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relax default heartbeat period in IPython.parallel to 3s (from 1s)...
relax default heartbeat period in IPython.parallel to 3s (from 1s) Matches heartbeats elsewhere. 3s should be extremely conservative, as most heartbeat responses are O(1ms).

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util.py
476 lines | 15.2 KiB | text/x-python | PythonLexer
"""some generic utilities for dealing with classes, urls, and serialization
Authors:
* Min RK
"""
#-----------------------------------------------------------------------------
# Copyright (C) 2010-2011 The IPython Development Team
#
# Distributed under the terms of the BSD License. The full license is in
# the file COPYING, distributed as part of this software.
#-----------------------------------------------------------------------------
#-----------------------------------------------------------------------------
# Imports
#-----------------------------------------------------------------------------
# Standard library imports.
import logging
import os
import re
import stat
import socket
import sys
from signal import signal, SIGINT, SIGABRT, SIGTERM
try:
from signal import SIGKILL
except ImportError:
SIGKILL=None
try:
import cPickle
pickle = cPickle
except:
cPickle = None
import pickle
# System library imports
import zmq
from zmq.log import handlers
# IPython imports
from IPython.config.application import Application
from IPython.utils.pickleutil import can, uncan, canSequence, uncanSequence
from IPython.utils.newserialized import serialize, unserialize
from IPython.zmq.log import EnginePUBHandler
#-----------------------------------------------------------------------------
# Classes
#-----------------------------------------------------------------------------
class Namespace(dict):
"""Subclass of dict for attribute access to keys."""
def __getattr__(self, key):
"""getattr aliased to getitem"""
if key in self.iterkeys():
return self[key]
else:
raise NameError(key)
def __setattr__(self, key, value):
"""setattr aliased to setitem, with strict"""
if hasattr(dict, key):
raise KeyError("Cannot override dict keys %r"%key)
self[key] = value
class ReverseDict(dict):
"""simple double-keyed subset of dict methods."""
def __init__(self, *args, **kwargs):
dict.__init__(self, *args, **kwargs)
self._reverse = dict()
for key, value in self.iteritems():
self._reverse[value] = key
def __getitem__(self, key):
try:
return dict.__getitem__(self, key)
except KeyError:
return self._reverse[key]
def __setitem__(self, key, value):
if key in self._reverse:
raise KeyError("Can't have key %r on both sides!"%key)
dict.__setitem__(self, key, value)
self._reverse[value] = key
def pop(self, key):
value = dict.pop(self, key)
self._reverse.pop(value)
return value
def get(self, key, default=None):
try:
return self[key]
except KeyError:
return default
#-----------------------------------------------------------------------------
# Functions
#-----------------------------------------------------------------------------
def asbytes(s):
"""ensure that an object is ascii bytes"""
if isinstance(s, unicode):
s = s.encode('ascii')
return s
def is_url(url):
"""boolean check for whether a string is a zmq url"""
if '://' not in url:
return False
proto, addr = url.split('://', 1)
if proto.lower() not in ['tcp','pgm','epgm','ipc','inproc']:
return False
return True
def validate_url(url):
"""validate a url for zeromq"""
if not isinstance(url, basestring):
raise TypeError("url must be a string, not %r"%type(url))
url = url.lower()
proto_addr = url.split('://')
assert len(proto_addr) == 2, 'Invalid url: %r'%url
proto, addr = proto_addr
assert proto in ['tcp','pgm','epgm','ipc','inproc'], "Invalid protocol: %r"%proto
# domain pattern adapted from http://www.regexlib.com/REDetails.aspx?regexp_id=391
# author: Remi Sabourin
pat = re.compile(r'^([\w\d]([\w\d\-]{0,61}[\w\d])?\.)*[\w\d]([\w\d\-]{0,61}[\w\d])?$')
if proto == 'tcp':
lis = addr.split(':')
assert len(lis) == 2, 'Invalid url: %r'%url
addr,s_port = lis
try:
port = int(s_port)
except ValueError:
raise AssertionError("Invalid port %r in url: %r"%(port, url))
assert addr == '*' or pat.match(addr) is not None, 'Invalid url: %r'%url
else:
# only validate tcp urls currently
pass
return True
def validate_url_container(container):
"""validate a potentially nested collection of urls."""
if isinstance(container, basestring):
url = container
return validate_url(url)
elif isinstance(container, dict):
container = container.itervalues()
for element in container:
validate_url_container(element)
def split_url(url):
"""split a zmq url (tcp://ip:port) into ('tcp','ip','port')."""
proto_addr = url.split('://')
assert len(proto_addr) == 2, 'Invalid url: %r'%url
proto, addr = proto_addr
lis = addr.split(':')
assert len(lis) == 2, 'Invalid url: %r'%url
addr,s_port = lis
return proto,addr,s_port
def disambiguate_ip_address(ip, location=None):
"""turn multi-ip interfaces '0.0.0.0' and '*' into connectable
ones, based on the location (default interpretation of location is localhost)."""
if ip in ('0.0.0.0', '*'):
try:
external_ips = socket.gethostbyname_ex(socket.gethostname())[2]
except (socket.gaierror, IndexError):
# couldn't identify this machine, assume localhost
external_ips = []
if location is None or location in external_ips or not external_ips:
# If location is unspecified or cannot be determined, assume local
ip='127.0.0.1'
elif location:
return location
return ip
def disambiguate_url(url, location=None):
"""turn multi-ip interfaces '0.0.0.0' and '*' into connectable
ones, based on the location (default interpretation is localhost).
This is for zeromq urls, such as tcp://*:10101."""
try:
proto,ip,port = split_url(url)
except AssertionError:
# probably not tcp url; could be ipc, etc.
return url
ip = disambiguate_ip_address(ip,location)
return "%s://%s:%s"%(proto,ip,port)
def serialize_object(obj, threshold=64e-6):
"""Serialize an object into a list of sendable buffers.
Parameters
----------
obj : object
The object to be serialized
threshold : float
The threshold for not double-pickling the content.
Returns
-------
('pmd', [bufs]) :
where pmd is the pickled metadata wrapper,
bufs is a list of data buffers
"""
databuffers = []
if isinstance(obj, (list, tuple)):
clist = canSequence(obj)
slist = map(serialize, clist)
for s in slist:
if s.typeDescriptor in ('buffer', 'ndarray') or s.getDataSize() > threshold:
databuffers.append(s.getData())
s.data = None
return pickle.dumps(slist,-1), databuffers
elif isinstance(obj, dict):
sobj = {}
for k in sorted(obj.iterkeys()):
s = serialize(can(obj[k]))
if s.typeDescriptor in ('buffer', 'ndarray') or s.getDataSize() > threshold:
databuffers.append(s.getData())
s.data = None
sobj[k] = s
return pickle.dumps(sobj,-1),databuffers
else:
s = serialize(can(obj))
if s.typeDescriptor in ('buffer', 'ndarray') or s.getDataSize() > threshold:
databuffers.append(s.getData())
s.data = None
return pickle.dumps(s,-1),databuffers
def unserialize_object(bufs):
"""reconstruct an object serialized by serialize_object from data buffers."""
bufs = list(bufs)
sobj = pickle.loads(bufs.pop(0))
if isinstance(sobj, (list, tuple)):
for s in sobj:
if s.data is None:
s.data = bufs.pop(0)
return uncanSequence(map(unserialize, sobj)), bufs
elif isinstance(sobj, dict):
newobj = {}
for k in sorted(sobj.iterkeys()):
s = sobj[k]
if s.data is None:
s.data = bufs.pop(0)
newobj[k] = uncan(unserialize(s))
return newobj, bufs
else:
if sobj.data is None:
sobj.data = bufs.pop(0)
return uncan(unserialize(sobj)), bufs
def pack_apply_message(f, args, kwargs, threshold=64e-6):
"""pack up a function, args, and kwargs to be sent over the wire
as a series of buffers. Any object whose data is larger than `threshold`
will not have their data copied (currently only numpy arrays support zero-copy)"""
msg = [pickle.dumps(can(f),-1)]
databuffers = [] # for large objects
sargs, bufs = serialize_object(args,threshold)
msg.append(sargs)
databuffers.extend(bufs)
skwargs, bufs = serialize_object(kwargs,threshold)
msg.append(skwargs)
databuffers.extend(bufs)
msg.extend(databuffers)
return msg
def unpack_apply_message(bufs, g=None, copy=True):
"""unpack f,args,kwargs from buffers packed by pack_apply_message()
Returns: original f,args,kwargs"""
bufs = list(bufs) # allow us to pop
assert len(bufs) >= 3, "not enough buffers!"
if not copy:
for i in range(3):
bufs[i] = bufs[i].bytes
cf = pickle.loads(bufs.pop(0))
sargs = list(pickle.loads(bufs.pop(0)))
skwargs = dict(pickle.loads(bufs.pop(0)))
# print sargs, skwargs
f = uncan(cf, g)
for sa in sargs:
if sa.data is None:
m = bufs.pop(0)
if sa.getTypeDescriptor() in ('buffer', 'ndarray'):
# always use a buffer, until memoryviews get sorted out
sa.data = buffer(m)
# disable memoryview support
# if copy:
# sa.data = buffer(m)
# else:
# sa.data = m.buffer
else:
if copy:
sa.data = m
else:
sa.data = m.bytes
args = uncanSequence(map(unserialize, sargs), g)
kwargs = {}
for k in sorted(skwargs.iterkeys()):
sa = skwargs[k]
if sa.data is None:
m = bufs.pop(0)
if sa.getTypeDescriptor() in ('buffer', 'ndarray'):
# always use a buffer, until memoryviews get sorted out
sa.data = buffer(m)
# disable memoryview support
# if copy:
# sa.data = buffer(m)
# else:
# sa.data = m.buffer
else:
if copy:
sa.data = m
else:
sa.data = m.bytes
kwargs[k] = uncan(unserialize(sa), g)
return f,args,kwargs
#--------------------------------------------------------------------------
# helpers for implementing old MEC API via view.apply
#--------------------------------------------------------------------------
def interactive(f):
"""decorator for making functions appear as interactively defined.
This results in the function being linked to the user_ns as globals()
instead of the module globals().
"""
f.__module__ = '__main__'
return f
@interactive
def _push(ns):
"""helper method for implementing `client.push` via `client.apply`"""
globals().update(ns)
@interactive
def _pull(keys):
"""helper method for implementing `client.pull` via `client.apply`"""
user_ns = globals()
if isinstance(keys, (list,tuple, set)):
for key in keys:
if not user_ns.has_key(key):
raise NameError("name '%s' is not defined"%key)
return map(user_ns.get, keys)
else:
if not user_ns.has_key(keys):
raise NameError("name '%s' is not defined"%keys)
return user_ns.get(keys)
@interactive
def _execute(code):
"""helper method for implementing `client.execute` via `client.apply`"""
exec code in globals()
#--------------------------------------------------------------------------
# extra process management utilities
#--------------------------------------------------------------------------
_random_ports = set()
def select_random_ports(n):
"""Selects and return n random ports that are available."""
ports = []
for i in xrange(n):
sock = socket.socket()
sock.bind(('', 0))
while sock.getsockname()[1] in _random_ports:
sock.close()
sock = socket.socket()
sock.bind(('', 0))
ports.append(sock)
for i, sock in enumerate(ports):
port = sock.getsockname()[1]
sock.close()
ports[i] = port
_random_ports.add(port)
return ports
def signal_children(children):
"""Relay interupt/term signals to children, for more solid process cleanup."""
def terminate_children(sig, frame):
log = Application.instance().log
log.critical("Got signal %i, terminating children..."%sig)
for child in children:
child.terminate()
sys.exit(sig != SIGINT)
# sys.exit(sig)
for sig in (SIGINT, SIGABRT, SIGTERM):
signal(sig, terminate_children)
def generate_exec_key(keyfile):
import uuid
newkey = str(uuid.uuid4())
with open(keyfile, 'w') as f:
# f.write('ipython-key ')
f.write(newkey+'\n')
# set user-only RW permissions (0600)
# this will have no effect on Windows
os.chmod(keyfile, stat.S_IRUSR|stat.S_IWUSR)
def integer_loglevel(loglevel):
try:
loglevel = int(loglevel)
except ValueError:
if isinstance(loglevel, str):
loglevel = getattr(logging, loglevel)
return loglevel
def connect_logger(logname, context, iface, root="ip", loglevel=logging.DEBUG):
logger = logging.getLogger(logname)
if any([isinstance(h, handlers.PUBHandler) for h in logger.handlers]):
# don't add a second PUBHandler
return
loglevel = integer_loglevel(loglevel)
lsock = context.socket(zmq.PUB)
lsock.connect(iface)
handler = handlers.PUBHandler(lsock)
handler.setLevel(loglevel)
handler.root_topic = root
logger.addHandler(handler)
logger.setLevel(loglevel)
def connect_engine_logger(context, iface, engine, loglevel=logging.DEBUG):
logger = logging.getLogger()
if any([isinstance(h, handlers.PUBHandler) for h in logger.handlers]):
# don't add a second PUBHandler
return
loglevel = integer_loglevel(loglevel)
lsock = context.socket(zmq.PUB)
lsock.connect(iface)
handler = EnginePUBHandler(engine, lsock)
handler.setLevel(loglevel)
logger.addHandler(handler)
logger.setLevel(loglevel)
return logger
def local_logger(logname, loglevel=logging.DEBUG):
loglevel = integer_loglevel(loglevel)
logger = logging.getLogger(logname)
if any([isinstance(h, logging.StreamHandler) for h in logger.handlers]):
# don't add a second StreamHandler
return
handler = logging.StreamHandler()
handler.setLevel(loglevel)
formatter = logging.Formatter("%(asctime)s.%(msecs).03d [%(name)s] %(message)s",
datefmt="%Y-%m-%d %H:%M:%S")
handler.setFormatter(formatter)
logger.addHandler(handler)
logger.setLevel(loglevel)
return logger