|
|
"""Nose Plugin that supports IPython doctests.
|
|
|
|
|
|
Limitations:
|
|
|
|
|
|
- When generating examples for use as doctests, make sure that you have
|
|
|
pretty-printing OFF. This can be done either by setting the
|
|
|
``PlainTextFormatter.pprint`` option in your configuration file to False, or
|
|
|
by interactively disabling it with %Pprint. This is required so that IPython
|
|
|
output matches that of normal Python, which is used by doctest for internal
|
|
|
execution.
|
|
|
|
|
|
- Do not rely on specific prompt numbers for results (such as using
|
|
|
'_34==True', for example). For IPython tests run via an external process the
|
|
|
prompt numbers may be different, and IPython tests run as normal python code
|
|
|
won't even have these special _NN variables set at all.
|
|
|
"""
|
|
|
|
|
|
#-----------------------------------------------------------------------------
|
|
|
# Module imports
|
|
|
|
|
|
# From the standard library
|
|
|
import doctest
|
|
|
import inspect
|
|
|
import logging
|
|
|
import os
|
|
|
import re
|
|
|
|
|
|
from testpath import modified_env
|
|
|
|
|
|
#-----------------------------------------------------------------------------
|
|
|
# Module globals and other constants
|
|
|
#-----------------------------------------------------------------------------
|
|
|
|
|
|
log = logging.getLogger(__name__)
|
|
|
|
|
|
|
|
|
#-----------------------------------------------------------------------------
|
|
|
# Classes and functions
|
|
|
#-----------------------------------------------------------------------------
|
|
|
|
|
|
def is_extension_module(filename):
|
|
|
"""Return whether the given filename is an extension module.
|
|
|
|
|
|
This simply checks that the extension is either .so or .pyd.
|
|
|
"""
|
|
|
return os.path.splitext(filename)[1].lower() in ('.so','.pyd')
|
|
|
|
|
|
|
|
|
class DocTestSkip(object):
|
|
|
"""Object wrapper for doctests to be skipped."""
|
|
|
|
|
|
ds_skip = """Doctest to skip.
|
|
|
>>> 1 #doctest: +SKIP
|
|
|
"""
|
|
|
|
|
|
def __init__(self,obj):
|
|
|
self.obj = obj
|
|
|
|
|
|
def __getattribute__(self,key):
|
|
|
if key == '__doc__':
|
|
|
return DocTestSkip.ds_skip
|
|
|
else:
|
|
|
return getattr(object.__getattribute__(self,'obj'),key)
|
|
|
|
|
|
# Modified version of the one in the stdlib, that fixes a python bug (doctests
|
|
|
# not found in extension modules, http://bugs.python.org/issue3158)
|
|
|
class DocTestFinder(doctest.DocTestFinder):
|
|
|
|
|
|
def _from_module(self, module, object):
|
|
|
"""
|
|
|
Return true if the given object is defined in the given
|
|
|
module.
|
|
|
"""
|
|
|
if module is None:
|
|
|
return True
|
|
|
elif inspect.isfunction(object):
|
|
|
return module.__dict__ is object.__globals__
|
|
|
elif inspect.isbuiltin(object):
|
|
|
return module.__name__ == object.__module__
|
|
|
elif inspect.isclass(object):
|
|
|
return module.__name__ == object.__module__
|
|
|
elif inspect.ismethod(object):
|
|
|
# This one may be a bug in cython that fails to correctly set the
|
|
|
# __module__ attribute of methods, but since the same error is easy
|
|
|
# to make by extension code writers, having this safety in place
|
|
|
# isn't such a bad idea
|
|
|
return module.__name__ == object.__self__.__class__.__module__
|
|
|
elif inspect.getmodule(object) is not None:
|
|
|
return module is inspect.getmodule(object)
|
|
|
elif hasattr(object, '__module__'):
|
|
|
return module.__name__ == object.__module__
|
|
|
elif isinstance(object, property):
|
|
|
return True # [XX] no way not be sure.
|
|
|
elif inspect.ismethoddescriptor(object):
|
|
|
# Unbound PyQt signals reach this point in Python 3.4b3, and we want
|
|
|
# to avoid throwing an error. See also http://bugs.python.org/issue3158
|
|
|
return False
|
|
|
else:
|
|
|
raise ValueError("object must be a class or function, got %r" % object)
|
|
|
|
|
|
def _find(self, tests, obj, name, module, source_lines, globs, seen):
|
|
|
"""
|
|
|
Find tests for the given object and any contained objects, and
|
|
|
add them to `tests`.
|
|
|
"""
|
|
|
print('_find for:', obj, name, module) # dbg
|
|
|
if bool(getattr(obj, "__skip_doctest__", False)):
|
|
|
#print 'SKIPPING DOCTEST FOR:',obj # dbg
|
|
|
obj = DocTestSkip(obj)
|
|
|
|
|
|
doctest.DocTestFinder._find(self,tests, obj, name, module,
|
|
|
source_lines, globs, seen)
|
|
|
|
|
|
# Below we re-run pieces of the above method with manual modifications,
|
|
|
# because the original code is buggy and fails to correctly identify
|
|
|
# doctests in extension modules.
|
|
|
|
|
|
# Local shorthands
|
|
|
from inspect import isroutine, isclass
|
|
|
|
|
|
# Look for tests in a module's contained objects.
|
|
|
if inspect.ismodule(obj) and self._recurse:
|
|
|
for valname, val in obj.__dict__.items():
|
|
|
valname1 = '%s.%s' % (name, valname)
|
|
|
if ( (isroutine(val) or isclass(val))
|
|
|
and self._from_module(module, val) ):
|
|
|
|
|
|
self._find(tests, val, valname1, module, source_lines,
|
|
|
globs, seen)
|
|
|
|
|
|
# Look for tests in a class's contained objects.
|
|
|
if inspect.isclass(obj) and self._recurse:
|
|
|
#print 'RECURSE into class:',obj # dbg
|
|
|
for valname, val in obj.__dict__.items():
|
|
|
# Special handling for staticmethod/classmethod.
|
|
|
if isinstance(val, staticmethod):
|
|
|
val = getattr(obj, valname)
|
|
|
if isinstance(val, classmethod):
|
|
|
val = getattr(obj, valname).__func__
|
|
|
|
|
|
# Recurse to methods, properties, and nested classes.
|
|
|
if ((inspect.isfunction(val) or inspect.isclass(val) or
|
|
|
inspect.ismethod(val) or
|
|
|
isinstance(val, property)) and
|
|
|
self._from_module(module, val)):
|
|
|
valname = '%s.%s' % (name, valname)
|
|
|
self._find(tests, val, valname, module, source_lines,
|
|
|
globs, seen)
|
|
|
|
|
|
|
|
|
class IPDoctestOutputChecker(doctest.OutputChecker):
|
|
|
"""Second-chance checker with support for random tests.
|
|
|
|
|
|
If the default comparison doesn't pass, this checker looks in the expected
|
|
|
output string for flags that tell us to ignore the output.
|
|
|
"""
|
|
|
|
|
|
random_re = re.compile(r'#\s*random\s+')
|
|
|
|
|
|
def check_output(self, want, got, optionflags):
|
|
|
"""Check output, accepting special markers embedded in the output.
|
|
|
|
|
|
If the output didn't pass the default validation but the special string
|
|
|
'#random' is included, we accept it."""
|
|
|
|
|
|
# Let the original tester verify first, in case people have valid tests
|
|
|
# that happen to have a comment saying '#random' embedded in.
|
|
|
ret = doctest.OutputChecker.check_output(self, want, got,
|
|
|
optionflags)
|
|
|
if not ret and self.random_re.search(want):
|
|
|
#print >> sys.stderr, 'RANDOM OK:',want # dbg
|
|
|
return True
|
|
|
|
|
|
return ret
|
|
|
|
|
|
|
|
|
# A simple subclassing of the original with a different class name, so we can
|
|
|
# distinguish and treat differently IPython examples from pure python ones.
|
|
|
class IPExample(doctest.Example): pass
|
|
|
|
|
|
|
|
|
class IPExternalExample(doctest.Example):
|
|
|
"""Doctest examples to be run in an external process."""
|
|
|
|
|
|
def __init__(self, source, want, exc_msg=None, lineno=0, indent=0,
|
|
|
options=None):
|
|
|
# Parent constructor
|
|
|
doctest.Example.__init__(self,source,want,exc_msg,lineno,indent,options)
|
|
|
|
|
|
# An EXTRA newline is needed to prevent pexpect hangs
|
|
|
self.source += '\n'
|
|
|
|
|
|
|
|
|
class IPDocTestParser(doctest.DocTestParser):
|
|
|
"""
|
|
|
A class used to parse strings containing doctest examples.
|
|
|
|
|
|
Note: This is a version modified to properly recognize IPython input and
|
|
|
convert any IPython examples into valid Python ones.
|
|
|
"""
|
|
|
# This regular expression is used to find doctest examples in a
|
|
|
# string. It defines three groups: `source` is the source code
|
|
|
# (including leading indentation and prompts); `indent` is the
|
|
|
# indentation of the first (PS1) line of the source code; and
|
|
|
# `want` is the expected output (including leading indentation).
|
|
|
|
|
|
# Classic Python prompts or default IPython ones
|
|
|
_PS1_PY = r'>>>'
|
|
|
_PS2_PY = r'\.\.\.'
|
|
|
|
|
|
_PS1_IP = r'In\ \[\d+\]:'
|
|
|
_PS2_IP = r'\ \ \ \.\.\.+:'
|
|
|
|
|
|
_RE_TPL = r'''
|
|
|
# Source consists of a PS1 line followed by zero or more PS2 lines.
|
|
|
(?P<source>
|
|
|
(?:^(?P<indent> [ ]*) (?P<ps1> %s) .*) # PS1 line
|
|
|
(?:\n [ ]* (?P<ps2> %s) .*)*) # PS2 lines
|
|
|
\n? # a newline
|
|
|
# Want consists of any non-blank lines that do not start with PS1.
|
|
|
(?P<want> (?:(?![ ]*$) # Not a blank line
|
|
|
(?![ ]*%s) # Not a line starting with PS1
|
|
|
(?![ ]*%s) # Not a line starting with PS2
|
|
|
.*$\n? # But any other line
|
|
|
)*)
|
|
|
'''
|
|
|
|
|
|
_EXAMPLE_RE_PY = re.compile( _RE_TPL % (_PS1_PY,_PS2_PY,_PS1_PY,_PS2_PY),
|
|
|
re.MULTILINE | re.VERBOSE)
|
|
|
|
|
|
_EXAMPLE_RE_IP = re.compile( _RE_TPL % (_PS1_IP,_PS2_IP,_PS1_IP,_PS2_IP),
|
|
|
re.MULTILINE | re.VERBOSE)
|
|
|
|
|
|
# Mark a test as being fully random. In this case, we simply append the
|
|
|
# random marker ('#random') to each individual example's output. This way
|
|
|
# we don't need to modify any other code.
|
|
|
_RANDOM_TEST = re.compile(r'#\s*all-random\s+')
|
|
|
|
|
|
# Mark tests to be executed in an external process - currently unsupported.
|
|
|
_EXTERNAL_IP = re.compile(r'#\s*ipdoctest:\s*EXTERNAL')
|
|
|
|
|
|
def ip2py(self,source):
|
|
|
"""Convert input IPython source into valid Python."""
|
|
|
block = _ip.input_transformer_manager.transform_cell(source)
|
|
|
if len(block.splitlines()) == 1:
|
|
|
return _ip.prefilter(block)
|
|
|
else:
|
|
|
return block
|
|
|
|
|
|
def parse(self, string, name='<string>'):
|
|
|
"""
|
|
|
Divide the given string into examples and intervening text,
|
|
|
and return them as a list of alternating Examples and strings.
|
|
|
Line numbers for the Examples are 0-based. The optional
|
|
|
argument `name` is a name identifying this string, and is only
|
|
|
used for error messages.
|
|
|
"""
|
|
|
|
|
|
#print 'Parse string:\n',string # dbg
|
|
|
|
|
|
string = string.expandtabs()
|
|
|
# If all lines begin with the same indentation, then strip it.
|
|
|
min_indent = self._min_indent(string)
|
|
|
if min_indent > 0:
|
|
|
string = '\n'.join([l[min_indent:] for l in string.split('\n')])
|
|
|
|
|
|
output = []
|
|
|
charno, lineno = 0, 0
|
|
|
|
|
|
# We make 'all random' tests by adding the '# random' mark to every
|
|
|
# block of output in the test.
|
|
|
if self._RANDOM_TEST.search(string):
|
|
|
random_marker = '\n# random'
|
|
|
else:
|
|
|
random_marker = ''
|
|
|
|
|
|
# Whether to convert the input from ipython to python syntax
|
|
|
ip2py = False
|
|
|
# Find all doctest examples in the string. First, try them as Python
|
|
|
# examples, then as IPython ones
|
|
|
terms = list(self._EXAMPLE_RE_PY.finditer(string))
|
|
|
if terms:
|
|
|
# Normal Python example
|
|
|
#print '-'*70 # dbg
|
|
|
#print 'PyExample, Source:\n',string # dbg
|
|
|
#print '-'*70 # dbg
|
|
|
Example = doctest.Example
|
|
|
else:
|
|
|
# It's an ipython example. Note that IPExamples are run
|
|
|
# in-process, so their syntax must be turned into valid python.
|
|
|
# IPExternalExamples are run out-of-process (via pexpect) so they
|
|
|
# don't need any filtering (a real ipython will be executing them).
|
|
|
terms = list(self._EXAMPLE_RE_IP.finditer(string))
|
|
|
if self._EXTERNAL_IP.search(string):
|
|
|
#print '-'*70 # dbg
|
|
|
#print 'IPExternalExample, Source:\n',string # dbg
|
|
|
#print '-'*70 # dbg
|
|
|
Example = IPExternalExample
|
|
|
else:
|
|
|
#print '-'*70 # dbg
|
|
|
#print 'IPExample, Source:\n',string # dbg
|
|
|
#print '-'*70 # dbg
|
|
|
Example = IPExample
|
|
|
ip2py = True
|
|
|
|
|
|
for m in terms:
|
|
|
# Add the pre-example text to `output`.
|
|
|
output.append(string[charno:m.start()])
|
|
|
# Update lineno (lines before this example)
|
|
|
lineno += string.count('\n', charno, m.start())
|
|
|
# Extract info from the regexp match.
|
|
|
(source, options, want, exc_msg) = \
|
|
|
self._parse_example(m, name, lineno,ip2py)
|
|
|
|
|
|
# Append the random-output marker (it defaults to empty in most
|
|
|
# cases, it's only non-empty for 'all-random' tests):
|
|
|
want += random_marker
|
|
|
|
|
|
if Example is IPExternalExample:
|
|
|
options[doctest.NORMALIZE_WHITESPACE] = True
|
|
|
want += '\n'
|
|
|
|
|
|
# Create an Example, and add it to the list.
|
|
|
if not self._IS_BLANK_OR_COMMENT(source):
|
|
|
output.append(Example(source, want, exc_msg,
|
|
|
lineno=lineno,
|
|
|
indent=min_indent+len(m.group('indent')),
|
|
|
options=options))
|
|
|
# Update lineno (lines inside this example)
|
|
|
lineno += string.count('\n', m.start(), m.end())
|
|
|
# Update charno.
|
|
|
charno = m.end()
|
|
|
# Add any remaining post-example text to `output`.
|
|
|
output.append(string[charno:])
|
|
|
return output
|
|
|
|
|
|
def _parse_example(self, m, name, lineno,ip2py=False):
|
|
|
"""
|
|
|
Given a regular expression match from `_EXAMPLE_RE` (`m`),
|
|
|
return a pair `(source, want)`, where `source` is the matched
|
|
|
example's source code (with prompts and indentation stripped);
|
|
|
and `want` is the example's expected output (with indentation
|
|
|
stripped).
|
|
|
|
|
|
`name` is the string's name, and `lineno` is the line number
|
|
|
where the example starts; both are used for error messages.
|
|
|
|
|
|
Optional:
|
|
|
`ip2py`: if true, filter the input via IPython to convert the syntax
|
|
|
into valid python.
|
|
|
"""
|
|
|
|
|
|
# Get the example's indentation level.
|
|
|
indent = len(m.group('indent'))
|
|
|
|
|
|
# Divide source into lines; check that they're properly
|
|
|
# indented; and then strip their indentation & prompts.
|
|
|
source_lines = m.group('source').split('\n')
|
|
|
|
|
|
# We're using variable-length input prompts
|
|
|
ps1 = m.group('ps1')
|
|
|
ps2 = m.group('ps2')
|
|
|
ps1_len = len(ps1)
|
|
|
|
|
|
self._check_prompt_blank(source_lines, indent, name, lineno,ps1_len)
|
|
|
if ps2:
|
|
|
self._check_prefix(source_lines[1:], ' '*indent + ps2, name, lineno)
|
|
|
|
|
|
source = '\n'.join([sl[indent+ps1_len+1:] for sl in source_lines])
|
|
|
|
|
|
if ip2py:
|
|
|
# Convert source input from IPython into valid Python syntax
|
|
|
source = self.ip2py(source)
|
|
|
|
|
|
# Divide want into lines; check that it's properly indented; and
|
|
|
# then strip the indentation. Spaces before the last newline should
|
|
|
# be preserved, so plain rstrip() isn't good enough.
|
|
|
want = m.group('want')
|
|
|
want_lines = want.split('\n')
|
|
|
if len(want_lines) > 1 and re.match(r' *$', want_lines[-1]):
|
|
|
del want_lines[-1] # forget final newline & spaces after it
|
|
|
self._check_prefix(want_lines, ' '*indent, name,
|
|
|
lineno + len(source_lines))
|
|
|
|
|
|
# Remove ipython output prompt that might be present in the first line
|
|
|
want_lines[0] = re.sub(r'Out\[\d+\]: \s*?\n?','',want_lines[0])
|
|
|
|
|
|
want = '\n'.join([wl[indent:] for wl in want_lines])
|
|
|
|
|
|
# If `want` contains a traceback message, then extract it.
|
|
|
m = self._EXCEPTION_RE.match(want)
|
|
|
if m:
|
|
|
exc_msg = m.group('msg')
|
|
|
else:
|
|
|
exc_msg = None
|
|
|
|
|
|
# Extract options from the source.
|
|
|
options = self._find_options(source, name, lineno)
|
|
|
|
|
|
return source, options, want, exc_msg
|
|
|
|
|
|
def _check_prompt_blank(self, lines, indent, name, lineno, ps1_len):
|
|
|
"""
|
|
|
Given the lines of a source string (including prompts and
|
|
|
leading indentation), check to make sure that every prompt is
|
|
|
followed by a space character. If any line is not followed by
|
|
|
a space character, then raise ValueError.
|
|
|
|
|
|
Note: IPython-modified version which takes the input prompt length as a
|
|
|
parameter, so that prompts of variable length can be dealt with.
|
|
|
"""
|
|
|
space_idx = indent+ps1_len
|
|
|
min_len = space_idx+1
|
|
|
for i, line in enumerate(lines):
|
|
|
if len(line) >= min_len and line[space_idx] != ' ':
|
|
|
raise ValueError('line %r of the docstring for %s '
|
|
|
'lacks blank after %s: %r' %
|
|
|
(lineno+i+1, name,
|
|
|
line[indent:space_idx], line))
|
|
|
|
|
|
|
|
|
SKIP = doctest.register_optionflag('SKIP')
|
|
|
|
|
|
|
|
|
class IPDocTestRunner(doctest.DocTestRunner,object):
|
|
|
"""Test runner that synchronizes the IPython namespace with test globals.
|
|
|
"""
|
|
|
|
|
|
def run(self, test, compileflags=None, out=None, clear_globs=True):
|
|
|
|
|
|
# Hack: ipython needs access to the execution context of the example,
|
|
|
# so that it can propagate user variables loaded by %run into
|
|
|
# test.globs. We put them here into our modified %run as a function
|
|
|
# attribute. Our new %run will then only make the namespace update
|
|
|
# when called (rather than unconditionally updating test.globs here
|
|
|
# for all examples, most of which won't be calling %run anyway).
|
|
|
#_ip._ipdoctest_test_globs = test.globs
|
|
|
#_ip._ipdoctest_test_filename = test.filename
|
|
|
|
|
|
test.globs.update(_ip.user_ns)
|
|
|
|
|
|
# Override terminal size to standardise traceback format
|
|
|
with modified_env({'COLUMNS': '80', 'LINES': '24'}):
|
|
|
return super(IPDocTestRunner,self).run(test,
|
|
|
compileflags,out,clear_globs)
|
|
|
|
|
|
|
|
|
class DocFileCase(doctest.DocFileCase):
|
|
|
"""Overrides to provide filename
|
|
|
"""
|
|
|
def address(self):
|
|
|
return (self._dt_test.filename, None, None)
|
|
|
|
