|
|
.. _parallel_messages:
|
|
|
|
|
|
Messaging for Parallel Computing
|
|
|
================================
|
|
|
|
|
|
This is an extension of the :ref:`messaging <messaging>` doc. Diagrams of the connections
|
|
|
can be found in the :ref:`parallel connections <parallel_connections>` doc.
|
|
|
|
|
|
|
|
|
ZMQ messaging is also used in the parallel computing IPython system. All messages to/from
|
|
|
kernels remain the same as the single kernel model, and are forwarded through a ZMQ Queue
|
|
|
device. The controller receives all messages and replies in these channels, and saves
|
|
|
results for future use.
|
|
|
|
|
|
The Controller
|
|
|
--------------
|
|
|
|
|
|
The controller is the central collection of processes in the IPython parallel computing
|
|
|
model. It has two major components:
|
|
|
|
|
|
* The Hub
|
|
|
* A collection of Schedulers
|
|
|
|
|
|
The Hub
|
|
|
-------
|
|
|
|
|
|
The Hub is the central process for monitoring the state of the engines, and all task
|
|
|
requests and results. It has no role in execution and does no relay of messages, so
|
|
|
large blocking requests or database actions in the Hub do not have the ability to impede
|
|
|
job submission and results.
|
|
|
|
|
|
Registration (``ROUTER``)
|
|
|
*************************
|
|
|
|
|
|
The first function of the Hub is to facilitate and monitor connections of clients
|
|
|
and engines. Both client and engine registration are handled by the same socket, so only
|
|
|
one ip/port pair is needed to connect any number of connections and clients.
|
|
|
|
|
|
Engines register with the ``zmq.IDENTITY`` of their two ``DEALER`` sockets, one for the
|
|
|
queue, which receives execute requests, and one for the heartbeat, which is used to
|
|
|
monitor the survival of the Engine process.
|
|
|
|
|
|
Message type: ``registration_request``::
|
|
|
|
|
|
content = {
|
|
|
'uuid' : 'abcd-1234-...', # the zmq.IDENTITY of the engine's sockets
|
|
|
}
|
|
|
|
|
|
.. note::
|
|
|
|
|
|
these are always the same, at least for now.
|
|
|
|
|
|
The Controller replies to an Engine's registration request with the engine's integer ID,
|
|
|
and all the remaining connection information for connecting the heartbeat process, and
|
|
|
kernel queue socket(s). The message status will be an error if the Engine requests IDs that
|
|
|
already in use.
|
|
|
|
|
|
Message type: ``registration_reply``::
|
|
|
|
|
|
content = {
|
|
|
'status' : 'ok', # or 'error'
|
|
|
# if ok:
|
|
|
'id' : 0, # int, the engine id
|
|
|
}
|
|
|
|
|
|
Clients use the same socket as engines to start their connections. Connection requests
|
|
|
from clients need no information:
|
|
|
|
|
|
Message type: ``connection_request``::
|
|
|
|
|
|
content = {}
|
|
|
|
|
|
The reply to a Client registration request contains the connection information for the
|
|
|
multiplexer and load balanced queues, as well as the address for direct hub
|
|
|
queries. If any of these addresses is `None`, that functionality is not available.
|
|
|
|
|
|
Message type: ``connection_reply``::
|
|
|
|
|
|
content = {
|
|
|
'status' : 'ok', # or 'error'
|
|
|
}
|
|
|
|
|
|
Heartbeat
|
|
|
*********
|
|
|
|
|
|
The hub uses a heartbeat system to monitor engines, and track when they become
|
|
|
unresponsive. As described in :ref:`messaging <messaging>`, and shown in :ref:`connections
|
|
|
<parallel_connections>`.
|
|
|
|
|
|
Notification (``PUB``)
|
|
|
**********************
|
|
|
|
|
|
The hub publishes all engine registration/unregistration events on a ``PUB`` socket.
|
|
|
This allows clients to have up-to-date engine ID sets without polling. Registration
|
|
|
notifications contain both the integer engine ID and the queue ID, which is necessary for
|
|
|
sending messages via the Multiplexer Queue and Control Queues.
|
|
|
|
|
|
Message type: ``registration_notification``::
|
|
|
|
|
|
content = {
|
|
|
'id' : 0, # engine ID that has been registered
|
|
|
'uuid' : 'engine_id' # the IDENT for the engine's sockets
|
|
|
}
|
|
|
|
|
|
Message type : ``unregistration_notification``::
|
|
|
|
|
|
content = {
|
|
|
'id' : 0 # engine ID that has been unregistered
|
|
|
'uuid' : 'engine_id' # the IDENT for the engine's sockets
|
|
|
}
|
|
|
|
|
|
|
|
|
Client Queries (``ROUTER``)
|
|
|
***************************
|
|
|
|
|
|
The hub monitors and logs all queue traffic, so that clients can retrieve past
|
|
|
results or monitor pending tasks. This information may reside in-memory on the Hub, or
|
|
|
on disk in a database (SQLite and MongoDB are currently supported). These requests are
|
|
|
handled by the same socket as registration.
|
|
|
|
|
|
|
|
|
:func:`queue_request` requests can specify multiple engines to query via the `targets`
|
|
|
element. A verbose flag can be passed, to determine whether the result should be the list
|
|
|
of `msg_ids` in the queue or simply the length of each list.
|
|
|
|
|
|
Message type: ``queue_request``::
|
|
|
|
|
|
content = {
|
|
|
'verbose' : True, # whether return should be lists themselves or just lens
|
|
|
'targets' : [0,3,1] # list of ints
|
|
|
}
|
|
|
|
|
|
The content of a reply to a :func:`queue_request` request is a dict, keyed by the engine
|
|
|
IDs. Note that they will be the string representation of the integer keys, since JSON
|
|
|
cannot handle number keys. The three keys of each dict are::
|
|
|
|
|
|
'completed' : messages submitted via any queue that ran on the engine
|
|
|
'queue' : jobs submitted via MUX queue, whose results have not been received
|
|
|
'tasks' : tasks that are known to have been submitted to the engine, but
|
|
|
have not completed. Note that with the pure zmq scheduler, this will
|
|
|
always be 0/[].
|
|
|
|
|
|
Message type: ``queue_reply``::
|
|
|
|
|
|
content = {
|
|
|
'status' : 'ok', # or 'error'
|
|
|
# if verbose=False:
|
|
|
'0' : {'completed' : 1, 'queue' : 7, 'tasks' : 0},
|
|
|
# if verbose=True:
|
|
|
'1' : {'completed' : ['abcd-...','1234-...'], 'queue' : ['58008-'], 'tasks' : []},
|
|
|
}
|
|
|
|
|
|
Clients can request individual results directly from the hub. This is primarily for
|
|
|
gathering results of executions not submitted by the requesting client, as the client
|
|
|
will have all its own results already. Requests are made by msg_id, and can contain one or
|
|
|
more msg_id. An additional boolean key 'statusonly' can be used to not request the
|
|
|
results, but simply poll the status of the jobs.
|
|
|
|
|
|
Message type: ``result_request``::
|
|
|
|
|
|
content = {
|
|
|
'msg_ids' : ['uuid','...'], # list of strs
|
|
|
'targets' : [1,2,3], # list of int ids or uuids
|
|
|
'statusonly' : False, # bool
|
|
|
}
|
|
|
|
|
|
The :func:`result_request` reply contains the content objects of the actual execution
|
|
|
reply messages. If `statusonly=True`, then there will be only the 'pending' and
|
|
|
'completed' lists.
|
|
|
|
|
|
|
|
|
Message type: ``result_reply``::
|
|
|
|
|
|
content = {
|
|
|
'status' : 'ok', # else error
|
|
|
# if ok:
|
|
|
'acbd-...' : msg, # the content dict is keyed by msg_ids,
|
|
|
# values are the result messages
|
|
|
# there will be none of these if `statusonly=True`
|
|
|
'pending' : ['msg_id','...'], # msg_ids still pending
|
|
|
'completed' : ['msg_id','...'], # list of completed msg_ids
|
|
|
}
|
|
|
buffers = ['bufs','...'] # the buffers that contained the results of the objects.
|
|
|
# this will be empty if no messages are complete, or if
|
|
|
# statusonly is True.
|
|
|
|
|
|
For memory management purposes, Clients can also instruct the hub to forget the
|
|
|
results of messages. This can be done by message ID or engine ID. Individual messages are
|
|
|
dropped by msg_id, and all messages completed on an engine are dropped by engine ID. This
|
|
|
may no longer be necessary with the mongodb-based message logging backend.
|
|
|
|
|
|
If the msg_ids element is the string ``'all'`` instead of a list, then all completed
|
|
|
results are forgotten.
|
|
|
|
|
|
Message type: ``purge_request``::
|
|
|
|
|
|
content = {
|
|
|
'msg_ids' : ['id1', 'id2',...], # list of msg_ids or 'all'
|
|
|
'engine_ids' : [0,2,4] # list of engine IDs
|
|
|
}
|
|
|
|
|
|
The reply to a purge request is simply the status 'ok' if the request succeeded, or an
|
|
|
explanation of why it failed, such as requesting the purge of a nonexistent or pending
|
|
|
message.
|
|
|
|
|
|
Message type: ``purge_reply``::
|
|
|
|
|
|
content = {
|
|
|
'status' : 'ok', # or 'error'
|
|
|
}
|
|
|
|
|
|
|
|
|
Schedulers
|
|
|
----------
|
|
|
|
|
|
There are three basic schedulers:
|
|
|
|
|
|
* Task Scheduler
|
|
|
* MUX Scheduler
|
|
|
* Control Scheduler
|
|
|
|
|
|
The MUX and Control schedulers are simple MonitoredQueue ØMQ devices, with ``ROUTER``
|
|
|
sockets on either side. This allows the queue to relay individual messages to particular
|
|
|
targets via ``zmq.IDENTITY`` routing. The Task scheduler may be a MonitoredQueue ØMQ
|
|
|
device, in which case the client-facing socket is ``ROUTER``, and the engine-facing socket
|
|
|
is ``DEALER``. The result of this is that client-submitted messages are load-balanced via
|
|
|
the ``DEALER`` socket, but the engine's replies to each message go to the requesting client.
|
|
|
|
|
|
Raw ``DEALER`` scheduling is quite primitive, and doesn't allow message introspection, so
|
|
|
there are also Python Schedulers that can be used. These Schedulers behave in much the
|
|
|
same way as a MonitoredQueue does from the outside, but have rich internal logic to
|
|
|
determine destinations, as well as handle dependency graphs Their sockets are always
|
|
|
``ROUTER`` on both sides.
|
|
|
|
|
|
The Python task schedulers have an additional message type, which informs the Hub of
|
|
|
the destination of a task as soon as that destination is known.
|
|
|
|
|
|
Message type: ``task_destination``::
|
|
|
|
|
|
content = {
|
|
|
'msg_id' : 'abcd-1234-...', # the msg's uuid
|
|
|
'engine_id' : '1234-abcd-...', # the destination engine's zmq.IDENTITY
|
|
|
}
|
|
|
|
|
|
:func:`apply`
|
|
|
*************
|
|
|
|
|
|
In terms of message classes, the MUX scheduler and Task scheduler relay the exact same
|
|
|
message types. Their only difference lies in how the destination is selected.
|
|
|
|
|
|
The `Namespace <http://gist.github.com/483294>`_ model suggests that execution be able to
|
|
|
use the model::
|
|
|
|
|
|
ns.apply(f, *args, **kwargs)
|
|
|
|
|
|
which takes `f`, a function in the user's namespace, and executes ``f(*args, **kwargs)``
|
|
|
on a remote engine, returning the result (or, for non-blocking, information facilitating
|
|
|
later retrieval of the result). This model, unlike the execute message which just uses a
|
|
|
code string, must be able to send arbitrary (pickleable) Python objects. And ideally, copy
|
|
|
as little data as we can. The `buffers` property of a Message was introduced for this
|
|
|
purpose.
|
|
|
|
|
|
Utility method :func:`build_apply_message` in :mod:`IPython.zmq.serialize` wraps a
|
|
|
function signature and builds a sendable buffer format for minimal data copying (exactly
|
|
|
zero copies of numpy array data or buffers or large strings).
|
|
|
|
|
|
Message type: ``apply_request``::
|
|
|
|
|
|
metadata = {
|
|
|
'after' : ['msg_id',...], # list of msg_ids or output of Dependency.as_dict()
|
|
|
'follow' : ['msg_id',...], # list of msg_ids or output of Dependency.as_dict()
|
|
|
}
|
|
|
content = {}
|
|
|
buffers = ['...'] # at least 3 in length
|
|
|
# as built by build_apply_message(f,args,kwargs)
|
|
|
|
|
|
after/follow represent task dependencies. 'after' corresponds to a time dependency. The
|
|
|
request will not arrive at an engine until the 'after' dependency tasks have completed.
|
|
|
'follow' corresponds to a location dependency. The task will be submitted to the same
|
|
|
engine as these msg_ids (see :class:`Dependency` docs for details).
|
|
|
|
|
|
Message type: ``apply_reply``::
|
|
|
|
|
|
content = {
|
|
|
'status' : 'ok' # 'ok' or 'error'
|
|
|
# other error info here, as in other messages
|
|
|
}
|
|
|
buffers = ['...'] # either 1 or 2 in length
|
|
|
# a serialization of the return value of f(*args,**kwargs)
|
|
|
# only populated if status is 'ok'
|
|
|
|
|
|
All engine execution and data movement is performed via apply messages.
|
|
|
|
|
|
Control Messages
|
|
|
----------------
|
|
|
|
|
|
Messages that interact with the engines, but are not meant to execute code, are submitted
|
|
|
via the Control queue. These messages have high priority, and are thus received and
|
|
|
handled before any execution requests.
|
|
|
|
|
|
Clients may want to clear the namespace on the engine. There are no arguments nor
|
|
|
information involved in this request, so the content is empty.
|
|
|
|
|
|
Message type: ``clear_request``::
|
|
|
|
|
|
content = {}
|
|
|
|
|
|
Message type: ``clear_reply``::
|
|
|
|
|
|
content = {
|
|
|
'status' : 'ok' # 'ok' or 'error'
|
|
|
# other error info here, as in other messages
|
|
|
}
|
|
|
|
|
|
Clients may want to abort tasks that have not yet run. This can by done by message id, or
|
|
|
all enqueued messages can be aborted if None is specified.
|
|
|
|
|
|
Message type: ``abort_request``::
|
|
|
|
|
|
content = {
|
|
|
'msg_ids' : ['1234-...', '...'] # list of msg_ids or None
|
|
|
}
|
|
|
|
|
|
Message type: ``abort_reply``::
|
|
|
|
|
|
content = {
|
|
|
'status' : 'ok' # 'ok' or 'error'
|
|
|
# other error info here, as in other messages
|
|
|
}
|
|
|
|
|
|
The last action a client may want to do is shutdown the kernel. If a kernel receives a
|
|
|
shutdown request, then it aborts all queued messages, replies to the request, and exits.
|
|
|
|
|
|
Message type: ``shutdown_request``::
|
|
|
|
|
|
content = {}
|
|
|
|
|
|
Message type: ``shutdown_reply``::
|
|
|
|
|
|
content = {
|
|
|
'status' : 'ok' # 'ok' or 'error'
|
|
|
# other error info here, as in other messages
|
|
|
}
|
|
|
|
|
|
|
|
|
Implementation
|
|
|
--------------
|
|
|
|
|
|
There are a few differences in implementation between the `StreamSession` object used in
|
|
|
the newparallel branch and the `Session` object, the main one being that messages are
|
|
|
sent in parts, rather than as a single serialized object. `StreamSession` objects also
|
|
|
take pack/unpack functions, which are to be used when serializing/deserializing objects.
|
|
|
These can be any functions that translate to/from formats that ZMQ sockets can send
|
|
|
(buffers,bytes, etc.).
|
|
|
|
|
|
Split Sends
|
|
|
***********
|
|
|
|
|
|
Previously, messages were bundled as a single json object and one call to
|
|
|
:func:`socket.send_json`. Since the hub inspects all messages, and doesn't need to
|
|
|
see the content of the messages, which can be large, messages are now serialized and sent in
|
|
|
pieces. All messages are sent in at least 4 parts: the header, the parent header, the metadata and the content.
|
|
|
This allows the controller to unpack and inspect the (always small) header,
|
|
|
without spending time unpacking the content unless the message is bound for the
|
|
|
controller. Buffers are added on to the end of the message, and can be any objects that
|
|
|
present the buffer interface.
|
|
|
|
|
|
|