##// END OF EJS Templates
xdiff: add a preprocessing step that trims files...
xdiff: add a preprocessing step that trims files xdiff has a `xdl_trim_ends` step that removes common lines, unmatchable lines. That is in theory good, but happens too late - after splitting, hashing, and adjusting the hash values so they are unique. Those splitting, hashing and adjusting hash values steps could have noticeable overhead. Diffing two large files with minor (one-line-ish) changes are not uncommon. In that case, the raw performance of those preparation steps seriously matter. Even allocating an O(N) array and storing line offsets to it is expensive. Therefore my previous attempts [1] [2] cannot be good enough since they do not remove the O(N) array assignment. This patch adds a preprocessing step - `xdl_trim_files` that runs before other preprocessing steps. It counts common prefix and suffix and lines in them (needed for displaying line number), without doing anything else. Testing with a crafted large (169MB) file, with minor change: ``` open('a','w').write(''.join('%s\n' % (i % 100000) for i in xrange(30000000) if i != 6000000)) open('b','w').write(''.join('%s\n' % (i % 100000) for i in xrange(30000000) if i != 6003000)) ``` Running xdiff by a simple binary [3], this patch improves the xdiff perf by more than 10x for the above case: ``` # xdiff before this patch 2.41s user 1.13s system 98% cpu 3.592 total # xdiff after this patch 0.14s user 0.16s system 98% cpu 0.309 total # gnu diffutils 0.12s user 0.15s system 98% cpu 0.272 total # (best of 20 runs) ``` It's still slightly slower than GNU diffutils. But it's pretty close now. Testing with real repo data: For the whole repo, this patch makes xdiff 25% faster: ``` # hg perfbdiff --count 100 --alldata -c d334afc585e2 --blocks [--xdiff] # xdiff, after ! wall 0.058861 comb 0.050000 user 0.050000 sys 0.000000 (best of 100) # xdiff, before ! wall 0.077816 comb 0.080000 user 0.080000 sys 0.000000 (best of 91) # bdiff ! wall 0.117473 comb 0.120000 user 0.120000 sys 0.000000 (best of 67) ``` For files that are long (ex. commands.py), the speedup is more than 3x, very significant: ``` # hg perfbdiff --count 3000 --blocks commands.py.i 1 [--xdiff] # xdiff, after ! wall 0.690583 comb 0.690000 user 0.690000 sys 0.000000 (best of 12) # xdiff, before ! wall 2.240361 comb 2.210000 user 2.210000 sys 0.000000 (best of 4) # bdiff ! wall 2.469852 comb 2.440000 user 2.440000 sys 0.000000 (best of 4) ``` [1]: https://phab.mercurial-scm.org/D2631 [2]: https://phab.mercurial-scm.org/D2634 [3]: ``` // Code to run xdiff from command line. No proper error handling. #include <stdlib.h> #include <unistd.h> #include <sys/types.h> #include <sys/stat.h> #include <fcntl.h> #include "mercurial/thirdparty/xdiff/xdiff.h" #define ensure(x) if (!(x)) exit(255); mmfile_t readfile(const char *path) { struct stat st; int fd = open(path, O_RDONLY); fstat(fd, &st); mmfile_t file = { malloc(st.st_size), st.st_size }; ensure(read(fd, file.ptr, st.st_size) == st.st_size); close(fd); return file; } int main(int argc, char const *argv[]) { mmfile_t a = readfile(argv[1]), b = readfile(argv[2]); xpparam_t xpp = {0}; xdemitconf_t xecfg = {0}; xdemitcb_t ecb = {0}; xdl_diff(&a, &b, &xpp, &xecfg, &ecb); return 0; } ``` Differential Revision: https://phab.mercurial-scm.org/D2686

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ancestor.py
363 lines | 12.1 KiB | text/x-python | PythonLexer
# ancestor.py - generic DAG ancestor algorithm for mercurial
#
# Copyright 2006 Matt Mackall <mpm@selenic.com>
#
# This software may be used and distributed according to the terms of the
# GNU General Public License version 2 or any later version.
from __future__ import absolute_import
import collections
import heapq
from .node import nullrev
def commonancestorsheads(pfunc, *nodes):
"""Returns a set with the heads of all common ancestors of all nodes,
heads(::nodes[0] and ::nodes[1] and ...) .
pfunc must return a list of parent vertices for a given vertex.
"""
if not isinstance(nodes, set):
nodes = set(nodes)
if nullrev in nodes:
return set()
if len(nodes) <= 1:
return nodes
allseen = (1 << len(nodes)) - 1
seen = [0] * (max(nodes) + 1)
for i, n in enumerate(nodes):
seen[n] = 1 << i
poison = 1 << (i + 1)
gca = set()
interesting = len(nodes)
nv = len(seen) - 1
while nv >= 0 and interesting:
v = nv
nv -= 1
if not seen[v]:
continue
sv = seen[v]
if sv < poison:
interesting -= 1
if sv == allseen:
gca.add(v)
sv |= poison
if v in nodes:
# history is linear
return {v}
if sv < poison:
for p in pfunc(v):
sp = seen[p]
if p == nullrev:
continue
if sp == 0:
seen[p] = sv
interesting += 1
elif sp != sv:
seen[p] |= sv
else:
for p in pfunc(v):
if p == nullrev:
continue
sp = seen[p]
if sp and sp < poison:
interesting -= 1
seen[p] = sv
return gca
def ancestors(pfunc, *orignodes):
"""
Returns the common ancestors of a and b that are furthest from a
root (as measured by longest path).
pfunc must return a list of parent vertices for a given vertex.
"""
def deepest(nodes):
interesting = {}
count = max(nodes) + 1
depth = [0] * count
seen = [0] * count
mapping = []
for (i, n) in enumerate(sorted(nodes)):
depth[n] = 1
b = 1 << i
seen[n] = b
interesting[b] = 1
mapping.append((b, n))
nv = count - 1
while nv >= 0 and len(interesting) > 1:
v = nv
nv -= 1
dv = depth[v]
if dv == 0:
continue
sv = seen[v]
for p in pfunc(v):
if p == nullrev:
continue
dp = depth[p]
nsp = sp = seen[p]
if dp <= dv:
depth[p] = dv + 1
if sp != sv:
interesting[sv] += 1
nsp = seen[p] = sv
if sp:
interesting[sp] -= 1
if interesting[sp] == 0:
del interesting[sp]
elif dv == dp - 1:
nsp = sp | sv
if nsp == sp:
continue
seen[p] = nsp
interesting.setdefault(nsp, 0)
interesting[nsp] += 1
interesting[sp] -= 1
if interesting[sp] == 0:
del interesting[sp]
interesting[sv] -= 1
if interesting[sv] == 0:
del interesting[sv]
if len(interesting) != 1:
return []
k = 0
for i in interesting:
k |= i
return set(n for (i, n) in mapping if k & i)
gca = commonancestorsheads(pfunc, *orignodes)
if len(gca) <= 1:
return gca
return deepest(gca)
class incrementalmissingancestors(object):
'''persistent state used to calculate missing ancestors incrementally
Although similar in spirit to lazyancestors below, this is a separate class
because trying to support contains and missingancestors operations with the
same internal data structures adds needless complexity.'''
def __init__(self, pfunc, bases):
self.bases = set(bases)
if not self.bases:
self.bases.add(nullrev)
self.pfunc = pfunc
def hasbases(self):
'''whether the common set has any non-trivial bases'''
return self.bases and self.bases != {nullrev}
def addbases(self, newbases):
'''grow the ancestor set by adding new bases'''
self.bases.update(newbases)
def removeancestorsfrom(self, revs):
'''remove all ancestors of bases from the set revs (in place)'''
bases = self.bases
pfunc = self.pfunc
revs.difference_update(bases)
# nullrev is always an ancestor
revs.discard(nullrev)
if not revs:
return
# anything in revs > start is definitely not an ancestor of bases
# revs <= start needs to be investigated
start = max(bases)
keepcount = sum(1 for r in revs if r > start)
if len(revs) == keepcount:
# no revs to consider
return
for curr in xrange(start, min(revs) - 1, -1):
if curr not in bases:
continue
revs.discard(curr)
bases.update(pfunc(curr))
if len(revs) == keepcount:
# no more potential revs to discard
break
def missingancestors(self, revs):
'''return all the ancestors of revs that are not ancestors of self.bases
This may include elements from revs.
Equivalent to the revset (::revs - ::self.bases). Revs are returned in
revision number order, which is a topological order.'''
revsvisit = set(revs)
basesvisit = self.bases
pfunc = self.pfunc
bothvisit = revsvisit.intersection(basesvisit)
revsvisit.difference_update(bothvisit)
if not revsvisit:
return []
start = max(max(revsvisit), max(basesvisit))
# At this point, we hold the invariants that:
# - revsvisit is the set of nodes we know are an ancestor of at least
# one of the nodes in revs
# - basesvisit is the same for bases
# - bothvisit is the set of nodes we know are ancestors of at least one
# of the nodes in revs and one of the nodes in bases. bothvisit and
# revsvisit are mutually exclusive, but bothvisit is a subset of
# basesvisit.
# Now we walk down in reverse topo order, adding parents of nodes
# already visited to the sets while maintaining the invariants. When a
# node is found in both revsvisit and basesvisit, it is removed from
# revsvisit and added to bothvisit. When revsvisit becomes empty, there
# are no more ancestors of revs that aren't also ancestors of bases, so
# exit.
missing = []
for curr in xrange(start, nullrev, -1):
if not revsvisit:
break
if curr in bothvisit:
bothvisit.remove(curr)
# curr's parents might have made it into revsvisit through
# another path
for p in pfunc(curr):
revsvisit.discard(p)
basesvisit.add(p)
bothvisit.add(p)
continue
if curr in revsvisit:
missing.append(curr)
revsvisit.remove(curr)
thisvisit = revsvisit
othervisit = basesvisit
elif curr in basesvisit:
thisvisit = basesvisit
othervisit = revsvisit
else:
# not an ancestor of revs or bases: ignore
continue
for p in pfunc(curr):
if p == nullrev:
pass
elif p in othervisit or p in bothvisit:
# p is implicitly in thisvisit. This means p is or should be
# in bothvisit
revsvisit.discard(p)
basesvisit.add(p)
bothvisit.add(p)
else:
# visit later
thisvisit.add(p)
missing.reverse()
return missing
class lazyancestors(object):
def __init__(self, pfunc, revs, stoprev=0, inclusive=False):
"""Create a new object generating ancestors for the given revs. Does
not generate revs lower than stoprev.
This is computed lazily starting from revs. The object supports
iteration and membership.
cl should be a changelog and revs should be an iterable. inclusive is
a boolean that indicates whether revs should be included. Revs lower
than stoprev will not be generated.
Result does not include the null revision."""
self._parentrevs = pfunc
self._initrevs = revs
self._stoprev = stoprev
self._inclusive = inclusive
# Initialize data structures for __contains__.
# For __contains__, we use a heap rather than a deque because
# (a) it minimizes the number of parentrevs calls made
# (b) it makes the loop termination condition obvious
# Python's heap is a min-heap. Multiply all values by -1 to convert it
# into a max-heap.
self._containsvisit = [-rev for rev in revs]
heapq.heapify(self._containsvisit)
if inclusive:
self._containsseen = set(revs)
else:
self._containsseen = set()
def __nonzero__(self):
"""False if the set is empty, True otherwise."""
try:
next(iter(self))
return True
except StopIteration:
return False
__bool__ = __nonzero__
def __iter__(self):
"""Generate the ancestors of _initrevs in reverse topological order.
If inclusive is False, yield a sequence of revision numbers starting
with the parents of each revision in revs, i.e., each revision is *not*
considered an ancestor of itself. Results are in breadth-first order:
parents of each rev in revs, then parents of those, etc.
If inclusive is True, yield all the revs first (ignoring stoprev),
then yield all the ancestors of revs as when inclusive is False.
If an element in revs is an ancestor of a different rev it is not
yielded again."""
seen = set()
revs = self._initrevs
if self._inclusive:
for rev in revs:
yield rev
seen.update(revs)
parentrevs = self._parentrevs
stoprev = self._stoprev
visit = collections.deque(revs)
see = seen.add
schedule = visit.append
while visit:
for parent in parentrevs(visit.popleft()):
if parent >= stoprev and parent not in seen:
schedule(parent)
see(parent)
yield parent
def __contains__(self, target):
"""Test whether target is an ancestor of self._initrevs."""
# Trying to do both __iter__ and __contains__ using the same visit
# heap and seen set is complex enough that it slows down both. Keep
# them separate.
seen = self._containsseen
if target in seen:
return True
parentrevs = self._parentrevs
visit = self._containsvisit
stoprev = self._stoprev
heappop = heapq.heappop
heappush = heapq.heappush
see = seen.add
targetseen = False
while visit and -visit[0] > target and not targetseen:
for parent in parentrevs(-heappop(visit)):
if parent < stoprev or parent in seen:
continue
# We need to make sure we push all parents into the heap so
# that we leave it in a consistent state for future calls.
heappush(visit, -parent)
see(parent)
if parent == target:
targetseen = True
return targetseen