
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115 | 114 | |
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116 | 115 | def _loop_default(self): |
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117 | 116 | return ioloop.IOLoop.instance() |
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118 | 117 | |
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119 | 118 | def __init__(self, work_dir=u'.', config=None, **kwargs): |
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120 | 119 | super(BaseLauncher, self).__init__(work_dir=work_dir, config=config, **kwargs) |
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121 | 120 | self.state = 'before' # can be before, running, after |
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122 | 121 | self.stop_callbacks = [] |
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123 | 122 | self.start_data = None |
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124 | 123 | self.stop_data = None |
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125 | 124 | |
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126 | 125 | @property |
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127 | 126 | def args(self): |
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128 | 127 | """A list of cmd and args that will be used to start the process. |
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129 | 128 | |
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130 | 129 | This is what is passed to :func:`spawnProcess` and the first element |
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131 | 130 | will be the process name. |
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132 | 131 | """ |
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133 | 132 | return self.find_args() |
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134 | 133 | |
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135 | 134 | def find_args(self): |
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136 | 135 | """The ``.args`` property calls this to find the args list. |
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137 | 136 | |
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138 | 137 | Subcommand should implement this to construct the cmd and args. |
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139 | 138 | """ |
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140 | 139 | raise NotImplementedError('find_args must be implemented in a subclass') |
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141 | 140 | |
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142 | 141 | @property |
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143 | 142 | def arg_str(self): |
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144 | 143 | """The string form of the program arguments.""" |
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145 | 144 | return ' '.join(self.args) |
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146 | 145 | |
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147 | 146 | @property |
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148 | 147 | def running(self): |
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149 | 148 | """Am I running.""" |
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150 | 149 | if self.state == 'running': |
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151 | 150 | return True |
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152 | 151 | else: |
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153 | 152 | return False |
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154 | 153 | |
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155 | 154 | def start(self): |
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156 | 155 | """Start the process. |
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157 | 156 | |
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158 | 157 | This must return a deferred that fires with information about the |
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159 | 158 | process starting (like a pid, job id, etc.). |
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160 | 159 | """ |
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161 | 160 | raise NotImplementedError('start must be implemented in a subclass') |
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162 | 161 | |
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163 | 162 | def stop(self): |
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164 | 163 | """Stop the process and notify observers of stopping. |
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165 | 164 | |
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166 | 165 | This must return a deferred that fires with information about the |
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167 | 166 | processing stopping, like errors that occur while the process is |
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168 | 167 | attempting to be shut down. This deferred won't fire when the process |
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169 | 168 | actually stops. To observe the actual process stopping, see |
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170 | 169 | :func:`observe_stop`. |
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171 | 170 | """ |
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172 | 171 | raise NotImplementedError('stop must be implemented in a subclass') |
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173 | 172 | |
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174 | 173 | def on_stop(self, f): |
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175 | 174 | """Get a deferred that will fire when the process stops. |
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176 | 175 | |
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177 | 176 | The deferred will fire with data that contains information about |
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178 | 177 | the exit status of the process. |
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179 | 178 | """ |
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180 | 179 | if self.state=='after': |
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181 | 180 | return f(self.stop_data) |
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182 | 181 | else: |
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183 | 182 | self.stop_callbacks.append(f) |
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184 | 183 | |
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185 | 184 | def notify_start(self, data): |
|
186 | 185 | """Call this to trigger startup actions. |
|
187 | 186 | |
|
188 | 187 | This logs the process startup and sets the state to 'running'. It is |
|
189 | 188 | a pass-through so it can be used as a callback. |
|
190 | 189 | """ |
|
191 | 190 | |
|
192 | 191 | self.log.info('Process %r started: %r' % (self.args[0], data)) |
|
193 | 192 | self.start_data = data |
|
194 | 193 | self.state = 'running' |
|
195 | 194 | return data |
|
196 | 195 | |
|
197 | 196 | def notify_stop(self, data): |
|
198 | 197 | """Call this to trigger process stop actions. |
|
199 | 198 | |
|
200 | 199 | This logs the process stopping and sets the state to 'after'. Call |
|
201 | 200 | this to trigger all the deferreds from :func:`observe_stop`.""" |
|
202 | 201 | |
|
203 | 202 | self.log.info('Process %r stopped: %r' % (self.args[0], data)) |
|
204 | 203 | self.stop_data = data |
|
205 | 204 | self.state = 'after' |
|
206 | 205 | for i in range(len(self.stop_callbacks)): |
|
207 | 206 | d = self.stop_callbacks.pop() |
|
208 | 207 | d(data) |
|
209 | 208 | return data |
|
210 | 209 | |
|
211 | 210 | def signal(self, sig): |
|
212 | 211 | """Signal the process. |
|
213 | 212 | |
|
214 | 213 | Return a semi-meaningless deferred after signaling the process. |
|
215 | 214 | |
|
216 | 215 | Parameters |
|
217 | 216 | ---------- |
|
218 | 217 | sig : str or int |
|
219 | 218 | 'KILL', 'INT', etc., or any signal number |
|
220 | 219 | """ |
|
221 | 220 | raise NotImplementedError('signal must be implemented in a subclass') |
|
222 | 221 | |
|
223 | 222 | |
|
224 | 223 | #----------------------------------------------------------------------------- |
|
225 | 224 | # Local process launchers |
|
226 | 225 | #----------------------------------------------------------------------------- |
|
227 | 226 | |
|
228 | 227 | |
|
229 | 228 | class LocalProcessLauncher(BaseLauncher): |
|
230 | 229 | """Start and stop an external process in an asynchronous manner. |
|
231 | 230 | |
|
232 | 231 | This will launch the external process with a working directory of |
|
233 | 232 | ``self.work_dir``. |
|
234 | 233 | """ |
|
235 | 234 | |
|
236 | 235 | # This is used to to construct self.args, which is passed to |
|
237 | 236 | # spawnProcess. |
|
238 | 237 | cmd_and_args = List([]) |
|
239 | 238 | poll_frequency = Int(100) # in ms |
|
240 | 239 | |
|
241 | 240 | def __init__(self, work_dir=u'.', config=None, **kwargs): |
|
242 | 241 | super(LocalProcessLauncher, self).__init__( |
|
243 | 242 | work_dir=work_dir, config=config, **kwargs |
|
244 | 243 | ) |
|
245 | 244 | self.process = None |
|
246 | 245 | self.start_deferred = None |
|
247 | 246 | self.poller = None |
|
248 | 247 | |
|
249 | 248 | def find_args(self): |
|
250 | 249 | return self.cmd_and_args |
|
251 | 250 | |
|
252 | 251 | def start(self): |
|
253 | 252 | if self.state == 'before': |
|
254 | 253 | self.process = Popen(self.args, |
|
255 | 254 | stdout=PIPE,stderr=PIPE,stdin=PIPE, |
|
256 | 255 | env=os.environ, |
|
257 | 256 | cwd=self.work_dir |
|
258 | 257 | ) |
|
259 | 258 | if WINDOWS: |
|
260 | 259 | self.stdout = forward_read_events(self.process.stdout) |
|
261 | 260 | self.stderr = forward_read_events(self.process.stderr) |
|
262 | 261 | else: |
|
263 | 262 | self.stdout = self.process.stdout.fileno() |
|
264 | 263 | self.stderr = self.process.stderr.fileno() |
|
265 | 264 | self.loop.add_handler(self.stdout, self.handle_stdout, self.loop.READ) |
|
266 | 265 | self.loop.add_handler(self.stderr, self.handle_stderr, self.loop.READ) |
|
267 | 266 | self.poller = ioloop.PeriodicCallback(self.poll, self.poll_frequency, self.loop) |
|
268 | 267 | self.poller.start() |
|
269 | 268 | self.notify_start(self.process.pid) |
|
270 | 269 | else: |
|
271 | 270 | s = 'The process was already started and has state: %r' % self.state |
|
272 | 271 | raise ProcessStateError(s) |
|
273 | 272 | |
|
274 | 273 | def stop(self): |
|
275 | 274 | return self.interrupt_then_kill() |
|
276 | 275 | |
|
277 | 276 | def signal(self, sig): |
|
278 | 277 | if self.state == 'running': |
|
279 | 278 | if WINDOWS and sig != SIGINT: |
|
280 | 279 | # use Windows tree-kill for better child cleanup |
|
281 | 280 | check_output(['taskkill', '-pid', str(self.process.pid), '-t', '-f']) |
|
282 | 281 | else: |
|
283 | 282 | self.process.send_signal(sig) |
|
284 | 283 | |
|
285 | 284 | def interrupt_then_kill(self, delay=2.0): |
|
286 | 285 | """Send INT, wait a delay and then send KILL.""" |
|
287 | 286 | try: |
|
288 | 287 | self.signal(SIGINT) |
|
289 | 288 | except Exception: |
|
290 | 289 | self.log.debug("interrupt failed") |
|
291 | 290 | pass |
|
292 | 291 | self.killer = ioloop.DelayedCallback(lambda : self.signal(SIGKILL), delay*1000, self.loop) |
|
293 | 292 | self.killer.start() |
|
294 | 293 | |
|
295 | 294 | # callbacks, etc: |
|
296 | 295 | |
|
297 | 296 | def handle_stdout(self, fd, events): |
|
298 | 297 | if WINDOWS: |
|
299 | 298 | line = self.stdout.recv() |
|
300 | 299 | else: |
|
301 | 300 | line = self.process.stdout.readline() |
|
302 | 301 | # a stopped process will be readable but return empty strings |
|
303 | 302 | if line: |
|
304 | 303 | self.log.info(line[:-1]) |
|
305 | 304 | else: |
|
306 | 305 | self.poll() |
|
307 | 306 | |
|
308 | 307 | def handle_stderr(self, fd, events): |
|
309 | 308 | if WINDOWS: |
|
310 | 309 | line = self.stderr.recv() |
|
311 | 310 | else: |
|
312 | 311 | line = self.process.stderr.readline() |
|
313 | 312 | # a stopped process will be readable but return empty strings |
|
314 | 313 | if line: |
|
315 | 314 | self.log.error(line[:-1]) |
|
316 | 315 | else: |
|
317 | 316 | self.poll() |
|
318 | 317 | |
|
319 | 318 | def poll(self): |
|
320 | 319 | status = self.process.poll() |
|
321 | 320 | if status is not None: |
|
322 | 321 | self.poller.stop() |
|
323 | 322 | self.loop.remove_handler(self.stdout) |
|
324 | 323 | self.loop.remove_handler(self.stderr) |
|
325 | 324 | self.notify_stop(dict(exit_code=status, pid=self.process.pid)) |
|
326 | 325 | return status |
|
327 | 326 | |
|
328 | 327 | class LocalControllerLauncher(LocalProcessLauncher): |
|
329 | 328 | """Launch a controller as a regular external process.""" |
|
330 | 329 | |
|
331 | 330 | controller_cmd = List(ipcontroller_cmd_argv, config=True, |
|
332 | 331 | help="""Popen command to launch ipcontroller.""") |
|
333 | 332 | # Command line arguments to ipcontroller. |
|
334 | 333 | controller_args = List(['--log-to-file','log_level=%i'%logging.INFO], config=True, |
|
335 | 334 | help="""command-line args to pass to ipcontroller""") |
|
336 | 335 | |
|
337 | 336 | def find_args(self): |
|
338 | 337 | return self.controller_cmd + self.controller_args |
|
339 | 338 | |
|
340 | 339 | def start(self, profile_dir): |
|
341 | 340 | """Start the controller by profile_dir.""" |
|
342 | 341 | self.controller_args.extend(['profile_dir=%s'%profile_dir]) |
|
343 | 342 | self.profile_dir = unicode(profile_dir) |
|
344 | 343 | self.log.info("Starting LocalControllerLauncher: %r" % self.args) |
|
345 | 344 | return super(LocalControllerLauncher, self).start() |
|
346 | 345 | |
|
347 | 346 | |
|
348 | 347 | class LocalEngineLauncher(LocalProcessLauncher): |
|
349 | 348 | """Launch a single engine as a regular externall process.""" |
|
350 | 349 | |
|
351 | 350 | engine_cmd = List(ipengine_cmd_argv, config=True, |
|
352 | 351 | help="""command to launch the Engine.""") |
|
353 | 352 | # Command line arguments for ipengine. |
|
354 | 353 | engine_args = List(['--log-to-file','log_level=%i'%logging.INFO], config=True, |
|
355 | 354 | help="command-line arguments to pass to ipengine" |
|
356 | 355 | ) |
|
357 | 356 | |
|
358 | 357 | def find_args(self): |
|
359 | 358 | return self.engine_cmd + self.engine_args |
|
360 | 359 | |
|
361 | 360 | def start(self, profile_dir): |
|
362 | 361 | """Start the engine by profile_dir.""" |
|
363 | 362 | self.engine_args.extend(['profile_dir=%s'%profile_dir]) |
|
364 | 363 | self.profile_dir = unicode(profile_dir) |
|
365 | 364 | return super(LocalEngineLauncher, self).start() |
|
366 | 365 | |
|
367 | 366 | |
|
368 | 367 | class LocalEngineSetLauncher(BaseLauncher): |
|
369 | 368 | """Launch a set of engines as regular external processes.""" |
|
370 | 369 | |
|
371 | 370 | # Command line arguments for ipengine. |
|
372 | 371 | engine_args = List( |
|
373 | 372 | ['--log-to-file','log_level=%i'%logging.INFO], config=True, |
|
374 | 373 | help="command-line arguments to pass to ipengine" |
|
375 | 374 | ) |
|
376 | 375 | # launcher class |
|
377 | 376 | launcher_class = LocalEngineLauncher |
|
378 | 377 | |
|
379 | 378 | launchers = Dict() |
|
380 | 379 | stop_data = Dict() |
|
381 | 380 | |
|
382 | 381 | def __init__(self, work_dir=u'.', config=None, **kwargs): |
|
383 | 382 | super(LocalEngineSetLauncher, self).__init__( |
|
384 | 383 | work_dir=work_dir, config=config, **kwargs |
|
385 | 384 | ) |
|
386 | 385 | self.stop_data = {} |
|
387 | 386 | |
|
388 | 387 | def start(self, n, profile_dir): |
|
389 | 388 | """Start n engines by profile or profile_dir.""" |
|
390 | 389 | self.profile_dir = unicode(profile_dir) |
|
391 | 390 | dlist = [] |
|
392 | 391 | for i in range(n): |
|
393 | 392 | el = self.launcher_class(work_dir=self.work_dir, config=self.config, logname=self.log.name) |
|
394 | 393 | # Copy the engine args over to each engine launcher. |
|
395 | 394 | el.engine_args = copy.deepcopy(self.engine_args) |
|
396 | 395 | el.on_stop(self._notice_engine_stopped) |
|
397 | 396 | d = el.start(profile_dir) |
|
398 | 397 | if i==0: |
|
399 | 398 | self.log.info("Starting LocalEngineSetLauncher: %r" % el.args) |
|
400 | 399 | self.launchers[i] = el |
|
401 | 400 | dlist.append(d) |
|
402 | 401 | self.notify_start(dlist) |
|
403 | 402 | # The consumeErrors here could be dangerous |
|
404 | 403 | # dfinal = gatherBoth(dlist, consumeErrors=True) |
|
405 | 404 | # dfinal.addCallback(self.notify_start) |
|
406 | 405 | return dlist |
|
407 | 406 | |
|
408 | 407 | def find_args(self): |
|
409 | 408 | return ['engine set'] |
|
410 | 409 | |
|
411 | 410 | def signal(self, sig): |
|
412 | 411 | dlist = [] |
|
413 | 412 | for el in self.launchers.itervalues(): |
|
414 | 413 | d = el.signal(sig) |
|
415 | 414 | dlist.append(d) |
|
416 | 415 | # dfinal = gatherBoth(dlist, consumeErrors=True) |
|
417 | 416 | return dlist |
|
418 | 417 | |
|
419 | 418 | def interrupt_then_kill(self, delay=1.0): |
|
420 | 419 | dlist = [] |
|
421 | 420 | for el in self.launchers.itervalues(): |
|
422 | 421 | d = el.interrupt_then_kill(delay) |
|
423 | 422 | dlist.append(d) |
|
424 | 423 | # dfinal = gatherBoth(dlist, consumeErrors=True) |
|
425 | 424 | return dlist |
|
426 | 425 | |
|
427 | 426 | def stop(self): |
|
428 | 427 | return self.interrupt_then_kill() |
|
429 | 428 | |
|
430 | 429 | def _notice_engine_stopped(self, data): |
|
431 | 430 | pid = data['pid'] |
|
432 | 431 | for idx,el in self.launchers.iteritems(): |
|
433 | 432 | if el.process.pid == pid: |
|
434 | 433 | break |
|
435 | 434 | self.launchers.pop(idx) |
|
436 | 435 | self.stop_data[idx] = data |
|
437 | 436 | if not self.launchers: |
|
438 | 437 | self.notify_stop(self.stop_data) |
|
439 | 438 | |
|
440 | 439 | |
|
441 | 440 | #----------------------------------------------------------------------------- |
|
442 | 441 | # MPIExec launchers |
|
443 | 442 | #----------------------------------------------------------------------------- |
|
444 | 443 | |
|
445 | 444 | |
|
446 | 445 | class MPIExecLauncher(LocalProcessLauncher): |
|
447 | 446 | """Launch an external process using mpiexec.""" |
|
448 | 447 | |
|
449 | 448 | mpi_cmd = List(['mpiexec'], config=True, |
|
450 | 449 | help="The mpiexec command to use in starting the process." |
|
451 | 450 | ) |
|
452 | 451 | mpi_args = List([], config=True, |
|
453 | 452 | help="The command line arguments to pass to mpiexec." |
|
454 | 453 | ) |
|
455 | 454 | program = List(['date'], config=True, |
|
456 | 455 | help="The program to start via mpiexec.") |
|
457 | 456 | program_args = List([], config=True, |
|
458 | 457 | help="The command line argument to the program." |
|
459 | 458 | ) |
|
460 | 459 | n = Int(1) |
|
461 | 460 | |
|
462 | 461 | def find_args(self): |
|
463 | 462 | """Build self.args using all the fields.""" |
|
464 | 463 | return self.mpi_cmd + ['-n', str(self.n)] + self.mpi_args + \ |
|
465 | 464 | self.program + self.program_args |
|
466 | 465 | |
|
467 | 466 | def start(self, n): |
|
468 | 467 | """Start n instances of the program using mpiexec.""" |
|
469 | 468 | self.n = n |
|
470 | 469 | return super(MPIExecLauncher, self).start() |
|
471 | 470 | |
|
472 | 471 | |
|
473 | 472 | class MPIExecControllerLauncher(MPIExecLauncher): |
|
474 | 473 | """Launch a controller using mpiexec.""" |
|
475 | 474 | |
|
476 | 475 | controller_cmd = List(ipcontroller_cmd_argv, config=True, |
|
477 | 476 | help="Popen command to launch the Contropper" |
|
478 | 477 | ) |
|
479 | 478 | controller_args = List(['--log-to-file','log_level=%i'%logging.INFO], config=True, |
|
480 | 479 | help="Command line arguments to pass to ipcontroller." |
|
481 | 480 | ) |
|
482 | 481 | n = Int(1) |
|
483 | 482 | |
|
484 | 483 | def start(self, profile_dir): |
|
485 | 484 | """Start the controller by profile_dir.""" |
|
486 | 485 | self.controller_args.extend(['profile_dir=%s'%profile_dir]) |
|
487 | 486 | self.profile_dir = unicode(profile_dir) |
|
488 | 487 | self.log.info("Starting MPIExecControllerLauncher: %r" % self.args) |
|
489 | 488 | return super(MPIExecControllerLauncher, self).start(1) |
|
490 | 489 | |
|
491 | 490 | def find_args(self): |
|
492 | 491 | return self.mpi_cmd + ['-n', self.n] + self.mpi_args + \ |
|
493 | 492 | self.controller_cmd + self.controller_args |
|
494 | 493 | |
|
495 | 494 | |
|
496 | 495 | class MPIExecEngineSetLauncher(MPIExecLauncher): |
|
497 | 496 | |
|
498 | 497 | program = List(ipengine_cmd_argv, config=True, |
|
499 | 498 | help="Popen command for ipengine" |
|
500 | 499 | ) |
|
501 | 500 | program_args = List( |
|
502 | 501 | ['--log-to-file','log_level=%i'%logging.INFO], config=True, |
|
503 | 502 | help="Command line arguments for ipengine." |
|
504 | 503 | ) |
|
505 | 504 | n = Int(1) |
|
506 | 505 | |
|
507 | 506 | def start(self, n, profile_dir): |
|
508 | 507 | """Start n engines by profile or profile_dir.""" |
|
509 | 508 | self.program_args.extend(['profile_dir=%s'%profile_dir]) |
|
510 | 509 | self.profile_dir = unicode(profile_dir) |
|
511 | 510 | self.n = n |
|
512 | 511 | self.log.info('Starting MPIExecEngineSetLauncher: %r' % self.args) |
|
513 | 512 | return super(MPIExecEngineSetLauncher, self).start(n) |
|
514 | 513 | |
|
515 | 514 | #----------------------------------------------------------------------------- |
|
516 | 515 | # SSH launchers |
|
517 | 516 | #----------------------------------------------------------------------------- |
|
518 | 517 | |
|
519 | 518 | # TODO: Get SSH Launcher working again. |
|
520 | 519 | |
|
521 | 520 | class SSHLauncher(LocalProcessLauncher): |
|
522 | 521 | """A minimal launcher for ssh. |
|
523 | 522 | |
|
524 | 523 | To be useful this will probably have to be extended to use the ``sshx`` |
|
525 | 524 | idea for environment variables. There could be other things this needs |
|
526 | 525 | as well. |
|
527 | 526 | """ |
|
528 | 527 | |
|
529 | 528 | ssh_cmd = List(['ssh'], config=True, |
|
530 | 529 | help="command for starting ssh") |
|
531 | 530 | ssh_args = List(['-tt'], config=True, |
|
532 | 531 | help="args to pass to ssh") |
|
533 | 532 | program = List(['date'], config=True, |
|
534 | 533 | help="Program to launch via ssh") |
|
535 | 534 | program_args = List([], config=True, |
|
536 | 535 | help="args to pass to remote program") |
|
537 | 536 | hostname = Unicode('', config=True, |
|
538 | 537 | help="hostname on which to launch the program") |
|
539 | 538 | user = Unicode('', config=True, |
|
540 | 539 | help="username for ssh") |
|
541 | 540 | location = Unicode('', config=True, |
|
542 | 541 | help="user@hostname location for ssh in one setting") |
|
543 | 542 | |
|
544 | 543 | def _hostname_changed(self, name, old, new): |
|
545 | 544 | if self.user: |
|
546 | 545 | self.location = u'%s@%s' % (self.user, new) |
|
547 | 546 | else: |
|
548 | 547 | self.location = new |
|
549 | 548 | |
|
550 | 549 | def _user_changed(self, name, old, new): |
|
551 | 550 | self.location = u'%s@%s' % (new, self.hostname) |
|
552 | 551 | |
|
553 | 552 | def find_args(self): |
|
554 | 553 | return self.ssh_cmd + self.ssh_args + [self.location] + \ |
|
555 | 554 | self.program + self.program_args |
|
556 | 555 | |
|
557 | 556 | def start(self, profile_dir, hostname=None, user=None): |
|
558 | 557 | self.profile_dir = unicode(profile_dir) |
|
559 | 558 | if hostname is not None: |
|
560 | 559 | self.hostname = hostname |
|
561 | 560 | if user is not None: |
|
562 | 561 | self.user = user |
|
563 | 562 | |
|
564 | 563 | return super(SSHLauncher, self).start() |
|
565 | 564 | |
|
566 | 565 | def signal(self, sig): |
|
567 | 566 | if self.state == 'running': |
|
568 | 567 | # send escaped ssh connection-closer |
|
569 | 568 | self.process.stdin.write('~.') |
|
570 | 569 | self.process.stdin.flush() |
|
571 | 570 | |
|
572 | 571 | |
|
573 | 572 | |
|
574 | 573 | class SSHControllerLauncher(SSHLauncher): |
|
575 | 574 | |
|
576 | 575 | program = List(ipcontroller_cmd_argv, config=True, |
|
577 | 576 | help="remote ipcontroller command.") |
|
578 | 577 | program_args = List(['--reuse-files', '--log-to-file','log_level=%i'%logging.INFO], config=True, |
|
579 | 578 | help="Command line arguments to ipcontroller.") |
|
580 | 579 | |
|
581 | 580 | |
|
582 | 581 | class SSHEngineLauncher(SSHLauncher): |
|
583 | 582 | program = List(ipengine_cmd_argv, config=True, |
|
584 | 583 | help="remote ipengine command.") |
|
585 | 584 | # Command line arguments for ipengine. |
|
586 | 585 | program_args = List( |
|
587 | 586 | ['--log-to-file','log_level=%i'%logging.INFO], config=True, |
|
588 | 587 | help="Command line arguments to ipengine." |
|
589 | 588 | ) |
|
590 | 589 | |
|
591 | 590 | class SSHEngineSetLauncher(LocalEngineSetLauncher): |
|
592 | 591 | launcher_class = SSHEngineLauncher |
|
593 | 592 | engines = Dict(config=True, |
|
594 | 593 | help="""dict of engines to launch. This is a dict by hostname of ints, |
|
595 | 594 | corresponding to the number of engines to start on that host.""") |
|
596 | 595 | |
|
597 | 596 | def start(self, n, profile_dir): |
|
598 | 597 | """Start engines by profile or profile_dir. |
|
599 | 598 | `n` is ignored, and the `engines` config property is used instead. |
|
600 | 599 | """ |
|
601 | 600 | |
|
602 | 601 | self.profile_dir = unicode(profile_dir) |
|
603 | 602 | dlist = [] |
|
604 | 603 | for host, n in self.engines.iteritems(): |
|
605 | 604 | if isinstance(n, (tuple, list)): |
|
606 | 605 | n, args = n |
|
607 | 606 | else: |
|
608 | 607 | args = copy.deepcopy(self.engine_args) |
|
609 | 608 | |
|
610 | 609 | if '@' in host: |
|
611 | 610 | user,host = host.split('@',1) |
|
612 | 611 | else: |
|
613 | 612 | user=None |
|
614 | 613 | for i in range(n): |
|
615 | 614 | el = self.launcher_class(work_dir=self.work_dir, config=self.config, logname=self.log.name) |
|
616 | 615 | |
|
617 | 616 | # Copy the engine args over to each engine launcher. |
|
618 | 617 | i |
|
619 | 618 | el.program_args = args |
|
620 | 619 | el.on_stop(self._notice_engine_stopped) |
|
621 | 620 | d = el.start(profile_dir, user=user, hostname=host) |
|
622 | 621 | if i==0: |
|
623 | 622 | self.log.info("Starting SSHEngineSetLauncher: %r" % el.args) |
|
624 | 623 | self.launchers[host+str(i)] = el |
|
625 | 624 | dlist.append(d) |
|
626 | 625 | self.notify_start(dlist) |
|
627 | 626 | return dlist |
|
628 | 627 | |
|
629 | 628 | |
|
630 | 629 | |
|
631 | 630 | #----------------------------------------------------------------------------- |
|
632 | 631 | # Windows HPC Server 2008 scheduler launchers |
|
633 | 632 | #----------------------------------------------------------------------------- |
|
634 | 633 | |
|
635 | 634 | |
|
636 | 635 | # This is only used on Windows. |
|
637 | 636 | def find_job_cmd(): |
|
638 | 637 | if WINDOWS: |
|
639 | 638 | try: |
|
640 | 639 | return find_cmd('job') |
|
641 | 640 | except (FindCmdError, ImportError): |
|
642 | 641 | # ImportError will be raised if win32api is not installed |
|
643 | 642 | return 'job' |
|
644 | 643 | else: |
|
645 | 644 | return 'job' |
|
646 | 645 | |
|
647 | 646 | |
|
648 | 647 | class WindowsHPCLauncher(BaseLauncher): |
|
649 | 648 | |
|
650 | 649 | job_id_regexp = Unicode(r'\d+', config=True, |
|
651 | 650 | help="""A regular expression used to get the job id from the output of the |
|
652 | 651 | submit_command. """ |
|
653 | 652 | ) |
|
654 | 653 | job_file_name = Unicode(u'ipython_job.xml', config=True, |
|
655 | 654 | help="The filename of the instantiated job script.") |
|
656 | 655 | # The full path to the instantiated job script. This gets made dynamically |
|
657 | 656 | # by combining the work_dir with the job_file_name. |
|
658 | 657 | job_file = Unicode(u'') |
|
659 | 658 | scheduler = Unicode('', config=True, |
|
660 | 659 | help="The hostname of the scheduler to submit the job to.") |
|
661 | 660 | job_cmd = Unicode(find_job_cmd(), config=True, |
|
662 | 661 | help="The command for submitting jobs.") |
|
663 | 662 | |
|
664 | 663 | def __init__(self, work_dir=u'.', config=None, **kwargs): |
|
665 | 664 | super(WindowsHPCLauncher, self).__init__( |
|
666 | 665 | work_dir=work_dir, config=config, **kwargs |
|
667 | 666 | ) |
|
668 | 667 | |
|
669 | 668 | @property |
|
670 | 669 | def job_file(self): |
|
671 | 670 | return os.path.join(self.work_dir, self.job_file_name) |
|
672 | 671 | |
|
673 | 672 | def write_job_file(self, n): |
|
674 | 673 | raise NotImplementedError("Implement write_job_file in a subclass.") |
|
675 | 674 | |
|
676 | 675 | def find_args(self): |
|
677 | 676 | return [u'job.exe'] |
|
678 | 677 | |
|
679 | 678 | def parse_job_id(self, output): |
|
680 | 679 | """Take the output of the submit command and return the job id.""" |
|
681 | 680 | m = re.search(self.job_id_regexp, output) |
|
682 | 681 | if m is not None: |
|
683 | 682 | job_id = m.group() |
|
684 | 683 | else: |
|
685 | 684 | raise LauncherError("Job id couldn't be determined: %s" % output) |
|
686 | 685 | self.job_id = job_id |
|
687 | 686 | self.log.info('Job started with job id: %r' % job_id) |
|
688 | 687 | return job_id |
|
689 | 688 | |
|
690 | 689 | def start(self, n): |
|
691 | 690 | """Start n copies of the process using the Win HPC job scheduler.""" |
|
692 | 691 | self.write_job_file(n) |
|
693 | 692 | args = [ |
|
694 | 693 | 'submit', |
|
695 | 694 | '/jobfile:%s' % self.job_file, |
|
696 | 695 | '/scheduler:%s' % self.scheduler |
|
697 | 696 | ] |
|
698 | 697 | self.log.info("Starting Win HPC Job: %s" % (self.job_cmd + ' ' + ' '.join(args),)) |
|
699 | 698 | # Twisted will raise DeprecationWarnings if we try to pass unicode to this |
|
700 | 699 | output = check_output([self.job_cmd]+args, |
|
701 | 700 | env=os.environ, |
|
702 | 701 | cwd=self.work_dir, |
|
703 | 702 | stderr=STDOUT |
|
704 | 703 | ) |
|
705 | 704 | job_id = self.parse_job_id(output) |
|
706 | 705 | self.notify_start(job_id) |
|
707 | 706 | return job_id |
|
708 | 707 | |
|
709 | 708 | def stop(self): |
|
710 | 709 | args = [ |
|
711 | 710 | 'cancel', |
|
712 | 711 | self.job_id, |
|
713 | 712 | '/scheduler:%s' % self.scheduler |
|
714 | 713 | ] |
|
715 | 714 | self.log.info("Stopping Win HPC Job: %s" % (self.job_cmd + ' ' + ' '.join(args),)) |
|
716 | 715 | try: |
|
717 | 716 | output = check_output([self.job_cmd]+args, |
|
718 | 717 | env=os.environ, |
|
719 | 718 | cwd=self.work_dir, |
|
720 | 719 | stderr=STDOUT |
|
721 | 720 | ) |
|
722 | 721 | except: |
|
723 | 722 | output = 'The job already appears to be stoppped: %r' % self.job_id |
|
724 | 723 | self.notify_stop(dict(job_id=self.job_id, output=output)) # Pass the output of the kill cmd |
|
725 | 724 | return output |
|
726 | 725 | |
|
727 | 726 | |
|
728 | 727 | class WindowsHPCControllerLauncher(WindowsHPCLauncher): |
|
729 | 728 | |
|
730 | 729 | job_file_name = Unicode(u'ipcontroller_job.xml', config=True, |
|
731 | 730 | help="WinHPC xml job file.") |
|
732 | 731 | extra_args = List([], config=False, |
|
733 | 732 | help="extra args to pass to ipcontroller") |
|
734 | 733 | |
|
735 | 734 | def write_job_file(self, n): |
|
736 | 735 | job = IPControllerJob(config=self.config) |
|
737 | 736 | |
|
738 | 737 | t = IPControllerTask(config=self.config) |
|
739 | 738 | # The tasks work directory is *not* the actual work directory of |
|
740 | 739 | # the controller. It is used as the base path for the stdout/stderr |
|
741 | 740 | # files that the scheduler redirects to. |
|
742 | 741 | t.work_directory = self.profile_dir |
|
743 | 742 | # Add the profile_dir and from self.start(). |
|
744 | 743 | t.controller_args.extend(self.extra_args) |
|
745 | 744 | job.add_task(t) |
|
746 | 745 | |
|
747 | 746 | self.log.info("Writing job description file: %s" % self.job_file) |
|
748 | 747 | job.write(self.job_file) |
|
749 | 748 | |
|
750 | 749 | @property |
|
751 | 750 | def job_file(self): |
|
752 | 751 | return os.path.join(self.profile_dir, self.job_file_name) |
|
753 | 752 | |
|
754 | 753 | def start(self, profile_dir): |
|
755 | 754 | """Start the controller by profile_dir.""" |
|
756 | 755 | self.extra_args = ['profile_dir=%s'%profile_dir] |
|
757 | 756 | self.profile_dir = unicode(profile_dir) |
|
758 | 757 | return super(WindowsHPCControllerLauncher, self).start(1) |
|
759 | 758 | |
|
760 | 759 | |
|
761 | 760 | class WindowsHPCEngineSetLauncher(WindowsHPCLauncher): |
|
762 | 761 | |
|
763 | 762 | job_file_name = Unicode(u'ipengineset_job.xml', config=True, |
|
764 | 763 | help="jobfile for ipengines job") |
|
765 | 764 | extra_args = List([], config=False, |
|
766 | 765 | help="extra args to pas to ipengine") |
|
767 | 766 | |
|
768 | 767 | def write_job_file(self, n): |
|
769 | 768 | job = IPEngineSetJob(config=self.config) |
|
770 | 769 | |
|
771 | 770 | for i in range(n): |
|
772 | 771 | t = IPEngineTask(config=self.config) |
|
773 | 772 | # The tasks work directory is *not* the actual work directory of |
|
774 | 773 | # the engine. It is used as the base path for the stdout/stderr |
|
775 | 774 | # files that the scheduler redirects to. |
|
776 | 775 | t.work_directory = self.profile_dir |
|
777 | 776 | # Add the profile_dir and from self.start(). |
|
778 | 777 | t.engine_args.extend(self.extra_args) |
|
779 | 778 | job.add_task(t) |
|
780 | 779 | |
|
781 | 780 | self.log.info("Writing job description file: %s" % self.job_file) |
|
782 | 781 | job.write(self.job_file) |
|
783 | 782 | |
|
784 | 783 | @property |
|
785 | 784 | def job_file(self): |
|
786 | 785 | return os.path.join(self.profile_dir, self.job_file_name) |
|
787 | 786 | |
|
788 | 787 | def start(self, n, profile_dir): |
|
789 | 788 | """Start the controller by profile_dir.""" |
|
790 | 789 | self.extra_args = ['profile_dir=%s'%profile_dir] |
|
791 | 790 | self.profile_dir = unicode(profile_dir) |
|
792 | 791 | return super(WindowsHPCEngineSetLauncher, self).start(n) |
|
793 | 792 | |
|
794 | 793 | |
|
795 | 794 | #----------------------------------------------------------------------------- |
|
796 | 795 | # Batch (PBS) system launchers |
|
797 | 796 | #----------------------------------------------------------------------------- |
|
798 | 797 | |
|
799 | 798 | class BatchSystemLauncher(BaseLauncher): |
|
800 | 799 | """Launch an external process using a batch system. |
|
801 | 800 | |
|
802 | 801 | This class is designed to work with UNIX batch systems like PBS, LSF, |
|
803 | 802 | GridEngine, etc. The overall model is that there are different commands |
|
804 | 803 | like qsub, qdel, etc. that handle the starting and stopping of the process. |
|
805 | 804 | |
|
806 | 805 | This class also has the notion of a batch script. The ``batch_template`` |
|
807 | 806 | attribute can be set to a string that is a template for the batch script. |
|
808 |
This template is instantiated using |
|
|
809 |
|
|
|
807 | This template is instantiated using string formatting. Thus the template can | |
|
808 | use {n} fot the number of instances. Subclasses can add additional variables | |
|
810 | 809 | to the template dict. |
|
811 | 810 | """ |
|
812 | 811 | |
|
813 | 812 | # Subclasses must fill these in. See PBSEngineSet |
|
814 | 813 | submit_command = List([''], config=True, |
|
815 | 814 | help="The name of the command line program used to submit jobs.") |
|
816 | 815 | delete_command = List([''], config=True, |
|
817 | 816 | help="The name of the command line program used to delete jobs.") |
|
818 | 817 | job_id_regexp = Unicode('', config=True, |
|
819 | 818 | help="""A regular expression used to get the job id from the output of the |
|
820 | 819 | submit_command.""") |
|
821 | 820 | batch_template = Unicode('', config=True, |
|
822 | 821 | help="The string that is the batch script template itself.") |
|
823 | 822 | batch_template_file = Unicode(u'', config=True, |
|
824 | 823 | help="The file that contains the batch template.") |
|
825 | 824 | batch_file_name = Unicode(u'batch_script', config=True, |
|
826 | 825 | help="The filename of the instantiated batch script.") |
|
827 | 826 | queue = Unicode(u'', config=True, |
|
828 | 827 | help="The PBS Queue.") |
|
829 | 828 | |
|
830 | 829 | # not configurable, override in subclasses |
|
831 | 830 | # PBS Job Array regex |
|
832 | 831 | job_array_regexp = Unicode('') |
|
833 | 832 | job_array_template = Unicode('') |
|
834 | 833 | # PBS Queue regex |
|
835 | 834 | queue_regexp = Unicode('') |
|
836 | 835 | queue_template = Unicode('') |
|
837 | 836 | # The default batch template, override in subclasses |
|
838 | 837 | default_template = Unicode('') |
|
839 | 838 | # The full path to the instantiated batch script. |
|
840 | 839 | batch_file = Unicode(u'') |
|
841 | 840 | # the format dict used with batch_template: |
|
842 | 841 | context = Dict() |
|
843 | 842 | |
|
844 | 843 | |
|
845 | 844 | def find_args(self): |
|
846 | 845 | return self.submit_command + [self.batch_file] |
|
847 | 846 | |
|
848 | 847 | def __init__(self, work_dir=u'.', config=None, **kwargs): |
|
849 | 848 | super(BatchSystemLauncher, self).__init__( |
|
850 | 849 | work_dir=work_dir, config=config, **kwargs |
|
851 | 850 | ) |
|
852 | 851 | self.batch_file = os.path.join(self.work_dir, self.batch_file_name) |
|
853 | 852 | |
|
854 | 853 | def parse_job_id(self, output): |
|
855 | 854 | """Take the output of the submit command and return the job id.""" |
|
856 | 855 | m = re.search(self.job_id_regexp, output) |
|
857 | 856 | if m is not None: |
|
858 | 857 | job_id = m.group() |
|
859 | 858 | else: |
|
860 | 859 | raise LauncherError("Job id couldn't be determined: %s" % output) |
|
861 | 860 | self.job_id = job_id |
|
862 | 861 | self.log.info('Job submitted with job id: %r' % job_id) |
|
863 | 862 | return job_id |
|
864 | 863 | |
|
865 | 864 | def write_batch_script(self, n): |
|
866 | 865 | """Instantiate and write the batch script to the work_dir.""" |
|
867 | 866 | self.context['n'] = n |
|
868 | 867 | self.context['queue'] = self.queue |
|
869 | print self.context | |
|
870 | 868 | # first priority is batch_template if set |
|
871 | 869 | if self.batch_template_file and not self.batch_template: |
|
872 | 870 | # second priority is batch_template_file |
|
873 | 871 | with open(self.batch_template_file) as f: |
|
874 | 872 | self.batch_template = f.read() |
|
875 | 873 | if not self.batch_template: |
|
876 | 874 | # third (last) priority is default_template |
|
877 | 875 | self.batch_template = self.default_template |
|
878 | 876 | |
|
879 | 877 | regex = re.compile(self.job_array_regexp) |
|
880 | 878 | # print regex.search(self.batch_template) |
|
881 | 879 | if not regex.search(self.batch_template): |
|
882 | 880 | self.log.info("adding job array settings to batch script") |
|
883 | 881 | firstline, rest = self.batch_template.split('\n',1) |
|
884 | 882 | self.batch_template = u'\n'.join([firstline, self.job_array_template, rest]) |
|
885 | 883 | |
|
886 | 884 | regex = re.compile(self.queue_regexp) |
|
887 | 885 | # print regex.search(self.batch_template) |
|
888 | 886 | if self.queue and not regex.search(self.batch_template): |
|
889 | 887 | self.log.info("adding PBS queue settings to batch script") |
|
890 | 888 | firstline, rest = self.batch_template.split('\n',1) |
|
891 | 889 | self.batch_template = u'\n'.join([firstline, self.queue_template, rest]) |
|
892 | 890 | |
|
893 |
script_as_string = |
|
|
891 | script_as_string = self.batch_template.format(**self.context) | |
|
894 | 892 | self.log.info('Writing instantiated batch script: %s' % self.batch_file) |
|
895 | 893 | |
|
896 | 894 | with open(self.batch_file, 'w') as f: |
|
897 | 895 | f.write(script_as_string) |
|
898 | 896 | os.chmod(self.batch_file, stat.S_IRUSR | stat.S_IWUSR | stat.S_IXUSR) |
|
899 | 897 | |
|
900 | 898 | def start(self, n, profile_dir): |
|
901 | 899 | """Start n copies of the process using a batch system.""" |
|
902 |
# Here we save profile |
|
|
903 |
# can be used in the batch script template as |
|
|
904 | # ${profile_dir} | |
|
900 | # Here we save profile_dir in the context so they | |
|
901 | # can be used in the batch script template as {profile_dir} | |
|
905 | 902 | self.context['profile_dir'] = profile_dir |
|
906 | 903 | self.profile_dir = unicode(profile_dir) |
|
907 | 904 | self.write_batch_script(n) |
|
908 | 905 | output = check_output(self.args, env=os.environ) |
|
909 | 906 | |
|
910 | 907 | job_id = self.parse_job_id(output) |
|
911 | 908 | self.notify_start(job_id) |
|
912 | 909 | return job_id |
|
913 | 910 | |
|
914 | 911 | def stop(self): |
|
915 | 912 | output = check_output(self.delete_command+[self.job_id], env=os.environ) |
|
916 | 913 | self.notify_stop(dict(job_id=self.job_id, output=output)) # Pass the output of the kill cmd |
|
917 | 914 | return output |
|
918 | 915 | |
|
919 | 916 | |
|
920 | 917 | class PBSLauncher(BatchSystemLauncher): |
|
921 | 918 | """A BatchSystemLauncher subclass for PBS.""" |
|
922 | 919 | |
|
923 | 920 | submit_command = List(['qsub'], config=True, |
|
924 | 921 | help="The PBS submit command ['qsub']") |
|
925 | 922 | delete_command = List(['qdel'], config=True, |
|
926 | 923 | help="The PBS delete command ['qsub']") |
|
927 | 924 | job_id_regexp = Unicode(r'\d+', config=True, |
|
928 | 925 | help="Regular expresion for identifying the job ID [r'\d+']") |
|
929 | 926 | |
|
930 | 927 | batch_file = Unicode(u'') |
|
931 | 928 | job_array_regexp = Unicode('#PBS\W+-t\W+[\w\d\-\$]+') |
|
932 |
job_array_template = Unicode('#PBS -t 1- |
|
|
929 | job_array_template = Unicode('#PBS -t 1-{n}') | |
|
933 | 930 | queue_regexp = Unicode('#PBS\W+-q\W+\$?\w+') |
|
934 |
queue_template = Unicode('#PBS -q |
|
|
931 | queue_template = Unicode('#PBS -q {queue}') | |
|
935 | 932 | |
|
936 | 933 | |
|
937 | 934 | class PBSControllerLauncher(PBSLauncher): |
|
938 | 935 | """Launch a controller using PBS.""" |
|
939 | 936 | |
|
940 | 937 | batch_file_name = Unicode(u'pbs_controller', config=True, |
|
941 | 938 | help="batch file name for the controller job.") |
|
942 | 939 | default_template= Unicode("""#!/bin/sh |
|
943 | 940 | #PBS -V |
|
944 | 941 | #PBS -N ipcontroller |
|
945 |
%s --log-to-file profile_dir |
|
|
942 | %s --log-to-file profile_dir={profile_dir} | |
|
946 | 943 | """%(' '.join(ipcontroller_cmd_argv))) |
|
947 | 944 | |
|
948 | 945 | def start(self, profile_dir): |
|
949 | 946 | """Start the controller by profile or profile_dir.""" |
|
950 | 947 | self.log.info("Starting PBSControllerLauncher: %r" % self.args) |
|
951 | 948 | return super(PBSControllerLauncher, self).start(1, profile_dir) |
|
952 | 949 | |
|
953 | 950 | |
|
954 | 951 | class PBSEngineSetLauncher(PBSLauncher): |
|
955 | 952 | """Launch Engines using PBS""" |
|
956 | 953 | batch_file_name = Unicode(u'pbs_engines', config=True, |
|
957 | 954 | help="batch file name for the engine(s) job.") |
|
958 | 955 | default_template= Unicode(u"""#!/bin/sh |
|
959 | 956 | #PBS -V |
|
960 | 957 | #PBS -N ipengine |
|
961 |
%s profile_dir |
|
|
958 | %s profile_dir={profile_dir} | |
|
962 | 959 | """%(' '.join(ipengine_cmd_argv))) |
|
963 | 960 | |
|
964 | 961 | def start(self, n, profile_dir): |
|
965 | 962 | """Start n engines by profile or profile_dir.""" |
|
966 | 963 | self.log.info('Starting %i engines with PBSEngineSetLauncher: %r' % (n, self.args)) |
|
967 | 964 | return super(PBSEngineSetLauncher, self).start(n, profile_dir) |
|
968 | 965 | |
|
969 | 966 | #SGE is very similar to PBS |
|
970 | 967 | |
|
971 | 968 | class SGELauncher(PBSLauncher): |
|
972 | 969 | """Sun GridEngine is a PBS clone with slightly different syntax""" |
|
973 |
job_array_regexp = Unicode('#\$\ |
|
|
974 |
job_array_template = Unicode('#$ |
|
|
975 |
queue_regexp = Unicode('# |
|
|
976 |
queue_template = Unicode('#$ |
|
|
970 | job_array_regexp = Unicode('#\$\W+\-t') | |
|
971 | job_array_template = Unicode('#$ -t 1-{n}') | |
|
972 | queue_regexp = Unicode('#\$\W+-q\W+\$?\w+') | |
|
973 | queue_template = Unicode('#$ -q $queue') | |
|
977 | 974 | |
|
978 | 975 | class SGEControllerLauncher(SGELauncher): |
|
979 | 976 | """Launch a controller using SGE.""" |
|
980 | 977 | |
|
981 | 978 | batch_file_name = Unicode(u'sge_controller', config=True, |
|
982 | 979 | help="batch file name for the ipontroller job.") |
|
983 |
default_template= Unicode(u"""#$ |
|
|
984 |
#$ |
|
|
985 |
#$ |
|
|
986 |
%s --log-to-file profile_dir= |
|
|
980 | default_template= Unicode(u"""#$ -V | |
|
981 | #$ -S /bin/sh | |
|
982 | #$ -N ipcontroller | |
|
983 | %s --log-to-file profile_dir={profile_dir} | |
|
987 | 984 | """%(' '.join(ipcontroller_cmd_argv))) |
|
988 | 985 | |
|
989 | 986 | def start(self, profile_dir): |
|
990 | 987 | """Start the controller by profile or profile_dir.""" |
|
991 | 988 | self.log.info("Starting PBSControllerLauncher: %r" % self.args) |
|
992 | 989 | return super(SGEControllerLauncher, self).start(1, profile_dir) |
|
993 | 990 | |
|
994 | 991 | class SGEEngineSetLauncher(SGELauncher): |
|
995 | 992 | """Launch Engines with SGE""" |
|
996 | 993 | batch_file_name = Unicode(u'sge_engines', config=True, |
|
997 | 994 | help="batch file name for the engine(s) job.") |
|
998 |
default_template = Unicode("""#$ |
|
|
999 |
#$ |
|
|
1000 |
#$ |
|
|
1001 |
%s profile_dir= |
|
|
995 | default_template = Unicode("""#$ -V | |
|
996 | #$ -S /bin/sh | |
|
997 | #$ -N ipengine | |
|
998 | %s profile_dir={profile_dir} | |
|
1002 | 999 | """%(' '.join(ipengine_cmd_argv))) |
|
1003 | 1000 | |
|
1004 | 1001 | def start(self, n, profile_dir): |
|
1005 | 1002 | """Start n engines by profile or profile_dir.""" |
|
1006 | 1003 | self.log.info('Starting %i engines with SGEEngineSetLauncher: %r' % (n, self.args)) |
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1007 | 1004 | return super(SGEEngineSetLauncher, self).start(n, profile_dir) |
|
1008 | 1005 | |
|
1009 | 1006 | |
|
1010 | 1007 | #----------------------------------------------------------------------------- |
|
1011 | 1008 | # A launcher for ipcluster itself! |
|
1012 | 1009 | #----------------------------------------------------------------------------- |
|
1013 | 1010 | |
|
1014 | 1011 | |
|
1015 | 1012 | class IPClusterLauncher(LocalProcessLauncher): |
|
1016 | 1013 | """Launch the ipcluster program in an external process.""" |
|
1017 | 1014 | |
|
1018 | 1015 | ipcluster_cmd = List(ipcluster_cmd_argv, config=True, |
|
1019 | 1016 | help="Popen command for ipcluster") |
|
1020 | 1017 | ipcluster_args = List( |
|
1021 | 1018 | ['--clean-logs', '--log-to-file', 'log_level=%i'%logging.INFO], config=True, |
|
1022 | 1019 | help="Command line arguments to pass to ipcluster.") |
|
1023 | 1020 | ipcluster_subcommand = Unicode('start') |
|
1024 | 1021 | ipcluster_n = Int(2) |
|
1025 | 1022 | |
|
1026 | 1023 | def find_args(self): |
|
1027 | 1024 | return self.ipcluster_cmd + ['--'+self.ipcluster_subcommand] + \ |
|
1028 | 1025 | ['n=%i'%self.ipcluster_n] + self.ipcluster_args |
|
1029 | 1026 | |
|
1030 | 1027 | def start(self): |
|
1031 | 1028 | self.log.info("Starting ipcluster: %r" % self.args) |
|
1032 | 1029 | return super(IPClusterLauncher, self).start() |
|
1033 | 1030 | |
|
1034 | 1031 | #----------------------------------------------------------------------------- |
|
1035 | 1032 | # Collections of launchers |
|
1036 | 1033 | #----------------------------------------------------------------------------- |
|
1037 | 1034 | |
|
1038 | 1035 | local_launchers = [ |
|
1039 | 1036 | LocalControllerLauncher, |
|
1040 | 1037 | LocalEngineLauncher, |
|
1041 | 1038 | LocalEngineSetLauncher, |
|
1042 | 1039 | ] |
|
1043 | 1040 | mpi_launchers = [ |
|
1044 | 1041 | MPIExecLauncher, |
|
1045 | 1042 | MPIExecControllerLauncher, |
|
1046 | 1043 | MPIExecEngineSetLauncher, |
|
1047 | 1044 | ] |
|
1048 | 1045 | ssh_launchers = [ |
|
1049 | 1046 | SSHLauncher, |
|
1050 | 1047 | SSHControllerLauncher, |
|
1051 | 1048 | SSHEngineLauncher, |
|
1052 | 1049 | SSHEngineSetLauncher, |
|
1053 | 1050 | ] |
|
1054 | 1051 | winhpc_launchers = [ |
|
1055 | 1052 | WindowsHPCLauncher, |
|
1056 | 1053 | WindowsHPCControllerLauncher, |
|
1057 | 1054 | WindowsHPCEngineSetLauncher, |
|
1058 | 1055 | ] |
|
1059 | 1056 | pbs_launchers = [ |
|
1060 | 1057 | PBSLauncher, |
|
1061 | 1058 | PBSControllerLauncher, |
|
1062 | 1059 | PBSEngineSetLauncher, |
|
1063 | 1060 | ] |
|
1064 | 1061 | sge_launchers = [ |
|
1065 | 1062 | SGELauncher, |
|
1066 | 1063 | SGEControllerLauncher, |
|
1067 | 1064 | SGEEngineSetLauncher, |
|
1068 | 1065 | ] |
|
1069 | 1066 | all_launchers = local_launchers + mpi_launchers + ssh_launchers + winhpc_launchers\ |
|
1070 | 1067 | + pbs_launchers + sge_launchers |
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