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1 | { |
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1 | { | |
2 | "metadata": { |
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2 | "metadata": { | |
3 | "name": "Parallel Magics" |
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3 | "name": "Parallel Magics" | |
4 | }, |
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4 | }, | |
5 | "nbformat": 3, |
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5 | "nbformat": 3, | |
6 | "worksheets": [ |
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6 | "worksheets": [ | |
7 | { |
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7 | { | |
8 | "cells": [ |
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8 | "cells": [ | |
9 | { |
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9 | { | |
10 | "cell_type": "heading", |
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10 | "cell_type": "heading", | |
11 | "level": 1, |
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11 | "level": 1, | |
12 | "source": [ |
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12 | "source": [ | |
13 | "Using Parallel Magics" |
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13 | "Using Parallel Magics" | |
14 | ] |
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14 | ] | |
15 | }, |
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15 | }, | |
16 | { |
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16 | { | |
17 | "cell_type": "markdown", |
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17 | "cell_type": "markdown", | |
18 | "source": [ |
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18 | "source": [ | |
19 | "IPython has a few magics for working with your engines.\n", |
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19 | "IPython has a few magics for working with your engines.\n", | |
20 | "\n", |
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20 | "\n", | |
21 | "This assumes you have started an IPython cluster, either with the notebook interface,\n", |
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21 | "This assumes you have started an IPython cluster, either with the notebook interface,\n", | |
22 | "or the `ipcluster/controller/engine` commands." |
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22 | "or the `ipcluster/controller/engine` commands." | |
23 | ] |
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23 | ] | |
24 | }, |
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24 | }, | |
25 | { |
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25 | { | |
26 | "cell_type": "code", |
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26 | "cell_type": "code", | |
27 | "input": [ |
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27 | "input": [ | |
28 | "from IPython import parallel\n", |
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28 | "from IPython import parallel\n", | |
29 | "rc = parallel.Client()\n", |
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29 | "rc = parallel.Client()\n", | |
30 | "dv = rc[:]\n", |
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30 | "dv = rc[:]\n", | |
31 | "rc.ids" |
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31 | "rc.ids" | |
32 | ], |
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32 | ], | |
33 | "language": "python", |
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33 | "language": "python", | |
34 | "outputs": [] |
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34 | "outputs": [] | |
35 | }, |
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35 | }, | |
36 | { |
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36 | { | |
37 | "cell_type": "markdown", |
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37 | "cell_type": "markdown", | |
38 | "source": [ |
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38 | "source": [ | |
39 | "Creating a Client registers the parallel magics `%px`, `%%px`, `%pxresult`, and `%autopx`. \n", |
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39 | "Creating a Client registers the parallel magics `%px`, `%%px`, `%pxresult`, `pxconfig`, and `%autopx`. \n", | |
40 | "These magics are initially associated with a DirectView always associated with all currently registered engines." |
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40 | "These magics are initially associated with a DirectView always associated with all currently registered engines." | |
41 | ] |
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41 | ] | |
42 | }, |
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42 | }, | |
43 | { |
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43 | { | |
44 | "cell_type": "markdown", |
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44 | "cell_type": "markdown", | |
45 | "source": [ |
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45 | "source": [ | |
46 | "Now we can execute code remotely with `%px`:" |
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46 | "Now we can execute code remotely with `%px`:" | |
47 | ] |
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47 | ] | |
48 | }, |
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48 | }, | |
49 | { |
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49 | { | |
50 | "cell_type": "code", |
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50 | "cell_type": "code", | |
51 | "input": [ |
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51 | "input": [ | |
52 | "%px a=5" |
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52 | "%px a=5" | |
53 | ], |
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53 | ], | |
54 | "language": "python", |
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54 | "language": "python", | |
55 | "outputs": [] |
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55 | "outputs": [] | |
56 | }, |
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56 | }, | |
57 | { |
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57 | { | |
58 | "cell_type": "code", |
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58 | "cell_type": "code", | |
59 | "input": [ |
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59 | "input": [ | |
60 | "%px print a" |
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60 | "%px print a" | |
61 | ], |
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61 | ], | |
62 | "language": "python", |
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62 | "language": "python", | |
63 | "outputs": [] |
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63 | "outputs": [] | |
64 | }, |
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64 | }, | |
65 | { |
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65 | { | |
66 | "cell_type": "code", |
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66 | "cell_type": "code", | |
67 | "input": [ |
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67 | "input": [ | |
68 | "%px a" |
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68 | "%px a" | |
69 | ], |
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69 | ], | |
70 | "language": "python", |
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70 | "language": "python", | |
71 | "outputs": [] |
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71 | "outputs": [] | |
72 | }, |
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72 | }, | |
73 | { |
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73 | { | |
74 | "cell_type": "code", |
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74 | "cell_type": "code", | |
75 | "input": [ |
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75 | "input": [ | |
76 | "with dv.sync_imports():\n", |
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76 | "with dv.sync_imports():\n", | |
77 | " import sys" |
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77 | " import sys" | |
78 | ], |
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78 | ], | |
79 | "language": "python", |
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79 | "language": "python", | |
80 | "outputs": [] |
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80 | "outputs": [] | |
81 | }, |
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81 | }, | |
82 | { |
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82 | { | |
83 | "cell_type": "code", |
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83 | "cell_type": "code", | |
84 | "input": [ |
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84 | "input": [ | |
85 | "%px print >> sys.stderr, \"ERROR\"" |
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85 | "%px print >> sys.stderr, \"ERROR\"" | |
86 | ], |
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86 | ], | |
87 | "language": "python", |
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87 | "language": "python", | |
88 | "outputs": [] |
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88 | "outputs": [] | |
89 | }, |
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89 | }, | |
90 | { |
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90 | { | |
91 | "cell_type": "markdown", |
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91 | "cell_type": "markdown", | |
92 | "source": [ |
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92 | "source": [ | |
93 | "You don't have to wait for results. The `%pxconfig` magic lets you change the default blocking/targets for the `%px` magics:" |
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93 | "You don't have to wait for results. The `%pxconfig` magic lets you change the default blocking/targets for the `%px` magics:" | |
94 | ] |
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94 | ] | |
95 | }, |
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95 | }, | |
96 | { |
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96 | { | |
97 | "cell_type": "code", |
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97 | "cell_type": "code", | |
98 | "input": [ |
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98 | "input": [ | |
99 | "%pxconfig --noblock" |
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99 | "%pxconfig --noblock" | |
100 | ], |
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100 | ], | |
101 | "language": "python", |
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101 | "language": "python", | |
102 | "outputs": [] |
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102 | "outputs": [] | |
103 | }, |
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103 | }, | |
104 | { |
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104 | { | |
105 | "cell_type": "code", |
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105 | "cell_type": "code", | |
106 | "input": [ |
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106 | "input": [ | |
107 | "%px import time\n", |
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107 | "%px import time\n", | |
108 | "%px time.sleep(5)\n", |
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108 | "%px time.sleep(5)\n", | |
109 | "%px time.time()" |
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109 | "%px time.time()" | |
110 | ], |
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110 | ], | |
111 | "language": "python", |
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111 | "language": "python", | |
112 | "outputs": [] |
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112 | "outputs": [] | |
113 | }, |
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113 | }, | |
114 | { |
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114 | { | |
115 | "cell_type": "markdown", |
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115 | "cell_type": "markdown", | |
116 | "source": [ |
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116 | "source": [ | |
117 | "But you will notice that this didn't output the result of the last command.\n", |
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117 | "But you will notice that this didn't output the result of the last command.\n", | |
118 | "For this, we have `%result`, which displays the output of the latest request:" |
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118 | "For this, we have `%pxresult`, which displays the output of the latest request:" | |
119 | ] |
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119 | ] | |
120 | }, |
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120 | }, | |
121 | { |
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121 | { | |
122 | "cell_type": "code", |
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122 | "cell_type": "code", | |
123 | "input": [ |
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123 | "input": [ | |
124 | "%result" |
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124 | "%pxresult" | |
125 | ], |
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125 | ], | |
126 | "language": "python", |
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126 | "language": "python", | |
127 | "outputs": [] |
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127 | "outputs": [] | |
128 | }, |
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128 | }, | |
129 | { |
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129 | { | |
130 | "cell_type": "markdown", |
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130 | "cell_type": "markdown", | |
131 | "source": [ |
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131 | "source": [ | |
132 | "Remember, an IPython engine is IPython, so you can do magics remotely as well!" |
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132 | "Remember, an IPython engine is IPython, so you can do magics remotely as well!" | |
133 | ] |
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133 | ] | |
134 | }, |
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134 | }, | |
135 | { |
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135 | { | |
136 | "cell_type": "code", |
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136 | "cell_type": "code", | |
137 | "input": [ |
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137 | "input": [ | |
138 | "%pxconfig --block\n", |
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138 | "%pxconfig --block\n", | |
139 | "%px %pylab inline" |
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139 | "%px %pylab inline" | |
140 | ], |
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140 | ], | |
141 | "language": "python", |
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141 | "language": "python", | |
142 | "outputs": [] |
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142 | "outputs": [] | |
143 | }, |
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143 | }, | |
144 | { |
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144 | { | |
145 | "cell_type": "markdown", |
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145 | "cell_type": "markdown", | |
146 | "source": [ |
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146 | "source": [ | |
147 | "`%%px` can also be used as a cell magic, for submitting whole blocks.\n", |
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147 | "`%%px` can also be used as a cell magic, for submitting whole blocks.\n", | |
148 | "This one acceps `--block` and `--noblock` flags to specify\n", |
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148 | "This one acceps `--block` and `--noblock` flags to specify\n", | |
149 | "the blocking behavior, though the default is unchanged.\n" |
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149 | "the blocking behavior, though the default is unchanged.\n" | |
150 | ] |
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150 | ] | |
151 | }, |
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151 | }, | |
152 | { |
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152 | { | |
153 | "cell_type": "code", |
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153 | "cell_type": "code", | |
154 | "input": [ |
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154 | "input": [ | |
155 | "dv.scatter('id', dv.targets, flatten=True)\n", |
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155 | "dv.scatter('id', dv.targets, flatten=True)\n", | |
156 | "dv['stride'] = len(dv)" |
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156 | "dv['stride'] = len(dv)" | |
157 | ], |
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157 | ], | |
158 | "language": "python", |
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158 | "language": "python", | |
159 | "outputs": [] |
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159 | "outputs": [] | |
160 | }, |
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160 | }, | |
161 | { |
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161 | { | |
162 | "cell_type": "code", |
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162 | "cell_type": "code", | |
163 | "input": [ |
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163 | "input": [ | |
164 | "%%px --noblock\n", |
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164 | "%%px --noblock\n", | |
165 | "x = linspace(0,pi,1000)\n", |
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165 | "x = linspace(0,pi,1000)\n", | |
166 | "for n in range(id,12, stride):\n", |
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166 | "for n in range(id,12, stride):\n", | |
167 | " print n\n", |
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167 | " print n\n", | |
168 | " plt.plot(x,sin(n*x))\n", |
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168 | " plt.plot(x,sin(n*x))\n", | |
169 | "plt.title(\"Plot %i\" % id)" |
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169 | "plt.title(\"Plot %i\" % id)" | |
170 | ], |
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170 | ], | |
171 | "language": "python", |
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171 | "language": "python", | |
172 | "outputs": [] |
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172 | "outputs": [] | |
173 | }, |
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173 | }, | |
174 | { |
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174 | { | |
175 | "cell_type": "code", |
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175 | "cell_type": "code", | |
176 | "input": [ |
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176 | "input": [ | |
177 | "%result" |
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177 | "%pxresult" | |
178 | ], |
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178 | ], | |
179 | "language": "python", |
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179 | "language": "python", | |
180 | "outputs": [] |
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180 | "outputs": [] | |
181 | }, |
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181 | }, | |
182 | { |
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182 | { | |
183 | "cell_type": "markdown", |
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183 | "cell_type": "markdown", | |
184 | "source": [ |
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184 | "source": [ | |
185 | "It also lets you choose some amount of the grouping of the outputs with `--group-outputs`:\n", |
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185 | "It also lets you choose some amount of the grouping of the outputs with `--group-outputs`:\n", | |
186 | "\n", |
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186 | "\n", | |
187 | "The choices are:\n", |
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187 | "The choices are:\n", | |
188 | "\n", |
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188 | "\n", | |
189 | "* `engine` - all of an engine's output is collected together\n", |
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189 | "* `engine` - all of an engine's output is collected together\n", | |
190 | "* `type` - where stdout of each engine is grouped, etc. (the default)\n", |
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190 | "* `type` - where stdout of each engine is grouped, etc. (the default)\n", | |
191 | "* `order` - same as `type`, but individual displaypub outputs are interleaved.\n", |
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191 | "* `order` - same as `type`, but individual displaypub outputs are interleaved.\n", | |
192 | " That is, it will output the first plot from each engine, then the second from each,\n", |
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192 | " That is, it will output the first plot from each engine, then the second from each,\n", | |
193 | " etc." |
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193 | " etc." | |
194 | ] |
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194 | ] | |
195 | }, |
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195 | }, | |
196 | { |
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196 | { | |
197 | "cell_type": "code", |
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197 | "cell_type": "code", | |
198 | "input": [ |
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198 | "input": [ | |
199 | "%%px --group-outputs=engine\n", |
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199 | "%%px --group-outputs=engine\n", | |
200 | "x = linspace(0,pi,1000)\n", |
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200 | "x = linspace(0,pi,1000)\n", | |
201 | "for n in range(id+1,12, stride):\n", |
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201 | "for n in range(id+1,12, stride):\n", | |
202 | " print n\n", |
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202 | " print n\n", | |
203 | " plt.figure()\n", |
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203 | " plt.figure()\n", | |
204 | " plt.plot(x,sin(n*x))\n", |
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204 | " plt.plot(x,sin(n*x))\n", | |
205 | " plt.title(\"Plot %i\" % n)" |
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205 | " plt.title(\"Plot %i\" % n)" | |
206 | ], |
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206 | ], | |
207 | "language": "python", |
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207 | "language": "python", | |
208 | "outputs": [] |
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208 | "outputs": [] | |
209 | }, |
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209 | }, | |
210 | { |
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210 | { | |
211 | "cell_type": "markdown", |
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211 | "cell_type": "markdown", | |
212 | "source": [ |
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212 | "source": [ | |
213 | "When you specify 'order', then individual display outputs (e.g. plots) will be interleaved.\n", |
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213 | "When you specify 'order', then individual display outputs (e.g. plots) will be interleaved.\n", | |
214 | "\n", |
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214 | "\n", | |
215 | "`%result` takes the same output-ordering arguments as `%%px`, \n", |
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215 | "`%pxresult` takes the same output-ordering arguments as `%%px`, \n", | |
216 | "so you can view the previous result in a variety of different ways with a few sequential calls to `%result`:" |
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216 | "so you can view the previous result in a variety of different ways with a few sequential calls to `%pxresult`:" | |
217 | ] |
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217 | ] | |
218 | }, |
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218 | }, | |
219 | { |
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219 | { | |
220 | "cell_type": "code", |
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220 | "cell_type": "code", | |
221 | "input": [ |
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221 | "input": [ | |
222 | "%result --group-outputs=order" |
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222 | "%pxresult --group-outputs=order" | |
223 | ], |
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223 | ], | |
224 | "language": "python", |
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224 | "language": "python", | |
225 | "outputs": [] |
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225 | "outputs": [] | |
226 | }, |
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226 | }, | |
227 | { |
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227 | { | |
228 | "cell_type": "heading", |
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228 | "cell_type": "heading", | |
229 | "level": 2, |
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229 | "level": 2, | |
230 | "source": [ |
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230 | "source": [ | |
231 | "Single-engine views" |
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231 | "Single-engine views" | |
232 | ] |
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232 | ] | |
233 | }, |
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233 | }, | |
234 | { |
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234 | { | |
235 | "cell_type": "markdown", |
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235 | "cell_type": "markdown", | |
236 | "source": [ |
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236 | "source": [ | |
237 | "When a DirectView has a single target, the output is a bit simpler (no prefixes on stdout/err, etc.):" |
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237 | "When a DirectView has a single target, the output is a bit simpler (no prefixes on stdout/err, etc.):" | |
238 | ] |
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238 | ] | |
239 | }, |
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239 | }, | |
240 | { |
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240 | { | |
241 | "cell_type": "code", |
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241 | "cell_type": "code", | |
242 | "input": [ |
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242 | "input": [ | |
243 | "def generate_output():\n", |
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243 | "def generate_output():\n", | |
244 | " \"\"\"function for testing output\n", |
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244 | " \"\"\"function for testing output\n", | |
245 | " \n", |
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245 | " \n", | |
246 | " publishes two outputs of each type, and returns something\n", |
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246 | " publishes two outputs of each type, and returns something\n", | |
247 | " \"\"\"\n", |
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247 | " \"\"\"\n", | |
248 | " \n", |
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248 | " \n", | |
249 | " import sys,os\n", |
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249 | " import sys,os\n", | |
250 | " from IPython.core.display import display, HTML, Math\n", |
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250 | " from IPython.core.display import display, HTML, Math\n", | |
251 | " \n", |
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251 | " \n", | |
252 | " print \"stdout\"\n", |
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252 | " print \"stdout\"\n", | |
253 | " print >> sys.stderr, \"stderr\"\n", |
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253 | " print >> sys.stderr, \"stderr\"\n", | |
254 | " \n", |
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254 | " \n", | |
255 | " display(HTML(\"<b>HTML</b>\"))\n", |
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255 | " display(HTML(\"<b>HTML</b>\"))\n", | |
256 | " \n", |
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256 | " \n", | |
257 | " print \"stdout2\"\n", |
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257 | " print \"stdout2\"\n", | |
258 | " print >> sys.stderr, \"stderr2\"\n", |
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258 | " print >> sys.stderr, \"stderr2\"\n", | |
259 | " \n", |
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259 | " \n", | |
260 | " display(Math(r\"\\alpha=\\beta\"))\n", |
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260 | " display(Math(r\"\\alpha=\\beta\"))\n", | |
261 | " \n", |
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261 | " \n", | |
262 | " return os.getpid()\n", |
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262 | " return os.getpid()\n", | |
263 | "\n", |
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263 | "\n", | |
264 | "dv['generate_output'] = generate_output" |
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264 | "dv['generate_output'] = generate_output" | |
265 | ], |
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265 | ], | |
266 | "language": "python", |
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266 | "language": "python", | |
267 | "outputs": [] |
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267 | "outputs": [] | |
268 | }, |
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268 | }, | |
269 | { |
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269 | { | |
270 | "cell_type": "markdown", |
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270 | "cell_type": "markdown", | |
271 | "source": [ |
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271 | "source": [ | |
272 | "You can also have more than one set of parallel magics registered at a time.\n", |
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272 | "You can also have more than one set of parallel magics registered at a time.\n", | |
273 | "\n", |
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273 | "\n", | |
274 | "The `View.activate()` method takes a suffix argument, which is added to `'px'`." |
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274 | "The `View.activate()` method takes a suffix argument, which is added to `'px'`." | |
275 | ] |
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275 | ] | |
276 | }, |
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276 | }, | |
277 | { |
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277 | { | |
278 | "cell_type": "code", |
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278 | "cell_type": "code", | |
279 | "input": [ |
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279 | "input": [ | |
280 | "e0 = rc[-1]\n", |
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280 | "e0 = rc[-1]\n", | |
281 | "e0.block = True\n", |
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281 | "e0.block = True\n", | |
282 | "e0.activate('0')" |
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282 | "e0.activate('0')" | |
283 | ], |
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283 | ], | |
284 | "language": "python", |
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284 | "language": "python", | |
285 | "outputs": [] |
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285 | "outputs": [] | |
286 | }, |
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286 | }, | |
287 | { |
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287 | { | |
288 | "cell_type": "code", |
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288 | "cell_type": "code", | |
289 | "input": [ |
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289 | "input": [ | |
290 | "%px0 generate_output()" |
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290 | "%px0 generate_output()" | |
291 | ], |
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291 | ], | |
292 | "language": "python", |
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292 | "language": "python", | |
293 | "outputs": [] |
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293 | "outputs": [] | |
294 | }, |
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294 | }, | |
295 | { |
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295 | { | |
296 | "cell_type": "code", |
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296 | "cell_type": "code", | |
297 | "input": [ |
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297 | "input": [ | |
298 | "%px generate_output()" |
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298 | "%px generate_output()" | |
299 | ], |
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299 | ], | |
300 | "language": "python", |
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300 | "language": "python", | |
301 | "outputs": [] |
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301 | "outputs": [] | |
302 | }, |
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302 | }, | |
303 | { |
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303 | { | |
304 | "cell_type": "markdown", |
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304 | "cell_type": "markdown", | |
305 | "source": [ |
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305 | "source": [ | |
306 | "As mentioned above, we can redisplay those same results with various grouping:" |
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306 | "As mentioned above, we can redisplay those same results with various grouping:" | |
307 | ] |
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307 | ] | |
308 | }, |
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308 | }, | |
309 | { |
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309 | { | |
310 | "cell_type": "code", |
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310 | "cell_type": "code", | |
311 | "input": [ |
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311 | "input": [ | |
312 | "%pxresult --group-outputs order" |
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312 | "%pxresult --group-outputs order" | |
313 | ], |
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313 | ], | |
314 | "language": "python", |
|
314 | "language": "python", | |
315 | "outputs": [] |
|
315 | "outputs": [] | |
316 | }, |
|
316 | }, | |
317 | { |
|
317 | { | |
318 | "cell_type": "code", |
|
318 | "cell_type": "code", | |
319 | "input": [ |
|
319 | "input": [ | |
320 | "%pxresult --group-outputs engine" |
|
320 | "%pxresult --group-outputs engine" | |
321 | ], |
|
321 | ], | |
322 | "language": "python", |
|
322 | "language": "python", | |
323 | "outputs": [] |
|
323 | "outputs": [] | |
324 | }, |
|
324 | }, | |
325 | { |
|
325 | { | |
|
326 | "cell_type": "heading", | |||
|
327 | "level": 2, | |||
|
328 | "source": [ | |||
|
329 | "Parallel Exceptions" | |||
|
330 | ] | |||
|
331 | }, | |||
|
332 | { | |||
|
333 | "cell_type": "markdown", | |||
|
334 | "source": [ | |||
|
335 | "When you raise exceptions with the parallel exception,\n", | |||
|
336 | "the CompositeError raised locally will display your remote traceback." | |||
|
337 | ] | |||
|
338 | }, | |||
|
339 | { | |||
|
340 | "cell_type": "code", | |||
|
341 | "input": [ | |||
|
342 | "%%px\n", | |||
|
343 | "from numpy.random import random\n", | |||
|
344 | "A = random((100,100,'invalid shape'))" | |||
|
345 | ], | |||
|
346 | "language": "python", | |||
|
347 | "outputs": [] | |||
|
348 | }, | |||
|
349 | { | |||
|
350 | "cell_type": "heading", | |||
|
351 | "level": 2, | |||
|
352 | "source": [ | |||
|
353 | "Remote Cell Magics" | |||
|
354 | ] | |||
|
355 | }, | |||
|
356 | { | |||
|
357 | "cell_type": "markdown", | |||
|
358 | "source": [ | |||
|
359 | "Remember, Engines are IPython too, so the cell that is run remotely by %%px can in turn use a cell magic." | |||
|
360 | ] | |||
|
361 | }, | |||
|
362 | { | |||
|
363 | "cell_type": "code", | |||
|
364 | "input": [ | |||
|
365 | "%%px\n", | |||
|
366 | "%%timeit\n", | |||
|
367 | "from numpy.random import random\n", | |||
|
368 | "from numpy.linalg import norm\n", | |||
|
369 | "A = random((100,100))\n", | |||
|
370 | "norm(A, 2) " | |||
|
371 | ], | |||
|
372 | "language": "python", | |||
|
373 | "outputs": [] | |||
|
374 | }, | |||
|
375 | { | |||
326 | "cell_type": "code", |
|
376 | "cell_type": "code", | |
327 | "input": [], |
|
377 | "input": [], | |
328 | "language": "python", |
|
378 | "language": "python", | |
329 | "outputs": [] |
|
379 | "outputs": [] | |
330 | } |
|
380 | } | |
331 | ] |
|
381 | ] | |
332 | } |
|
382 | } | |
333 | ] |
|
383 | ] | |
334 | } No newline at end of file |
|
384 | } |
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