##// END OF EJS Templates
don't automatically add jobarray or queue lines to user template...
don't automatically add jobarray or queue lines to user template In parallel launchers, the queue and jobarray lines should not be added except in the default templates. user-templates must be fully specified. This prevents conflicts between PBS versions, which may not support jobarrays, etc. These lines are now only added to the *default* templates.

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phistogram.py
40 lines | 1.3 KiB | text/x-python | PythonLexer
"""Parallel histogram function"""
import numpy
from IPython.utils.pickleutil import Reference
def phistogram(view, a, bins=10, rng=None, normed=False):
"""Compute the histogram of a remote array a.
Parameters
----------
view
IPython DirectView instance
a : str
String name of the remote array
bins : int
Number of histogram bins
rng : (float, float)
Tuple of min, max of the range to histogram
normed : boolean
Should the histogram counts be normalized to 1
"""
nengines = len(view.targets)
# view.push(dict(bins=bins, rng=rng))
with view.sync_imports():
import numpy
rets = view.apply_sync(lambda a, b, rng: numpy.histogram(a,b,rng), Reference(a), bins, rng)
hists = [ r[0] for r in rets ]
lower_edges = [ r[1] for r in rets ]
# view.execute('hist, lower_edges = numpy.histogram(%s, bins, rng)' % a)
lower_edges = view.pull('lower_edges', targets=0)
hist_array = numpy.array(hists).reshape(nengines, -1)
# hist_array.shape = (nengines,-1)
total_hist = numpy.sum(hist_array, 0)
if normed:
total_hist = total_hist/numpy.sum(total_hist,dtype=float)
return total_hist, lower_edges