Merge pull request #2175 from minrk/staticfile

add FileFindHandler for Notebook static files

  * The static file handler now uses a search path, instead of a single dir.

    This allows easier customization of available js/css,
    and provides a place for extra files to go for extending the notebook.


  * An empty custom.js / custom.css are added to the templates for trivial 
    custom user styling/scripting.

    The search only happens once, and the result is cached after the first.

  * A few methods are pulled from tornado 2.2-dev verbatim to have tornado 2.1 compatibility.

  * mathjax is now installed by default in profile.

IPython/frontend/html/notebook/static/css/custom.css

@@ -0,0 +1,7
+/*
+Placeholder for custom user CSS
+
+mainly to be overridden in profile/static/css/custom.css
+
+This will always be an empty file in IPython
+*/
  No newline at end of file

IPython/frontend/html/notebook/static/js/custom.js

@@ -0,0 +1,7
+/*
+Placeholder for custom user javascript
+
+mainly to be overridden in profile/static/js/custom.js
+
+This will always be an empty file in IPython
+*/

IPython/external/mathjax.py

@@ -1,82 +1,93
 """Utility function for installing MathJax javascript library into
 the notebook's 'static' directory, for offline use.
 
 Authors:
 
 * Min RK
 """
 
 #-----------------------------------------------------------------------------
 #  Copyright (C) 2008-2011  The IPython Development Team
 #
 #  Distributed under the terms of the BSD License.  The full license is in
 #  the file COPYING, distributed as part of this software.
 #-----------------------------------------------------------------------------
 
 #-----------------------------------------------------------------------------
 # Imports
 #-----------------------------------------------------------------------------
 
 import os
 import shutil
 import urllib2
 import tempfile
 import tarfile
 
-from IPython.frontend.html import notebook as nbmod
+from IPython.utils.path import locate_profile
 
 #-----------------------------------------------------------------------------
 # Imports
 #-----------------------------------------------------------------------------
 
-def install_mathjax(tag='v1.1', replace=False):
+def install_mathjax(tag='v2.0', replace=False, dest=None):
     """Download and install MathJax for offline use.
     
-    This will install mathjax to the 'static' dir in the IPython notebook
-    package, so it will fail if the caller does not have write access
-    to that location.
+    You can use this to install mathjax to a location on your static file
+    path. This includes the `static` directory within your IPython profile,
+    which is the default location for this install.
     
     MathJax is a ~15MB download, and ~150MB installed.
     
     Parameters
     ----------
     
     replace : bool [False]
         Whether to remove and replace an existing install.
-    tag : str ['v1.1']
-        Which tag to download. Default is 'v1.1', the current stable release,
-        but alternatives include 'v1.1a' and 'master'.
+    tag : str ['v2.0']
+        Which tag to download. Default is 'v2.0', the current stable release,
+        but alternatives include 'v1.1' and 'master'.
+    dest : path
+        The path to the directory in which mathjax will be installed.
+        The default is `IPYTHONDIR/profile_default/static`.
+        dest must be on your notebook static_path when you run the notebook server.
+        The default location works for this.
     """
-    mathjax_url = "https://github.com/mathjax/MathJax/tarball/%s"%tag
     
-    nbdir = os.path.dirname(os.path.abspath(nbmod.__file__))
-    static = os.path.join(nbdir, 'static')
+    mathjax_url = "https://github.com/mathjax/MathJax/tarball/%s" % tag
+    
+    if dest is None:
+        dest = os.path.join(locate_profile('default'), 'static')
+    
+    if not os.path.exists(dest):
+        os.mkdir(dest)
+    
+    static = dest
     dest = os.path.join(static, 'mathjax')
     
     # check for existence and permissions
     if not os.access(static, os.W_OK):
-        raise IOError("Need have write access to %s"%static)
+        raise IOError("Need have write access to %s" % static)
     if os.path.exists(dest):
         if replace:
             if not os.access(dest, os.W_OK):
-                raise IOError("Need have write access to %s"%dest)
+                raise IOError("Need have write access to %s" % dest)
             print "removing previous MathJax install"
             shutil.rmtree(dest)
         else:
             print "offline MathJax apparently already installed"
             return
     
     # download mathjax
-    print "Downloading mathjax source..."
+    print "Downloading mathjax source from %s ..." % mathjax_url
     response = urllib2.urlopen(mathjax_url)
     print "done"
     # use 'r|gz' stream mode, because socket file-like objects can't seek:
     tar = tarfile.open(fileobj=response.fp, mode='r|gz')
     topdir = tar.firstmember.path
-    print "Extracting to %s"%dest
+    print "Extracting to %s" % dest
     tar.extractall(static)
     # it will be mathjax-MathJax-<sha>, rename to just mathjax
     os.rename(os.path.join(static, topdir), dest)
 
 
 __all__ = ['install_mathjax']

IPython/frontend/html/notebook/handlers.py

@@ -1,738 +1,920
 """Tornado handlers for the notebook.
 
 Authors:
 
 * Brian Granger
 """
 
 #-----------------------------------------------------------------------------
 #  Copyright (C) 2008-2011  The IPython Development Team
 #
 #  Distributed under the terms of the BSD License.  The full license is in
 #  the file COPYING, distributed as part of this software.
 #-----------------------------------------------------------------------------
 
 #-----------------------------------------------------------------------------
 # Imports
 #-----------------------------------------------------------------------------
 
-import logging
 import Cookie
+import datetime
+import email.utils
+import hashlib
+import logging
+import mimetypes
+import os
+import stat
+import threading
 import time
 import uuid
 
 from tornado import web
 from tornado import websocket
 
 from zmq.eventloop import ioloop
 from zmq.utils import jsonapi
 
 from IPython.external.decorator import decorator
 from IPython.zmq.session import Session
 from IPython.lib.security import passwd_check
 from IPython.utils.jsonutil import date_default
+from IPython.utils.path import filefind
 
 try:
     from docutils.core import publish_string
 except ImportError:
     publish_string = None
 
 #-----------------------------------------------------------------------------
 # Monkeypatch for Tornado <= 2.1.1 - Remove when no longer necessary!
 #-----------------------------------------------------------------------------
 
 # Google Chrome, as of release 16, changed its websocket protocol number.  The
 # parts tornado cares about haven't really changed, so it's OK to continue
 # accepting Chrome connections, but as of Tornado 2.1.1 (the currently released
 # version as of Oct 30/2011) the version check fails, see the issue report:
 
 # https://github.com/facebook/tornado/issues/385
 
 # This issue has been fixed in Tornado post 2.1.1:
 
 # https://github.com/facebook/tornado/commit/84d7b458f956727c3b0d6710
 
 # Here we manually apply the same patch as above so that users of IPython can
 # continue to work with an officially released Tornado.  We make the
 # monkeypatch version check as narrow as possible to limit its effects; once
 # Tornado 2.1.1 is no longer found in the wild we'll delete this code.
 
 import tornado
 
 if tornado.version_info <= (2,1,1):
 
     def _execute(self, transforms, *args, **kwargs):
         from tornado.websocket import WebSocketProtocol8, WebSocketProtocol76
         
         self.open_args = args
         self.open_kwargs = kwargs
 
         # The difference between version 8 and 13 is that in 8 the
         # client sends a "Sec-Websocket-Origin" header and in 13 it's
         # simply "Origin".
         if self.request.headers.get("Sec-WebSocket-Version") in ("7", "8", "13"):
             self.ws_connection = WebSocketProtocol8(self)
             self.ws_connection.accept_connection()
             
         elif self.request.headers.get("Sec-WebSocket-Version"):
             self.stream.write(tornado.escape.utf8(
                 "HTTP/1.1 426 Upgrade Required\r\n"
                 "Sec-WebSocket-Version: 8\r\n\r\n"))
             self.stream.close()
             
         else:
             self.ws_connection = WebSocketProtocol76(self)
             self.ws_connection.accept_connection()
 
     websocket.WebSocketHandler._execute = _execute
     del _execute
     
 #-----------------------------------------------------------------------------
 # Decorator for disabling read-only handlers
 #-----------------------------------------------------------------------------
 
 @decorator
 def not_if_readonly(f, self, *args, **kwargs):
     if self.application.read_only:
         raise web.HTTPError(403, "Notebook server is read-only")
     else:
         return f(self, *args, **kwargs)
 
 @decorator
 def authenticate_unless_readonly(f, self, *args, **kwargs):
     """authenticate this page *unless* readonly view is active.
     
     In read-only mode, the notebook list and print view should
     be accessible without authentication.
     """
     
     @web.authenticated
     def auth_f(self, *args, **kwargs):
         return f(self, *args, **kwargs)
 
     if self.application.read_only:
         return f(self, *args, **kwargs)
     else:
         return auth_f(self, *args, **kwargs)
 
 #-----------------------------------------------------------------------------
 # Top-level handlers
 #-----------------------------------------------------------------------------
 
 class RequestHandler(web.RequestHandler):
     """RequestHandler with default variable setting."""
 
     def render(*args, **kwargs):
         kwargs.setdefault('message', '')
         return web.RequestHandler.render(*args, **kwargs)
 
 class AuthenticatedHandler(RequestHandler):
     """A RequestHandler with an authenticated user."""
 
     def get_current_user(self):
         user_id = self.get_secure_cookie("username")
         # For now the user_id should not return empty, but it could eventually
         if user_id == '':
             user_id = 'anonymous'
         if user_id is None:
             # prevent extra Invalid cookie sig warnings:
             self.clear_cookie('username')
             if not self.application.password and not self.application.read_only:
                 user_id = 'anonymous'
         return user_id
 
     @property
     def logged_in(self):
         """Is a user currently logged in?
 
         """
         user = self.get_current_user()
         return (user and not user == 'anonymous')
 
     @property
     def login_available(self):
         """May a user proceed to log in?
 
         This returns True if login capability is available, irrespective of
         whether the user is already logged in or not.
 
         """
         return bool(self.application.password)
 
     @property
     def read_only(self):
         """Is the notebook read-only?
 
         """
         return self.application.read_only
 
     @property
     def ws_url(self):
         """websocket url matching the current request
 
         turns http[s]://host[:port] into
                 ws[s]://host[:port]
         """
         proto = self.request.protocol.replace('http', 'ws')
         host = self.application.ipython_app.websocket_host # default to config value
         if host == '':
             host = self.request.host # get from request
         return "%s://%s" % (proto, host)
 
 
 class AuthenticatedFileHandler(AuthenticatedHandler, web.StaticFileHandler):
     """static files should only be accessible when logged in"""
 
     @authenticate_unless_readonly
     def get(self, path):
         return web.StaticFileHandler.get(self, path)
 
 
 class ProjectDashboardHandler(AuthenticatedHandler):
 
     @authenticate_unless_readonly
     def get(self):
         nbm = self.application.notebook_manager
         project = nbm.notebook_dir
         self.render(
             'projectdashboard.html', project=project,
             base_project_url=self.application.ipython_app.base_project_url,
             base_kernel_url=self.application.ipython_app.base_kernel_url,
             read_only=self.read_only,
             logged_in=self.logged_in,
             login_available=self.login_available
         )
 
 
 class LoginHandler(AuthenticatedHandler):
 
     def _render(self, message=None):
         self.render('login.html',
                 next=self.get_argument('next', default=self.application.ipython_app.base_project_url),
                 read_only=self.read_only,
                 logged_in=self.logged_in,
                 login_available=self.login_available,
                 base_project_url=self.application.ipython_app.base_project_url,
                 message=message
         )
 
     def get(self):
         if self.current_user:
             self.redirect(self.get_argument('next', default=self.application.ipython_app.base_project_url))
         else:
             self._render()
 
     def post(self):
         pwd = self.get_argument('password', default=u'')
         if self.application.password:
             if passwd_check(self.application.password, pwd):
                 self.set_secure_cookie('username', str(uuid.uuid4()))
             else:
                 self._render(message={'error': 'Invalid password'})
                 return
 
         self.redirect(self.get_argument('next', default=self.application.ipython_app.base_project_url))
 
 
 class LogoutHandler(AuthenticatedHandler):
 
     def get(self):
         self.clear_cookie('username')
         if self.login_available:
             message = {'info': 'Successfully logged out.'}
         else:
             message = {'warning': 'Cannot log out.  Notebook authentication '
                        'is disabled.'}
 
         self.render('logout.html',
                     read_only=self.read_only,
                     logged_in=self.logged_in,
                     login_available=self.login_available,
                     base_project_url=self.application.ipython_app.base_project_url,
                     message=message)
 
 
 class NewHandler(AuthenticatedHandler):
 
     @web.authenticated
     def get(self):
         nbm = self.application.notebook_manager
         project = nbm.notebook_dir
         notebook_id = nbm.new_notebook()
         self.render(
             'notebook.html', project=project,
             notebook_id=notebook_id,
             base_project_url=self.application.ipython_app.base_project_url,
             base_kernel_url=self.application.ipython_app.base_kernel_url,
             kill_kernel=False,
             read_only=False,
             logged_in=self.logged_in,
             login_available=self.login_available,
             mathjax_url=self.application.ipython_app.mathjax_url,
         )
 
 
 class NamedNotebookHandler(AuthenticatedHandler):
 
     @authenticate_unless_readonly
     def get(self, notebook_id):
         nbm = self.application.notebook_manager
         project = nbm.notebook_dir
         if not nbm.notebook_exists(notebook_id):
             raise web.HTTPError(404, u'Notebook does not exist: %s' % notebook_id)
         
         self.render(
             'notebook.html', project=project,
             notebook_id=notebook_id,
             base_project_url=self.application.ipython_app.base_project_url,
             base_kernel_url=self.application.ipython_app.base_kernel_url,
             kill_kernel=False,
             read_only=self.read_only,
             logged_in=self.logged_in,
             login_available=self.login_available,
             mathjax_url=self.application.ipython_app.mathjax_url,
         )
 
 
 class PrintNotebookHandler(AuthenticatedHandler):
 
     @authenticate_unless_readonly
     def get(self, notebook_id):
         nbm = self.application.notebook_manager
         project = nbm.notebook_dir
         if not nbm.notebook_exists(notebook_id):
             raise web.HTTPError(404, u'Notebook does not exist: %s' % notebook_id)
         
         self.render(
             'printnotebook.html', project=project,
             notebook_id=notebook_id,
             base_project_url=self.application.ipython_app.base_project_url,
             base_kernel_url=self.application.ipython_app.base_kernel_url,
             kill_kernel=False,
             read_only=self.read_only,
             logged_in=self.logged_in,
             login_available=self.login_available,
             mathjax_url=self.application.ipython_app.mathjax_url,
         )
 
 #-----------------------------------------------------------------------------
 # Kernel handlers
 #-----------------------------------------------------------------------------
 
 
 class MainKernelHandler(AuthenticatedHandler):
 
     @web.authenticated
     def get(self):
         km = self.application.kernel_manager
         self.finish(jsonapi.dumps(km.kernel_ids))
 
     @web.authenticated
     def post(self):
         km = self.application.kernel_manager
         nbm = self.application.notebook_manager
         notebook_id = self.get_argument('notebook', default=None)
         kernel_id = km.start_kernel(notebook_id, cwd=nbm.notebook_dir)
         data = {'ws_url':self.ws_url,'kernel_id':kernel_id}
         self.set_header('Location', '/'+kernel_id)
         self.finish(jsonapi.dumps(data))
 
 
 class KernelHandler(AuthenticatedHandler):
 
     SUPPORTED_METHODS = ('DELETE')
 
     @web.authenticated
     def delete(self, kernel_id):
         km = self.application.kernel_manager
         km.shutdown_kernel(kernel_id)
         self.set_status(204)
         self.finish()
 
 
 class KernelActionHandler(AuthenticatedHandler):
 
     @web.authenticated
     def post(self, kernel_id, action):
         km = self.application.kernel_manager
         if action == 'interrupt':
             km.interrupt_kernel(kernel_id)
             self.set_status(204)
         if action == 'restart':
             new_kernel_id = km.restart_kernel(kernel_id)
             data = {'ws_url':self.ws_url,'kernel_id':new_kernel_id}
             self.set_header('Location', '/'+new_kernel_id)
             self.write(jsonapi.dumps(data))
         self.finish()
 
 
 class ZMQStreamHandler(websocket.WebSocketHandler):
 
     def _reserialize_reply(self, msg_list):
         """Reserialize a reply message using JSON.
 
         This takes the msg list from the ZMQ socket, unserializes it using
         self.session and then serializes the result using JSON. This method
         should be used by self._on_zmq_reply to build messages that can
         be sent back to the browser.
         """
         idents, msg_list = self.session.feed_identities(msg_list)
         msg = self.session.unserialize(msg_list)
         try:
             msg['header'].pop('date')
         except KeyError:
             pass
         try:
             msg['parent_header'].pop('date')
         except KeyError:
             pass
         msg.pop('buffers')
         return jsonapi.dumps(msg, default=date_default)
 
     def _on_zmq_reply(self, msg_list):
         try:
             msg = self._reserialize_reply(msg_list)
         except Exception:
             self.application.log.critical("Malformed message: %r" % msg_list, exc_info=True)
         else:
             self.write_message(msg)
 
     def allow_draft76(self):
         """Allow draft 76, until browsers such as Safari update to RFC 6455.
         
         This has been disabled by default in tornado in release 2.2.0, and
         support will be removed in later versions.
         """
         return True
 
 
 class AuthenticatedZMQStreamHandler(ZMQStreamHandler):
 
     def open(self, kernel_id):
         self.kernel_id = kernel_id.decode('ascii')
         try:
             cfg = self.application.ipython_app.config
         except AttributeError:
             # protect from the case where this is run from something other than
             # the notebook app:
             cfg = None
         self.session = Session(config=cfg)
         self.save_on_message = self.on_message
         self.on_message = self.on_first_message
 
     def get_current_user(self):
         user_id = self.get_secure_cookie("username")
         if user_id == '' or (user_id is None and not self.application.password):
             user_id = 'anonymous'
         return user_id
 
     def _inject_cookie_message(self, msg):
         """Inject the first message, which is the document cookie,
         for authentication."""
         if isinstance(msg, unicode):
             # Cookie can't constructor doesn't accept unicode strings for some reason
             msg = msg.encode('utf8', 'replace')
         try:
             self.request._cookies = Cookie.SimpleCookie(msg)
         except:
             logging.warn("couldn't parse cookie string: %s",msg, exc_info=True)
 
     def on_first_message(self, msg):
         self._inject_cookie_message(msg)
         if self.get_current_user() is None:
             logging.warn("Couldn't authenticate WebSocket connection")
             raise web.HTTPError(403)
         self.on_message = self.save_on_message
 
 
 class IOPubHandler(AuthenticatedZMQStreamHandler):
 
     def initialize(self, *args, **kwargs):
         self._kernel_alive = True
         self._beating = False
         self.iopub_stream = None
         self.hb_stream = None
 
     def on_first_message(self, msg):
         try:
             super(IOPubHandler, self).on_first_message(msg)
         except web.HTTPError:
             self.close()
             return
         km = self.application.kernel_manager
         self.time_to_dead = km.time_to_dead
         self.first_beat = km.first_beat
         kernel_id = self.kernel_id
         try:
             self.iopub_stream = km.create_iopub_stream(kernel_id)
             self.hb_stream = km.create_hb_stream(kernel_id)
         except web.HTTPError:
             # WebSockets don't response to traditional error codes so we
             # close the connection.
             if not self.stream.closed():
                 self.stream.close()
             self.close()
         else:
             self.iopub_stream.on_recv(self._on_zmq_reply)
             self.start_hb(self.kernel_died)
 
     def on_message(self, msg):
         pass
 
     def on_close(self):
         # This method can be called twice, once by self.kernel_died and once
         # from the WebSocket close event. If the WebSocket connection is
         # closed before the ZMQ streams are setup, they could be None.
         self.stop_hb()
         if self.iopub_stream is not None and not self.iopub_stream.closed():
             self.iopub_stream.on_recv(None)
             self.iopub_stream.close()
         if self.hb_stream is not None and not self.hb_stream.closed():
             self.hb_stream.close()
 
     def start_hb(self, callback):
         """Start the heartbeating and call the callback if the kernel dies."""
         if not self._beating:
             self._kernel_alive = True
 
             def ping_or_dead():
                 self.hb_stream.flush()
                 if self._kernel_alive:
                     self._kernel_alive = False
                     self.hb_stream.send(b'ping')
                     # flush stream to force immediate socket send
                     self.hb_stream.flush()
                 else:
                     try:
                         callback()
                     except:
                         pass
                     finally:
                         self.stop_hb()
 
             def beat_received(msg):
                 self._kernel_alive = True
 
             self.hb_stream.on_recv(beat_received)
             loop = ioloop.IOLoop.instance()
             self._hb_periodic_callback = ioloop.PeriodicCallback(ping_or_dead, self.time_to_dead*1000, loop)
             loop.add_timeout(time.time()+self.first_beat, self._really_start_hb)
             self._beating= True
     
     def _really_start_hb(self):
         """callback for delayed heartbeat start
         
         Only start the hb loop if we haven't been closed during the wait.
         """
         if self._beating and not self.hb_stream.closed():
             self._hb_periodic_callback.start()
 
     def stop_hb(self):
         """Stop the heartbeating and cancel all related callbacks."""
         if self._beating:
             self._beating = False
             self._hb_periodic_callback.stop()
             if not self.hb_stream.closed():
                 self.hb_stream.on_recv(None)
 
     def kernel_died(self):
         self.application.kernel_manager.delete_mapping_for_kernel(self.kernel_id)
         self.application.log.error("Kernel %s failed to respond to heartbeat", self.kernel_id)
         self.write_message(
             {'header': {'msg_type': 'status'},
              'parent_header': {},
              'content': {'execution_state':'dead'}
             }
         )
         self.on_close()
 
 
 class ShellHandler(AuthenticatedZMQStreamHandler):
 
     def initialize(self, *args, **kwargs):
         self.shell_stream = None
 
     def on_first_message(self, msg):
         try:
             super(ShellHandler, self).on_first_message(msg)
         except web.HTTPError:
             self.close()
             return
         km = self.application.kernel_manager
         self.max_msg_size = km.max_msg_size
         kernel_id = self.kernel_id
         try:
             self.shell_stream = km.create_shell_stream(kernel_id)
         except web.HTTPError:
             # WebSockets don't response to traditional error codes so we
             # close the connection.
             if not self.stream.closed():
                 self.stream.close()
             self.close()
         else:
             self.shell_stream.on_recv(self._on_zmq_reply)
 
     def on_message(self, msg):
         if len(msg) < self.max_msg_size:
             msg = jsonapi.loads(msg)
             self.session.send(self.shell_stream, msg)
 
     def on_close(self):
         # Make sure the stream exists and is not already closed.
         if self.shell_stream is not None and not self.shell_stream.closed():
             self.shell_stream.close()
 
 
 #-----------------------------------------------------------------------------
 # Notebook web service handlers
 #-----------------------------------------------------------------------------
 
 class NotebookRootHandler(AuthenticatedHandler):
 
     @authenticate_unless_readonly
     def get(self):
         nbm = self.application.notebook_manager
         km = self.application.kernel_manager
         files = nbm.list_notebooks()
         for f in files :
             f['kernel_id'] = km.kernel_for_notebook(f['notebook_id'])
         self.finish(jsonapi.dumps(files))
 
     @web.authenticated
     def post(self):
         nbm = self.application.notebook_manager
         body = self.request.body.strip()
         format = self.get_argument('format', default='json')
         name = self.get_argument('name', default=None)
         if body:
             notebook_id = nbm.save_new_notebook(body, name=name, format=format)
         else:
             notebook_id = nbm.new_notebook()
         self.set_header('Location', '/'+notebook_id)
         self.finish(jsonapi.dumps(notebook_id))
 
 
 class NotebookHandler(AuthenticatedHandler):
 
     SUPPORTED_METHODS = ('GET', 'PUT', 'DELETE')
 
     @authenticate_unless_readonly
     def get(self, notebook_id):
         nbm = self.application.notebook_manager
         format = self.get_argument('format', default='json')
         last_mod, name, data = nbm.get_notebook(notebook_id, format)
         
         if format == u'json':
             self.set_header('Content-Type', 'application/json')
             self.set_header('Content-Disposition','attachment; filename="%s.ipynb"' % name)
         elif format == u'py':
             self.set_header('Content-Type', 'application/x-python')
             self.set_header('Content-Disposition','attachment; filename="%s.py"' % name)
         self.set_header('Last-Modified', last_mod)
         self.finish(data)
 
     @web.authenticated
     def put(self, notebook_id):
         nbm = self.application.notebook_manager
         format = self.get_argument('format', default='json')
         name = self.get_argument('name', default=None)
         nbm.save_notebook(notebook_id, self.request.body, name=name, format=format)
         self.set_status(204)
         self.finish()
 
     @web.authenticated
     def delete(self, notebook_id):
         nbm = self.application.notebook_manager
         nbm.delete_notebook(notebook_id)
         self.set_status(204)
         self.finish()
 
 
 class NotebookCopyHandler(AuthenticatedHandler):
 
     @web.authenticated
     def get(self, notebook_id):
         nbm = self.application.notebook_manager
         project = nbm.notebook_dir
         notebook_id = nbm.copy_notebook(notebook_id)
         self.render(
             'notebook.html', project=project,
             notebook_id=notebook_id,
             base_project_url=self.application.ipython_app.base_project_url,
             base_kernel_url=self.application.ipython_app.base_kernel_url,
             kill_kernel=False,
             read_only=False,
             logged_in=self.logged_in,
             login_available=self.login_available,
             mathjax_url=self.application.ipython_app.mathjax_url,
         )
 
 
 #-----------------------------------------------------------------------------
 # Cluster handlers
 #-----------------------------------------------------------------------------
 
 
 class MainClusterHandler(AuthenticatedHandler):
 
     @web.authenticated
     def get(self):
         cm = self.application.cluster_manager
         self.finish(jsonapi.dumps(cm.list_profiles()))
 
 
 class ClusterProfileHandler(AuthenticatedHandler):
 
     @web.authenticated
     def get(self, profile):
         cm = self.application.cluster_manager
         self.finish(jsonapi.dumps(cm.profile_info(profile)))
 
 
 class ClusterActionHandler(AuthenticatedHandler):
 
     @web.authenticated
     def post(self, profile, action):
         cm = self.application.cluster_manager
         if action == 'start':
             n = self.get_argument('n',default=None)
             if n is None:
                 data = cm.start_cluster(profile)
             else:
                 data = cm.start_cluster(profile,int(n))
         if action == 'stop':
             data = cm.stop_cluster(profile)
         self.finish(jsonapi.dumps(data))
 
 
 #-----------------------------------------------------------------------------
 # RST web service handlers
 #-----------------------------------------------------------------------------
 
 
 class RSTHandler(AuthenticatedHandler):
 
     @web.authenticated
     def post(self):
         if publish_string is None:
             raise web.HTTPError(503, u'docutils not available')
         body = self.request.body.strip()
         source = body
         # template_path=os.path.join(os.path.dirname(__file__), u'templates', u'rst_template.html')
         defaults = {'file_insertion_enabled': 0,
                     'raw_enabled': 0,
                     '_disable_config': 1,
                     'stylesheet_path': 0
                     # 'template': template_path
         }
         try:
             html = publish_string(source, writer_name='html',
                                   settings_overrides=defaults
             )
         except:
             raise web.HTTPError(400, u'Invalid RST')
         print html
         self.set_header('Content-Type', 'text/html')
         self.finish(html)
 
+# to minimize subclass changes:
+HTTPError = web.HTTPError
+
+class FileFindHandler(web.StaticFileHandler):
+    """subclass of StaticFileHandler for serving files from a search path"""
+    
+    _static_paths = {}
+    # _lock is needed for tornado < 2.2.0 compat
+    _lock = threading.Lock()  # protects _static_hashes
+    
+    def initialize(self, path, default_filename=None):
+        if isinstance(path, basestring):
+            path = [path]
+        self.roots = tuple(
+            os.path.abspath(os.path.expanduser(p)) + os.path.sep for p in path
+        )
+        self.default_filename = default_filename
+    
+    @classmethod
+    def locate_file(cls, path, roots):
+        """locate a file to serve on our static file search path"""
+        with cls._lock:
+            if path in cls._static_paths:
+                return cls._static_paths[path]
+            try:
+                abspath = os.path.abspath(filefind(path, roots))
+            except IOError:
+                # empty string should always give exists=False
+                return ''
+        
+            # os.path.abspath strips a trailing /
+            # it needs to be temporarily added back for requests to root/
+            if not (abspath + os.path.sep).startswith(roots):
+                raise HTTPError(403, "%s is not in root static directory", path)
+        
+            cls._static_paths[path] = abspath
+            return abspath
+    
+    def get(self, path, include_body=True):
+        path = self.parse_url_path(path)
+        
+        # begin subclass override
+        abspath = self.locate_file(path, self.roots)
+        # end subclass override
+        
+        if os.path.isdir(abspath) and self.default_filename is not None:
+            # need to look at the request.path here for when path is empty
+            # but there is some prefix to the path that was already
+            # trimmed by the routing
+            if not self.request.path.endswith("/"):
+                self.redirect(self.request.path + "/")
+                return
+            abspath = os.path.join(abspath, self.default_filename)
+        if not os.path.exists(abspath):
+            raise HTTPError(404)
+        if not os.path.isfile(abspath):
+            raise HTTPError(403, "%s is not a file", path)
+
+        stat_result = os.stat(abspath)
+        modified = datetime.datetime.fromtimestamp(stat_result[stat.ST_MTIME])
+
+        self.set_header("Last-Modified", modified)
+
+        mime_type, encoding = mimetypes.guess_type(abspath)
+        if mime_type:
+            self.set_header("Content-Type", mime_type)
+
+        cache_time = self.get_cache_time(path, modified, mime_type)
+
+        if cache_time > 0:
+            self.set_header("Expires", datetime.datetime.utcnow() + \
+                                       datetime.timedelta(seconds=cache_time))
+            self.set_header("Cache-Control", "max-age=" + str(cache_time))
+        else:
+            self.set_header("Cache-Control", "public")
+
+        self.set_extra_headers(path)
+
+        # Check the If-Modified-Since, and don't send the result if the
+        # content has not been modified
+        ims_value = self.request.headers.get("If-Modified-Since")
+        if ims_value is not None:
+            date_tuple = email.utils.parsedate(ims_value)
+            if_since = datetime.datetime.fromtimestamp(time.mktime(date_tuple))
+            if if_since >= modified:
+                self.set_status(304)
+                return
+
+        with open(abspath, "rb") as file:
+            data = file.read()
+            hasher = hashlib.sha1()
+            hasher.update(data)
+            self.set_header("Etag", '"%s"' % hasher.hexdigest())
+            if include_body:
+                self.write(data)
+            else:
+                assert self.request.method == "HEAD"
+                self.set_header("Content-Length", len(data))
+
+    @classmethod
+    def get_version(cls, settings, path):
+        """Generate the version string to be used in static URLs.
+
+        This method may be overridden in subclasses (but note that it
+        is a class method rather than a static method).  The default
+        implementation uses a hash of the file's contents.
+
+        ``settings`` is the `Application.settings` dictionary and ``path``
+        is the relative location of the requested asset on the filesystem.
+        The returned value should be a string, or ``None`` if no version
+        could be determined.
+        """
+        # begin subclass override:
+        static_paths = settings['static_path']
+        if isinstance(static_paths, basestring):
+            static_paths = [static_paths]
+        roots = tuple(
+            os.path.abspath(os.path.expanduser(p)) + os.path.sep for p in static_paths
+        )
+
+        try:
+            abs_path = filefind(path, roots)
+        except IOError:
+            logging.error("Could not find static file %r", path)
+            return None
+        
+        # end subclass override
+        
+        with cls._lock:
+            hashes = cls._static_hashes
+            if abs_path not in hashes:
+                try:
+                    f = open(abs_path, "rb")
+                    hashes[abs_path] = hashlib.md5(f.read()).hexdigest()
+                    f.close()
+                except Exception:
+                    logging.error("Could not open static file %r", path)
+                    hashes[abs_path] = None
+            hsh = hashes.get(abs_path)
+            if hsh:
+                return hsh[:5]
+        return None
+
+
+    # make_static_url and parse_url_path totally unchanged from tornado 2.2.0
+    # but needed for tornado < 2.2.0 compat
+    @classmethod
+    def make_static_url(cls, settings, path):
+        """Constructs a versioned url for the given path.
+
+        This method may be overridden in subclasses (but note that it is
+        a class method rather than an instance method).
+
+        ``settings`` is the `Application.settings` dictionary.  ``path``
+        is the static path being requested.  The url returned should be
+        relative to the current host.
+        """
+        static_url_prefix = settings.get('static_url_prefix', '/static/')
+        version_hash = cls.get_version(settings, path)
+        if version_hash:
+            return static_url_prefix + path + "?v=" + version_hash
+        return static_url_prefix + path
+
+    def parse_url_path(self, url_path):
+        """Converts a static URL path into a filesystem path.
+
+        ``url_path`` is the path component of the URL with
+        ``static_url_prefix`` removed.  The return value should be
+        filesystem path relative to ``static_path``.
+        """
+        if os.path.sep != "/":
+            url_path = url_path.replace("/", os.path.sep)
+        return url_path
+
 

IPython/frontend/html/notebook/notebookapp.py

@@ -1,593 +1,611
 # coding: utf-8
 """A tornado based IPython notebook server.
 
 Authors:
 
 * Brian Granger
 """
 #-----------------------------------------------------------------------------
 #  Copyright (C) 2008-2011  The IPython Development Team
 #
 #  Distributed under the terms of the BSD License.  The full license is in
 #  the file COPYING, distributed as part of this software.
 #-----------------------------------------------------------------------------
 
 #-----------------------------------------------------------------------------
 # Imports
 #-----------------------------------------------------------------------------
 
 # stdlib
 import errno
 import logging
 import os
 import random
 import re
 import select
 import signal
 import socket
 import sys
 import threading
 import time
 import webbrowser
 
 # Third party
 import zmq
 
 # Install the pyzmq ioloop. This has to be done before anything else from
 # tornado is imported.
 from zmq.eventloop import ioloop
 ioloop.install()
 
 from tornado import httpserver
 from tornado import web
 
 # Our own libraries
 from .kernelmanager import MappingKernelManager
 from .handlers import (LoginHandler, LogoutHandler,
     ProjectDashboardHandler, NewHandler, NamedNotebookHandler,
     MainKernelHandler, KernelHandler, KernelActionHandler, IOPubHandler,
     ShellHandler, NotebookRootHandler, NotebookHandler, NotebookCopyHandler,
     RSTHandler, AuthenticatedFileHandler, PrintNotebookHandler,
-    MainClusterHandler, ClusterProfileHandler, ClusterActionHandler
+    MainClusterHandler, ClusterProfileHandler, ClusterActionHandler,
+    FileFindHandler,
 )
 from .notebookmanager import NotebookManager
 from .clustermanager import ClusterManager
 
 from IPython.config.application import catch_config_error, boolean_flag
 from IPython.core.application import BaseIPythonApplication
 from IPython.core.profiledir import ProfileDir
 from IPython.frontend.consoleapp import IPythonConsoleApp
 from IPython.lib.kernel import swallow_argv
 from IPython.zmq.session import Session, default_secure
 from IPython.zmq.zmqshell import ZMQInteractiveShell
 from IPython.zmq.ipkernel import (
     flags as ipkernel_flags,
     aliases as ipkernel_aliases,
     IPKernelApp
 )
 from IPython.utils.traitlets import Dict, Unicode, Integer, List, Enum, Bool
 from IPython.utils import py3compat
+from IPython.utils.path import filefind
 
 #-----------------------------------------------------------------------------
 # Module globals
 #-----------------------------------------------------------------------------
 
 _kernel_id_regex = r"(?P<kernel_id>\w+-\w+-\w+-\w+-\w+)"
 _kernel_action_regex = r"(?P<action>restart|interrupt)"
 _notebook_id_regex = r"(?P<notebook_id>\w+-\w+-\w+-\w+-\w+)"
 _profile_regex = r"(?P<profile>[^\/]+)" # there is almost no text that is invalid
 _cluster_action_regex = r"(?P<action>start|stop)"
 
 
 LOCALHOST = '127.0.0.1'
 
 _examples = """
 ipython notebook                       # start the notebook
 ipython notebook --profile=sympy       # use the sympy profile
 ipython notebook --pylab=inline        # pylab in inline plotting mode
 ipython notebook --certfile=mycert.pem # use SSL/TLS certificate
 ipython notebook --port=5555 --ip=*    # Listen on port 5555, all interfaces
 """
 
 #-----------------------------------------------------------------------------
 # Helper functions
 #-----------------------------------------------------------------------------
 
 def url_path_join(a,b):
     if a.endswith('/') and b.startswith('/'):
         return a[:-1]+b
     else:
         return a+b
 
 def random_ports(port, n):
     """Generate a list of n random ports near the given port.
 
     The first 5 ports will be sequential, and the remaining n-5 will be
     randomly selected in the range [port-2*n, port+2*n].
     """
     for i in range(min(5, n)):
         yield port + i
     for i in range(n-5):
         yield port + random.randint(-2*n, 2*n)
 
 #-----------------------------------------------------------------------------
 # The Tornado web application
 #-----------------------------------------------------------------------------
 
 class NotebookWebApplication(web.Application):
 
     def __init__(self, ipython_app, kernel_manager, notebook_manager, 
                  cluster_manager, log,
                  base_project_url, settings_overrides):
         handlers = [
             (r"/", ProjectDashboardHandler),
             (r"/login", LoginHandler),
             (r"/logout", LogoutHandler),
             (r"/new", NewHandler),
             (r"/%s" % _notebook_id_regex, NamedNotebookHandler),
             (r"/%s/copy" % _notebook_id_regex, NotebookCopyHandler),
             (r"/%s/print" % _notebook_id_regex, PrintNotebookHandler),
             (r"/kernels", MainKernelHandler),
             (r"/kernels/%s" % _kernel_id_regex, KernelHandler),
             (r"/kernels/%s/%s" % (_kernel_id_regex, _kernel_action_regex), KernelActionHandler),
             (r"/kernels/%s/iopub" % _kernel_id_regex, IOPubHandler),
             (r"/kernels/%s/shell" % _kernel_id_regex, ShellHandler),
             (r"/notebooks", NotebookRootHandler),
             (r"/notebooks/%s" % _notebook_id_regex, NotebookHandler),
             (r"/rstservice/render", RSTHandler),
             (r"/files/(.*)", AuthenticatedFileHandler, {'path' : notebook_manager.notebook_dir}),
             (r"/clusters", MainClusterHandler),
             (r"/clusters/%s/%s" % (_profile_regex, _cluster_action_regex), ClusterActionHandler),
             (r"/clusters/%s" % _profile_regex, ClusterProfileHandler),
         ]
 
         # Python < 2.6.5 doesn't accept unicode keys in f(**kwargs), and
         # base_project_url will always be unicode, which will in turn
         # make the patterns unicode, and ultimately result in unicode
         # keys in kwargs to handler._execute(**kwargs) in tornado.
         # This enforces that base_project_url be ascii in that situation.
         # 
         # Note that the URLs these patterns check against are escaped,
         # and thus guaranteed to be ASCII: 'héllo' is really 'h%C3%A9llo'.
         base_project_url = py3compat.unicode_to_str(base_project_url, 'ascii')
         
         settings = dict(
             template_path=os.path.join(os.path.dirname(__file__), "templates"),
-            static_path=os.path.join(os.path.dirname(__file__), "static"),
+            static_path=ipython_app.static_file_path,
+            static_handler_class = FileFindHandler,
             cookie_secret=os.urandom(1024),
             login_url="%s/login"%(base_project_url.rstrip('/')),
         )
 
         # allow custom overrides for the tornado web app.
         settings.update(settings_overrides)
 
         # prepend base_project_url onto the patterns that we match
         new_handlers = []
         for handler in handlers:
             pattern = url_path_join(base_project_url, handler[0])
             new_handler = tuple([pattern]+list(handler[1:]))
             new_handlers.append( new_handler )
 
         super(NotebookWebApplication, self).__init__(new_handlers, **settings)
 
         self.kernel_manager = kernel_manager
         self.notebook_manager = notebook_manager
         self.cluster_manager = cluster_manager
         self.ipython_app = ipython_app
         self.read_only = self.ipython_app.read_only
         self.log = log
 
 
 #-----------------------------------------------------------------------------
 # Aliases and Flags
 #-----------------------------------------------------------------------------
 
 flags = dict(ipkernel_flags)
 flags['no-browser']=(
     {'NotebookApp' : {'open_browser' : False}},
     "Don't open the notebook in a browser after startup."
 )
 flags['no-mathjax']=(
     {'NotebookApp' : {'enable_mathjax' : False}},
     """Disable MathJax
     
     MathJax is the javascript library IPython uses to render math/LaTeX. It is
     very large, so you may want to disable it if you have a slow internet
     connection, or for offline use of the notebook.
     
     When disabled, equations etc. will appear as their untransformed TeX source.
     """
 )
 flags['read-only'] = (
     {'NotebookApp' : {'read_only' : True}},
     """Allow read-only access to notebooks.
     
     When using a password to protect the notebook server, this flag
     allows unauthenticated clients to view the notebook list, and
     individual notebooks, but not edit them, start kernels, or run
     code.
     
     If no password is set, the server will be entirely read-only.
     """
 )
 
 # Add notebook manager flags
 flags.update(boolean_flag('script', 'NotebookManager.save_script',
                'Auto-save a .py script everytime the .ipynb notebook is saved',
                'Do not auto-save .py scripts for every notebook'))
 
 # the flags that are specific to the frontend
 # these must be scrubbed before being passed to the kernel,
 # or it will raise an error on unrecognized flags
 notebook_flags = ['no-browser', 'no-mathjax', 'read-only', 'script', 'no-script']
 
 aliases = dict(ipkernel_aliases)
 
 aliases.update({
     'ip': 'NotebookApp.ip',
     'port': 'NotebookApp.port',
     'port-retries': 'NotebookApp.port_retries',
     'keyfile': 'NotebookApp.keyfile',
     'certfile': 'NotebookApp.certfile',
     'notebook-dir': 'NotebookManager.notebook_dir',
     'browser': 'NotebookApp.browser',
 })
 
 # remove ipkernel flags that are singletons, and don't make sense in
 # multi-kernel evironment:
 aliases.pop('f', None)
 
 notebook_aliases = [u'port', u'port-retries', u'ip', u'keyfile', u'certfile',
                     u'notebook-dir']
 
 #-----------------------------------------------------------------------------
 # NotebookApp
 #-----------------------------------------------------------------------------
 
 class NotebookApp(BaseIPythonApplication):
 
     name = 'ipython-notebook'
     default_config_file_name='ipython_notebook_config.py'
     
     description = """
         The IPython HTML Notebook.
         
         This launches a Tornado based HTML Notebook Server that serves up an
         HTML5/Javascript Notebook client.
     """
     examples = _examples
     
     classes = IPythonConsoleApp.classes + [MappingKernelManager, NotebookManager]
     flags = Dict(flags)
     aliases = Dict(aliases)
 
     kernel_argv = List(Unicode)
 
     log_level = Enum((0,10,20,30,40,50,'DEBUG','INFO','WARN','ERROR','CRITICAL'),
                     default_value=logging.INFO,
                     config=True,
                     help="Set the log level by value or name.")
 
     # create requested profiles by default, if they don't exist:
     auto_create = Bool(True)
 
     # file to be opened in the notebook server
     file_to_run = Unicode('')
 
     # Network related information.
 
     ip = Unicode(LOCALHOST, config=True,
         help="The IP address the notebook server will listen on."
     )
 
     def _ip_changed(self, name, old, new):
         if new == u'*': self.ip = u''
 
     port = Integer(8888, config=True,
         help="The port the notebook server will listen on."
     )
     port_retries = Integer(50, config=True,
         help="The number of additional ports to try if the specified port is not available."
     )
 
     certfile = Unicode(u'', config=True, 
         help="""The full path to an SSL/TLS certificate file."""
     )
     
     keyfile = Unicode(u'', config=True, 
         help="""The full path to a private key file for usage with SSL/TLS."""
     )
 
     password = Unicode(u'', config=True,
                       help="""Hashed password to use for web authentication.
 
                       To generate, type in a python/IPython shell:
 
                         from IPython.lib import passwd; passwd()
 
                       The string should be of the form type:salt:hashed-password.
                       """
     )
 
     open_browser = Bool(True, config=True,
                         help="""Whether to open in a browser after starting.
                         The specific browser used is platform dependent and
                         determined by the python standard library `webbrowser`
                         module, unless it is overridden using the --browser
                         (NotebookApp.browser) configuration option.
                         """)
 
     browser = Unicode(u'', config=True,
                       help="""Specify what command to use to invoke a web
                       browser when opening the notebook. If not specified, the
                       default browser will be determined by the `webbrowser`
                       standard library module, which allows setting of the
                       BROWSER environment variable to override it.
                       """)
     
     read_only = Bool(False, config=True,
         help="Whether to prevent editing/execution of notebooks."
     )
     
     webapp_settings = Dict(config=True,
             help="Supply overrides for the tornado.web.Application that the "
                  "IPython notebook uses.")
     
     enable_mathjax = Bool(True, config=True,
         help="""Whether to enable MathJax for typesetting math/TeX
 
         MathJax is the javascript library IPython uses to render math/LaTeX. It is
         very large, so you may want to disable it if you have a slow internet
         connection, or for offline use of the notebook.
 
         When disabled, equations etc. will appear as their untransformed TeX source.
         """
     )
     def _enable_mathjax_changed(self, name, old, new):
         """set mathjax url to empty if mathjax is disabled"""
         if not new:
             self.mathjax_url = u''
 
     base_project_url = Unicode('/', config=True,
                                help='''The base URL for the notebook server''')
     base_kernel_url = Unicode('/', config=True,
                                help='''The base URL for the kernel server''')
     websocket_host = Unicode("", config=True,
         help="""The hostname for the websocket server."""
     )
+    
+    extra_static_paths = List(Unicode, config=True,
+        help="""Extra paths to search for serving static files.
+        
+        This allows adding javascript/css to be available from the notebook server machine,
+        or overriding individual files in the IPython"""
+    )
+    def _extra_static_paths_default(self):
+        return [os.path.join(self.profile_dir.location, 'static')]
+    
+    @property
+    def static_file_path(self):
+        """return extra paths + the default location"""
+        return self.extra_static_paths + [os.path.join(os.path.dirname(__file__), "static")]
 
     mathjax_url = Unicode("", config=True,
         help="""The url for MathJax.js."""
     )
     def _mathjax_url_default(self):
         if not self.enable_mathjax:
             return u''
-        static_path = self.webapp_settings.get("static_path", os.path.join(os.path.dirname(__file__), "static"))
         static_url_prefix = self.webapp_settings.get("static_url_prefix",
                                                      "/static/")
-        if os.path.exists(os.path.join(static_path, 'mathjax', "MathJax.js")):
-            self.log.info("Using local MathJax")
-            return static_url_prefix+u"mathjax/MathJax.js"
-        else:
+        try:
+            mathjax = filefind(os.path.join('mathjax', 'MathJax.js'), self.static_file_path)
+        except IOError:
             if self.certfile:
                 # HTTPS: load from Rackspace CDN, because SSL certificate requires it
                 base = u"https://c328740.ssl.cf1.rackcdn.com"
             else:
                 base = u"http://cdn.mathjax.org"
             
             url = base + u"/mathjax/latest/MathJax.js"
             self.log.info("Using MathJax from CDN: %s", url)
             return url
+        else:
+            self.log.info("Using local MathJax from %s" % mathjax)
+            return static_url_prefix+u"mathjax/MathJax.js"
     
     def _mathjax_url_changed(self, name, old, new):
         if new and not self.enable_mathjax:
             # enable_mathjax=False overrides mathjax_url
             self.mathjax_url = u''
         else:
             self.log.info("Using MathJax: %s", new)
 
     def parse_command_line(self, argv=None):
         super(NotebookApp, self).parse_command_line(argv)
         if argv is None:
             argv = sys.argv[1:]
 
         # Scrub frontend-specific flags
         self.kernel_argv = swallow_argv(argv, notebook_aliases, notebook_flags)
         # Kernel should inherit default config file from frontend
         self.kernel_argv.append("--KernelApp.parent_appname='%s'"%self.name)
 
         if self.extra_args:
             f = os.path.abspath(self.extra_args[0])
             if os.path.isdir(f):
                 nbdir = f
             else:
                 self.file_to_run = f
                 nbdir = os.path.dirname(f)
             self.config.NotebookManager.notebook_dir = nbdir
 
     def init_configurables(self):
         # force Session default to be secure
         default_secure(self.config)
         self.kernel_manager = MappingKernelManager(
             config=self.config, log=self.log, kernel_argv=self.kernel_argv,
             connection_dir = self.profile_dir.security_dir,
         )
         self.notebook_manager = NotebookManager(config=self.config, log=self.log)
         self.log.info("Serving notebooks from %s", self.notebook_manager.notebook_dir)
         self.notebook_manager.list_notebooks()
         self.cluster_manager = ClusterManager(config=self.config, log=self.log)
         self.cluster_manager.update_profiles()
 
     def init_logging(self):
         # This prevents double log messages because tornado use a root logger that
         # self.log is a child of. The logging module dipatches log messages to a log
         # and all of its ancenstors until propagate is set to False.
         self.log.propagate = False
     
     def init_webapp(self):
         """initialize tornado webapp and httpserver"""
         self.web_app = NotebookWebApplication(
             self, self.kernel_manager, self.notebook_manager, 
             self.cluster_manager, self.log,
             self.base_project_url, self.webapp_settings
         )
         if self.certfile:
             ssl_options = dict(certfile=self.certfile)
             if self.keyfile:
                 ssl_options['keyfile'] = self.keyfile
         else:
             ssl_options = None
         self.web_app.password = self.password
         self.http_server = httpserver.HTTPServer(self.web_app, ssl_options=ssl_options)
         if ssl_options is None and not self.ip and not (self.read_only and not self.password):
             self.log.critical('WARNING: the notebook server is listening on all IP addresses '
                               'but not using any encryption or authentication. This is highly '
                               'insecure and not recommended.')
 
         success = None
         for port in random_ports(self.port, self.port_retries+1):
             try:
                 self.http_server.listen(port, self.ip)
             except socket.error as e:
                 if e.errno != errno.EADDRINUSE:
                     raise
                 self.log.info('The port %i is already in use, trying another random port.' % port)
             else:
                 self.port = port
                 success = True
                 break
         if not success:
             self.log.critical('ERROR: the notebook server could not be started because '
                               'no available port could be found.')
             self.exit(1)
     
     def init_signal(self):
         # FIXME: remove this check when pyzmq dependency is >= 2.1.11
         # safely extract zmq version info:
         try:
             zmq_v = zmq.pyzmq_version_info()
         except AttributeError:
             zmq_v = [ int(n) for n in re.findall(r'\d+', zmq.__version__) ]
             if 'dev' in zmq.__version__:
                 zmq_v.append(999)
             zmq_v = tuple(zmq_v)
         if zmq_v >= (2,1,9) and not sys.platform.startswith('win'):
             # This won't work with 2.1.7 and
             # 2.1.9-10 will log ugly 'Interrupted system call' messages,
             # but it will work
             signal.signal(signal.SIGINT, self._handle_sigint)
         signal.signal(signal.SIGTERM, self._signal_stop)
     
     def _handle_sigint(self, sig, frame):
         """SIGINT handler spawns confirmation dialog"""
         # register more forceful signal handler for ^C^C case
         signal.signal(signal.SIGINT, self._signal_stop)
         # request confirmation dialog in bg thread, to avoid
         # blocking the App
         thread = threading.Thread(target=self._confirm_exit)
         thread.daemon = True
         thread.start()
     
     def _restore_sigint_handler(self):
         """callback for restoring original SIGINT handler"""
         signal.signal(signal.SIGINT, self._handle_sigint)
     
     def _confirm_exit(self):
         """confirm shutdown on ^C
         
         A second ^C, or answering 'y' within 5s will cause shutdown,
         otherwise original SIGINT handler will be restored.
         
         This doesn't work on Windows.
         """
         # FIXME: remove this delay when pyzmq dependency is >= 2.1.11
         time.sleep(0.1)
         sys.stdout.write("Shutdown Notebook Server (y/[n])? ")
         sys.stdout.flush()
         r,w,x = select.select([sys.stdin], [], [], 5)
         if r:
             line = sys.stdin.readline()
             if line.lower().startswith('y'):
                 self.log.critical("Shutdown confirmed")
                 ioloop.IOLoop.instance().stop()
                 return
         else:
             print "No answer for 5s:",
         print "resuming operation..."
         # no answer, or answer is no:
         # set it back to original SIGINT handler
         # use IOLoop.add_callback because signal.signal must be called
         # from main thread
         ioloop.IOLoop.instance().add_callback(self._restore_sigint_handler)
     
     def _signal_stop(self, sig, frame):
         self.log.critical("received signal %s, stopping", sig)
         ioloop.IOLoop.instance().stop()
     
     @catch_config_error
     def initialize(self, argv=None):
         self.init_logging()
         super(NotebookApp, self).initialize(argv)
         self.init_configurables()
         self.init_webapp()
         self.init_signal()
 
     def cleanup_kernels(self):
         """shutdown all kernels
         
         The kernels will shutdown themselves when this process no longer exists,
         but explicit shutdown allows the KernelManagers to cleanup the connection files.
         """
         self.log.info('Shutting down kernels')
         km = self.kernel_manager
         # copy list, since shutdown_kernel deletes keys
         for kid in list(km.kernel_ids):
             km.shutdown_kernel(kid)
 
     def start(self):
         ip = self.ip if self.ip else '[all ip addresses on your system]'
         proto = 'https' if self.certfile else 'http'
         info = self.log.info
         info("The IPython Notebook is running at: %s://%s:%i%s" %
              (proto, ip, self.port,self.base_project_url) )
         info("Use Control-C to stop this server and shut down all kernels.")
 
         if self.open_browser or self.file_to_run:
             ip = self.ip or '127.0.0.1'
             try:
                 browser = webbrowser.get(self.browser or None)
             except webbrowser.Error as e:
                 self.log.warn('No web browser found: %s.' % e)
                 browser = None
 
             if self.file_to_run:
                 filename, _ = os.path.splitext(os.path.basename(self.file_to_run))
                 for nb in self.notebook_manager.list_notebooks():
                     if filename == nb['name']:
                         url = nb['notebook_id']
                         break
                 else:
                     url = ''
             else:
                 url = ''
             if browser:
                 b = lambda : browser.open("%s://%s:%i%s%s" % (proto, ip,
                     self.port, self.base_project_url, url), new=2)
                 threading.Thread(target=b).start()
         try:
             ioloop.IOLoop.instance().start()
         except KeyboardInterrupt:
             info("Interrupted...")
         finally:
             self.cleanup_kernels()
     
 
 #-----------------------------------------------------------------------------
 # Main entry point
 #-----------------------------------------------------------------------------
 
 def launch_new_instance():
     app = NotebookApp.instance()
     app.initialize()
     app.start()
 

IPython/frontend/html/notebook/templates/notebook.html

@@ -1,250 +1,250
 {% extends page.html %}
 {% block stylesheet %}
 
 {% if mathjax_url %}
 <script type="text/javascript" src="{{mathjax_url}}?config=TeX-AMS_HTML" charset="utf-8"></script>
 {% end %}
 <script type="text/javascript">
 // MathJax disabled, set as null to distingish from *missing* MathJax,
 // where it will be undefined, and should prompt a dialog later.
 window.mathjax_url = "{{mathjax_url}}";
 </script>
 
 <link rel="stylesheet" href="{{ static_url("codemirror/lib/codemirror.css") }}">
 <link rel="stylesheet" href="{{ static_url("codemirror/theme/ipython.css") }}">
 
 <link rel="stylesheet" href="{{ static_url("prettify/prettify.css") }}"/>
 
 <link rel="stylesheet" href="{{ static_url("css/notebook.css") }}" type="text/css" />
 <link rel="stylesheet" href="{{ static_url("css/tooltip.css") }}" type="text/css" />
 <link rel="stylesheet" href="{{ static_url("css/renderedhtml.css") }}" type="text/css" />
 
 <link rel="stylesheet" href="{{ static_url("css/printnotebook.css") }}" type="text/css" media="print"/>
 
 {% end %}
 
 
 {% block params %}
 
 data-project={{project}}
 data-base-project-url={{base_project_url}}
 data-base-kernel-url={{base_kernel_url}}
 data-read-only={{read_only and not logged_in}}
 data-notebook-id={{notebook_id}}
 
 {% end %}
 
 
 {% block header %}
 
 <span id="save_widget">
     <span id="notebook_name"></span>
     <span id="save_status"></span>
 </span>
 
 {% end %}
 
 
 {% block site %}
 
 <div id="menubar_container">
 <div id="menubar">
     <ul id="menus">
         <li><a href="#">File</a>
             <ul>
                 <li id="new_notebook"><a href="#">New</a></li>
                 <li id="open_notebook"><a href="#">Open...</a></li>
                 <hr/>
                 <li id="copy_notebook"><a href="#">Make a Copy...</a></li>
                 <li id="rename_notebook"><a href="#">Rename...</a></li>
                 <li id="save_notebook"><a href="#">Save</a></li>
                 <hr/>
                 <li><a href="#">Download as</a>
                     <ul>
                         <li id="download_ipynb"><a href="#">IPython (.ipynb)</a></li>
                         <li id="download_py"><a href="#">Python (.py)</a></li>
                     </ul>
                 </li>
                 <hr/>
                 <li id="print_notebook"><a href="/{{notebook_id}}/print" target="_blank">Print View</a></li>
                 <hr/>
                 <li id="kill_and_exit"><a href="#" >Close and halt</a></li>
             </ul>
         </li>
         <li><a href="#">Edit</a>
             <ul>
                 <li id="cut_cell"><a href="#">Cut Cell</a></li>
                 <li id="copy_cell"><a href="#">Copy Cell</a></li>
                 <li id="paste_cell" class="ui-state-disabled"><a href="#">Paste Cell</a></li>
                 <li id="paste_cell_above" class="ui-state-disabled"><a href="#">Paste Cell Above</a></li>
                 <li id="paste_cell_below" class="ui-state-disabled"><a href="#">Paste Cell Below</a></li>
                 <li id="delete_cell"><a href="#">Delete</a></li>
                 <hr/>
                 <li id="split_cell"><a href="#">Split Cell</a></li>
                 <li id="merge_cell_above"><a href="#">Merge Cell Above</a></li>
                 <li id="merge_cell_below"><a href="#">Merge Cell Below</a></li>
                 <hr/>
                 <li id="move_cell_up"><a href="#">Move Cell Up</a></li>
                 <li id="move_cell_down"><a href="#">Move Cell Down</a></li>
                 <hr/>
                 <li id="select_previous"><a href="#">Select Previous Cell</a></li>
                 <li id="select_next"><a href="#">Select Next Cell</a></li>
             </ul>
         </li>
         <li><a href="#">View</a>
             <ul>
                 <li id="toggle_header"><a href="#">Toggle Header</a></li>
                 <li id="toggle_toolbar"><a href="#">Toggle Toolbar</a></li>
             </ul>
         </li>
         <li><a href="#">Insert</a>
             <ul>
                 <li id="insert_cell_above"><a href="#">Insert Cell Above</a></li>
                 <li id="insert_cell_below"><a href="#">Insert Cell Below</a></li>
             </ul>
         </li>
         <li><a href="#">Cell</a>
             <ul>
                 <li id="run_cell"><a href="#">Run</a></li>
                 <li id="run_cell_in_place"><a href="#">Run in Place</a></li>
                 <li id="run_all_cells"><a href="#">Run All</a></li>
                 <hr/>
                 <li id="to_code"><a href="#">Code</a></li>
                 <li id="to_markdown"><a href="#">Markdown </a></li>
                 <li id="to_raw"><a href="#">Raw Text</a></li>
                 <li id="to_heading1"><a href="#">Heading 1</a></li>
                 <li id="to_heading2"><a href="#">Heading 2</a></li>
                 <li id="to_heading3"><a href="#">Heading 3</a></li>
                 <li id="to_heading4"><a href="#">Heading 4</a></li>
                 <li id="to_heading5"><a href="#">Heading 5</a></li>
                 <li id="to_heading6"><a href="#">Heading 6</a></li>
                 <hr/>
                 <li id="toggle_output"><a href="#">Toggle Current Output</a></li>
                 <li id="all_outputs"><a href="#">All Output</a>
                     <ul>
                         <li id="expand_all_output"><a href="#">Expand</a></li>
                         <li id="scroll_all_output"><a href="#">Scroll Long</a></li>
                         <li id="collapse_all_output"><a href="#">Collapse</a></li>
                         <li id="clear_all_output"><a href="#">Clear</a></li>
                     </ul>
                 </li>
             </ul>
         </li>
         <li><a href="#">Kernel</a>
             <ul>
                 <li id="int_kernel"><a href="#">Interrupt</a></li>
                 <li id="restart_kernel"><a href="#">Restart</a></li>
             </ul>
         </li>
         <li><a href="#">Help</a>
             <ul>
                 <li><a href="http://ipython.org/documentation.html" target="_blank">IPython Help</a></li>
                 <li><a href="http://ipython.org/ipython-doc/stable/interactive/htmlnotebook.html" target="_blank">Notebook Help</a></li>
                 <li id="keyboard_shortcuts"><a href="#">Keyboard Shortcuts</a></li>
                 <hr/>
                 <li><a href="http://docs.python.org" target="_blank">Python</a></li>
                 <li><a href="http://docs.scipy.org/doc/numpy/reference/" target="_blank">NumPy</a></li>
                 <li><a href="http://docs.scipy.org/doc/scipy/reference/" target="_blank">SciPy</a></li>
                 <li><a href="http://docs.sympy.org/dev/index.html" target="_blank">SymPy</a></li>
                 <li><a href="http://matplotlib.sourceforge.net/" target="_blank">Matplotlib</a></li>
             </ul>
         </li>
     </ul>
 
 </div>
 <div id="notification"></div>
 </div>
 
 
 <div id="toolbar">
 
     <span>
         <button id="save_b">Save</button>
     </span>
     <span id="cut_copy_paste">
         <button id="cut_b" title="Cut Cell">Cut Cell</button>
         <button id="copy_b" title="Copy Cell">Copy Cell</button>
         <button id="paste_b" title="Paste Cell">Paste Cell</button>
     </span>
     <span id="move_up_down">
         <button id="move_up_b" title="Move Cell Up">Move Cell Up</button>
         <button id="move_down_b" title="Move Cell Down">Move Down</button>
     </span>
     <span id="insert_above_below">
         <button id="insert_above_b" title="Insert Cell Above">Insert Cell Above</button>
         <button id="insert_below_b" title="Insert Cell Below">Insert Cell Below</button>
     </span>
     <span id="run_int">
         <button id="run_b" title="Run Cell">Run Cell</button>
         <button id="interrupt_b" title="Interrupt">Interrupt</button>
     </span>
     <span>
         <select id="cell_type">
              <option value="code">Code</option>
              <option value="markdown">Markdown</option>
              <option value="raw">Raw Text</option>
              <option value="heading1">Heading 1</option>
              <option value="heading2">Heading 2</option>
              <option value="heading3">Heading 3</option>
              <option value="heading4">Heading 4</option>
              <option value="heading5">Heading 5</option>
              <option value="heading6">Heading 6</option>
         </select>
     </span>
 
 </div>
 
 <div id="main_app">
 
     <div id="notebook_panel">
         <div id="notebook"></div>
         <div id="pager_splitter"></div>
         <div id="pager"></div>
     </div>
 
 </div>
 <div id='tooltip' class='tooltip ui-corner-all' style='display:none'></div>
 
 
 {% end %}
 
 
 {% block script %}
 
 <script src="{{ static_url("codemirror/lib/codemirror.js") }}" charset="utf-8"></script>
 <script src="{{ static_url("codemirror/mode/python/python.js") }}" charset="utf-8"></script>
 <script src="{{ static_url("codemirror/mode/htmlmixed/htmlmixed.js") }}" charset="utf-8"></script>
 <script src="{{ static_url("codemirror/mode/xml/xml.js") }}" charset="utf-8"></script>
 <script src="{{ static_url("codemirror/mode/javascript/javascript.js") }}" charset="utf-8"></script>
 <script src="{{ static_url("codemirror/mode/css/css.js") }}" charset="utf-8"></script>
 <script src="{{ static_url("codemirror/mode/rst/rst.js") }}" charset="utf-8"></script>
 <script src="{{ static_url("codemirror/mode/markdown/markdown.js") }}" charset="utf-8"></script>
 
 <script src="{{ static_url("pagedown/Markdown.Converter.js") }}" charset="utf-8"></script>
 
 <script src="{{ static_url("prettify/prettify.js") }}" charset="utf-8"></script>
 <script src="{{ static_url("dateformat/date.format.js") }}" charset="utf-8"></script>
 
 <script src="{{ static_url("js/events.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/utils.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/layoutmanager.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/initmathjax.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/outputarea.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/cell.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/codecell.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/completer.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/textcell.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/kernel.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/savewidget.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/quickhelp.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/pager.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/menubar.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/toolbar.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/notebook.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/notificationwidget.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/tooltip.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{ static_url("js/notebookmain.js") }}" type="text/javascript" charset="utf-8"></script>
 
-<script src="{{ static_url("js/contexthint.js") }} charset="utf-8"></script>
+<script src="{{ static_url("js/contexthint.js") }}" charset="utf-8"></script>
 
 {% end %}

IPython/frontend/html/notebook/templates/page.html

@@ -1,58 +1,62
 <!DOCTYPE HTML>
 <html>
 
 <head>
     <meta charset="utf-8">
 
     <title>{% block title %}IPython Notebook{% end %}</title>
 
     <link rel="stylesheet" href="{{static_url("jquery/css/themes/base/jquery-ui.min.css") }}" type="text/css" />
     <link rel="stylesheet" href="{{static_url("css/boilerplate.css") }}" type="text/css" />
     <link rel="stylesheet" href="{{static_url("css/fbm.css") }}" type="text/css" />
     <link rel="stylesheet" href="{{static_url("css/page.css") }}" type="text/css"/>
     {% block stylesheet %}
     {% end %}
+    <link rel="stylesheet" href="{{ static_url("css/custom.css") }}" type="text/css" />
+
 
     {% block meta %}
     {% end %}
 
 </head>
 
 <body {% block params %}{% end %}>
 
 <div id="header">
     <span id="ipython_notebook"><h1><a href={{base_project_url}} alt='dashboard'><img src='{{static_url("ipynblogo.png") }}' alt='IPython Notebook'/></a></h1></span>
 
     {% block login_widget %}
 
       <span id="login_widget">
         {% if logged_in %}
           <button id="logout">Logout</button>
         {% elif login_available and not logged_in %}
           <button id="login">Login</button>
         {% end %}
       </span>
 
     {% end %}
 
     {% block header %}
     {% end %}
 </div>
 
 <div id="site">
 {% block site %}
 {% end %}
 </div>
 
 <script src="{{static_url("jquery/js/jquery-1.7.1.min.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{static_url("jquery/js/jquery-ui.min.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{static_url("js/namespace.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{static_url("js/page.js") }}" type="text/javascript" charset="utf-8"></script>
 <script src="{{static_url("js/loginwidget.js") }}" type="text/javascript" charset="utf-8"></script>
 
 {% block script %}
 {% end %}
 
+<script src="{{static_url("js/custom.js") }}" type="text/javascript" charset="utf-8"></script>
+
 </body>
 
 </html>