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@@ -12,7 +12,7 b' developers of third party tools and libraries that use IPython should see the' | |||||
12 | For instructions on how to make a developer install see :ref:`devinstall`. |
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12 | For instructions on how to make a developer install see :ref:`devinstall`. | |
13 |
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13 | |||
14 | Backporting Pull requests |
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14 | Backporting Pull requests | |
15 | ------------------------- |
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15 | ========================= | |
16 |
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16 | |||
17 | All pull requests should usually be made against ``master``, if a Pull Request |
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17 | All pull requests should usually be made against ``master``, if a Pull Request | |
18 | need to be backported to an earlier release; then it should be tagged with the |
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18 | need to be backported to an earlier release; then it should be tagged with the | |
@@ -67,7 +67,6 b' to automatically list and apply the PR on other branches. For example:' | |||||
67 |
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67 | |||
68 | .. _release_process: |
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68 | .. _release_process: | |
69 |
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69 | |||
70 | ======================= |
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71 | IPython release process |
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70 | IPython release process | |
72 | ======================= |
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71 | ======================= | |
73 |
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72 |
@@ -19,4 +19,3 b" Developer's guide for third party tools and libraries" | |||||
19 | lexer |
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19 | lexer | |
20 | config |
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20 | config | |
21 | inputhook_app |
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21 | inputhook_app | |
22 | ipython_directive |
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@@ -1,6 +1,473 b'' | |||||
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1 | ||||
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2 | .. _ipython_directive: | |||
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3 | ||||
1 | ======================== |
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4 | ======================== | |
2 |
IPython Sphinx |
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5 | IPython Sphinx Directive | |
3 | ======================== |
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6 | ======================== | |
4 |
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7 | |||
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8 | .. note:: | |||
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9 | ||||
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10 | The IPython Sphinx Directive is in 'beta' and currently under | |||
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11 | active development. Improvements to the code or documentation are welcome! | |||
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12 | ||||
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13 | The ipython directive is a stateful ipython shell for embedding in | |||
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14 | sphinx documents. It knows about standard ipython prompts, and | |||
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15 | extracts the input and output lines. These prompts will be renumbered | |||
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16 | starting at ``1``. The inputs will be fed to an embedded ipython | |||
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17 | interpreter and the outputs from that interpreter will be inserted as | |||
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18 | well. For example, code blocks like the following:: | |||
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19 | ||||
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20 | .. ipython:: | |||
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21 | ||||
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22 | In [136]: x = 2 | |||
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23 | ||||
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24 | In [137]: x**3 | |||
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25 | Out[137]: 8 | |||
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26 | ||||
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27 | will be rendered as | |||
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28 | ||||
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29 | .. ipython:: | |||
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30 | ||||
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31 | In [136]: x = 2 | |||
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32 | ||||
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33 | In [137]: x**3 | |||
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34 | Out[137]: 8 | |||
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35 | ||||
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36 | .. note:: | |||
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37 | ||||
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38 | This tutorial should be read side-by-side with the Sphinx source | |||
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39 | for this document because otherwise you will see only the rendered | |||
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40 | output and not the code that generated it. Excepting the example | |||
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41 | above, we will not in general be showing the literal ReST in this | |||
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42 | document that generates the rendered output. | |||
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43 | ||||
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44 | ||||
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45 | Persisting the Python session across IPython directive blocks | |||
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46 | ============================================================= | |||
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47 | ||||
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48 | The state from previous sessions is stored, and standard error is | |||
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49 | trapped. At doc build time, ipython's output and std err will be | |||
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50 | inserted, and prompts will be renumbered. So the prompt below should | |||
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51 | be renumbered in the rendered docs, and pick up where the block above | |||
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52 | left off. | |||
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53 | ||||
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54 | .. ipython:: | |||
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55 | :verbatim: | |||
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56 | ||||
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57 | In [138]: z = x*3 # x is recalled from previous block | |||
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58 | ||||
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59 | In [139]: z | |||
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60 | Out[139]: 6 | |||
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61 | ||||
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62 | In [142]: print(z) | |||
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63 | 6 | |||
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64 | ||||
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65 | In [141]: q = z[) # this is a syntax error -- we trap ipy exceptions | |||
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66 | ------------------------------------------------------------ | |||
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67 | File "<ipython console>", line 1 | |||
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68 | q = z[) # this is a syntax error -- we trap ipy exceptions | |||
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69 | ^ | |||
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70 | SyntaxError: invalid syntax | |||
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71 | ||||
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72 | ||||
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73 | Adding documentation tests to your IPython directive | |||
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74 | ==================================================== | |||
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75 | ||||
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76 | The embedded interpreter supports some limited markup. For example, | |||
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77 | you can put comments in your ipython sessions, which are reported | |||
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78 | verbatim. There are some handy "pseudo-decorators" that let you | |||
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79 | doctest the output. The inputs are fed to an embedded ipython | |||
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80 | session and the outputs from the ipython session are inserted into | |||
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81 | your doc. If the output in your doc and in the ipython session don't | |||
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82 | match on a doctest assertion, an error will occur. | |||
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83 | ||||
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84 | ||||
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85 | .. ipython:: | |||
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86 | ||||
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87 | In [1]: x = 'hello world' | |||
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88 | ||||
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89 | # this will raise an error if the ipython output is different | |||
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90 | @doctest | |||
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91 | In [2]: x.upper() | |||
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92 | Out[2]: 'HELLO WORLD' | |||
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93 | ||||
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94 | # some readline features cannot be supported, so we allow | |||
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95 | # "verbatim" blocks, which are dumped in verbatim except prompts | |||
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96 | # are continuously numbered | |||
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97 | @verbatim | |||
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98 | In [3]: x.st<TAB> | |||
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99 | x.startswith x.strip | |||
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100 | ||||
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101 | For more information on @doctest decorator, please refer to the end of this page in Pseudo-Decorators section. | |||
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102 | ||||
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103 | Multi-line input | |||
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104 | ================ | |||
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105 | ||||
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106 | Multi-line input is supported. | |||
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107 | ||||
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108 | .. ipython:: | |||
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109 | :verbatim: | |||
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110 | ||||
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111 | In [130]: url = 'http://ichart.finance.yahoo.com/table.csv?s=CROX\ | |||
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112 | .....: &d=9&e=22&f=2009&g=d&a=1&br=8&c=2006&ignore=.csv' | |||
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113 | ||||
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114 | In [131]: print(url.split('&')) | |||
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115 | ['http://ichart.finance.yahoo.com/table.csv?s=CROX', 'd=9', 'e=22', | |||
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116 | ||||
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117 | Testing directive outputs | |||
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118 | ========================= | |||
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119 | ||||
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120 | The IPython Sphinx Directive makes it possible to test the outputs that you provide with your code. To do this, | |||
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121 | decorate the contents in your directive block with one of the following: | |||
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122 | ||||
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123 | * list directives here | |||
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124 | ||||
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125 | If an IPython doctest decorator is found, it will take these steps when your documentation is built: | |||
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126 | ||||
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127 | 1. Run the *input* lines in your IPython directive block against the current Python kernel (remember that the session | |||
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128 | persists across IPython directive blocks); | |||
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129 | ||||
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130 | 2. Compare the *output* of this with the output text that you've put in the IPython directive block 9what comes | |||
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131 | after `Out[NN]`); | |||
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132 | ||||
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133 | 3. If there is a difference, the directive will raise an error and your documentation build will fial. | |||
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134 | ||||
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135 | You can do doctesting on multi-line output as well. Just be careful | |||
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136 | when using non-deterministic inputs like random numbers in the ipython | |||
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137 | directive, because your inputs are run through a live interpreter, so | |||
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138 | if you are doctesting random output you will get an error. Here we | |||
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139 | "seed" the random number generator for deterministic output, and we | |||
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140 | suppress the seed line so it doesn't show up in the rendered output | |||
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141 | ||||
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142 | .. ipython:: | |||
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143 | ||||
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144 | In [133]: import numpy.random | |||
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145 | ||||
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146 | @suppress | |||
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147 | In [134]: numpy.random.seed(2358) | |||
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148 | ||||
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149 | @doctest | |||
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150 | In [135]: numpy.random.rand(10,2) | |||
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151 | Out[135]: | |||
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152 | array([[0.64524308, 0.59943846], | |||
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153 | [0.47102322, 0.8715456 ], | |||
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154 | [0.29370834, 0.74776844], | |||
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155 | [0.99539577, 0.1313423 ], | |||
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156 | [0.16250302, 0.21103583], | |||
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157 | [0.81626524, 0.1312433 ], | |||
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158 | [0.67338089, 0.72302393], | |||
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159 | [0.7566368 , 0.07033696], | |||
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160 | [0.22591016, 0.77731835], | |||
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161 | [0.0072729 , 0.34273127]]) | |||
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162 | ||||
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163 | For more information on @supress and @doctest decorators, please refer to the end of this file in | |||
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164 | Pseudo-Decorators section. | |||
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165 | ||||
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166 | Another demonstration of multi-line input and output | |||
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167 | ||||
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168 | .. ipython:: | |||
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169 | :verbatim: | |||
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170 | ||||
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171 | In [106]: print(x) | |||
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172 | jdh | |||
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173 | ||||
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174 | In [109]: for i in range(10): | |||
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175 | .....: print(i) | |||
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176 | .....: | |||
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177 | .....: | |||
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178 | 0 | |||
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179 | 1 | |||
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180 | 2 | |||
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181 | 3 | |||
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182 | 4 | |||
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183 | 5 | |||
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184 | 6 | |||
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185 | 7 | |||
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186 | 8 | |||
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187 | 9 | |||
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188 | ||||
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189 | ||||
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190 | Most of the "pseudo-decorators" can be used an options to ipython | |||
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191 | mode. For example, to setup matplotlib pylab but suppress the output, | |||
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192 | you can do. When using the matplotlib ``use`` directive, it should | |||
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193 | occur before any import of pylab. This will not show up in the | |||
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194 | rendered docs, but the commands will be executed in the embedded | |||
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195 | interpreter and subsequent line numbers will be incremented to reflect | |||
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196 | the inputs:: | |||
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197 | ||||
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198 | ||||
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199 | .. ipython:: | |||
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200 | :suppress: | |||
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201 | ||||
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202 | In [144]: from matplotlib.pylab import * | |||
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203 | ||||
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204 | In [145]: ion() | |||
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205 | ||||
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206 | .. ipython:: | |||
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207 | :suppress: | |||
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208 | ||||
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209 | In [144]: from matplotlib.pylab import * | |||
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210 | ||||
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211 | In [145]: ion() | |||
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212 | ||||
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213 | Likewise, you can set ``:doctest:`` or ``:verbatim:`` to apply these | |||
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214 | settings to the entire block. For example, | |||
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215 | ||||
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216 | .. ipython:: | |||
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217 | :verbatim: | |||
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218 | ||||
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219 | In [9]: cd mpl/examples/ | |||
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220 | /home/jdhunter/mpl/examples | |||
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221 | ||||
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222 | In [10]: pwd | |||
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223 | Out[10]: '/home/jdhunter/mpl/examples' | |||
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224 | ||||
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225 | ||||
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226 | In [14]: cd mpl/examples/<TAB> | |||
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227 | mpl/examples/animation/ mpl/examples/misc/ | |||
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228 | mpl/examples/api/ mpl/examples/mplot3d/ | |||
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229 | mpl/examples/axes_grid/ mpl/examples/pylab_examples/ | |||
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230 | mpl/examples/event_handling/ mpl/examples/widgets | |||
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231 | ||||
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232 | In [14]: cd mpl/examples/widgets/ | |||
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233 | /home/msierig/mpl/examples/widgets | |||
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234 | ||||
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235 | In [15]: !wc * | |||
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236 | 2 12 77 README.txt | |||
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237 | 40 97 884 buttons.py | |||
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238 | 26 90 712 check_buttons.py | |||
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239 | 19 52 416 cursor.py | |||
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240 | 180 404 4882 menu.py | |||
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241 | 16 45 337 multicursor.py | |||
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242 | 36 106 916 radio_buttons.py | |||
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243 | 48 226 2082 rectangle_selector.py | |||
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244 | 43 118 1063 slider_demo.py | |||
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245 | 40 124 1088 span_selector.py | |||
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246 | 450 1274 12457 total | |||
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247 | ||||
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248 | You can create one or more pyplot plots and insert them with the | |||
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249 | ``@savefig`` decorator. | |||
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250 | ||||
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251 | For more information on @savefig decorator, please refer to the end of this page in Pseudo-Decorators section. | |||
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252 | ||||
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253 | .. ipython:: | |||
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254 | ||||
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255 | @savefig plot_simple.png width=4in | |||
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256 | In [151]: plot([1,2,3]); | |||
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257 | ||||
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258 | # use a semicolon to suppress the output | |||
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259 | @savefig hist_simple.png width=4in | |||
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260 | In [151]: hist(np.random.randn(10000), 100); | |||
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261 | ||||
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262 | In a subsequent session, we can update the current figure with some | |||
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263 | text, and then resave | |||
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264 | ||||
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265 | .. ipython:: | |||
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266 | ||||
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267 | ||||
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268 | In [151]: ylabel('number') | |||
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269 | ||||
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270 | In [152]: title('normal distribution') | |||
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271 | ||||
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272 | @savefig hist_with_text.png width=4in | |||
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273 | In [153]: grid(True) | |||
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274 | ||||
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275 | You can also have function definitions included in the source. | |||
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276 | ||||
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277 | .. ipython:: | |||
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278 | ||||
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279 | In [3]: def square(x): | |||
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280 | ...: """ | |||
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281 | ...: An overcomplicated square function as an example. | |||
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282 | ...: """ | |||
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283 | ...: if x < 0: | |||
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284 | ...: x = abs(x) | |||
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285 | ...: y = x * x | |||
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286 | ...: return y | |||
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287 | ...: | |||
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288 | ||||
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289 | Then call it from a subsequent section. | |||
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290 | ||||
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291 | .. ipython:: | |||
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292 | ||||
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293 | In [4]: square(3) | |||
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294 | Out [4]: 9 | |||
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295 | ||||
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296 | In [5]: square(-2) | |||
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297 | Out [5]: 4 | |||
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298 | ||||
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299 | ||||
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300 | Writing Pure Python Code | |||
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301 | ------------------------ | |||
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302 | ||||
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303 | Pure python code is supported by the optional argument `python`. In this pure | |||
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304 | python syntax you do not include the output from the python interpreter. The | |||
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305 | following markup:: | |||
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306 | ||||
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307 | .. ipython:: python | |||
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308 | ||||
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309 | foo = 'bar' | |||
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310 | print(foo) | |||
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311 | foo = 2 | |||
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312 | foo**2 | |||
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313 | ||||
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314 | Renders as | |||
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315 | ||||
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316 | .. ipython:: python | |||
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317 | ||||
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318 | foo = 'bar' | |||
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319 | print(foo) | |||
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320 | foo = 2 | |||
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321 | foo**2 | |||
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322 | ||||
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323 | We can even plot from python, using the savefig decorator, as well as, suppress | |||
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324 | output with a semicolon | |||
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325 | ||||
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326 | .. ipython:: python | |||
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327 | ||||
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328 | @savefig plot_simple_python.png width=4in | |||
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329 | plot([1,2,3]); | |||
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330 | ||||
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331 | For more information on @savefig decorator, please refer to the end of this page in Pseudo-Decorators section. | |||
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332 | ||||
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333 | Similarly, std err is inserted | |||
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334 | ||||
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335 | .. ipython:: python | |||
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336 | :okexcept: | |||
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337 | ||||
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338 | foo = 'bar' | |||
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339 | foo[) | |||
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340 | ||||
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341 | Handling Comments | |||
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342 | ================== | |||
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343 | ||||
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344 | Comments are handled and state is preserved | |||
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345 | ||||
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346 | .. ipython:: python | |||
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347 | ||||
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348 | # comments are handled | |||
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349 | print(foo) | |||
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350 | ||||
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351 | If you don't see the next code block then the options work. | |||
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352 | ||||
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353 | .. ipython:: python | |||
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354 | :suppress: | |||
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355 | ||||
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356 | ioff() | |||
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357 | ion() | |||
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358 | ||||
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359 | Splitting Python statements across lines | |||
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360 | ======================================== | |||
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361 | ||||
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362 | Multi-line input is handled. | |||
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363 | ||||
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364 | .. ipython:: python | |||
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365 | ||||
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366 | line = 'Multi\ | |||
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367 | line &\ | |||
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368 | support &\ | |||
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369 | works' | |||
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370 | print(line.split('&')) | |||
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371 | ||||
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372 | Functions definitions are correctly parsed | |||
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373 | ||||
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374 | .. ipython:: python | |||
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375 | ||||
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376 | def square(x): | |||
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377 | """ | |||
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378 | An overcomplicated square function as an example. | |||
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379 | """ | |||
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380 | if x < 0: | |||
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381 | x = abs(x) | |||
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382 | y = x * x | |||
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383 | return y | |||
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384 | ||||
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385 | And persist across sessions | |||
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386 | ||||
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387 | .. ipython:: python | |||
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388 | ||||
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389 | print(square(3)) | |||
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390 | print(square(-2)) | |||
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391 | ||||
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392 | Pretty much anything you can do with the ipython code, you can do with | |||
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393 | with a simple python script. Obviously, though it doesn't make sense | |||
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394 | to use the doctest option. | |||
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395 | ||||
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396 | Pseudo-Decorators | |||
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397 | ================= | |||
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398 | ||||
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399 | Here are the supported decorators, and any optional arguments they | |||
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400 | take. Some of the decorators can be used as options to the entire | |||
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401 | block (eg ``verbatim`` and ``suppress``), and some only apply to the | |||
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402 | line just below them (eg ``savefig``). | |||
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403 | ||||
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404 | @suppress | |||
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405 | ||||
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406 | execute the ipython input block, but suppress the input and output | |||
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407 | block from the rendered output. Also, can be applied to the entire | |||
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408 | ``.. ipython`` block as a directive option with ``:suppress:``. | |||
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409 | ||||
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410 | @verbatim | |||
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411 | ||||
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412 | insert the input and output block in verbatim, but auto-increment | |||
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413 | the line numbers. Internally, the interpreter will be fed an empty | |||
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414 | string, so it is a no-op that keeps line numbering consistent. | |||
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415 | Also, can be applied to the entire ``.. ipython`` block as a | |||
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416 | directive option with ``:verbatim:``. | |||
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417 | ||||
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418 | @savefig OUTFILE [IMAGE_OPTIONS] | |||
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419 | ||||
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420 | save the figure to the static directory and insert it into the | |||
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421 | document, possibly binding it into a minipage and/or putting | |||
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422 | code/figure label/references to associate the code and the | |||
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423 | figure. Takes args to pass to the image directive (*scale*, | |||
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424 | *width*, etc can be kwargs); see `image options | |||
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425 | <http://docutils.sourceforge.net/docs/ref/rst/directives.html#image>`_ | |||
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426 | for details. | |||
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427 | ||||
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428 | @doctest | |||
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429 | ||||
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430 | Compare the pasted in output in the ipython block with the output | |||
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431 | generated at doc build time, and raise errors if they don't | |||
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432 | match. Also, can be applied to the entire ``.. ipython`` block as a | |||
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433 | directive option with ``:doctest:``. | |||
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434 | ||||
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435 | Configuration Options | |||
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436 | ===================== | |||
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437 | ||||
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438 | ipython_savefig_dir | |||
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439 | ||||
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440 | The directory in which to save the figures. This is relative to the | |||
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441 | Sphinx source directory. The default is `html_static_path`. | |||
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442 | ||||
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443 | ipython_rgxin | |||
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444 | ||||
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445 | The compiled regular expression to denote the start of IPython input | |||
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446 | lines. The default is `re.compile('In \[(\d+)\]:\s?(.*)\s*')`. You | |||
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447 | shouldn't need to change this. | |||
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448 | ||||
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449 | ipython_rgxout | |||
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450 | ||||
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451 | The compiled regular expression to denote the start of IPython output | |||
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452 | lines. The default is `re.compile('Out\[(\d+)\]:\s?(.*)\s*')`. You | |||
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453 | shouldn't need to change this. | |||
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454 | ||||
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455 | ||||
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456 | ipython_promptin | |||
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457 | ||||
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458 | The string to represent the IPython input prompt in the generated ReST. | |||
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459 | The default is `'In [%d]:'`. This expects that the line numbers are used | |||
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460 | in the prompt. | |||
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461 | ||||
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462 | ipython_promptout | |||
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463 | ||||
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464 | The string to represent the IPython prompt in the generated ReST. The | |||
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465 | default is `'Out [%d]:'`. This expects that the line numbers are used | |||
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466 | in the prompt. | |||
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467 | ||||
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468 | ||||
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469 | Automatically generated documentation | |||
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470 | ===================================== | |||
5 |
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471 | |||
6 | .. automodule:: IPython.sphinxext.ipython_directive |
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472 | .. automodule:: IPython.sphinxext.ipython_directive | |
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473 |
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