Merge pull request #6962 from takluyver/nb-dir-and-file-to-run

Allow starting the server with both file_to_run and notebook_dir

IPython/html/notebookapp.py

@@ -1,993 +1,994 b''
 # coding: utf-8
 """A tornado based IPython notebook server."""
 
 # Copyright (c) IPython Development Team.
 # Distributed under the terms of the Modified BSD License.
 
 from __future__ import print_function
 
 import base64
 import errno
 import io
 import json
 import logging
 import os
 import random
 import re
 import select
 import signal
 import socket
 import sys
 import threading
 import time
 import webbrowser
 
 
 # check for pyzmq 2.1.11
 from IPython.utils.zmqrelated import check_for_zmq
 check_for_zmq('2.1.11', 'IPython.html')
 
 from jinja2 import Environment, FileSystemLoader
 
 # Install the pyzmq ioloop. This has to be done before anything else from
 # tornado is imported.
 from zmq.eventloop import ioloop
 ioloop.install()
 
 # check for tornado 3.1.0
 msg = "The IPython Notebook requires tornado >= 4.0"
 try:
     import tornado
 except ImportError:
     raise ImportError(msg)
 try:
     version_info = tornado.version_info
 except AttributeError:
     raise ImportError(msg + ", but you have < 1.1.0")
 if version_info < (4,0):
     raise ImportError(msg + ", but you have %s" % tornado.version)
 
 from tornado import httpserver
 from tornado import web
 from tornado.log import LogFormatter, app_log, access_log, gen_log
 
 from IPython.html import (
     DEFAULT_STATIC_FILES_PATH,
     DEFAULT_TEMPLATE_PATH_LIST,
 )
 from .base.handlers import Template404
 from .log import log_request
 from .services.kernels.kernelmanager import MappingKernelManager
 from .services.contents.manager import ContentsManager
 from .services.contents.filemanager import FileContentsManager
 from .services.clusters.clustermanager import ClusterManager
 from .services.sessions.sessionmanager import SessionManager
 
 from .base.handlers import AuthenticatedFileHandler, FileFindHandler
 
 from IPython.config import Config
 from IPython.config.application import catch_config_error, boolean_flag
 from IPython.core.application import (
     BaseIPythonApplication, base_flags, base_aliases,
 )
 from IPython.core.profiledir import ProfileDir
 from IPython.kernel import KernelManager
 from IPython.kernel.kernelspec import KernelSpecManager
 from IPython.kernel.zmq.session import default_secure, Session
 from IPython.nbformat.sign import NotebookNotary
 from IPython.utils.importstring import import_item
 from IPython.utils import submodule
 from IPython.utils.process import check_pid
 from IPython.utils.traitlets import (
     Dict, Unicode, Integer, List, Bool, Bytes, Instance,
     DottedObjectName, TraitError,
 )
 from IPython.utils import py3compat
 from IPython.utils.path import filefind, get_ipython_dir
 
 from .utils import url_path_join
 
 #-----------------------------------------------------------------------------
 # Module globals
 #-----------------------------------------------------------------------------
 
 _examples = """
 ipython notebook                       # start the notebook
 ipython notebook --profile=sympy       # use the sympy profile
 ipython notebook --certfile=mycert.pem # use SSL/TLS certificate
 """
 
 #-----------------------------------------------------------------------------
 # Helper functions
 #-----------------------------------------------------------------------------
 
 def random_ports(port, n):
     """Generate a list of n random ports near the given port.
 
     The first 5 ports will be sequential, and the remaining n-5 will be
     randomly selected in the range [port-2*n, port+2*n].
     """
     for i in range(min(5, n)):
         yield port + i
     for i in range(n-5):
         yield max(1, port + random.randint(-2*n, 2*n))
 
 def load_handlers(name):
     """Load the (URL pattern, handler) tuples for each component."""
     name = 'IPython.html.' + name
     mod = __import__(name, fromlist=['default_handlers'])
     return mod.default_handlers
 
 #-----------------------------------------------------------------------------
 # The Tornado web application
 #-----------------------------------------------------------------------------
 
 class NotebookWebApplication(web.Application):
 
     def __init__(self, ipython_app, kernel_manager, contents_manager,
                  cluster_manager, session_manager, kernel_spec_manager, log,
                  base_url, default_url, settings_overrides, jinja_env_options):
 
         settings = self.init_settings(
             ipython_app, kernel_manager, contents_manager, cluster_manager,
             session_manager, kernel_spec_manager, log, base_url, default_url,
             settings_overrides, jinja_env_options)
         handlers = self.init_handlers(settings)
 
         super(NotebookWebApplication, self).__init__(handlers, **settings)
 
     def init_settings(self, ipython_app, kernel_manager, contents_manager,
                       cluster_manager, session_manager, kernel_spec_manager,
                       log, base_url, default_url, settings_overrides,
                       jinja_env_options=None):
 
         _template_path = settings_overrides.get(
             "template_path",
             ipython_app.template_file_path,
         )
         if isinstance(_template_path, str):
             _template_path = (_template_path,)
         template_path = [os.path.expanduser(path) for path in _template_path]
 
         jenv_opt = jinja_env_options if jinja_env_options else {}
         env = Environment(loader=FileSystemLoader(template_path), **jenv_opt)
         settings = dict(
             # basics
             log_function=log_request,
             base_url=base_url,
             default_url=default_url,
             template_path=template_path,
             static_path=ipython_app.static_file_path,
             static_handler_class = FileFindHandler,
             static_url_prefix = url_path_join(base_url,'/static/'),
             
             # authentication
             cookie_secret=ipython_app.cookie_secret,
             login_url=url_path_join(base_url,'/login'),
             password=ipython_app.password,
             
             # managers
             kernel_manager=kernel_manager,
             contents_manager=contents_manager,
             cluster_manager=cluster_manager,
             session_manager=session_manager,
             kernel_spec_manager=kernel_spec_manager,
 
             # IPython stuff
             nbextensions_path = ipython_app.nbextensions_path,
             websocket_url=ipython_app.websocket_url,
             mathjax_url=ipython_app.mathjax_url,
             config=ipython_app.config,
             jinja2_env=env,
             terminals_available=False,  # Set later if terminals are available
             profile_dir = ipython_app.profile_dir.location,
         )
 
         # allow custom overrides for the tornado web app.
         settings.update(settings_overrides)
         return settings
 
     def init_handlers(self, settings):
         """Load the (URL pattern, handler) tuples for each component."""
         
         # Order matters. The first handler to match the URL will handle the request.
         handlers = []
         handlers.extend(load_handlers('tree.handlers'))
         handlers.extend(load_handlers('auth.login'))
         handlers.extend(load_handlers('auth.logout'))
         handlers.extend(load_handlers('files.handlers'))
         handlers.extend(load_handlers('notebook.handlers'))
         handlers.extend(load_handlers('nbconvert.handlers'))
         handlers.extend(load_handlers('kernelspecs.handlers'))
         handlers.extend(load_handlers('services.config.handlers'))
         handlers.extend(load_handlers('services.kernels.handlers'))
         handlers.extend(load_handlers('services.contents.handlers'))
         handlers.extend(load_handlers('services.clusters.handlers'))
         handlers.extend(load_handlers('services.sessions.handlers'))
         handlers.extend(load_handlers('services.nbconvert.handlers'))
         handlers.extend(load_handlers('services.kernelspecs.handlers'))
         handlers.append(
             (r"/nbextensions/(.*)", FileFindHandler, {'path' : settings['nbextensions_path']}),
         )
         # register base handlers last
         handlers.extend(load_handlers('base.handlers'))
         # set the URL that will be redirected from `/`
         handlers.append(
             (r'/?', web.RedirectHandler, {
                 'url' : url_path_join(settings['base_url'], settings['default_url']),
                 'permanent': False, # want 302, not 301
             })
         )
         # prepend base_url onto the patterns that we match
         new_handlers = []
         for handler in handlers:
             pattern = url_path_join(settings['base_url'], handler[0])
             new_handler = tuple([pattern] + list(handler[1:]))
             new_handlers.append(new_handler)
         # add 404 on the end, which will catch everything that falls through
         new_handlers.append((r'(.*)', Template404))
         return new_handlers
 
 
 class NbserverListApp(BaseIPythonApplication):
     
     description="List currently running notebook servers in this profile."
     
     flags = dict(
         json=({'NbserverListApp': {'json': True}},
               "Produce machine-readable JSON output."),
     )
     
     json = Bool(False, config=True,
           help="If True, each line of output will be a JSON object with the "
                   "details from the server info file.")
 
     def start(self):
         if not self.json:
             print("Currently running servers:")
         for serverinfo in list_running_servers(self.profile):
             if self.json:
                 print(json.dumps(serverinfo))
             else:
                 print(serverinfo['url'], "::", serverinfo['notebook_dir'])
 
 #-----------------------------------------------------------------------------
 # Aliases and Flags
 #-----------------------------------------------------------------------------
 
 flags = dict(base_flags)
 flags['no-browser']=(
     {'NotebookApp' : {'open_browser' : False}},
     "Don't open the notebook in a browser after startup."
 )
 flags['pylab']=(
     {'NotebookApp' : {'pylab' : 'warn'}},
     "DISABLED: use %pylab or %matplotlib in the notebook to enable matplotlib."
 )
 flags['no-mathjax']=(
     {'NotebookApp' : {'enable_mathjax' : False}},
     """Disable MathJax
     
     MathJax is the javascript library IPython uses to render math/LaTeX. It is
     very large, so you may want to disable it if you have a slow internet
     connection, or for offline use of the notebook.
     
     When disabled, equations etc. will appear as their untransformed TeX source.
     """
 )
 
 # Add notebook manager flags
 flags.update(boolean_flag('script', 'FileContentsManager.save_script',
                'DEPRECATED, IGNORED',
                'DEPRECATED, IGNORED'))
 
 aliases = dict(base_aliases)
 
 aliases.update({
     'ip': 'NotebookApp.ip',
     'port': 'NotebookApp.port',
     'port-retries': 'NotebookApp.port_retries',
     'transport': 'KernelManager.transport',
     'keyfile': 'NotebookApp.keyfile',
     'certfile': 'NotebookApp.certfile',
     'notebook-dir': 'NotebookApp.notebook_dir',
     'browser': 'NotebookApp.browser',
     'pylab': 'NotebookApp.pylab',
 })
 
 #-----------------------------------------------------------------------------
 # NotebookApp
 #-----------------------------------------------------------------------------
 
 class NotebookApp(BaseIPythonApplication):
 
     name = 'ipython-notebook'
     
     description = """
         The IPython HTML Notebook.
         
         This launches a Tornado based HTML Notebook Server that serves up an
         HTML5/Javascript Notebook client.
     """
     examples = _examples
     aliases = aliases
     flags = flags
     
     classes = [
         KernelManager, ProfileDir, Session, MappingKernelManager,
         ContentsManager, FileContentsManager, NotebookNotary,
     ]
     flags = Dict(flags)
     aliases = Dict(aliases)
     
     subcommands = dict(
         list=(NbserverListApp, NbserverListApp.description.splitlines()[0]),
     )
 
     ipython_kernel_argv = List(Unicode)
     
     _log_formatter_cls = LogFormatter
 
     def _log_level_default(self):
         return logging.INFO
 
     def _log_datefmt_default(self):
         """Exclude date from default date format"""
         return "%H:%M:%S"
     
     def _log_format_default(self):
         """override default log format to include time"""
         return u"%(color)s[%(levelname)1.1s %(asctime)s.%(msecs).03d %(name)s]%(end_color)s %(message)s"
 
     # create requested profiles by default, if they don't exist:
     auto_create = Bool(True)
 
     # file to be opened in the notebook server
     file_to_run = Unicode('', config=True)
-    def _file_to_run_changed(self, name, old, new):
-        path, base = os.path.split(new)
-        if path:
-            self.file_to_run = base
-            self.notebook_dir = path
 
     # Network related information
     
     allow_origin = Unicode('', config=True,
         help="""Set the Access-Control-Allow-Origin header
         
         Use '*' to allow any origin to access your server.
         
         Takes precedence over allow_origin_pat.
         """
     )
     
     allow_origin_pat = Unicode('', config=True,
         help="""Use a regular expression for the Access-Control-Allow-Origin header
         
         Requests from an origin matching the expression will get replies with:
         
             Access-Control-Allow-Origin: origin
         
         where `origin` is the origin of the request.
         
         Ignored if allow_origin is set.
         """
     )
     
     allow_credentials = Bool(False, config=True,
         help="Set the Access-Control-Allow-Credentials: true header"
     )
     
     default_url = Unicode('/tree', config=True,
         help="The default URL to redirect to from `/`"
     )
     
     ip = Unicode('localhost', config=True,
         help="The IP address the notebook server will listen on."
     )
 
     def _ip_changed(self, name, old, new):
         if new == u'*': self.ip = u''
 
     port = Integer(8888, config=True,
         help="The port the notebook server will listen on."
     )
     port_retries = Integer(50, config=True,
         help="The number of additional ports to try if the specified port is not available."
     )
 
     certfile = Unicode(u'', config=True, 
         help="""The full path to an SSL/TLS certificate file."""
     )
     
     keyfile = Unicode(u'', config=True, 
         help="""The full path to a private key file for usage with SSL/TLS."""
     )
     
     cookie_secret_file = Unicode(config=True,
         help="""The file where the cookie secret is stored."""
     )
     def _cookie_secret_file_default(self):
         if self.profile_dir is None:
             return ''
         return os.path.join(self.profile_dir.security_dir, 'notebook_cookie_secret')
     
     cookie_secret = Bytes(b'', config=True,
         help="""The random bytes used to secure cookies.
         By default this is a new random number every time you start the Notebook.
         Set it to a value in a config file to enable logins to persist across server sessions.
         
         Note: Cookie secrets should be kept private, do not share config files with
         cookie_secret stored in plaintext (you can read the value from a file).
         """
     )
     def _cookie_secret_default(self):
         if os.path.exists(self.cookie_secret_file):
             with io.open(self.cookie_secret_file, 'rb') as f:
                 return f.read()
         else:
             secret = base64.encodestring(os.urandom(1024))
             self._write_cookie_secret_file(secret)
             return secret
     
     def _write_cookie_secret_file(self, secret):
         """write my secret to my secret_file"""
         self.log.info("Writing notebook server cookie secret to %s", self.cookie_secret_file)
         with io.open(self.cookie_secret_file, 'wb') as f:
             f.write(secret)
         try:
             os.chmod(self.cookie_secret_file, 0o600)
         except OSError:
             self.log.warn(
                 "Could not set permissions on %s",
                 self.cookie_secret_file
             )
 
     password = Unicode(u'', config=True,
                       help="""Hashed password to use for web authentication.
 
                       To generate, type in a python/IPython shell:
 
                         from IPython.lib import passwd; passwd()
 
                       The string should be of the form type:salt:hashed-password.
                       """
     )
 
     open_browser = Bool(True, config=True,
                         help="""Whether to open in a browser after starting.
                         The specific browser used is platform dependent and
                         determined by the python standard library `webbrowser`
                         module, unless it is overridden using the --browser
                         (NotebookApp.browser) configuration option.
                         """)
 
     browser = Unicode(u'', config=True,
                       help="""Specify what command to use to invoke a web
                       browser when opening the notebook. If not specified, the
                       default browser will be determined by the `webbrowser`
                       standard library module, which allows setting of the
                       BROWSER environment variable to override it.
                       """)
     
     webapp_settings = Dict(config=True,
         help="DEPRECATED, use tornado_settings"
     )
     def _webapp_settings_changed(self, name, old, new):
         self.log.warn("\n    webapp_settings is deprecated, use tornado_settings.\n")
         self.tornado_settings = new
     
     tornado_settings = Dict(config=True,
             help="Supply overrides for the tornado.web.Application that the "
                  "IPython notebook uses.")
 
     jinja_environment_options = Dict(config=True, 
             help="Supply extra arguments that will be passed to Jinja environment.")
 
     
     enable_mathjax = Bool(True, config=True,
         help="""Whether to enable MathJax for typesetting math/TeX
 
         MathJax is the javascript library IPython uses to render math/LaTeX. It is
         very large, so you may want to disable it if you have a slow internet
         connection, or for offline use of the notebook.
 
         When disabled, equations etc. will appear as their untransformed TeX source.
         """
     )
     def _enable_mathjax_changed(self, name, old, new):
         """set mathjax url to empty if mathjax is disabled"""
         if not new:
             self.mathjax_url = u''
 
     base_url = Unicode('/', config=True,
                                help='''The base URL for the notebook server.
 
                                Leading and trailing slashes can be omitted,
                                and will automatically be added.
                                ''')
     def _base_url_changed(self, name, old, new):
         if not new.startswith('/'):
             self.base_url = '/'+new
         elif not new.endswith('/'):
             self.base_url = new+'/'
     
     base_project_url = Unicode('/', config=True, help="""DEPRECATED use base_url""")
     def _base_project_url_changed(self, name, old, new):
         self.log.warn("base_project_url is deprecated, use base_url")
         self.base_url = new
 
     extra_static_paths = List(Unicode, config=True,
         help="""Extra paths to search for serving static files.
         
         This allows adding javascript/css to be available from the notebook server machine,
         or overriding individual files in the IPython"""
     )
     def _extra_static_paths_default(self):
         return [os.path.join(self.profile_dir.location, 'static')]
     
     @property
     def static_file_path(self):
         """return extra paths + the default location"""
         return self.extra_static_paths + [DEFAULT_STATIC_FILES_PATH]
 
     extra_template_paths = List(Unicode, config=True,
         help="""Extra paths to search for serving jinja templates.
 
         Can be used to override templates from IPython.html.templates."""
     )
     def _extra_template_paths_default(self):
         return []
 
     @property
     def template_file_path(self):
         """return extra paths + the default locations"""
         return self.extra_template_paths + DEFAULT_TEMPLATE_PATH_LIST
 
     nbextensions_path = List(Unicode, config=True,
         help="""paths for Javascript extensions. By default, this is just IPYTHONDIR/nbextensions"""
     )
     def _nbextensions_path_default(self):
         return [os.path.join(get_ipython_dir(), 'nbextensions')]
 
     websocket_url = Unicode("", config=True,
         help="""The base URL for websockets,
         if it differs from the HTTP server (hint: it almost certainly doesn't).
         
         Should be in the form of an HTTP origin: ws[s]://hostname[:port]
         """
     )
     mathjax_url = Unicode("", config=True,
         help="""The url for MathJax.js."""
     )
     def _mathjax_url_default(self):
         if not self.enable_mathjax:
             return u''
         static_url_prefix = self.tornado_settings.get("static_url_prefix",
                          url_path_join(self.base_url, "static")
         )
         
         # try local mathjax, either in nbextensions/mathjax or static/mathjax
         for (url_prefix, search_path) in [
             (url_path_join(self.base_url, "nbextensions"), self.nbextensions_path),
             (static_url_prefix, self.static_file_path),
         ]:
             self.log.debug("searching for local mathjax in %s", search_path)
             try:
                 mathjax = filefind(os.path.join('mathjax', 'MathJax.js'), search_path)
             except IOError:
                 continue
             else:
                 url = url_path_join(url_prefix, u"mathjax/MathJax.js")
                 self.log.info("Serving local MathJax from %s at %s", mathjax, url)
                 return url
         
         # no local mathjax, serve from CDN
         url = u"https://cdn.mathjax.org/mathjax/latest/MathJax.js"
         self.log.info("Using MathJax from CDN: %s", url)
         return url
     
     def _mathjax_url_changed(self, name, old, new):
         if new and not self.enable_mathjax:
             # enable_mathjax=False overrides mathjax_url
             self.mathjax_url = u''
         else:
             self.log.info("Using MathJax: %s", new)
 
     contents_manager_class = DottedObjectName('IPython.html.services.contents.filemanager.FileContentsManager',
         config=True,
         help='The notebook manager class to use.'
     )
     kernel_manager_class = DottedObjectName('IPython.html.services.kernels.kernelmanager.MappingKernelManager',
         config=True,
         help='The kernel manager class to use.'
     )
     session_manager_class = DottedObjectName('IPython.html.services.sessions.sessionmanager.SessionManager',
         config=True,
         help='The session manager class to use.'
     )
     cluster_manager_class = DottedObjectName('IPython.html.services.clusters.clustermanager.ClusterManager',
         config=True,
         help='The cluster manager class to use.'
     )
 
     kernel_spec_manager = Instance(KernelSpecManager)
 
     def _kernel_spec_manager_default(self):
         return KernelSpecManager(ipython_dir=self.ipython_dir)
 
     trust_xheaders = Bool(False, config=True,
         help=("Whether to trust or not X-Scheme/X-Forwarded-Proto and X-Real-Ip/X-Forwarded-For headers"
               "sent by the upstream reverse proxy. Necessary if the proxy handles SSL")
     )
     
     info_file = Unicode()
 
     def _info_file_default(self):
         info_file = "nbserver-%s.json"%os.getpid()
         return os.path.join(self.profile_dir.security_dir, info_file)
     
-    notebook_dir = Unicode(py3compat.getcwd(), config=True,
-        help="The directory to use for notebooks and kernels."
-    )
-    
     pylab = Unicode('disabled', config=True,
         help="""
         DISABLED: use %pylab or %matplotlib in the notebook to enable matplotlib.
         """
     )
     def _pylab_changed(self, name, old, new):
         """when --pylab is specified, display a warning and exit"""
         if new != 'warn':
             backend = ' %s' % new
         else:
             backend = ''
         self.log.error("Support for specifying --pylab on the command line has been removed.")
         self.log.error(
             "Please use `%pylab{0}` or `%matplotlib{0}` in the notebook itself.".format(backend)
         )
         self.exit(1)
 
+    notebook_dir = Unicode(config=True,
+        help="The directory to use for notebooks and kernels."
+    )
+
+    def _notebook_dir_default(self):
+        if self.file_to_run:
+            return os.path.dirname(os.path.abspath(self.file_to_run))
+        else:
+            return py3compat.getcwd()
+
     def _notebook_dir_changed(self, name, old, new):
         """Do a bit of validation of the notebook dir."""
         if not os.path.isabs(new):
             # If we receive a non-absolute path, make it absolute.
             self.notebook_dir = os.path.abspath(new)
             return
         if not os.path.isdir(new):
             raise TraitError("No such notebook dir: %r" % new)
         
         # setting App.notebook_dir implies setting notebook and kernel dirs as well
         self.config.FileContentsManager.root_dir = new
         self.config.MappingKernelManager.root_dir = new
         
 
     def parse_command_line(self, argv=None):
         super(NotebookApp, self).parse_command_line(argv)
         
         if self.extra_args:
             arg0 = self.extra_args[0]
             f = os.path.abspath(arg0)
             self.argv.remove(arg0)
             if not os.path.exists(f):
                 self.log.critical("No such file or directory: %s", f)
                 self.exit(1)
             
             # Use config here, to ensure that it takes higher priority than
             # anything that comes from the profile.
             c = Config()
             if os.path.isdir(f):
                 c.NotebookApp.notebook_dir = f
             elif os.path.isfile(f):
                 c.NotebookApp.file_to_run = f
             self.update_config(c)
 
     def init_kernel_argv(self):
         """add the profile-dir to arguments to be passed to IPython kernels"""
         # FIXME: remove special treatment of IPython kernels
         # Kernel should get *absolute* path to profile directory
         self.ipython_kernel_argv = ["--profile-dir", self.profile_dir.location]
 
     def init_configurables(self):
         # force Session default to be secure
         default_secure(self.config)
         kls = import_item(self.kernel_manager_class)
         self.kernel_manager = kls(
             parent=self, log=self.log, ipython_kernel_argv=self.ipython_kernel_argv,
             connection_dir = self.profile_dir.security_dir,
         )
         kls = import_item(self.contents_manager_class)
         self.contents_manager = kls(parent=self, log=self.log)
         kls = import_item(self.session_manager_class)
         self.session_manager = kls(parent=self, log=self.log,
                                    kernel_manager=self.kernel_manager,
                                    contents_manager=self.contents_manager)
         kls = import_item(self.cluster_manager_class)
         self.cluster_manager = kls(parent=self, log=self.log)
         self.cluster_manager.update_profiles()
 
     def init_logging(self):
         # This prevents double log messages because tornado use a root logger that
         # self.log is a child of. The logging module dipatches log messages to a log
         # and all of its ancenstors until propagate is set to False.
         self.log.propagate = False
         
         for log in app_log, access_log, gen_log:
             # consistent log output name (NotebookApp instead of tornado.access, etc.)
             log.name = self.log.name
         # hook up tornado 3's loggers to our app handlers
         logger = logging.getLogger('tornado')
         logger.propagate = True
         logger.parent = self.log
         logger.setLevel(self.log.level)
     
     def init_webapp(self):
         """initialize tornado webapp and httpserver"""
         self.tornado_settings['allow_origin'] = self.allow_origin
         if self.allow_origin_pat:
             self.tornado_settings['allow_origin_pat'] = re.compile(self.allow_origin_pat)
         self.tornado_settings['allow_credentials'] = self.allow_credentials
         
         self.web_app = NotebookWebApplication(
             self, self.kernel_manager, self.contents_manager,
             self.cluster_manager, self.session_manager, self.kernel_spec_manager,
             self.log, self.base_url, self.default_url, self.tornado_settings,
             self.jinja_environment_options
         )
         if self.certfile:
             ssl_options = dict(certfile=self.certfile)
             if self.keyfile:
                 ssl_options['keyfile'] = self.keyfile
         else:
             ssl_options = None
         self.web_app.password = self.password
         self.http_server = httpserver.HTTPServer(self.web_app, ssl_options=ssl_options,
                                                  xheaders=self.trust_xheaders)
         if not self.ip:
             warning = "WARNING: The notebook server is listening on all IP addresses"
             if ssl_options is None:
                 self.log.critical(warning + " and not using encryption. This "
                     "is not recommended.")
             if not self.password:
                 self.log.critical(warning + " and not using authentication. "
                     "This is highly insecure and not recommended.")
         success = None
         for port in random_ports(self.port, self.port_retries+1):
             try:
                 self.http_server.listen(port, self.ip)
             except socket.error as e:
                 if e.errno == errno.EADDRINUSE:
                     self.log.info('The port %i is already in use, trying another random port.' % port)
                     continue
                 elif e.errno in (errno.EACCES, getattr(errno, 'WSAEACCES', errno.EACCES)):
                     self.log.warn("Permission to listen on port %i denied" % port)
                     continue
                 else:
                     raise
             else:
                 self.port = port
                 success = True
                 break
         if not success:
             self.log.critical('ERROR: the notebook server could not be started because '
                               'no available port could be found.')
             self.exit(1)
     
     @property
     def display_url(self):
         ip = self.ip if self.ip else '[all ip addresses on your system]'
         return self._url(ip)
 
     @property
     def connection_url(self):
         ip = self.ip if self.ip else 'localhost'
         return self._url(ip)
 
     def _url(self, ip):
         proto = 'https' if self.certfile else 'http'
         return "%s://%s:%i%s" % (proto, ip, self.port, self.base_url)
 
     def init_terminals(self):
         try:
             from .terminal import initialize
             initialize(self.web_app)
             self.web_app.settings['terminals_available'] = True
         except ImportError as e:
             self.log.info("Terminals not available (error was %s)", e)
 
     def init_signal(self):
         if not sys.platform.startswith('win'):
             signal.signal(signal.SIGINT, self._handle_sigint)
         signal.signal(signal.SIGTERM, self._signal_stop)
         if hasattr(signal, 'SIGUSR1'):
             # Windows doesn't support SIGUSR1
             signal.signal(signal.SIGUSR1, self._signal_info)
         if hasattr(signal, 'SIGINFO'):
             # only on BSD-based systems
             signal.signal(signal.SIGINFO, self._signal_info)
     
     def _handle_sigint(self, sig, frame):
         """SIGINT handler spawns confirmation dialog"""
         # register more forceful signal handler for ^C^C case
         signal.signal(signal.SIGINT, self._signal_stop)
         # request confirmation dialog in bg thread, to avoid
         # blocking the App
         thread = threading.Thread(target=self._confirm_exit)
         thread.daemon = True
         thread.start()
     
     def _restore_sigint_handler(self):
         """callback for restoring original SIGINT handler"""
         signal.signal(signal.SIGINT, self._handle_sigint)
     
     def _confirm_exit(self):
         """confirm shutdown on ^C
         
         A second ^C, or answering 'y' within 5s will cause shutdown,
         otherwise original SIGINT handler will be restored.
         
         This doesn't work on Windows.
         """
         info = self.log.info
         info('interrupted')
         print(self.notebook_info())
         sys.stdout.write("Shutdown this notebook server (y/[n])? ")
         sys.stdout.flush()
         r,w,x = select.select([sys.stdin], [], [], 5)
         if r:
             line = sys.stdin.readline()
             if line.lower().startswith('y') and 'n' not in line.lower():
                 self.log.critical("Shutdown confirmed")
                 ioloop.IOLoop.instance().stop()
                 return
         else:
             print("No answer for 5s:", end=' ')
         print("resuming operation...")
         # no answer, or answer is no:
         # set it back to original SIGINT handler
         # use IOLoop.add_callback because signal.signal must be called
         # from main thread
         ioloop.IOLoop.instance().add_callback(self._restore_sigint_handler)
     
     def _signal_stop(self, sig, frame):
         self.log.critical("received signal %s, stopping", sig)
         ioloop.IOLoop.instance().stop()
 
     def _signal_info(self, sig, frame):
         print(self.notebook_info())
     
     def init_components(self):
         """Check the components submodule, and warn if it's unclean"""
         status = submodule.check_submodule_status()
         if status == 'missing':
             self.log.warn("components submodule missing, running `git submodule update`")
             submodule.update_submodules(submodule.ipython_parent())
         elif status == 'unclean':
             self.log.warn("components submodule unclean, you may see 404s on static/components")
             self.log.warn("run `setup.py submodule` or `git submodule update` to update")
     
     @catch_config_error
     def initialize(self, argv=None):
         super(NotebookApp, self).initialize(argv)
         self.init_logging()
         self.init_kernel_argv()
         self.init_configurables()
         self.init_components()
         self.init_webapp()
         self.init_terminals()
         self.init_signal()
 
     def cleanup_kernels(self):
         """Shutdown all kernels.
         
         The kernels will shutdown themselves when this process no longer exists,
         but explicit shutdown allows the KernelManagers to cleanup the connection files.
         """
         self.log.info('Shutting down kernels')
         self.kernel_manager.shutdown_all()
 
     def notebook_info(self):
         "Return the current working directory and the server url information"
         info = self.contents_manager.info_string() + "\n"
         info += "%d active kernels \n" % len(self.kernel_manager._kernels)
         return info + "The IPython Notebook is running at: %s" % self.display_url
 
     def server_info(self):
         """Return a JSONable dict of information about this server."""
         return {'url': self.connection_url,
                 'hostname': self.ip if self.ip else 'localhost',
                 'port': self.port,
                 'secure': bool(self.certfile),
                 'base_url': self.base_url,
                 'notebook_dir': os.path.abspath(self.notebook_dir),
                 'pid': os.getpid()
                }
 
     def write_server_info_file(self):
         """Write the result of server_info() to the JSON file info_file."""
         with open(self.info_file, 'w') as f:
             json.dump(self.server_info(), f, indent=2)
 
     def remove_server_info_file(self):
         """Remove the nbserver-<pid>.json file created for this server.
         
         Ignores the error raised when the file has already been removed.
         """
         try:
             os.unlink(self.info_file)
         except OSError as e:
             if e.errno != errno.ENOENT:
                 raise
 
     def start(self):
         """ Start the IPython Notebook server app, after initialization
         
         This method takes no arguments so all configuration and initialization
         must be done prior to calling this method."""
         if self.subapp is not None:
             return self.subapp.start()
 
         info = self.log.info
         for line in self.notebook_info().split("\n"):
             info(line)
         info("Use Control-C to stop this server and shut down all kernels (twice to skip confirmation).")
 
         self.write_server_info_file()
 
         if self.open_browser or self.file_to_run:
             try:
                 browser = webbrowser.get(self.browser or None)
             except webbrowser.Error as e:
                 self.log.warn('No web browser found: %s.' % e)
                 browser = None
             
             if self.file_to_run:
-                fullpath = os.path.join(self.notebook_dir, self.file_to_run)
-                if not os.path.exists(fullpath):
-                    self.log.critical("%s does not exist" % fullpath)
+                if not os.path.exists(self.file_to_run):
+                    self.log.critical("%s does not exist" % self.file_to_run)
                     self.exit(1)
-                
-                uri = url_path_join('notebooks', self.file_to_run)
+
+                relpath = os.path.relpath(self.file_to_run, self.notebook_dir)
+                uri = url_path_join('notebooks', *relpath.split(os.sep))
             else:
                 uri = 'tree'
             if browser:
                 b = lambda : browser.open(url_path_join(self.connection_url, uri),
                                           new=2)
                 threading.Thread(target=b).start()
         try:
             ioloop.IOLoop.instance().start()
         except KeyboardInterrupt:
             info("Interrupted...")
         finally:
             self.cleanup_kernels()
             self.remove_server_info_file()
 
 
 def list_running_servers(profile='default'):
     """Iterate over the server info files of running notebook servers.
     
     Given a profile name, find nbserver-* files in the security directory of
     that profile, and yield dicts of their information, each one pertaining to
     a currently running notebook server instance.
     """
     pd = ProfileDir.find_profile_dir_by_name(get_ipython_dir(), name=profile)
     for file in os.listdir(pd.security_dir):
         if file.startswith('nbserver-'):
             with io.open(os.path.join(pd.security_dir, file), encoding='utf-8') as f:
                 info = json.load(f)
 
             # Simple check whether that process is really still running
             if check_pid(info['pid']):
                 yield info
             else:
                 # If the process has died, try to delete its info file
                 try:
                     os.unlink(file)
                 except OSError:
                     pass  # TODO: This should warn or log or something
 #-----------------------------------------------------------------------------
 # Main entry point
 #-----------------------------------------------------------------------------
 
 launch_new_instance = NotebookApp.launch_instance
 

IPython/html/services/contents/filemanager.py

@@ -1,559 +1,565 b''
 """A contents manager that uses the local file system for storage."""
 
 # Copyright (c) IPython Development Team.
 # Distributed under the terms of the Modified BSD License.
 
 import base64
 import io
 import os
 import glob
 import shutil
 
 from tornado import web
 
 from .manager import ContentsManager
 from IPython import nbformat
 from IPython.utils.io import atomic_writing
 from IPython.utils.path import ensure_dir_exists
 from IPython.utils.traitlets import Unicode, Bool, TraitError
 from IPython.utils.py3compat import getcwd
 from IPython.utils import tz
 from IPython.html.utils import is_hidden, to_os_path, url_path_join
 
 
 class FileContentsManager(ContentsManager):
 
-    root_dir = Unicode(getcwd(), config=True)
+    root_dir = Unicode(config=True)
+
+    def _root_dir_default(self):
+        try:
+            return self.parent.notebook_dir
+        except AttributeError:
+            return getcwd()
 
     save_script = Bool(False, config=True, help='DEPRECATED, IGNORED')
     def _save_script_changed(self):
         self.log.warn("""
         Automatically saving notebooks as scripts has been removed.
         Use `ipython nbconvert --to python [notebook]` instead.
         """)
 
     def _root_dir_changed(self, name, old, new):
         """Do a bit of validation of the root_dir."""
         if not os.path.isabs(new):
             # If we receive a non-absolute path, make it absolute.
             self.root_dir = os.path.abspath(new)
             return
         if not os.path.isdir(new):
             raise TraitError("%r is not a directory" % new)
 
     checkpoint_dir = Unicode('.ipynb_checkpoints', config=True,
         help="""The directory name in which to keep file checkpoints
 
         This is a path relative to the file's own directory.
 
         By default, it is .ipynb_checkpoints
         """
     )
 
     def _copy(self, src, dest):
         """copy src to dest
 
         like shutil.copy2, but log errors in copystat
         """
         shutil.copyfile(src, dest)
         try:
             shutil.copystat(src, dest)
         except OSError as e:
             self.log.debug("copystat on %s failed", dest, exc_info=True)
 
     def _get_os_path(self, path):
         """Given an API path, return its file system path.
 
         Parameters
         ----------
         path : string
             The relative API path to the named file.
 
         Returns
         -------
         path : string
             Native, absolute OS path to for a file.
         """
         return to_os_path(path, self.root_dir)
 
     def dir_exists(self, path):
         """Does the API-style path refer to an extant directory?
 
         API-style wrapper for os.path.isdir
 
         Parameters
         ----------
         path : string
             The path to check. This is an API path (`/` separated,
             relative to root_dir).
 
         Returns
         -------
         exists : bool
             Whether the path is indeed a directory.
         """
         path = path.strip('/')
         os_path = self._get_os_path(path=path)
         return os.path.isdir(os_path)
 
     def is_hidden(self, path):
         """Does the API style path correspond to a hidden directory or file?
 
         Parameters
         ----------
         path : string
             The path to check. This is an API path (`/` separated,
             relative to root_dir).
 
         Returns
         -------
         hidden : bool
             Whether the path exists and is hidden.
         """
         path = path.strip('/')
         os_path = self._get_os_path(path=path)
         return is_hidden(os_path, self.root_dir)
 
     def file_exists(self, path):
         """Returns True if the file exists, else returns False.
 
         API-style wrapper for os.path.isfile
 
         Parameters
         ----------
         path : string
             The relative path to the file (with '/' as separator)
 
         Returns
         -------
         exists : bool
             Whether the file exists.
         """
         path = path.strip('/')
         os_path = self._get_os_path(path)
         return os.path.isfile(os_path)
 
     def exists(self, path):
         """Returns True if the path exists, else returns False.
 
         API-style wrapper for os.path.exists
 
         Parameters
         ----------
         path : string
             The API path to the file (with '/' as separator)
 
         Returns
         -------
         exists : bool
             Whether the target exists.
         """
         path = path.strip('/')
         os_path = self._get_os_path(path=path)
         return os.path.exists(os_path)
 
     def _base_model(self, path):
         """Build the common base of a contents model"""
         os_path = self._get_os_path(path)
         info = os.stat(os_path)
         last_modified = tz.utcfromtimestamp(info.st_mtime)
         created = tz.utcfromtimestamp(info.st_ctime)
         # Create the base model.
         model = {}
         model['name'] = path.rsplit('/', 1)[-1]
         model['path'] = path
         model['last_modified'] = last_modified
         model['created'] = created
         model['content'] = None
         model['format'] = None
         return model
 
     def _dir_model(self, path, content=True):
         """Build a model for a directory
 
         if content is requested, will include a listing of the directory
         """
         os_path = self._get_os_path(path)
 
         four_o_four = u'directory does not exist: %r' % os_path
 
         if not os.path.isdir(os_path):
             raise web.HTTPError(404, four_o_four)
         elif is_hidden(os_path, self.root_dir):
             self.log.info("Refusing to serve hidden directory %r, via 404 Error",
                 os_path
             )
             raise web.HTTPError(404, four_o_four)
 
         model = self._base_model(path)
         model['type'] = 'directory'
         if content:
             model['content'] = contents = []
             os_dir = self._get_os_path(path)
             for name in os.listdir(os_dir):
                 os_path = os.path.join(os_dir, name)
                 # skip over broken symlinks in listing
                 if not os.path.exists(os_path):
                     self.log.warn("%s doesn't exist", os_path)
                     continue
                 elif not os.path.isfile(os_path) and not os.path.isdir(os_path):
                     self.log.debug("%s not a regular file", os_path)
                     continue
                 if self.should_list(name) and not is_hidden(os_path, self.root_dir):
                     contents.append(self.get(
                         path='%s/%s' % (path, name),
                         content=False)
                     )
 
             model['format'] = 'json'
 
         return model
 
     def _file_model(self, path, content=True, format=None):
         """Build a model for a file
 
         if content is requested, include the file contents.
 
         format:
           If 'text', the contents will be decoded as UTF-8.
           If 'base64', the raw bytes contents will be encoded as base64.
           If not specified, try to decode as UTF-8, and fall back to base64
         """
         model = self._base_model(path)
         model['type'] = 'file'
         if content:
             os_path = self._get_os_path(path)
             if not os.path.isfile(os_path):
                 # could be FIFO
                 raise web.HTTPError(400, "Cannot get content of non-file %s" % os_path)
             with io.open(os_path, 'rb') as f:
                 bcontent = f.read()
 
             if format != 'base64':
                 try:
                     model['content'] = bcontent.decode('utf8')
                 except UnicodeError as e:
                     if format == 'text':
                         raise web.HTTPError(400, "%s is not UTF-8 encoded" % path)
                 else:
                     model['format'] = 'text'
 
             if model['content'] is None:
                 model['content'] = base64.encodestring(bcontent).decode('ascii')
                 model['format'] = 'base64'
 
         return model
 
 
     def _notebook_model(self, path, content=True):
         """Build a notebook model
 
         if content is requested, the notebook content will be populated
         as a JSON structure (not double-serialized)
         """
         model = self._base_model(path)
         model['type'] = 'notebook'
         if content:
             os_path = self._get_os_path(path)
             with io.open(os_path, 'r', encoding='utf-8') as f:
                 try:
                     nb = nbformat.read(f, as_version=4)
                 except Exception as e:
                     raise web.HTTPError(400, u"Unreadable Notebook: %s %r" % (os_path, e))
             self.mark_trusted_cells(nb, path)
             model['content'] = nb
             model['format'] = 'json'
             self.validate_notebook_model(model)
         return model
 
     def get(self, path, content=True, type_=None, format=None):
         """ Takes a path for an entity and returns its model
 
         Parameters
         ----------
         path : str
             the API path that describes the relative path for the target
         content : bool
             Whether to include the contents in the reply
         type_ : str, optional
             The requested type - 'file', 'notebook', or 'directory'.
             Will raise HTTPError 400 if the content doesn't match.
         format : str, optional
             The requested format for file contents. 'text' or 'base64'.
             Ignored if this returns a notebook or directory model.
 
         Returns
         -------
         model : dict
             the contents model. If content=True, returns the contents
             of the file or directory as well.
         """
         path = path.strip('/')
 
         if not self.exists(path):
             raise web.HTTPError(404, u'No such file or directory: %s' % path)
 
         os_path = self._get_os_path(path)
         if os.path.isdir(os_path):
             if type_ not in (None, 'directory'):
                 raise web.HTTPError(400,
                                 u'%s is a directory, not a %s' % (path, type_))
             model = self._dir_model(path, content=content)
         elif type_ == 'notebook' or (type_ is None and path.endswith('.ipynb')):
             model = self._notebook_model(path, content=content)
         else:
             if type_ == 'directory':
                 raise web.HTTPError(400,
                                 u'%s is not a directory')
             model = self._file_model(path, content=content, format=format)
         return model
 
     def _save_notebook(self, os_path, model, path=''):
         """save a notebook file"""
         # Save the notebook file
         nb = nbformat.from_dict(model['content'])
 
         self.check_and_sign(nb, path)
 
         with atomic_writing(os_path, encoding='utf-8') as f:
             nbformat.write(nb, f, version=nbformat.NO_CONVERT)
 
     def _save_file(self, os_path, model, path=''):
         """save a non-notebook file"""
         fmt = model.get('format', None)
         if fmt not in {'text', 'base64'}:
             raise web.HTTPError(400, "Must specify format of file contents as 'text' or 'base64'")
         try:
             content = model['content']
             if fmt == 'text':
                 bcontent = content.encode('utf8')
             else:
                 b64_bytes = content.encode('ascii')
                 bcontent = base64.decodestring(b64_bytes)
         except Exception as e:
             raise web.HTTPError(400, u'Encoding error saving %s: %s' % (os_path, e))
         with atomic_writing(os_path, text=False) as f:
             f.write(bcontent)
 
     def _save_directory(self, os_path, model, path=''):
         """create a directory"""
         if is_hidden(os_path, self.root_dir):
             raise web.HTTPError(400, u'Cannot create hidden directory %r' % os_path)
         if not os.path.exists(os_path):
             os.mkdir(os_path)
         elif not os.path.isdir(os_path):
             raise web.HTTPError(400, u'Not a directory: %s' % (os_path))
         else:
             self.log.debug("Directory %r already exists", os_path)
 
     def save(self, model, path=''):
         """Save the file model and return the model with no content."""
         path = path.strip('/')
 
         if 'type' not in model:
             raise web.HTTPError(400, u'No file type provided')
         if 'content' not in model and model['type'] != 'directory':
             raise web.HTTPError(400, u'No file content provided')
 
         # One checkpoint should always exist
         if self.file_exists(path) and not self.list_checkpoints(path):
             self.create_checkpoint(path)
 
         os_path = self._get_os_path(path)
         self.log.debug("Saving %s", os_path)
         try:
             if model['type'] == 'notebook':
                 self._save_notebook(os_path, model, path)
             elif model['type'] == 'file':
                 self._save_file(os_path, model, path)
             elif model['type'] == 'directory':
                 self._save_directory(os_path, model, path)
             else:
                 raise web.HTTPError(400, "Unhandled contents type: %s" % model['type'])
         except web.HTTPError:
             raise
         except Exception as e:
             raise web.HTTPError(400, u'Unexpected error while saving file: %s %s' % (os_path, e))
 
         validation_message = None
         if model['type'] == 'notebook':
             self.validate_notebook_model(model)
             validation_message = model.get('message', None)
 
         model = self.get(path, content=False)
         if validation_message:
             model['message'] = validation_message
         return model
 
     def update(self, model, path):
         """Update the file's path
 
         For use in PATCH requests, to enable renaming a file without
         re-uploading its contents. Only used for renaming at the moment.
         """
         path = path.strip('/')
         new_path = model.get('path', path).strip('/')
         if path != new_path:
             self.rename(path, new_path)
         model = self.get(new_path, content=False)
         return model
 
     def delete(self, path):
         """Delete file at path."""
         path = path.strip('/')
         os_path = self._get_os_path(path)
         rm = os.unlink
         if os.path.isdir(os_path):
             listing = os.listdir(os_path)
             # don't delete non-empty directories (checkpoints dir doesn't count)
             if listing and listing != [self.checkpoint_dir]:
                 raise web.HTTPError(400, u'Directory %s not empty' % os_path)
         elif not os.path.isfile(os_path):
             raise web.HTTPError(404, u'File does not exist: %s' % os_path)
 
         # clear checkpoints
         for checkpoint in self.list_checkpoints(path):
             checkpoint_id = checkpoint['id']
             cp_path = self.get_checkpoint_path(checkpoint_id, path)
             if os.path.isfile(cp_path):
                 self.log.debug("Unlinking checkpoint %s", cp_path)
                 os.unlink(cp_path)
 
         if os.path.isdir(os_path):
             self.log.debug("Removing directory %s", os_path)
             shutil.rmtree(os_path)
         else:
             self.log.debug("Unlinking file %s", os_path)
             rm(os_path)
 
     def rename(self, old_path, new_path):
         """Rename a file."""
         old_path = old_path.strip('/')
         new_path = new_path.strip('/')
         if new_path == old_path:
             return
 
         new_os_path = self._get_os_path(new_path)
         old_os_path = self._get_os_path(old_path)
 
         # Should we proceed with the move?
         if os.path.exists(new_os_path):
             raise web.HTTPError(409, u'File already exists: %s' % new_path)
 
         # Move the file
         try:
             shutil.move(old_os_path, new_os_path)
         except Exception as e:
             raise web.HTTPError(500, u'Unknown error renaming file: %s %s' % (old_path, e))
 
         # Move the checkpoints
         old_checkpoints = self.list_checkpoints(old_path)
         for cp in old_checkpoints:
             checkpoint_id = cp['id']
             old_cp_path = self.get_checkpoint_path(checkpoint_id, old_path)
             new_cp_path = self.get_checkpoint_path(checkpoint_id, new_path)
             if os.path.isfile(old_cp_path):
                 self.log.debug("Renaming checkpoint %s -> %s", old_cp_path, new_cp_path)
                 shutil.move(old_cp_path, new_cp_path)
 
     # Checkpoint-related utilities
 
     def get_checkpoint_path(self, checkpoint_id, path):
         """find the path to a checkpoint"""
         path = path.strip('/')
         parent, name = ('/' + path).rsplit('/', 1)
         parent = parent.strip('/')
         basename, ext = os.path.splitext(name)
         filename = u"{name}-{checkpoint_id}{ext}".format(
             name=basename,
             checkpoint_id=checkpoint_id,
             ext=ext,
         )
         os_path = self._get_os_path(path=parent)
         cp_dir = os.path.join(os_path, self.checkpoint_dir)
         ensure_dir_exists(cp_dir)
         cp_path = os.path.join(cp_dir, filename)
         return cp_path
 
     def get_checkpoint_model(self, checkpoint_id, path):
         """construct the info dict for a given checkpoint"""
         path = path.strip('/')
         cp_path = self.get_checkpoint_path(checkpoint_id, path)
         stats = os.stat(cp_path)
         last_modified = tz.utcfromtimestamp(stats.st_mtime)
         info = dict(
             id = checkpoint_id,
             last_modified = last_modified,
         )
         return info
 
     # public checkpoint API
 
     def create_checkpoint(self, path):
         """Create a checkpoint from the current state of a file"""
         path = path.strip('/')
         if not self.file_exists(path):
             raise web.HTTPError(404)
         src_path = self._get_os_path(path)
         # only the one checkpoint ID:
         checkpoint_id = u"checkpoint"
         cp_path = self.get_checkpoint_path(checkpoint_id, path)
         self.log.debug("creating checkpoint for %s", path)
         self._copy(src_path, cp_path)
 
         # return the checkpoint info
         return self.get_checkpoint_model(checkpoint_id, path)
 
     def list_checkpoints(self, path):
         """list the checkpoints for a given file
 
         This contents manager currently only supports one checkpoint per file.
         """
         path = path.strip('/')
         checkpoint_id = "checkpoint"
         os_path = self.get_checkpoint_path(checkpoint_id, path)
         if not os.path.exists(os_path):
             return []
         else:
             return [self.get_checkpoint_model(checkpoint_id, path)]
 
 
     def restore_checkpoint(self, checkpoint_id, path):
         """restore a file to a checkpointed state"""
         path = path.strip('/')
         self.log.info("restoring %s from checkpoint %s", path, checkpoint_id)
         nb_path = self._get_os_path(path)
         cp_path = self.get_checkpoint_path(checkpoint_id, path)
         if not os.path.isfile(cp_path):
             self.log.debug("checkpoint file does not exist: %s", cp_path)
             raise web.HTTPError(404,
                 u'checkpoint does not exist: %s@%s' % (path, checkpoint_id)
             )
         # ensure notebook is readable (never restore from an unreadable notebook)
         if cp_path.endswith('.ipynb'):
             with io.open(cp_path, 'r', encoding='utf-8') as f:
                 nbformat.read(f, as_version=4)
         self._copy(cp_path, nb_path)
         self.log.debug("copying %s -> %s", cp_path, nb_path)
 
     def delete_checkpoint(self, checkpoint_id, path):
         """delete a file's checkpoint"""
         path = path.strip('/')
         cp_path = self.get_checkpoint_path(checkpoint_id, path)
         if not os.path.isfile(cp_path):
             raise web.HTTPError(404,
                 u'Checkpoint does not exist: %s@%s' % (path, checkpoint_id)
             )
         self.log.debug("unlinking %s", cp_path)
         os.unlink(cp_path)
 
     def info_string(self):
         return "Serving notebooks from local directory: %s" % self.root_dir
 
     def get_kernel_path(self, path, model=None):
         """Return the initial working dir a kernel associated with a given notebook"""
         if '/' in path:
             parent_dir = path.rsplit('/', 1)[0]
         else:
             parent_dir = ''
         return self._get_os_path(parent_dir)

IPython/html/services/kernels/kernelmanager.py

@@ -1,119 +1,127 b''
 """A MultiKernelManager for use in the notebook webserver
 
 - raises HTTPErrors
 - creates REST API models
 """
 
 # Copyright (c) IPython Development Team.
 # Distributed under the terms of the Modified BSD License.
 
 import os
 
 from tornado import web
 
 from IPython.kernel.multikernelmanager import MultiKernelManager
-from IPython.utils.traitlets import Unicode, TraitError
+from IPython.utils.traitlets import List, Unicode, TraitError
 
 from IPython.html.utils import to_os_path
 from IPython.utils.py3compat import getcwd
 
 
 class MappingKernelManager(MultiKernelManager):
     """A KernelManager that handles notebook mapping and HTTP error handling"""
 
     def _kernel_manager_class_default(self):
         return "IPython.kernel.ioloop.IOLoopKernelManager"
 
-    root_dir = Unicode(getcwd(), config=True)
+    kernel_argv = List(Unicode)
+
+    root_dir = Unicode(config=True)
+
+    def _root_dir_default(self):
+        try:
+            return self.parent.notebook_dir
+        except AttributeError:
+            return getcwd()
 
     def _root_dir_changed(self, name, old, new):
         """Do a bit of validation of the root dir."""
         if not os.path.isabs(new):
             # If we receive a non-absolute path, make it absolute.
             self.root_dir = os.path.abspath(new)
             return
         if not os.path.exists(new) or not os.path.isdir(new):
             raise TraitError("kernel root dir %r is not a directory" % new)
 
     #-------------------------------------------------------------------------
     # Methods for managing kernels and sessions
     #-------------------------------------------------------------------------
 
     def _handle_kernel_died(self, kernel_id):
         """notice that a kernel died"""
         self.log.warn("Kernel %s died, removing from map.", kernel_id)
         self.remove_kernel(kernel_id)
 
     def cwd_for_path(self, path):
         """Turn API path into absolute OS path."""
         # short circuit for NotebookManagers that pass in absolute paths
         if os.path.exists(path):
             return path
 
         os_path = to_os_path(path, self.root_dir)
         # in the case of notebooks and kernels not being on the same filesystem,
         # walk up to root_dir if the paths don't exist
         while not os.path.exists(os_path) and os_path != self.root_dir:
             os_path = os.path.dirname(os_path)
         return os_path
 
     def start_kernel(self, kernel_id=None, path=None, kernel_name='python', **kwargs):
         """Start a kernel for a session and return its kernel_id.
 
         Parameters
         ----------
         kernel_id : uuid
             The uuid to associate the new kernel with. If this
             is not None, this kernel will be persistent whenever it is
             requested.
         path : API path
             The API path (unicode, '/' delimited) for the cwd.
             Will be transformed to an OS path relative to root_dir.
         kernel_name : str
             The name identifying which kernel spec to launch. This is ignored if
             an existing kernel is returned, but it may be checked in the future.
         """
         if kernel_id is None:
             if path is not None:
                 kwargs['cwd'] = self.cwd_for_path(path)
             kernel_id = super(MappingKernelManager, self).start_kernel(
                                             kernel_name=kernel_name, **kwargs)
             self.log.info("Kernel started: %s" % kernel_id)
             self.log.debug("Kernel args: %r" % kwargs)
             # register callback for failed auto-restart
             self.add_restart_callback(kernel_id,
                 lambda : self._handle_kernel_died(kernel_id),
                 'dead',
             )
         else:
             self._check_kernel_id(kernel_id)
             self.log.info("Using existing kernel: %s" % kernel_id)
         return kernel_id
 
     def shutdown_kernel(self, kernel_id, now=False):
         """Shutdown a kernel by kernel_id"""
         self._check_kernel_id(kernel_id)
         super(MappingKernelManager, self).shutdown_kernel(kernel_id, now=now)
 
     def kernel_model(self, kernel_id):
         """Return a dictionary of kernel information described in the
         JSON standard model."""
         self._check_kernel_id(kernel_id)
         model = {"id":kernel_id,
                  "name": self._kernels[kernel_id].kernel_name}
         return model
 
     def list_kernels(self):
         """Returns a list of kernel_id's of kernels running."""
         kernels = []
         kernel_ids = super(MappingKernelManager, self).list_kernel_ids()
         for kernel_id in kernel_ids:
             model = self.kernel_model(kernel_id)
             kernels.append(model)
         return kernels
 
     # override _check_kernel_id to raise 404 instead of KeyError
     def _check_kernel_id(self, kernel_id):
         """Check a that a kernel_id exists and raise 404 if not."""
         if kernel_id not in self:
             raise web.HTTPError(404, u'Kernel does not exist: %s' % kernel_id)