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Add core copy detection algorithm...
Add core copy detection algorithm This adds findcopies, which detects merge-relevant copies between files in a pair of manifests back to the merge ancestor. While the merge code invokes the copy detection routine, it does not yet use the result.

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mpatch.c
411 lines | 8.4 KiB | text/x-c | CLexer
mpm@selenic.com
Add an O(m + nlog n) patching extension
r72 /*
mpatch.c - efficient binary patching for Mercurial
This implements a patch algorithm that's O(m + nlog n) where m is the
size of the output and n is the number of patches.
Given a list of binary patches, it unpacks each into a hunk list,
then combines the hunk lists with a treewise recursion to form a
single hunk list. This hunk list is then applied to the original
text.
The text (or binary) fragments are copied directly from their source
Python objects into a preallocated output string to avoid the
allocation of intermediate Python objects. Working memory is about 2x
the total number of hunks.
Vadim Gelfer
update copyrights.
r2859 Copyright 2005, 2006 Matt Mackall <mpm@selenic.com>
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r72
This software may be used and distributed according to the terms
of the GNU General Public License, incorporated herein by reference.
*/
#include <Python.h>
#include <stdlib.h>
#include <string.h>
Vadim Gelfer
mac os x: fixes for 10.2 from chris monson <monpublic@gmail.com>
r2468
mpm@selenic.com
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r410 #ifdef _WIN32
Vadim Gelfer
mac os x: fixes for 10.2 from chris monson <monpublic@gmail.com>
r2468 # ifdef _MSC_VER
/* msvc 6.0 has problems */
# define inline __inline
mpm@selenic.com
[PATCH] bdiff/mpatch under MSVC...
r551 typedef unsigned long uint32_t;
Vadim Gelfer
mac os x: fixes for 10.2 from chris monson <monpublic@gmail.com>
r2468 # else
# include <stdint.h>
# endif
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r411 static uint32_t ntohl(uint32_t x)
{
return ((x & 0x000000ffUL) << 24) |
((x & 0x0000ff00UL) << 8) |
((x & 0x00ff0000UL) >> 8) |
((x & 0xff000000UL) >> 24);
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r410 }
#else
Vadim Gelfer
mac os x: fixes for 10.2 from chris monson <monpublic@gmail.com>
r2468 /* not windows */
# include <sys/types.h>
# include <arpa/inet.h>
Thomas Arendsen Hein
Include inttypes.h instead of stdint.h (fixes issue299)...
r2543 # include <inttypes.h>
mpm@selenic.com
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r410 #endif
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static char mpatch_doc[] = "Efficient binary patching.";
Benoit Boissinot
catch errors and throw exception with invalid binary patch data
r1722 static PyObject *mpatch_Error;
mpm@selenic.com
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r72
struct frag {
int start, end, len;
char *data;
};
struct flist {
struct frag *base, *head, *tail;
};
static struct flist *lalloc(int size)
{
mpm@selenic.com
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r128 struct flist *a = NULL;
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r72
Matt Mackall
mpatch: Fix for malloc corner case on AIX
r3138 if (size < 1)
size = 1;
TK Soh
do proper typecasting on malloc() and calloc() calls...
r1978 a = (struct flist *)malloc(sizeof(struct flist));
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r128 if (a) {
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r1978 a->base = (struct frag *)malloc(sizeof(struct frag) * size);
Thomas Arendsen Hein
Set correct exception for another possible malloc error in mpatch.c
r2048 if (a->base) {
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r128 a->head = a->tail = a->base;
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r2048 return a;
}
free(a);
a = NULL;
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r128 }
Benoit Boissinot
catch errors and throw exception with invalid binary patch data
r1722 if (!PyErr_Occurred())
PyErr_NoMemory();
return NULL;
mpm@selenic.com
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r72 }
static void lfree(struct flist *a)
{
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r128 if (a) {
free(a->base);
free(a);
}
mpm@selenic.com
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r72 }
static int lsize(struct flist *a)
{
return a->tail - a->head;
}
/* move hunks in source that are less cut to dest, compensating
for changes in offset. the last hunk may be split if necessary.
*/
static int gather(struct flist *dest, struct flist *src, int cut, int offset)
{
struct frag *d = dest->tail, *s = src->head;
int postend, c, l;
while (s != src->tail) {
if (s->start + offset >= cut)
mpm@selenic.com
Gotos are embarrassing.
r82 break; /* we've gone far enough */
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postend = offset + s->start + s->len;
if (postend <= cut) {
/* save this hunk */
offset += s->start + s->len - s->end;
*d++ = *s++;
}
else {
/* break up this hunk */
c = cut - offset;
if (s->end < c)
c = s->end;
l = cut - offset - s->start;
if (s->len < l)
l = s->len;
offset += s->start + l - c;
d->start = s->start;
d->end = c;
d->len = l;
d->data = s->data;
d++;
s->start = c;
s->len = s->len - l;
s->data = s->data + l;
mpm@selenic.com
Gotos are embarrassing.
r82 break;
mpm@selenic.com
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r72 }
}
dest->tail = d;
src->head = s;
return offset;
}
/* like gather, but with no output list */
static int discard(struct flist *src, int cut, int offset)
{
struct frag *s = src->head;
int postend, c, l;
while (s != src->tail) {
if (s->start + offset >= cut)
mpm@selenic.com
Gotos are embarrassing.
r82 break;
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r72
postend = offset + s->start + s->len;
if (postend <= cut) {
offset += s->start + s->len - s->end;
s++;
}
else {
c = cut - offset;
if (s->end < c)
c = s->end;
l = cut - offset - s->start;
if (s->len < l)
l = s->len;
offset += s->start + l - c;
s->start = c;
s->len = s->len - l;
s->data = s->data + l;
mpm@selenic.com
Gotos are embarrassing.
r82 break;
mpm@selenic.com
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r72 }
}
src->head = s;
return offset;
}
/* combine hunk lists a and b, while adjusting b for offset changes in a/
this deletes a and b and returns the resultant list. */
static struct flist *combine(struct flist *a, struct flist *b)
{
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r128 struct flist *c = NULL;
struct frag *bh, *ct;
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r72 int offset = 0, post;
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r128 if (a && b)
c = lalloc((lsize(a) + lsize(b)) * 2);
if (c) {
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r72
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r128 for (bh = b->head; bh != b->tail; bh++) {
/* save old hunks */
offset = gather(c, a, bh->start, offset);
mpm@selenic.com
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r72
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r128 /* discard replaced hunks */
post = discard(a, bh->end, offset);
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r72
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r128 /* insert new hunk */
ct = c->tail;
ct->start = bh->start - offset;
ct->end = bh->end - post;
ct->len = bh->len;
ct->data = bh->data;
c->tail++;
offset = post;
}
/* hold on to tail from a */
memcpy(c->tail, a->head, sizeof(struct frag) * lsize(a));
c->tail += lsize(a);
mpm@selenic.com
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r72 }
lfree(a);
lfree(b);
return c;
}
/* decode a binary patch into a hunk list */
static struct flist *decode(char *bin, int len)
{
struct flist *l;
struct frag *lt;
char *end = bin + len;
mpm@selenic.com
mpatch: attempt to handle unpack alignment issues on Solaris...
r384 char decode[12]; /* for dealing with alignment issues */
mpm@selenic.com
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r72
/* assume worst case size, we won't have many of these lists */
l = lalloc(len / 12);
Benoit Boissinot
catch errors and throw exception with invalid binary patch data
r1722 if (!l)
return NULL;
mpm@selenic.com
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r72 lt = l->tail;
while (bin < end) {
mpm@selenic.com
mpatch: attempt to handle unpack alignment issues on Solaris...
r384 memcpy(decode, bin, 12);
lt->start = ntohl(*(uint32_t *)decode);
lt->end = ntohl(*(uint32_t *)(decode + 4));
lt->len = ntohl(*(uint32_t *)(decode + 8));
mpm@selenic.com
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r72 lt->data = bin + 12;
bin += 12 + lt->len;
lt++;
}
Benoit Boissinot
catch errors and throw exception with invalid binary patch data
r1722 if (bin != end) {
if (!PyErr_Occurred())
PyErr_SetString(mpatch_Error, "patch cannot be decoded");
lfree(l);
return NULL;
}
mpm@selenic.com
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r72 l->tail = lt;
return l;
}
/* calculate the size of resultant text */
static int calcsize(int len, struct flist *l)
{
int outlen = 0, last = 0;
struct frag *f = l->head;
while (f != l->tail) {
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catch errors and throw exception with invalid binary patch data
r1722 if (f->start < last || f->end > len) {
if (!PyErr_Occurred())
PyErr_SetString(mpatch_Error,
"invalid patch");
return -1;
}
mpm@selenic.com
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r72 outlen += f->start - last;
last = f->end;
outlen += f->len;
f++;
}
outlen += len - last;
return outlen;
}
Benoit Boissinot
catch errors and throw exception with invalid binary patch data
r1722 static int apply(char *buf, char *orig, int len, struct flist *l)
mpm@selenic.com
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r72 {
struct frag *f = l->head;
int last = 0;
char *p = buf;
while (f != l->tail) {
Benoit Boissinot
catch errors and throw exception with invalid binary patch data
r1722 if (f->start < last || f->end > len) {
if (!PyErr_Occurred())
PyErr_SetString(mpatch_Error,
"invalid patch");
return 0;
}
mpm@selenic.com
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r72 memcpy(p, orig + last, f->start - last);
p += f->start - last;
memcpy(p, f->data, f->len);
last = f->end;
p += f->len;
f++;
}
memcpy(p, orig + last, len - last);
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catch errors and throw exception with invalid binary patch data
r1722 return 1;
mpm@selenic.com
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r72 }
/* recursively generate a patch of all bins between start and end */
static struct flist *fold(PyObject *bins, int start, int end)
{
int len;
if (start + 1 == end) {
/* trivial case, output a decoded list */
PyObject *tmp = PyList_GetItem(bins, start);
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r128 if (!tmp)
return NULL;
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r72 return decode(PyString_AsString(tmp), PyString_Size(tmp));
}
/* divide and conquer, memory management is elsewhere */
len = (end - start) / 2;
return combine(fold(bins, start, start + len),
fold(bins, start + len, end));
}
static PyObject *
patches(PyObject *self, PyObject *args)
{
PyObject *text, *bins, *result;
struct flist *patch;
char *in, *out;
int len, outlen;
mpm@selenic.com
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r128 if (!PyArg_ParseTuple(args, "SO:mpatch", &text, &bins))
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Add an O(m + nlog n) patching extension
r72 return NULL;
len = PyList_Size(bins);
if (!len) {
/* nothing to do */
Py_INCREF(text);
return text;
}
patch = fold(bins, 0, len);
mpm@selenic.com
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r128 if (!patch)
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catch errors and throw exception with invalid binary patch data
r1722 return NULL;
mpm@selenic.com
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r128
mpm@selenic.com
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r72 outlen = calcsize(PyString_Size(text), patch);
Benoit Boissinot
catch errors and throw exception with invalid binary patch data
r1722 if (outlen < 0) {
result = NULL;
goto cleanup;
}
mpm@selenic.com
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r72 result = PyString_FromStringAndSize(NULL, outlen);
Benoit Boissinot
catch errors and throw exception with invalid binary patch data
r1722 if (!result) {
result = NULL;
goto cleanup;
mpm@selenic.com
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r128 }
Benoit Boissinot
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r1722 in = PyString_AsString(text);
out = PyString_AsString(result);
if (!apply(out, in, PyString_Size(text), patch)) {
Py_DECREF(result);
result = NULL;
}
cleanup:
mpm@selenic.com
Add an O(m + nlog n) patching extension
r72 lfree(patch);
return result;
}
mason@suse.com
Fill in the uncompressed size during revlog.addgroup...
r2078 /* calculate size of a patched file directly */
static PyObject *
patchedsize(PyObject *self, PyObject *args)
{
long orig, start, end, len, outlen = 0, last = 0;
int patchlen;
char *bin, *binend;
char decode[12]; /* for dealing with alignment issues */
if (!PyArg_ParseTuple(args, "ls#", &orig, &bin, &patchlen))
return NULL;
binend = bin + patchlen;
while (bin < binend) {
memcpy(decode, bin, 12);
start = ntohl(*(uint32_t *)decode);
end = ntohl(*(uint32_t *)(decode + 4));
len = ntohl(*(uint32_t *)(decode + 8));
bin += 12 + len;
outlen += start - last;
last = end;
outlen += len;
}
if (bin != binend) {
if (!PyErr_Occurred())
PyErr_SetString(mpatch_Error, "patch cannot be decoded");
return NULL;
}
outlen += orig - last;
return Py_BuildValue("l", outlen);
}
mpm@selenic.com
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r72 static PyMethodDef methods[] = {
{"patches", patches, METH_VARARGS, "apply a series of patches\n"},
mason@suse.com
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r2078 {"patchedsize", patchedsize, METH_VARARGS, "calculed patched size\n"},
mpm@selenic.com
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r72 {NULL, NULL}
};
PyMODINIT_FUNC
initmpatch(void)
{
Py_InitModule3("mpatch", methods, mpatch_doc);
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catch errors and throw exception with invalid binary patch data
r1722 mpatch_Error = PyErr_NewException("mpatch.mpatchError", NULL, NULL);
mpm@selenic.com
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r72 }