Show More
@@ -1,230 +1,247 | |||
|
1 | 1 | # -*- coding: utf-8 -*- |
|
2 | 2 | """Tools for handling LaTeX.""" |
|
3 | 3 | |
|
4 | 4 | # Copyright (c) IPython Development Team. |
|
5 | 5 | # Distributed under the terms of the Modified BSD License. |
|
6 | 6 | |
|
7 | 7 | from io import BytesIO, open |
|
8 | 8 | import os |
|
9 | 9 | import tempfile |
|
10 | 10 | import shutil |
|
11 | 11 | import subprocess |
|
12 | 12 | from base64 import encodebytes |
|
13 | 13 | import textwrap |
|
14 | 14 | |
|
15 | 15 | from pathlib import Path, PurePath |
|
16 | 16 | |
|
17 | 17 | from IPython.utils.process import find_cmd, FindCmdError |
|
18 | 18 | from traitlets.config import get_config |
|
19 | 19 | from traitlets.config.configurable import SingletonConfigurable |
|
20 | 20 | from traitlets import List, Bool, Unicode |
|
21 | 21 | from IPython.utils.py3compat import cast_unicode |
|
22 | 22 | |
|
23 | 23 | |
|
24 | 24 | class LaTeXTool(SingletonConfigurable): |
|
25 | 25 | """An object to store configuration of the LaTeX tool.""" |
|
26 | 26 | def _config_default(self): |
|
27 | 27 | return get_config() |
|
28 | 28 | |
|
29 | 29 | backends = List( |
|
30 | 30 | Unicode(), ["matplotlib", "dvipng"], |
|
31 | 31 | help="Preferred backend to draw LaTeX math equations. " |
|
32 | 32 | "Backends in the list are checked one by one and the first " |
|
33 | 33 | "usable one is used. Note that `matplotlib` backend " |
|
34 | 34 | "is usable only for inline style equations. To draw " |
|
35 | 35 | "display style equations, `dvipng` backend must be specified. ", |
|
36 | 36 | # It is a List instead of Enum, to make configuration more |
|
37 | 37 | # flexible. For example, to use matplotlib mainly but dvipng |
|
38 | 38 | # for display style, the default ["matplotlib", "dvipng"] can |
|
39 | 39 | # be used. To NOT use dvipng so that other repr such as |
|
40 | 40 | # unicode pretty printing is used, you can use ["matplotlib"]. |
|
41 | 41 | ).tag(config=True) |
|
42 | 42 | |
|
43 | 43 | use_breqn = Bool( |
|
44 | 44 | True, |
|
45 | 45 | help="Use breqn.sty to automatically break long equations. " |
|
46 | 46 | "This configuration takes effect only for dvipng backend.", |
|
47 | 47 | ).tag(config=True) |
|
48 | 48 | |
|
49 | 49 | packages = List( |
|
50 | 50 | ['amsmath', 'amsthm', 'amssymb', 'bm'], |
|
51 | 51 | help="A list of packages to use for dvipng backend. " |
|
52 | 52 | "'breqn' will be automatically appended when use_breqn=True.", |
|
53 | 53 | ).tag(config=True) |
|
54 | 54 | |
|
55 | 55 | preamble = Unicode( |
|
56 | 56 | help="Additional preamble to use when generating LaTeX source " |
|
57 | 57 | "for dvipng backend.", |
|
58 | 58 | ).tag(config=True) |
|
59 | 59 | |
|
60 | 60 | |
|
61 | 61 | def latex_to_png(s, encode=False, backend=None, wrap=False, color='Black', |
|
62 | 62 | scale=1.0): |
|
63 | 63 | """Render a LaTeX string to PNG. |
|
64 | 64 | |
|
65 | 65 | Parameters |
|
66 | 66 | ---------- |
|
67 | 67 | s : str |
|
68 | 68 | The raw string containing valid inline LaTeX. |
|
69 | 69 | encode : bool, optional |
|
70 | 70 | Should the PNG data base64 encoded to make it JSON'able. |
|
71 | 71 | backend : {matplotlib, dvipng} |
|
72 | 72 | Backend for producing PNG data. |
|
73 | 73 | wrap : bool |
|
74 | 74 | If true, Automatically wrap `s` as a LaTeX equation. |
|
75 | 75 | color : string |
|
76 | 76 | Foreground color name among dvipsnames, e.g. 'Maroon' or on hex RGB |
|
77 | 77 | format, e.g. '#AA20FA'. |
|
78 | 78 | scale : float |
|
79 | 79 | Scale factor for the resulting PNG. |
|
80 | 80 | |
|
81 | 81 | None is returned when the backend cannot be used. |
|
82 | 82 | |
|
83 | 83 | """ |
|
84 | 84 | s = cast_unicode(s) |
|
85 | 85 | allowed_backends = LaTeXTool.instance().backends |
|
86 | 86 | if backend is None: |
|
87 | 87 | backend = allowed_backends[0] |
|
88 | 88 | if backend not in allowed_backends: |
|
89 | 89 | return None |
|
90 | 90 | if backend == 'matplotlib': |
|
91 | 91 | f = latex_to_png_mpl |
|
92 | 92 | elif backend == 'dvipng': |
|
93 | 93 | f = latex_to_png_dvipng |
|
94 | 94 | if color.startswith('#'): |
|
95 | 95 | # Convert hex RGB color to LaTeX RGB color. |
|
96 | 96 | if len(color) == 7: |
|
97 | 97 | try: |
|
98 | 98 | color = "RGB {}".format(" ".join([str(int(x, 16)) for x in |
|
99 | 99 | textwrap.wrap(color[1:], 2)])) |
|
100 | 100 | except ValueError as e: |
|
101 | 101 | raise ValueError('Invalid color specification {}.'.format(color)) from e |
|
102 | 102 | else: |
|
103 | 103 | raise ValueError('Invalid color specification {}.'.format(color)) |
|
104 | 104 | else: |
|
105 | 105 | raise ValueError('No such backend {0}'.format(backend)) |
|
106 | 106 | bin_data = f(s, wrap, color, scale) |
|
107 | 107 | if encode and bin_data: |
|
108 | 108 | bin_data = encodebytes(bin_data) |
|
109 | 109 | return bin_data |
|
110 | 110 | |
|
111 | 111 | |
|
112 | 112 | def latex_to_png_mpl(s, wrap, color='Black', scale=1.0): |
|
113 | 113 | try: |
|
114 | 114 | from matplotlib import figure, font_manager, mathtext |
|
115 | 115 | from matplotlib.backends import backend_agg |
|
116 | 116 | from pyparsing import ParseFatalException |
|
117 | 117 | except ImportError: |
|
118 | 118 | return None |
|
119 | 119 | |
|
120 | 120 | # mpl mathtext doesn't support display math, force inline |
|
121 | 121 | s = s.replace('$$', '$') |
|
122 | 122 | if wrap: |
|
123 | 123 | s = u'${0}$'.format(s) |
|
124 | 124 | |
|
125 | 125 | try: |
|
126 | 126 | prop = font_manager.FontProperties(size=12) |
|
127 | 127 | dpi = 120 * scale |
|
128 | 128 | buffer = BytesIO() |
|
129 | 129 | |
|
130 | 130 | # Adapted from mathtext.math_to_image |
|
131 | 131 | parser = mathtext.MathTextParser("path") |
|
132 | 132 | width, height, depth, _, _ = parser.parse(s, dpi=72, prop=prop) |
|
133 | 133 | fig = figure.Figure(figsize=(width / 72, height / 72)) |
|
134 | 134 | fig.text(0, depth / height, s, fontproperties=prop, color=color) |
|
135 | 135 | backend_agg.FigureCanvasAgg(fig) |
|
136 | 136 | fig.savefig(buffer, dpi=dpi, format="png", transparent=True) |
|
137 | 137 | return buffer.getvalue() |
|
138 | 138 | except (ValueError, RuntimeError, ParseFatalException): |
|
139 | 139 | return None |
|
140 | 140 | |
|
141 | 141 | |
|
142 | 142 | def latex_to_png_dvipng(s, wrap, color='Black', scale=1.0): |
|
143 | 143 | try: |
|
144 | 144 | find_cmd('latex') |
|
145 | 145 | find_cmd('dvipng') |
|
146 | 146 | except FindCmdError: |
|
147 | 147 | return None |
|
148 | 148 | try: |
|
149 | 149 | workdir = Path(tempfile.mkdtemp()) |
|
150 | 150 | tmpfile = workdir.joinpath("tmp.tex") |
|
151 | 151 | dvifile = workdir.joinpath("tmp.dvi") |
|
152 | 152 | outfile = workdir.joinpath("tmp.png") |
|
153 | 153 | |
|
154 | 154 | with tmpfile.open("w", encoding="utf8") as f: |
|
155 | 155 | f.writelines(genelatex(s, wrap)) |
|
156 | 156 | |
|
157 | 157 | with open(os.devnull, 'wb') as devnull: |
|
158 | 158 | subprocess.check_call( |
|
159 | 159 | ["latex", "-halt-on-error", "-interaction", "batchmode", tmpfile], |
|
160 | 160 | cwd=workdir, stdout=devnull, stderr=devnull) |
|
161 | 161 | |
|
162 | 162 | resolution = round(150*scale) |
|
163 | 163 | subprocess.check_call( |
|
164 | ["dvipng", "-T", "tight", "-D", str(resolution), "-z", "9", | |
|
165 | "-bg", "transparent", "-o", outfile, dvifile, "-fg", color], | |
|
166 | cwd=workdir, stdout=devnull, stderr=devnull) | |
|
164 | [ | |
|
165 | "dvipng", | |
|
166 | "-T", | |
|
167 | "tight", | |
|
168 | "-D", | |
|
169 | str(resolution), | |
|
170 | "-z", | |
|
171 | "9", | |
|
172 | "-bg", | |
|
173 | "Transparent", | |
|
174 | "-o", | |
|
175 | outfile, | |
|
176 | dvifile, | |
|
177 | "-fg", | |
|
178 | color, | |
|
179 | ], | |
|
180 | cwd=workdir, | |
|
181 | stdout=devnull, | |
|
182 | stderr=devnull, | |
|
183 | ) | |
|
167 | 184 | |
|
168 | 185 | with outfile.open("rb") as f: |
|
169 | 186 | return f.read() |
|
170 | 187 | except subprocess.CalledProcessError: |
|
171 | 188 | return None |
|
172 | 189 | finally: |
|
173 | 190 | shutil.rmtree(workdir) |
|
174 | 191 | |
|
175 | 192 | |
|
176 | 193 | def kpsewhich(filename): |
|
177 | 194 | """Invoke kpsewhich command with an argument `filename`.""" |
|
178 | 195 | try: |
|
179 | 196 | find_cmd("kpsewhich") |
|
180 | 197 | proc = subprocess.Popen( |
|
181 | 198 | ["kpsewhich", filename], |
|
182 | 199 | stdout=subprocess.PIPE, stderr=subprocess.PIPE) |
|
183 | 200 | (stdout, stderr) = proc.communicate() |
|
184 | 201 | return stdout.strip().decode('utf8', 'replace') |
|
185 | 202 | except FindCmdError: |
|
186 | 203 | pass |
|
187 | 204 | |
|
188 | 205 | |
|
189 | 206 | def genelatex(body, wrap): |
|
190 | 207 | """Generate LaTeX document for dvipng backend.""" |
|
191 | 208 | lt = LaTeXTool.instance() |
|
192 | 209 | breqn = wrap and lt.use_breqn and kpsewhich("breqn.sty") |
|
193 | 210 | yield r'\documentclass{article}' |
|
194 | 211 | packages = lt.packages |
|
195 | 212 | if breqn: |
|
196 | 213 | packages = packages + ['breqn'] |
|
197 | 214 | for pack in packages: |
|
198 | 215 | yield r'\usepackage{{{0}}}'.format(pack) |
|
199 | 216 | yield r'\pagestyle{empty}' |
|
200 | 217 | if lt.preamble: |
|
201 | 218 | yield lt.preamble |
|
202 | 219 | yield r'\begin{document}' |
|
203 | 220 | if breqn: |
|
204 | 221 | yield r'\begin{dmath*}' |
|
205 | 222 | yield body |
|
206 | 223 | yield r'\end{dmath*}' |
|
207 | 224 | elif wrap: |
|
208 | 225 | yield u'$${0}$$'.format(body) |
|
209 | 226 | else: |
|
210 | 227 | yield body |
|
211 | 228 | yield u'\\end{document}' |
|
212 | 229 | |
|
213 | 230 | |
|
214 | 231 | _data_uri_template_png = u"""<img src="data:image/png;base64,%s" alt=%s />""" |
|
215 | 232 | |
|
216 | 233 | def latex_to_html(s, alt='image'): |
|
217 | 234 | """Render LaTeX to HTML with embedded PNG data using data URIs. |
|
218 | 235 | |
|
219 | 236 | Parameters |
|
220 | 237 | ---------- |
|
221 | 238 | s : str |
|
222 | 239 | The raw string containing valid inline LateX. |
|
223 | 240 | alt : str |
|
224 | 241 | The alt text to use for the HTML. |
|
225 | 242 | """ |
|
226 | 243 | base64_data = latex_to_png(s, encode=True).decode('ascii') |
|
227 | 244 | if base64_data: |
|
228 | 245 | return _data_uri_template_png % (base64_data, alt) |
|
229 | 246 | |
|
230 | 247 |
@@ -1,123 +1,122 | |||
|
1 | 1 | # encoding: utf-8 |
|
2 | 2 | """ |
|
3 | 3 | Utilities for timing code execution. |
|
4 | 4 | """ |
|
5 | 5 | |
|
6 | 6 | #----------------------------------------------------------------------------- |
|
7 | 7 | # Copyright (C) 2008-2011 The IPython Development Team |
|
8 | 8 | # |
|
9 | 9 | # Distributed under the terms of the BSD License. The full license is in |
|
10 | 10 | # the file COPYING, distributed as part of this software. |
|
11 | 11 | #----------------------------------------------------------------------------- |
|
12 | 12 | |
|
13 | 13 | #----------------------------------------------------------------------------- |
|
14 | 14 | # Imports |
|
15 | 15 | #----------------------------------------------------------------------------- |
|
16 | 16 | |
|
17 | 17 | import time |
|
18 | 18 | |
|
19 | 19 | #----------------------------------------------------------------------------- |
|
20 | 20 | # Code |
|
21 | 21 | #----------------------------------------------------------------------------- |
|
22 | 22 | |
|
23 | 23 | # If possible (Unix), use the resource module instead of time.clock() |
|
24 | 24 | try: |
|
25 | 25 | import resource |
|
26 | 26 | except ImportError: |
|
27 | 27 | resource = None |
|
28 | 28 | |
|
29 | 29 | # Some implementations (like jyputerlite) don't have getrusage |
|
30 | 30 | if resource is not None and hasattr(resource, "getrusage"): |
|
31 | 31 | def clocku(): |
|
32 | 32 | """clocku() -> floating point number |
|
33 | 33 | |
|
34 | 34 | Return the *USER* CPU time in seconds since the start of the process. |
|
35 | 35 | This is done via a call to resource.getrusage, so it avoids the |
|
36 | 36 | wraparound problems in time.clock().""" |
|
37 | 37 | |
|
38 | 38 | return resource.getrusage(resource.RUSAGE_SELF)[0] |
|
39 | 39 | |
|
40 | 40 | def clocks(): |
|
41 | 41 | """clocks() -> floating point number |
|
42 | 42 | |
|
43 | 43 | Return the *SYSTEM* CPU time in seconds since the start of the process. |
|
44 | 44 | This is done via a call to resource.getrusage, so it avoids the |
|
45 | 45 | wraparound problems in time.clock().""" |
|
46 | 46 | |
|
47 | 47 | return resource.getrusage(resource.RUSAGE_SELF)[1] |
|
48 | 48 | |
|
49 | 49 | def clock(): |
|
50 | 50 | """clock() -> floating point number |
|
51 | 51 | |
|
52 | 52 | Return the *TOTAL USER+SYSTEM* CPU time in seconds since the start of |
|
53 | 53 | the process. This is done via a call to resource.getrusage, so it |
|
54 | 54 | avoids the wraparound problems in time.clock().""" |
|
55 | 55 | |
|
56 | 56 | u,s = resource.getrusage(resource.RUSAGE_SELF)[:2] |
|
57 | 57 | return u+s |
|
58 | 58 | |
|
59 | 59 | def clock2(): |
|
60 | 60 | """clock2() -> (t_user,t_system) |
|
61 | 61 | |
|
62 | 62 | Similar to clock(), but return a tuple of user/system times.""" |
|
63 | 63 | return resource.getrusage(resource.RUSAGE_SELF)[:2] |
|
64 | 64 | |
|
65 | ||
|
66 | 65 | else: |
|
67 | 66 | # There is no distinction of user/system time under windows, so we just use |
|
68 | 67 | # time.perff_counter() for everything... |
|
69 | 68 | clocku = clocks = clock = time.perf_counter |
|
70 | 69 | def clock2(): |
|
71 | 70 | """Under windows, system CPU time can't be measured. |
|
72 | 71 | |
|
73 | 72 | This just returns perf_counter() and zero.""" |
|
74 | 73 | return time.perf_counter(),0.0 |
|
75 | 74 | |
|
76 | 75 | |
|
77 | 76 | def timings_out(reps,func,*args,**kw): |
|
78 | 77 | """timings_out(reps,func,*args,**kw) -> (t_total,t_per_call,output) |
|
79 | 78 | |
|
80 | 79 | Execute a function reps times, return a tuple with the elapsed total |
|
81 | 80 | CPU time in seconds, the time per call and the function's output. |
|
82 | 81 | |
|
83 | 82 | Under Unix, the return value is the sum of user+system time consumed by |
|
84 | 83 | the process, computed via the resource module. This prevents problems |
|
85 | 84 | related to the wraparound effect which the time.clock() function has. |
|
86 | 85 | |
|
87 | 86 | Under Windows the return value is in wall clock seconds. See the |
|
88 | 87 | documentation for the time module for more details.""" |
|
89 | 88 | |
|
90 | 89 | reps = int(reps) |
|
91 | 90 | assert reps >=1, 'reps must be >= 1' |
|
92 | 91 | if reps==1: |
|
93 | 92 | start = clock() |
|
94 | 93 | out = func(*args,**kw) |
|
95 | 94 | tot_time = clock()-start |
|
96 | 95 | else: |
|
97 | 96 | rng = range(reps-1) # the last time is executed separately to store output |
|
98 | 97 | start = clock() |
|
99 | 98 | for dummy in rng: func(*args,**kw) |
|
100 | 99 | out = func(*args,**kw) # one last time |
|
101 | 100 | tot_time = clock()-start |
|
102 | 101 | av_time = tot_time / reps |
|
103 | 102 | return tot_time,av_time,out |
|
104 | 103 | |
|
105 | 104 | |
|
106 | 105 | def timings(reps,func,*args,**kw): |
|
107 | 106 | """timings(reps,func,*args,**kw) -> (t_total,t_per_call) |
|
108 | 107 | |
|
109 | 108 | Execute a function reps times, return a tuple with the elapsed total CPU |
|
110 | 109 | time in seconds and the time per call. These are just the first two values |
|
111 | 110 | in timings_out().""" |
|
112 | 111 | |
|
113 | 112 | return timings_out(reps,func,*args,**kw)[0:2] |
|
114 | 113 | |
|
115 | 114 | |
|
116 | 115 | def timing(func,*args,**kw): |
|
117 | 116 | """timing(func,*args,**kw) -> t_total |
|
118 | 117 | |
|
119 | 118 | Execute a function once, return the elapsed total CPU time in |
|
120 | 119 | seconds. This is just the first value in timings_out().""" |
|
121 | 120 | |
|
122 | 121 | return timings_out(1,func,*args,**kw)[0] |
|
123 | 122 |
General Comments 0
You need to be logged in to leave comments.
Login now