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Make copy of notebook node object to make sure the source doesn't get modified
Make copy of notebook node object to make sure the source doesn't get modified

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winhpcjob.py
319 lines | 11.4 KiB | text/x-python | PythonLexer
# encoding: utf-8
"""
Job and task components for writing .xml files that the Windows HPC Server
2008 can use to start jobs.
Authors:
* Brian Granger
* MinRK
"""
#-----------------------------------------------------------------------------
# Copyright (C) 2008-2011 The IPython Development Team
#
# Distributed under the terms of the BSD License. The full license is in
# the file COPYING, distributed as part of this software.
#-----------------------------------------------------------------------------
#-----------------------------------------------------------------------------
# Imports
#-----------------------------------------------------------------------------
import os
import re
import uuid
from xml.etree import ElementTree as ET
from IPython.config.configurable import Configurable
from IPython.utils.traitlets import (
Unicode, Integer, List, Instance,
Enum, Bool
)
#-----------------------------------------------------------------------------
# Job and Task classes
#-----------------------------------------------------------------------------
def as_str(value):
if isinstance(value, str):
return value
elif isinstance(value, bool):
if value:
return 'true'
else:
return 'false'
elif isinstance(value, (int, float)):
return repr(value)
else:
return value
def indent(elem, level=0):
i = "\n" + level*" "
if len(elem):
if not elem.text or not elem.text.strip():
elem.text = i + " "
if not elem.tail or not elem.tail.strip():
elem.tail = i
for elem in elem:
indent(elem, level+1)
if not elem.tail or not elem.tail.strip():
elem.tail = i
else:
if level and (not elem.tail or not elem.tail.strip()):
elem.tail = i
def find_username():
domain = os.environ.get('USERDOMAIN')
username = os.environ.get('USERNAME','')
if domain is None:
return username
else:
return '%s\\%s' % (domain, username)
class WinHPCJob(Configurable):
job_id = Unicode('')
job_name = Unicode('MyJob', config=True)
min_cores = Integer(1, config=True)
max_cores = Integer(1, config=True)
min_sockets = Integer(1, config=True)
max_sockets = Integer(1, config=True)
min_nodes = Integer(1, config=True)
max_nodes = Integer(1, config=True)
unit_type = Unicode("Core", config=True)
auto_calculate_min = Bool(True, config=True)
auto_calculate_max = Bool(True, config=True)
run_until_canceled = Bool(False, config=True)
is_exclusive = Bool(False, config=True)
username = Unicode(find_username(), config=True)
job_type = Unicode('Batch', config=True)
priority = Enum(('Lowest','BelowNormal','Normal','AboveNormal','Highest'),
default_value='Highest', config=True)
requested_nodes = Unicode('', config=True)
project = Unicode('IPython', config=True)
xmlns = Unicode('http://schemas.microsoft.com/HPCS2008/scheduler/')
version = Unicode("2.000")
tasks = List([])
@property
def owner(self):
return self.username
def _write_attr(self, root, attr, key):
s = as_str(getattr(self, attr, ''))
if s:
root.set(key, s)
def as_element(self):
# We have to add _A_ type things to get the right order than
# the MSFT XML parser expects.
root = ET.Element('Job')
self._write_attr(root, 'version', '_A_Version')
self._write_attr(root, 'job_name', '_B_Name')
self._write_attr(root, 'unit_type', '_C_UnitType')
self._write_attr(root, 'min_cores', '_D_MinCores')
self._write_attr(root, 'max_cores', '_E_MaxCores')
self._write_attr(root, 'min_sockets', '_F_MinSockets')
self._write_attr(root, 'max_sockets', '_G_MaxSockets')
self._write_attr(root, 'min_nodes', '_H_MinNodes')
self._write_attr(root, 'max_nodes', '_I_MaxNodes')
self._write_attr(root, 'run_until_canceled', '_J_RunUntilCanceled')
self._write_attr(root, 'is_exclusive', '_K_IsExclusive')
self._write_attr(root, 'username', '_L_UserName')
self._write_attr(root, 'job_type', '_M_JobType')
self._write_attr(root, 'priority', '_N_Priority')
self._write_attr(root, 'requested_nodes', '_O_RequestedNodes')
self._write_attr(root, 'auto_calculate_max', '_P_AutoCalculateMax')
self._write_attr(root, 'auto_calculate_min', '_Q_AutoCalculateMin')
self._write_attr(root, 'project', '_R_Project')
self._write_attr(root, 'owner', '_S_Owner')
self._write_attr(root, 'xmlns', '_T_xmlns')
dependencies = ET.SubElement(root, "Dependencies")
etasks = ET.SubElement(root, "Tasks")
for t in self.tasks:
etasks.append(t.as_element())
return root
def tostring(self):
"""Return the string representation of the job description XML."""
root = self.as_element()
indent(root)
txt = ET.tostring(root, encoding="utf-8")
# Now remove the tokens used to order the attributes.
txt = re.sub(r'_[A-Z]_','',txt)
txt = '<?xml version="1.0" encoding="utf-8"?>\n' + txt
return txt
def write(self, filename):
"""Write the XML job description to a file."""
txt = self.tostring()
with open(filename, 'w') as f:
f.write(txt)
def add_task(self, task):
"""Add a task to the job.
Parameters
----------
task : :class:`WinHPCTask`
The task object to add.
"""
self.tasks.append(task)
class WinHPCTask(Configurable):
task_id = Unicode('')
task_name = Unicode('')
version = Unicode("2.000")
min_cores = Integer(1, config=True)
max_cores = Integer(1, config=True)
min_sockets = Integer(1, config=True)
max_sockets = Integer(1, config=True)
min_nodes = Integer(1, config=True)
max_nodes = Integer(1, config=True)
unit_type = Unicode("Core", config=True)
command_line = Unicode('', config=True)
work_directory = Unicode('', config=True)
is_rerunnaable = Bool(True, config=True)
std_out_file_path = Unicode('', config=True)
std_err_file_path = Unicode('', config=True)
is_parametric = Bool(False, config=True)
environment_variables = Instance(dict, args=(), config=True)
def _write_attr(self, root, attr, key):
s = as_str(getattr(self, attr, ''))
if s:
root.set(key, s)
def as_element(self):
root = ET.Element('Task')
self._write_attr(root, 'version', '_A_Version')
self._write_attr(root, 'task_name', '_B_Name')
self._write_attr(root, 'min_cores', '_C_MinCores')
self._write_attr(root, 'max_cores', '_D_MaxCores')
self._write_attr(root, 'min_sockets', '_E_MinSockets')
self._write_attr(root, 'max_sockets', '_F_MaxSockets')
self._write_attr(root, 'min_nodes', '_G_MinNodes')
self._write_attr(root, 'max_nodes', '_H_MaxNodes')
self._write_attr(root, 'command_line', '_I_CommandLine')
self._write_attr(root, 'work_directory', '_J_WorkDirectory')
self._write_attr(root, 'is_rerunnaable', '_K_IsRerunnable')
self._write_attr(root, 'std_out_file_path', '_L_StdOutFilePath')
self._write_attr(root, 'std_err_file_path', '_M_StdErrFilePath')
self._write_attr(root, 'is_parametric', '_N_IsParametric')
self._write_attr(root, 'unit_type', '_O_UnitType')
root.append(self.get_env_vars())
return root
def get_env_vars(self):
env_vars = ET.Element('EnvironmentVariables')
for k, v in self.environment_variables.iteritems():
variable = ET.SubElement(env_vars, "Variable")
name = ET.SubElement(variable, "Name")
name.text = k
value = ET.SubElement(variable, "Value")
value.text = v
return env_vars
# By declaring these, we can configure the controller and engine separately!
class IPControllerJob(WinHPCJob):
job_name = Unicode('IPController', config=False)
is_exclusive = Bool(False, config=True)
username = Unicode(find_username(), config=True)
priority = Enum(('Lowest','BelowNormal','Normal','AboveNormal','Highest'),
default_value='Highest', config=True)
requested_nodes = Unicode('', config=True)
project = Unicode('IPython', config=True)
class IPEngineSetJob(WinHPCJob):
job_name = Unicode('IPEngineSet', config=False)
is_exclusive = Bool(False, config=True)
username = Unicode(find_username(), config=True)
priority = Enum(('Lowest','BelowNormal','Normal','AboveNormal','Highest'),
default_value='Highest', config=True)
requested_nodes = Unicode('', config=True)
project = Unicode('IPython', config=True)
class IPControllerTask(WinHPCTask):
task_name = Unicode('IPController', config=True)
controller_cmd = List(['ipcontroller.exe'], config=True)
controller_args = List(['--log-to-file', '--log-level=40'], config=True)
# I don't want these to be configurable
std_out_file_path = Unicode('', config=False)
std_err_file_path = Unicode('', config=False)
min_cores = Integer(1, config=False)
max_cores = Integer(1, config=False)
min_sockets = Integer(1, config=False)
max_sockets = Integer(1, config=False)
min_nodes = Integer(1, config=False)
max_nodes = Integer(1, config=False)
unit_type = Unicode("Core", config=False)
work_directory = Unicode('', config=False)
def __init__(self, config=None):
super(IPControllerTask, self).__init__(config=config)
the_uuid = uuid.uuid1()
self.std_out_file_path = os.path.join('log','ipcontroller-%s.out' % the_uuid)
self.std_err_file_path = os.path.join('log','ipcontroller-%s.err' % the_uuid)
@property
def command_line(self):
return ' '.join(self.controller_cmd + self.controller_args)
class IPEngineTask(WinHPCTask):
task_name = Unicode('IPEngine', config=True)
engine_cmd = List(['ipengine.exe'], config=True)
engine_args = List(['--log-to-file', '--log-level=40'], config=True)
# I don't want these to be configurable
std_out_file_path = Unicode('', config=False)
std_err_file_path = Unicode('', config=False)
min_cores = Integer(1, config=False)
max_cores = Integer(1, config=False)
min_sockets = Integer(1, config=False)
max_sockets = Integer(1, config=False)
min_nodes = Integer(1, config=False)
max_nodes = Integer(1, config=False)
unit_type = Unicode("Core", config=False)
work_directory = Unicode('', config=False)
def __init__(self, config=None):
super(IPEngineTask,self).__init__(config=config)
the_uuid = uuid.uuid1()
self.std_out_file_path = os.path.join('log','ipengine-%s.out' % the_uuid)
self.std_err_file_path = os.path.join('log','ipengine-%s.err' % the_uuid)
@property
def command_line(self):
return ' '.join(self.engine_cmd + self.engine_args)
# j = WinHPCJob(None)
# j.job_name = 'IPCluster'
# j.username = 'GNET\\bgranger'
# j.requested_nodes = 'GREEN'
#
# t = WinHPCTask(None)
# t.task_name = 'Controller'
# t.command_line = r"\\blue\domainusers$\bgranger\Python\Python25\Scripts\ipcontroller.exe --log-to-file -p default --log-level 10"
# t.work_directory = r"\\blue\domainusers$\bgranger\.ipython\cluster_default"
# t.std_out_file_path = 'controller-out.txt'
# t.std_err_file_path = 'controller-err.txt'
# t.environment_variables['PYTHONPATH'] = r"\\blue\domainusers$\bgranger\Python\Python25\Lib\site-packages"
# j.add_task(t)