##// END OF EJS Templates
don't use combine option on ucs package...
MinRK -
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@@ -1,223 +1,223
1 ((= Latex base template (must inherit)
1 ((= Latex base template (must inherit)
2 This template builds upon the abstract template, adding common latex output
2 This template builds upon the abstract template, adding common latex output
3 functions. Figures, data_text,
3 functions. Figures, data_text,
4 This template does not define a docclass, the inheriting class must define this.=))
4 This template does not define a docclass, the inheriting class must define this.=))
5
5
6 ((*- extends 'display_priority.tplx' -*))
6 ((*- extends 'display_priority.tplx' -*))
7
7
8 %===============================================================================
8 %===============================================================================
9 % Abstract overrides
9 % Abstract overrides
10 %===============================================================================
10 %===============================================================================
11
11
12 ((* block header *))
12 ((* block header *))
13 ((* block docclass *))((* endblock docclass *))
13 ((* block docclass *))((* endblock docclass *))
14
14
15 ((* block packages *))
15 ((* block packages *))
16 \usepackage{graphicx} % Used to insert images
16 \usepackage{graphicx} % Used to insert images
17 \usepackage{adjustbox} % Used to constrain images to a maximum size
17 \usepackage{adjustbox} % Used to constrain images to a maximum size
18 \usepackage{color} % Allow colors to be defined
18 \usepackage{color} % Allow colors to be defined
19 \usepackage{enumerate} % Needed for markdown enumerations to work
19 \usepackage{enumerate} % Needed for markdown enumerations to work
20 \usepackage{geometry} % Used to adjust the document margins
20 \usepackage{geometry} % Used to adjust the document margins
21 \usepackage{amsmath} % Equations
21 \usepackage{amsmath} % Equations
22 \usepackage{amssymb} % Equations
22 \usepackage{amssymb} % Equations
23 \usepackage[mathletters,combine]{ucs} % Extended unicode (utf-8) support
23 \usepackage[mathletters]{ucs} % Extended unicode (utf-8) support
24 \usepackage[utf8x]{inputenc} % Allow utf-8 characters in the tex document
24 \usepackage[utf8x]{inputenc} % Allow utf-8 characters in the tex document
25 \usepackage{fancyvrb} % verbatim replacement that allows latex
25 \usepackage{fancyvrb} % verbatim replacement that allows latex
26 \usepackage{grffile} % extends the file name processing of package graphics
26 \usepackage{grffile} % extends the file name processing of package graphics
27 % to support a larger range
27 % to support a larger range
28 % The hyperref package gives us a pdf with properly built
28 % The hyperref package gives us a pdf with properly built
29 % internal navigation ('pdf bookmarks' for the table of contents,
29 % internal navigation ('pdf bookmarks' for the table of contents,
30 % internal cross-reference links, web links for URLs, etc.)
30 % internal cross-reference links, web links for URLs, etc.)
31 \usepackage{hyperref}
31 \usepackage{hyperref}
32 \usepackage{longtable} % longtable support required by pandoc >1.10
32 \usepackage{longtable} % longtable support required by pandoc >1.10
33 ((* endblock packages *))
33 ((* endblock packages *))
34
34
35 ((* block definitions *))
35 ((* block definitions *))
36 \definecolor{orange}{cmyk}{0,0.4,0.8,0.2}
36 \definecolor{orange}{cmyk}{0,0.4,0.8,0.2}
37 \definecolor{darkorange}{rgb}{.71,0.21,0.01}
37 \definecolor{darkorange}{rgb}{.71,0.21,0.01}
38 \definecolor{darkgreen}{rgb}{.12,.54,.11}
38 \definecolor{darkgreen}{rgb}{.12,.54,.11}
39 \definecolor{myteal}{rgb}{.26, .44, .56}
39 \definecolor{myteal}{rgb}{.26, .44, .56}
40 \definecolor{gray}{gray}{0.45}
40 \definecolor{gray}{gray}{0.45}
41 \definecolor{lightgray}{gray}{.95}
41 \definecolor{lightgray}{gray}{.95}
42 \definecolor{mediumgray}{gray}{.8}
42 \definecolor{mediumgray}{gray}{.8}
43 \definecolor{inputbackground}{rgb}{.95, .95, .85}
43 \definecolor{inputbackground}{rgb}{.95, .95, .85}
44 \definecolor{outputbackground}{rgb}{.95, .95, .95}
44 \definecolor{outputbackground}{rgb}{.95, .95, .95}
45 \definecolor{traceback}{rgb}{1, .95, .95}
45 \definecolor{traceback}{rgb}{1, .95, .95}
46 % ansi colors
46 % ansi colors
47 \definecolor{red}{rgb}{.6,0,0}
47 \definecolor{red}{rgb}{.6,0,0}
48 \definecolor{green}{rgb}{0,.65,0}
48 \definecolor{green}{rgb}{0,.65,0}
49 \definecolor{brown}{rgb}{0.6,0.6,0}
49 \definecolor{brown}{rgb}{0.6,0.6,0}
50 \definecolor{blue}{rgb}{0,.145,.698}
50 \definecolor{blue}{rgb}{0,.145,.698}
51 \definecolor{purple}{rgb}{.698,.145,.698}
51 \definecolor{purple}{rgb}{.698,.145,.698}
52 \definecolor{cyan}{rgb}{0,.698,.698}
52 \definecolor{cyan}{rgb}{0,.698,.698}
53 \definecolor{lightgray}{gray}{0.5}
53 \definecolor{lightgray}{gray}{0.5}
54
54
55 % bright ansi colors
55 % bright ansi colors
56 \definecolor{darkgray}{gray}{0.25}
56 \definecolor{darkgray}{gray}{0.25}
57 \definecolor{lightred}{rgb}{1.0,0.39,0.28}
57 \definecolor{lightred}{rgb}{1.0,0.39,0.28}
58 \definecolor{lightgreen}{rgb}{0.48,0.99,0.0}
58 \definecolor{lightgreen}{rgb}{0.48,0.99,0.0}
59 \definecolor{lightblue}{rgb}{0.53,0.81,0.92}
59 \definecolor{lightblue}{rgb}{0.53,0.81,0.92}
60 \definecolor{lightpurple}{rgb}{0.87,0.63,0.87}
60 \definecolor{lightpurple}{rgb}{0.87,0.63,0.87}
61 \definecolor{lightcyan}{rgb}{0.5,1.0,0.83}
61 \definecolor{lightcyan}{rgb}{0.5,1.0,0.83}
62
62
63 % commands and environments needed by pandoc snippets
63 % commands and environments needed by pandoc snippets
64 % extracted from the output of `pandoc -s`
64 % extracted from the output of `pandoc -s`
65
65
66 \DefineShortVerb[commandchars=\\\{\}]{\|}
66 \DefineShortVerb[commandchars=\\\{\}]{\|}
67 \DefineVerbatimEnvironment{Highlighting}{Verbatim}{commandchars=\\\{\}}
67 \DefineVerbatimEnvironment{Highlighting}{Verbatim}{commandchars=\\\{\}}
68 % Add ',fontsize=\small' for more characters per line
68 % Add ',fontsize=\small' for more characters per line
69 \newenvironment{Shaded}{}{}
69 \newenvironment{Shaded}{}{}
70 \newcommand{\KeywordTok}[1]{\textcolor[rgb]{0.00,0.44,0.13}{\textbf{{#1}}}}
70 \newcommand{\KeywordTok}[1]{\textcolor[rgb]{0.00,0.44,0.13}{\textbf{{#1}}}}
71 \newcommand{\DataTypeTok}[1]{\textcolor[rgb]{0.56,0.13,0.00}{{#1}}}
71 \newcommand{\DataTypeTok}[1]{\textcolor[rgb]{0.56,0.13,0.00}{{#1}}}
72 \newcommand{\DecValTok}[1]{\textcolor[rgb]{0.25,0.63,0.44}{{#1}}}
72 \newcommand{\DecValTok}[1]{\textcolor[rgb]{0.25,0.63,0.44}{{#1}}}
73 \newcommand{\BaseNTok}[1]{\textcolor[rgb]{0.25,0.63,0.44}{{#1}}}
73 \newcommand{\BaseNTok}[1]{\textcolor[rgb]{0.25,0.63,0.44}{{#1}}}
74 \newcommand{\FloatTok}[1]{\textcolor[rgb]{0.25,0.63,0.44}{{#1}}}
74 \newcommand{\FloatTok}[1]{\textcolor[rgb]{0.25,0.63,0.44}{{#1}}}
75 \newcommand{\CharTok}[1]{\textcolor[rgb]{0.25,0.44,0.63}{{#1}}}
75 \newcommand{\CharTok}[1]{\textcolor[rgb]{0.25,0.44,0.63}{{#1}}}
76 \newcommand{\StringTok}[1]{\textcolor[rgb]{0.25,0.44,0.63}{{#1}}}
76 \newcommand{\StringTok}[1]{\textcolor[rgb]{0.25,0.44,0.63}{{#1}}}
77 \newcommand{\CommentTok}[1]{\textcolor[rgb]{0.38,0.63,0.69}{\textit{{#1}}}}
77 \newcommand{\CommentTok}[1]{\textcolor[rgb]{0.38,0.63,0.69}{\textit{{#1}}}}
78 \newcommand{\OtherTok}[1]{\textcolor[rgb]{0.00,0.44,0.13}{{#1}}}
78 \newcommand{\OtherTok}[1]{\textcolor[rgb]{0.00,0.44,0.13}{{#1}}}
79 \newcommand{\AlertTok}[1]{\textcolor[rgb]{1.00,0.00,0.00}{\textbf{{#1}}}}
79 \newcommand{\AlertTok}[1]{\textcolor[rgb]{1.00,0.00,0.00}{\textbf{{#1}}}}
80 \newcommand{\FunctionTok}[1]{\textcolor[rgb]{0.02,0.16,0.49}{{#1}}}
80 \newcommand{\FunctionTok}[1]{\textcolor[rgb]{0.02,0.16,0.49}{{#1}}}
81 \newcommand{\RegionMarkerTok}[1]{{#1}}
81 \newcommand{\RegionMarkerTok}[1]{{#1}}
82 \newcommand{\ErrorTok}[1]{\textcolor[rgb]{1.00,0.00,0.00}{\textbf{{#1}}}}
82 \newcommand{\ErrorTok}[1]{\textcolor[rgb]{1.00,0.00,0.00}{\textbf{{#1}}}}
83 \newcommand{\NormalTok}[1]{{#1}}
83 \newcommand{\NormalTok}[1]{{#1}}
84
84
85 % Define a nice break command that doesn't care if a line doesn't already
85 % Define a nice break command that doesn't care if a line doesn't already
86 % exist.
86 % exist.
87 \def\br{\hspace*{\fill} \\* }
87 \def\br{\hspace*{\fill} \\* }
88 % Math Jax compatability definitions
88 % Math Jax compatability definitions
89 \def\gt{>}
89 \def\gt{>}
90 \def\lt{<}
90 \def\lt{<}
91 % Document parameters
91 % Document parameters
92 ((* block title *))\title{((( resources.metadata.name | escape_latex )))}((* endblock title *))
92 ((* block title *))\title{((( resources.metadata.name | escape_latex )))}((* endblock title *))
93 ((* block date *))((* endblock date *))
93 ((* block date *))((* endblock date *))
94 ((* block author *))((* endblock author *))
94 ((* block author *))((* endblock author *))
95 ((* endblock definitions *))
95 ((* endblock definitions *))
96
96
97 ((* block commands *))
97 ((* block commands *))
98 % Prevent overflowing lines due to hard-to-break entities
98 % Prevent overflowing lines due to hard-to-break entities
99 \sloppy
99 \sloppy
100 % Setup hyperref package
100 % Setup hyperref package
101 \hypersetup{
101 \hypersetup{
102 breaklinks=true, % so long urls are correctly broken across lines
102 breaklinks=true, % so long urls are correctly broken across lines
103 colorlinks=true,
103 colorlinks=true,
104 urlcolor=blue,
104 urlcolor=blue,
105 linkcolor=darkorange,
105 linkcolor=darkorange,
106 citecolor=darkgreen,
106 citecolor=darkgreen,
107 }
107 }
108 % Slightly bigger margins than the latex defaults
108 % Slightly bigger margins than the latex defaults
109 ((* block margins *))
109 ((* block margins *))
110 \geometry{verbose,tmargin=1in,bmargin=1in,lmargin=1in,rmargin=1in}
110 \geometry{verbose,tmargin=1in,bmargin=1in,lmargin=1in,rmargin=1in}
111 ((* endblock margins *))
111 ((* endblock margins *))
112 ((* endblock commands *))
112 ((* endblock commands *))
113 ((* endblock header *))
113 ((* endblock header *))
114
114
115 ((* block body *))
115 ((* block body *))
116 \begin{document}
116 \begin{document}
117
117
118 ((* block predoc *))
118 ((* block predoc *))
119 ((* block maketitle *))\maketitle((* endblock maketitle *))
119 ((* block maketitle *))\maketitle((* endblock maketitle *))
120 ((* block abstract *))((* endblock abstract *))
120 ((* block abstract *))((* endblock abstract *))
121 ((* endblock predoc *))
121 ((* endblock predoc *))
122
122
123 ((( super() )))
123 ((( super() )))
124
124
125 % Add a bibliography block to the postdoc
125 % Add a bibliography block to the postdoc
126 ((* block postdoc *))
126 ((* block postdoc *))
127 ((* block bibliography *))((* endblock bibliography *))
127 ((* block bibliography *))((* endblock bibliography *))
128 ((* endblock postdoc *))
128 ((* endblock postdoc *))
129 \end{document}
129 \end{document}
130 ((* endblock body *))
130 ((* endblock body *))
131
131
132 %===============================================================================
132 %===============================================================================
133 % Support blocks
133 % Support blocks
134 %===============================================================================
134 %===============================================================================
135
135
136 % Displaying simple data text
136 % Displaying simple data text
137 ((* block data_text *))
137 ((* block data_text *))
138 \begin{verbatim}
138 \begin{verbatim}
139 ((( output.text )))
139 ((( output.text )))
140 \end{verbatim}
140 \end{verbatim}
141 ((* endblock data_text *))
141 ((* endblock data_text *))
142
142
143 % Display python error text as-is
143 % Display python error text as-is
144 ((* block pyerr *))
144 ((* block pyerr *))
145 \begin{Verbatim}[commandchars=\\\{\}]
145 \begin{Verbatim}[commandchars=\\\{\}]
146 ((( super() )))
146 ((( super() )))
147 \end{Verbatim}
147 \end{Verbatim}
148 ((* endblock pyerr *))
148 ((* endblock pyerr *))
149 ((* block traceback_line *))
149 ((* block traceback_line *))
150 ((( line | indent | strip_ansi | escape_latex )))
150 ((( line | indent | strip_ansi | escape_latex )))
151 ((* endblock traceback_line *))
151 ((* endblock traceback_line *))
152
152
153 % Display stream ouput with coloring
153 % Display stream ouput with coloring
154 ((* block stream *))
154 ((* block stream *))
155 \begin{Verbatim}[commandchars=\\\{\}]
155 \begin{Verbatim}[commandchars=\\\{\}]
156 ((( output.text | escape_latex | ansi2latex )))
156 ((( output.text | escape_latex | ansi2latex )))
157 \end{Verbatim}
157 \end{Verbatim}
158 ((* endblock stream *))
158 ((* endblock stream *))
159
159
160 % Display latex
160 % Display latex
161 ((* block data_latex -*))
161 ((* block data_latex -*))
162 ((*- if output.latex.startswith('$'): -*))
162 ((*- if output.latex.startswith('$'): -*))
163 ((= Replace $ symbols with more explicit, equation block. =))
163 ((= Replace $ symbols with more explicit, equation block. =))
164 \begin{equation*}
164 \begin{equation*}
165 ((( output.latex | strip_dollars )))
165 ((( output.latex | strip_dollars )))
166 \end{equation*}
166 \end{equation*}
167 ((*- else -*))
167 ((*- else -*))
168 ((( output.latex )))
168 ((( output.latex )))
169 ((*- endif *))
169 ((*- endif *))
170 ((* endblock data_latex *))
170 ((* endblock data_latex *))
171
171
172 % Default mechanism for rendering figures
172 % Default mechanism for rendering figures
173 ((*- block data_png -*))((( draw_figure(output.png_filename) )))((*- endblock -*))
173 ((*- block data_png -*))((( draw_figure(output.png_filename) )))((*- endblock -*))
174 ((*- block data_jpg -*))((( draw_figure(output.jpeg_filename) )))((*- endblock -*))
174 ((*- block data_jpg -*))((( draw_figure(output.jpeg_filename) )))((*- endblock -*))
175 ((*- block data_svg -*))((( draw_figure(output.svg_filename) )))((*- endblock -*))
175 ((*- block data_svg -*))((( draw_figure(output.svg_filename) )))((*- endblock -*))
176 ((*- block data_pdf -*))((( draw_figure(output.pdf_filename) )))((*- endblock -*))
176 ((*- block data_pdf -*))((( draw_figure(output.pdf_filename) )))((*- endblock -*))
177
177
178 % Draw a figure using the graphicx package.
178 % Draw a figure using the graphicx package.
179 ((* macro draw_figure(filename) -*))
179 ((* macro draw_figure(filename) -*))
180 ((* set filename = filename | posix_path *))
180 ((* set filename = filename | posix_path *))
181 ((*- block figure scoped -*))
181 ((*- block figure scoped -*))
182 \begin{center}
182 \begin{center}
183 \adjustimage{max size={0.9\linewidth}{0.9\paperheight}}{((( filename )))}
183 \adjustimage{max size={0.9\linewidth}{0.9\paperheight}}{((( filename )))}
184 \end{center}
184 \end{center}
185 { \hspace*{\fill} \\}
185 { \hspace*{\fill} \\}
186 ((*- endblock figure -*))
186 ((*- endblock figure -*))
187 ((*- endmacro *))
187 ((*- endmacro *))
188
188
189 % Draw heading cell. Explicitly map different cell levels.
189 % Draw heading cell. Explicitly map different cell levels.
190 ((* block headingcell scoped *))
190 ((* block headingcell scoped *))
191
191
192 ((* if cell.level == 1 -*))
192 ((* if cell.level == 1 -*))
193 ((* block h1 -*))\section((* endblock h1 -*))
193 ((* block h1 -*))\section((* endblock h1 -*))
194 ((* elif cell.level == 2 -*))
194 ((* elif cell.level == 2 -*))
195 ((* block h2 -*))\subsection((* endblock h2 -*))
195 ((* block h2 -*))\subsection((* endblock h2 -*))
196 ((* elif cell.level == 3 -*))
196 ((* elif cell.level == 3 -*))
197 ((* block h3 -*))\subsubsection((* endblock h3 -*))
197 ((* block h3 -*))\subsubsection((* endblock h3 -*))
198 ((* elif cell.level == 4 -*))
198 ((* elif cell.level == 4 -*))
199 ((* block h4 -*))\paragraph((* endblock h4 -*))
199 ((* block h4 -*))\paragraph((* endblock h4 -*))
200 ((* elif cell.level == 5 -*))
200 ((* elif cell.level == 5 -*))
201 ((* block h5 -*))\subparagraph((* endblock h5 -*))
201 ((* block h5 -*))\subparagraph((* endblock h5 -*))
202 ((* elif cell.level == 6 -*))
202 ((* elif cell.level == 6 -*))
203 ((* block h6 -*))\\*\textit((* endblock h6 -*))
203 ((* block h6 -*))\\*\textit((* endblock h6 -*))
204 ((*- endif -*))
204 ((*- endif -*))
205 {((( cell.source | replace('\n', ' ') | citation2latex | strip_files_prefix | markdown2latex )))}
205 {((( cell.source | replace('\n', ' ') | citation2latex | strip_files_prefix | markdown2latex )))}
206
206
207 ((* endblock headingcell *))
207 ((* endblock headingcell *))
208
208
209 % Redirect pyout to display data priority.
209 % Redirect pyout to display data priority.
210 ((* block pyout scoped *))
210 ((* block pyout scoped *))
211 ((* block data_priority scoped *))
211 ((* block data_priority scoped *))
212 ((( super() )))
212 ((( super() )))
213 ((* endblock *))
213 ((* endblock *))
214 ((* endblock pyout *))
214 ((* endblock pyout *))
215
215
216 % Render markdown
216 % Render markdown
217 ((* block markdowncell scoped *))
217 ((* block markdowncell scoped *))
218 ((( cell.source | citation2latex | strip_files_prefix | markdown2latex )))
218 ((( cell.source | citation2latex | strip_files_prefix | markdown2latex )))
219 ((* endblock markdowncell *))
219 ((* endblock markdowncell *))
220
220
221 % Don't display unknown types
221 % Don't display unknown types
222 ((* block unknowncell scoped *))
222 ((* block unknowncell scoped *))
223 ((* endblock unknowncell *))
223 ((* endblock unknowncell *))
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