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Tided up queue configuration(no support in Condor)
Tided up queue configuration(no support in Condor)

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iostream.py
219 lines | 7.3 KiB | text/x-python | PythonLexer
"""wrappers for stdout/stderr forwarding over zmq
"""
#-----------------------------------------------------------------------------
# Copyright (C) 2013 The IPython Development Team
#
# Distributed under the terms of the BSD License. The full license is in
# the file COPYING, distributed as part of this software.
#-----------------------------------------------------------------------------
import os
import threading
import time
import uuid
from io import StringIO, UnsupportedOperation
import zmq
from session import extract_header
from IPython.utils import py3compat
#-----------------------------------------------------------------------------
# Globals
#-----------------------------------------------------------------------------
MASTER = 0
CHILD = 1
#-----------------------------------------------------------------------------
# Stream classes
#-----------------------------------------------------------------------------
class OutStream(object):
"""A file like object that publishes the stream to a 0MQ PUB socket."""
# The time interval between automatic flushes, in seconds.
_subprocess_flush_limit = 256
flush_interval = 0.05
topic=None
def __init__(self, session, pub_socket, name, pipe=True):
self.encoding = 'UTF-8'
self.session = session
self.pub_socket = pub_socket
self.name = name
self.parent_header = {}
self._new_buffer()
self._buffer_lock = threading.Lock()
self._master_pid = os.getpid()
self._master_thread = threading.current_thread().ident
self._pipe_pid = os.getpid()
self._pipe_flag = pipe
if pipe:
self._setup_pipe_in()
def _setup_pipe_in(self):
"""setup listening pipe for subprocesses"""
ctx = self.pub_socket.context
# use UUID to authenticate pipe messages
self._pipe_uuid = uuid.uuid4().bytes
self._pipe_in = ctx.socket(zmq.PULL)
self._pipe_in.linger = 0
self._pipe_port = self._pipe_in.bind_to_random_port("tcp://127.0.0.1")
self._pipe_poller = zmq.Poller()
self._pipe_poller.register(self._pipe_in, zmq.POLLIN)
def _setup_pipe_out(self):
# must be new context after fork
ctx = zmq.Context()
self._pipe_pid = os.getpid()
self._pipe_out = ctx.socket(zmq.PUSH)
self._pipe_out_lock = threading.Lock()
self._pipe_out.connect("tcp://127.0.0.1:%i" % self._pipe_port)
def _is_master_process(self):
return os.getpid() == self._master_pid
def _is_master_thread(self):
return threading.current_thread().ident == self._master_thread
def _have_pipe_out(self):
return os.getpid() == self._pipe_pid
def _check_mp_mode(self):
"""check for forks, and switch to zmq pipeline if necessary"""
if not self._pipe_flag or self._is_master_process():
return MASTER
else:
if not self._have_pipe_out():
self._flush_buffer()
# setup a new out pipe
self._setup_pipe_out()
return CHILD
def set_parent(self, parent):
self.parent_header = extract_header(parent)
def close(self):
self.pub_socket = None
def _flush_from_subprocesses(self):
"""flush possible pub data from subprocesses into my buffer"""
if not self._pipe_flag or not self._is_master_process():
return
for i in range(self._subprocess_flush_limit):
if self._pipe_poller.poll(0):
msg = self._pipe_in.recv_multipart()
if msg[0] != self._pipe_uuid:
continue
else:
self._buffer.write(msg[1].decode(self.encoding, 'replace'))
# this always means a flush,
# so reset our timer
self._start = 0
else:
break
def flush(self):
"""trigger actual zmq send"""
if self.pub_socket is None:
raise ValueError(u'I/O operation on closed file')
mp_mode = self._check_mp_mode()
if mp_mode != CHILD:
# we are master
if not self._is_master_thread():
# sub-threads must not trigger flush,
# but at least they can force the timer.
self._start = 0
return
self._flush_from_subprocesses()
data = self._flush_buffer()
if data:
content = {u'name':self.name, u'data':data}
msg = self.session.send(self.pub_socket, u'stream', content=content,
parent=self.parent_header, ident=self.topic)
if hasattr(self.pub_socket, 'flush'):
# socket itself has flush (presumably ZMQStream)
self.pub_socket.flush()
else:
with self._pipe_out_lock:
string = self._flush_buffer()
tracker = self._pipe_out.send_multipart([
self._pipe_uuid,
string.encode(self.encoding, 'replace'),
], copy=False, track=True)
try:
tracker.wait(1)
except:
pass
def isatty(self):
return False
def __next__(self):
raise IOError('Read not supported on a write only stream.')
if not py3compat.PY3:
next = __next__
def read(self, size=-1):
raise IOError('Read not supported on a write only stream.')
def readline(self, size=-1):
raise IOError('Read not supported on a write only stream.')
def fileno(self):
raise UnsupportedOperation("IOStream has no fileno.")
def write(self, string):
if self.pub_socket is None:
raise ValueError('I/O operation on closed file')
else:
# Make sure that we're handling unicode
if not isinstance(string, unicode):
string = string.decode(self.encoding, 'replace')
is_child = (self._check_mp_mode() == CHILD)
self._buffer.write(string)
if is_child:
# newlines imply flush in subprocesses
# mp.Pool cannot be trusted to flush promptly (or ever),
# and this helps.
if '\n' in string:
self.flush()
# do we want to check subprocess flushes on write?
# self._flush_from_subprocesses()
current_time = time.time()
if self._start < 0:
self._start = current_time
elif current_time - self._start > self.flush_interval:
self.flush()
def writelines(self, sequence):
if self.pub_socket is None:
raise ValueError('I/O operation on closed file')
else:
for string in sequence:
self.write(string)
def _flush_buffer(self):
"""clear the current buffer and return the current buffer data"""
data = u''
if self._buffer is not None:
data = self._buffer.getvalue()
self._buffer.close()
self._new_buffer()
return data
def _new_buffer(self):
self._buffer = StringIO()
self._start = -1