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notebooks should always have one checkpoint...
notebooks should always have one checkpoint closes #4396

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filenbmanager.py
414 lines | 15.5 KiB | text/x-python | PythonLexer
"""A notebook manager that uses the local file system for storage.
Authors:
* Brian Granger
* Zach Sailer
"""
#-----------------------------------------------------------------------------
# Copyright (C) 2011 The IPython Development Team
#
# Distributed under the terms of the BSD License. The full license is in
# the file COPYING, distributed as part of this software.
#-----------------------------------------------------------------------------
#-----------------------------------------------------------------------------
# Imports
#-----------------------------------------------------------------------------
import io
import itertools
import os
import glob
import shutil
from tornado import web
from .nbmanager import NotebookManager
from IPython.nbformat import current
from IPython.utils.traitlets import Unicode, Dict, Bool, TraitError
from IPython.utils import tz
#-----------------------------------------------------------------------------
# Classes
#-----------------------------------------------------------------------------
class FileNotebookManager(NotebookManager):
save_script = Bool(False, config=True,
help="""Automatically create a Python script when saving the notebook.
For easier use of import, %run and %load across notebooks, a
<notebook-name>.py script will be created next to any
<notebook-name>.ipynb on each save. This can also be set with the
short `--script` flag.
"""
)
checkpoint_dir = Unicode(config=True,
help="""The location in which to keep notebook checkpoints
By default, it is notebook-dir/.ipynb_checkpoints
"""
)
def _checkpoint_dir_default(self):
return os.path.join(self.notebook_dir, '.ipynb_checkpoints')
def _checkpoint_dir_changed(self, name, old, new):
"""do a bit of validation of the checkpoint dir"""
if not os.path.isabs(new):
# If we receive a non-absolute path, make it absolute.
abs_new = os.path.abspath(new)
self.checkpoint_dir = abs_new
return
if os.path.exists(new) and not os.path.isdir(new):
raise TraitError("checkpoint dir %r is not a directory" % new)
if not os.path.exists(new):
self.log.info("Creating checkpoint dir %s", new)
try:
os.mkdir(new)
except:
raise TraitError("Couldn't create checkpoint dir %r" % new)
def get_notebook_names(self, path=''):
"""List all notebook names in the notebook dir and path."""
path = path.strip('/')
if not os.path.isdir(self.get_os_path(path=path)):
raise web.HTTPError(404, 'Directory not found: ' + path)
names = glob.glob(self.get_os_path('*'+self.filename_ext, path))
names = [os.path.basename(name)
for name in names]
return names
def increment_filename(self, basename, path='', ext='.ipynb'):
"""Return a non-used filename of the form basename<int>."""
path = path.strip('/')
for i in itertools.count():
name = u'{basename}{i}{ext}'.format(basename=basename, i=i, ext=ext)
os_path = self.get_os_path(name, path)
if not os.path.isfile(os_path):
break
return name
def path_exists(self, path):
"""Does the API-style path (directory) actually exist?
Parameters
----------
path : string
The path to check. This is an API path (`/` separated,
relative to base notebook-dir).
Returns
-------
exists : bool
Whether the path is indeed a directory.
"""
path = path.strip('/')
os_path = self.get_os_path(path=path)
return os.path.isdir(os_path)
def get_os_path(self, name=None, path=''):
"""Given a notebook name and a URL path, return its file system
path.
Parameters
----------
name : string
The name of a notebook file with the .ipynb extension
path : string
The relative URL path (with '/' as separator) to the named
notebook.
Returns
-------
path : string
A file system path that combines notebook_dir (location where
server started), the relative path, and the filename with the
current operating system's url.
"""
parts = path.strip('/').split('/')
parts = [p for p in parts if p != ''] # remove duplicate splits
if name is not None:
parts.append(name)
path = os.path.join(self.notebook_dir, *parts)
return path
def notebook_exists(self, name, path=''):
"""Returns a True if the notebook exists. Else, returns False.
Parameters
----------
name : string
The name of the notebook you are checking.
path : string
The relative path to the notebook (with '/' as separator)
Returns
-------
bool
"""
path = path.strip('/')
nbpath = self.get_os_path(name, path=path)
return os.path.isfile(nbpath)
def list_notebooks(self, path):
"""Returns a list of dictionaries that are the standard model
for all notebooks in the relative 'path'.
Parameters
----------
path : str
the URL path that describes the relative path for the
listed notebooks
Returns
-------
notebooks : list of dicts
a list of the notebook models without 'content'
"""
path = path.strip('/')
notebook_names = self.get_notebook_names(path)
notebooks = []
for name in notebook_names:
model = self.get_notebook_model(name, path, content=False)
notebooks.append(model)
notebooks = sorted(notebooks, key=lambda item: item['name'])
return notebooks
def get_notebook_model(self, name, path='', content=True):
""" Takes a path and name for a notebook and returns it's model
Parameters
----------
name : str
the name of the notebook
path : str
the URL path that describes the relative path for
the notebook
Returns
-------
model : dict
the notebook model. If contents=True, returns the 'contents'
dict in the model as well.
"""
path = path.strip('/')
if not self.notebook_exists(name=name, path=path):
raise web.HTTPError(404, u'Notebook does not exist: %s' % name)
os_path = self.get_os_path(name, path)
info = os.stat(os_path)
last_modified = tz.utcfromtimestamp(info.st_mtime)
created = tz.utcfromtimestamp(info.st_ctime)
# Create the notebook model.
model ={}
model['name'] = name
model['path'] = path
model['last_modified'] = last_modified
model['created'] = created
if content is True:
with io.open(os_path, 'r', encoding='utf-8') as f:
try:
nb = current.read(f, u'json')
except Exception as e:
raise web.HTTPError(400, u"Unreadable Notebook: %s %s" % (os_path, e))
model['content'] = nb
return model
def save_notebook_model(self, model, name='', path=''):
"""Save the notebook model and return the model with no content."""
path = path.strip('/')
if 'content' not in model:
raise web.HTTPError(400, u'No notebook JSON data provided')
# One checkpoint should always exist
if self.notebook_exists(name, path) and not self.list_checkpoints(name, path):
self.create_checkpoint(name, path)
new_path = model.get('path', path).strip('/')
new_name = model.get('name', name)
if path != new_path or name != new_name:
self.rename_notebook(name, path, new_name, new_path)
# Save the notebook file
os_path = self.get_os_path(new_name, new_path)
nb = current.to_notebook_json(model['content'])
if 'name' in nb['metadata']:
nb['metadata']['name'] = u''
try:
self.log.debug("Autosaving notebook %s", os_path)
with io.open(os_path, 'w', encoding='utf-8') as f:
current.write(nb, f, u'json')
except Exception as e:
raise web.HTTPError(400, u'Unexpected error while autosaving notebook: %s %s' % (os_path, e))
# Save .py script as well
if self.save_script:
py_path = os.path.splitext(os_path)[0] + '.py'
self.log.debug("Writing script %s", py_path)
try:
with io.open(py_path, 'w', encoding='utf-8') as f:
current.write(model, f, u'py')
except Exception as e:
raise web.HTTPError(400, u'Unexpected error while saving notebook as script: %s %s' % (py_path, e))
model = self.get_notebook_model(new_name, new_path, content=False)
return model
def update_notebook_model(self, model, name, path=''):
"""Update the notebook's path and/or name"""
path = path.strip('/')
new_name = model.get('name', name)
new_path = model.get('path', path).strip('/')
if path != new_path or name != new_name:
self.rename_notebook(name, path, new_name, new_path)
model = self.get_notebook_model(new_name, new_path, content=False)
return model
def delete_notebook_model(self, name, path=''):
"""Delete notebook by name and path."""
path = path.strip('/')
os_path = self.get_os_path(name, path)
if not os.path.isfile(os_path):
raise web.HTTPError(404, u'Notebook does not exist: %s' % os_path)
# clear checkpoints
for checkpoint in self.list_checkpoints(name, path):
checkpoint_id = checkpoint['id']
cp_path = self.get_checkpoint_path(checkpoint_id, name, path)
if os.path.isfile(cp_path):
self.log.debug("Unlinking checkpoint %s", cp_path)
os.unlink(cp_path)
self.log.debug("Unlinking notebook %s", os_path)
os.unlink(os_path)
def rename_notebook(self, old_name, old_path, new_name, new_path):
"""Rename a notebook."""
old_path = old_path.strip('/')
new_path = new_path.strip('/')
if new_name == old_name and new_path == old_path:
return
new_os_path = self.get_os_path(new_name, new_path)
old_os_path = self.get_os_path(old_name, old_path)
# Should we proceed with the move?
if os.path.isfile(new_os_path):
raise web.HTTPError(409, u'Notebook with name already exists: %s' % new_os_path)
if self.save_script:
old_py_path = os.path.splitext(old_os_path)[0] + '.py'
new_py_path = os.path.splitext(new_os_path)[0] + '.py'
if os.path.isfile(new_py_path):
raise web.HTTPError(409, u'Python script with name already exists: %s' % new_py_path)
# Move the notebook file
try:
os.rename(old_os_path, new_os_path)
except Exception as e:
raise web.HTTPError(500, u'Unknown error renaming notebook: %s %s' % (old_os_path, e))
# Move the checkpoints
old_checkpoints = self.list_checkpoints(old_name, old_path)
for cp in old_checkpoints:
checkpoint_id = cp['id']
old_cp_path = self.get_checkpoint_path(checkpoint_id, old_name, old_path)
new_cp_path = self.get_checkpoint_path(checkpoint_id, new_name, new_path)
if os.path.isfile(old_cp_path):
self.log.debug("Renaming checkpoint %s -> %s", old_cp_path, new_cp_path)
os.rename(old_cp_path, new_cp_path)
# Move the .py script
if self.save_script:
os.rename(old_py_path, new_py_path)
# Checkpoint-related utilities
def get_checkpoint_path(self, checkpoint_id, name, path=''):
"""find the path to a checkpoint"""
path = path.strip('/')
basename, _ = os.path.splitext(name)
filename = u"{name}-{checkpoint_id}{ext}".format(
name=basename,
checkpoint_id=checkpoint_id,
ext=self.filename_ext,
)
cp_path = os.path.join(path, self.checkpoint_dir, filename)
return cp_path
def get_checkpoint_model(self, checkpoint_id, name, path=''):
"""construct the info dict for a given checkpoint"""
path = path.strip('/')
cp_path = self.get_checkpoint_path(checkpoint_id, name, path)
stats = os.stat(cp_path)
last_modified = tz.utcfromtimestamp(stats.st_mtime)
info = dict(
id = checkpoint_id,
last_modified = last_modified,
)
return info
# public checkpoint API
def create_checkpoint(self, name, path=''):
"""Create a checkpoint from the current state of a notebook"""
path = path.strip('/')
nb_path = self.get_os_path(name, path)
# only the one checkpoint ID:
checkpoint_id = u"checkpoint"
cp_path = self.get_checkpoint_path(checkpoint_id, name, path)
self.log.debug("creating checkpoint for notebook %s", name)
if not os.path.exists(self.checkpoint_dir):
os.mkdir(self.checkpoint_dir)
shutil.copy2(nb_path, cp_path)
# return the checkpoint info
return self.get_checkpoint_model(checkpoint_id, name, path)
def list_checkpoints(self, name, path=''):
"""list the checkpoints for a given notebook
This notebook manager currently only supports one checkpoint per notebook.
"""
path = path.strip('/')
checkpoint_id = "checkpoint"
path = self.get_checkpoint_path(checkpoint_id, name, path)
if not os.path.exists(path):
return []
else:
return [self.get_checkpoint_model(checkpoint_id, name, path)]
def restore_checkpoint(self, checkpoint_id, name, path=''):
"""restore a notebook to a checkpointed state"""
path = path.strip('/')
self.log.info("restoring Notebook %s from checkpoint %s", name, checkpoint_id)
nb_path = self.get_os_path(name, path)
cp_path = self.get_checkpoint_path(checkpoint_id, name, path)
if not os.path.isfile(cp_path):
self.log.debug("checkpoint file does not exist: %s", cp_path)
raise web.HTTPError(404,
u'Notebook checkpoint does not exist: %s-%s' % (name, checkpoint_id)
)
# ensure notebook is readable (never restore from an unreadable notebook)
with io.open(cp_path, 'r', encoding='utf-8') as f:
nb = current.read(f, u'json')
shutil.copy2(cp_path, nb_path)
self.log.debug("copying %s -> %s", cp_path, nb_path)
def delete_checkpoint(self, checkpoint_id, name, path=''):
"""delete a notebook's checkpoint"""
path = path.strip('/')
cp_path = self.get_checkpoint_path(checkpoint_id, name, path)
if not os.path.isfile(cp_path):
raise web.HTTPError(404,
u'Notebook checkpoint does not exist: %s%s-%s' % (path, name, checkpoint_id)
)
self.log.debug("unlinking %s", cp_path)
os.unlink(cp_path)
def info_string(self):
return "Serving notebooks from local directory: %s" % self.notebook_dir