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# -*- coding: utf-8 -*-
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"""Manage background (threaded) jobs conveniently from an interactive shell.
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This module provides a BackgroundJobManager class. This is the main class
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meant for public usage, it implements an object which can create and manage
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new background jobs.
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It also provides the actual job classes managed by these BackgroundJobManager
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objects, see their docstrings below.
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This system was inspired by discussions with B. Granger and the
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BackgroundCommand class described in the book Python Scripting for
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Computational Science, by H. P. Langtangen:
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http://folk.uio.no/hpl/scripting
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(although ultimately no code from this text was used, as IPython's system is a
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separate implementation).
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An example notebook is provided in our documentation illustrating interactive
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use of the system.
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"""
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#*****************************************************************************
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# Copyright (C) 2005-2006 Fernando Perez <fperez@colorado.edu>
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#
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# Distributed under the terms of the BSD License. The full license is in
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# the file COPYING, distributed as part of this software.
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#*****************************************************************************
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# Code begins
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import sys
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import threading
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from IPython import get_ipython
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from IPython.core.ultratb import AutoFormattedTB
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from logging import error, debug
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class BackgroundJobManager(object):
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"""Class to manage a pool of backgrounded threaded jobs.
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Below, we assume that 'jobs' is a BackgroundJobManager instance.
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Usage summary (see the method docstrings for details):
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jobs.new(...) -> start a new job
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jobs() or jobs.status() -> print status summary of all jobs
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jobs[N] -> returns job number N.
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foo = jobs[N].result -> assign to variable foo the result of job N
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jobs[N].traceback() -> print the traceback of dead job N
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jobs.remove(N) -> remove (finished) job N
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jobs.flush() -> remove all finished jobs
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As a convenience feature, BackgroundJobManager instances provide the
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utility result and traceback methods which retrieve the corresponding
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information from the jobs list:
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jobs.result(N) <--> jobs[N].result
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jobs.traceback(N) <--> jobs[N].traceback()
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While this appears minor, it allows you to use tab completion
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interactively on the job manager instance.
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"""
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def __init__(self):
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# Lists for job management, accessed via a property to ensure they're
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# up to date.x
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self._running = []
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self._completed = []
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self._dead = []
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# A dict of all jobs, so users can easily access any of them
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self.all = {}
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# For reporting
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self._comp_report = []
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self._dead_report = []
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# Store status codes locally for fast lookups
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self._s_created = BackgroundJobBase.stat_created_c
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self._s_running = BackgroundJobBase.stat_running_c
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self._s_completed = BackgroundJobBase.stat_completed_c
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self._s_dead = BackgroundJobBase.stat_dead_c
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self._current_job_id = 0
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@property
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def running(self):
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self._update_status()
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return self._running
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@property
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def dead(self):
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self._update_status()
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return self._dead
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@property
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def completed(self):
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self._update_status()
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return self._completed
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def new(self, func_or_exp, *args, **kwargs):
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"""Add a new background job and start it in a separate thread.
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There are two types of jobs which can be created:
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1. Jobs based on expressions which can be passed to an eval() call.
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The expression must be given as a string. For example:
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job_manager.new('myfunc(x,y,z=1)'[,glob[,loc]])
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The given expression is passed to eval(), along with the optional
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global/local dicts provided. If no dicts are given, they are
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extracted automatically from the caller's frame.
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A Python statement is NOT a valid eval() expression. Basically, you
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can only use as an eval() argument something which can go on the right
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of an '=' sign and be assigned to a variable.
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For example,"print 'hello'" is not valid, but '2+3' is.
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2. Jobs given a function object, optionally passing additional
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positional arguments:
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job_manager.new(myfunc, x, y)
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The function is called with the given arguments.
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If you need to pass keyword arguments to your function, you must
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supply them as a dict named kw:
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job_manager.new(myfunc, x, y, kw=dict(z=1))
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The reason for this asymmetry is that the new() method needs to
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maintain access to its own keywords, and this prevents name collisions
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between arguments to new() and arguments to your own functions.
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In both cases, the result is stored in the job.result field of the
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background job object.
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You can set `daemon` attribute of the thread by giving the keyword
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argument `daemon`.
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Notes and caveats:
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1. All threads running share the same standard output. Thus, if your
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background jobs generate output, it will come out on top of whatever
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you are currently writing. For this reason, background jobs are best
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used with silent functions which simply return their output.
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2. Threads also all work within the same global namespace, and this
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system does not lock interactive variables. So if you send job to the
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background which operates on a mutable object for a long time, and
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start modifying that same mutable object interactively (or in another
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backgrounded job), all sorts of bizarre behaviour will occur.
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3. If a background job is spending a lot of time inside a C extension
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module which does not release the Python Global Interpreter Lock
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(GIL), this will block the IPython prompt. This is simply because the
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Python interpreter can only switch between threads at Python
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bytecodes. While the execution is inside C code, the interpreter must
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simply wait unless the extension module releases the GIL.
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4. There is no way, due to limitations in the Python threads library,
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to kill a thread once it has started."""
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if callable(func_or_exp):
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kw = kwargs.get('kw',{})
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job = BackgroundJobFunc(func_or_exp,*args,**kw)
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elif isinstance(func_or_exp, str):
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if not args:
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frame = sys._getframe(1)
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glob, loc = frame.f_globals, frame.f_locals
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elif len(args)==1:
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glob = loc = args[0]
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elif len(args)==2:
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glob,loc = args
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else:
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raise ValueError(
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'Expression jobs take at most 2 args (globals,locals)')
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job = BackgroundJobExpr(func_or_exp, glob, loc)
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else:
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raise TypeError('invalid args for new job')
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if kwargs.get('daemon', False):
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job.daemon = True
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job.num = self._current_job_id
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self._current_job_id += 1
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self.running.append(job)
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self.all[job.num] = job
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debug('Starting job # %s in a separate thread.' % job.num)
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job.start()
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return job
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def __getitem__(self, job_key):
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num = job_key if isinstance(job_key, int) else job_key.num
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return self.all[num]
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def __call__(self):
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"""An alias to self.status(),
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This allows you to simply call a job manager instance much like the
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Unix `jobs` shell command."""
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return self.status()
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def _update_status(self):
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"""Update the status of the job lists.
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This method moves finished jobs to one of two lists:
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- self.completed: jobs which completed successfully
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- self.dead: jobs which finished but died.
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It also copies those jobs to corresponding _report lists. These lists
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are used to report jobs completed/dead since the last update, and are
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then cleared by the reporting function after each call."""
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# Status codes
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srun, scomp, sdead = self._s_running, self._s_completed, self._s_dead
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# State lists, use the actual lists b/c the public names are properties
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# that call this very function on access
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running, completed, dead = self._running, self._completed, self._dead
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# Now, update all state lists
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for num, job in enumerate(running):
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stat = job.stat_code
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if stat == srun:
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continue
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elif stat == scomp:
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completed.append(job)
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self._comp_report.append(job)
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running[num] = False
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elif stat == sdead:
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dead.append(job)
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self._dead_report.append(job)
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running[num] = False
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# Remove dead/completed jobs from running list
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running[:] = filter(None, running)
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def _group_report(self,group,name):
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"""Report summary for a given job group.
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Return True if the group had any elements."""
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if group:
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print('%s jobs:' % name)
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for job in group:
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print('%s : %s' % (job.num,job))
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print()
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return True
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def _group_flush(self,group,name):
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"""Flush a given job group
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Return True if the group had any elements."""
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njobs = len(group)
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if njobs:
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plural = {1:''}.setdefault(njobs,'s')
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print('Flushing %s %s job%s.' % (njobs,name,plural))
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group[:] = []
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return True
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def _status_new(self):
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"""Print the status of newly finished jobs.
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Return True if any new jobs are reported.
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This call resets its own state every time, so it only reports jobs
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which have finished since the last time it was called."""
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self._update_status()
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new_comp = self._group_report(self._comp_report, 'Completed')
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new_dead = self._group_report(self._dead_report,
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'Dead, call jobs.traceback() for details')
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self._comp_report[:] = []
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self._dead_report[:] = []
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return new_comp or new_dead
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def status(self,verbose=0):
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"""Print a status of all jobs currently being managed."""
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self._update_status()
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self._group_report(self.running,'Running')
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self._group_report(self.completed,'Completed')
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self._group_report(self.dead,'Dead')
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# Also flush the report queues
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self._comp_report[:] = []
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self._dead_report[:] = []
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def remove(self,num):
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"""Remove a finished (completed or dead) job."""
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try:
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job = self.all[num]
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except KeyError:
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error('Job #%s not found' % num)
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else:
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stat_code = job.stat_code
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if stat_code == self._s_running:
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error('Job #%s is still running, it can not be removed.' % num)
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return
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elif stat_code == self._s_completed:
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self.completed.remove(job)
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elif stat_code == self._s_dead:
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self.dead.remove(job)
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def flush(self):
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"""Flush all finished jobs (completed and dead) from lists.
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Running jobs are never flushed.
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It first calls _status_new(), to update info. If any jobs have
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completed since the last _status_new() call, the flush operation
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aborts."""
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# Remove the finished jobs from the master dict
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alljobs = self.all
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for job in self.completed+self.dead:
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del(alljobs[job.num])
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# Now flush these lists completely
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fl_comp = self._group_flush(self.completed, 'Completed')
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fl_dead = self._group_flush(self.dead, 'Dead')
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if not (fl_comp or fl_dead):
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print('No jobs to flush.')
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def result(self,num):
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"""result(N) -> return the result of job N."""
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try:
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return self.all[num].result
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except KeyError:
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error('Job #%s not found' % num)
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def _traceback(self, job):
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num = job if isinstance(job, int) else job.num
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try:
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self.all[num].traceback()
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except KeyError:
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error('Job #%s not found' % num)
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def traceback(self, job=None):
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if job is None:
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self._update_status()
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for deadjob in self.dead:
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print("Traceback for: %r" % deadjob)
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self._traceback(deadjob)
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print()
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else:
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self._traceback(job)
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class BackgroundJobBase(threading.Thread):
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"""Base class to build BackgroundJob classes.
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The derived classes must implement:
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- Their own __init__, since the one here raises NotImplementedError. The
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derived constructor must call self._init() at the end, to provide common
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initialization.
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- A strform attribute used in calls to __str__.
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- A call() method, which will make the actual execution call and must
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return a value to be held in the 'result' field of the job object.
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"""
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# Class constants for status, in string and as numerical codes (when
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# updating jobs lists, we don't want to do string comparisons). This will
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# be done at every user prompt, so it has to be as fast as possible
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stat_created = 'Created'; stat_created_c = 0
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stat_running = 'Running'; stat_running_c = 1
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stat_completed = 'Completed'; stat_completed_c = 2
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stat_dead = 'Dead (Exception), call jobs.traceback() for details'
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stat_dead_c = -1
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def __init__(self):
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"""Must be implemented in subclasses.
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Subclasses must call :meth:`_init` for standard initialisation.
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"""
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raise NotImplementedError("This class can not be instantiated directly.")
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def _init(self):
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"""Common initialization for all BackgroundJob objects"""
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for attr in ['call','strform']:
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assert hasattr(self,attr), "Missing attribute <%s>" % attr
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# The num tag can be set by an external job manager
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self.num = None
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self.status = BackgroundJobBase.stat_created
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self.stat_code = BackgroundJobBase.stat_created_c
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self.finished = False
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self.result = '<BackgroundJob has not completed>'
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# reuse the ipython traceback handler if we can get to it, otherwise
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# make a new one
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try:
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make_tb = get_ipython().InteractiveTB.text
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except:
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make_tb = AutoFormattedTB(mode = 'Context',
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color_scheme='NoColor',
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tb_offset = 1).text
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# Note that the actual API for text() requires the three args to be
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# passed in, so we wrap it in a simple lambda.
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self._make_tb = lambda : make_tb(None, None, None)
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# Hold a formatted traceback if one is generated.
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self._tb = None
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threading.Thread.__init__(self)
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def __str__(self):
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return self.strform
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def __repr__(self):
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return '<BackgroundJob #%d: %s>' % (self.num, self.strform)
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def traceback(self):
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print(self._tb)
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def run(self):
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try:
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self.status = BackgroundJobBase.stat_running
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self.stat_code = BackgroundJobBase.stat_running_c
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self.result = self.call()
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except:
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self.status = BackgroundJobBase.stat_dead
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self.stat_code = BackgroundJobBase.stat_dead_c
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self.finished = None
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self.result = ('<BackgroundJob died, call jobs.traceback() for details>')
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self._tb = self._make_tb()
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else:
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self.status = BackgroundJobBase.stat_completed
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self.stat_code = BackgroundJobBase.stat_completed_c
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self.finished = True
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class BackgroundJobExpr(BackgroundJobBase):
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"""Evaluate an expression as a background job (uses a separate thread)."""
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def __init__(self, expression, glob=None, loc=None):
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"""Create a new job from a string which can be fed to eval().
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global/locals dicts can be provided, which will be passed to the eval
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call."""
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# fail immediately if the given expression can't be compiled
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self.code = compile(expression,'<BackgroundJob compilation>','eval')
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glob = {} if glob is None else glob
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|
loc = {} if loc is None else loc
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|
|
self.expression = self.strform = expression
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|
|
self.glob = glob
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|
|
self.loc = loc
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|
|
self._init()
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|
|
|
|
def call(self):
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|
return eval(self.code,self.glob,self.loc)
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|
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|
|
class BackgroundJobFunc(BackgroundJobBase):
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"""Run a function call as a background job (uses a separate thread)."""
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|
|
|
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def __init__(self, func, *args, **kwargs):
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|
"""Create a new job from a callable object.
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|
|
|
|
Any positional arguments and keyword args given to this constructor
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|
|
after the initial callable are passed directly to it."""
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|
|
|
|
|
if not callable(func):
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|
|
raise TypeError(
|
|
|
'first argument to BackgroundJobFunc must be callable')
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|
|
|
|
|
self.func = func
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|
|
self.args = args
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|
|
self.kwargs = kwargs
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|
|
# The string form will only include the function passed, because
|
|
|
# generating string representations of the arguments is a potentially
|
|
|
# _very_ expensive operation (e.g. with large arrays).
|
|
|
self.strform = str(func)
|
|
|
self._init()
|
|
|
|
|
|
def call(self):
|
|
|
return self.func(*self.args, **self.kwargs)
|
|
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|
