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@@ -1,948 +1,998 b'' | |||||
1 | #!/usr/bin/env python |
|
1 | #!/usr/bin/env python | |
2 | # encoding: utf-8 |
|
2 | # encoding: utf-8 | |
3 |
|
3 | |||
4 | """Start an IPython cluster = (controller + engines).""" |
|
4 | """Start an IPython cluster = (controller + engines).""" | |
5 |
|
5 | |||
6 | #----------------------------------------------------------------------------- |
|
6 | #----------------------------------------------------------------------------- | |
7 | # Copyright (C) 2008 The IPython Development Team |
|
7 | # Copyright (C) 2008 The IPython Development Team | |
8 | # |
|
8 | # | |
9 | # Distributed under the terms of the BSD License. The full license is in |
|
9 | # Distributed under the terms of the BSD License. The full license is in | |
10 | # the file COPYING, distributed as part of this software. |
|
10 | # the file COPYING, distributed as part of this software. | |
11 | #----------------------------------------------------------------------------- |
|
11 | #----------------------------------------------------------------------------- | |
12 |
|
12 | |||
13 | #----------------------------------------------------------------------------- |
|
13 | #----------------------------------------------------------------------------- | |
14 | # Imports |
|
14 | # Imports | |
15 | #----------------------------------------------------------------------------- |
|
15 | #----------------------------------------------------------------------------- | |
16 |
|
16 | |||
17 | import os |
|
17 | import os | |
18 | import re |
|
18 | import re | |
19 | import sys |
|
19 | import sys | |
20 | import signal |
|
20 | import signal | |
21 | import tempfile |
|
21 | import tempfile | |
22 | pjoin = os.path.join |
|
22 | pjoin = os.path.join | |
23 |
|
23 | |||
24 | from twisted.internet import reactor, defer |
|
24 | from twisted.internet import reactor, defer | |
25 | from twisted.internet.protocol import ProcessProtocol |
|
25 | from twisted.internet.protocol import ProcessProtocol | |
26 | from twisted.internet.error import ProcessDone, ProcessTerminated |
|
26 | from twisted.internet.error import ProcessDone, ProcessTerminated | |
27 | from twisted.internet.utils import getProcessOutput |
|
27 | from twisted.internet.utils import getProcessOutput | |
28 | from twisted.python import failure, log |
|
28 | from twisted.python import failure, log | |
29 |
|
29 | |||
30 | from IPython.external import argparse |
|
30 | from IPython.external import argparse | |
31 | from IPython.external import Itpl |
|
31 | from IPython.external import Itpl | |
32 | from IPython.genutils import ( |
|
32 | from IPython.genutils import ( | |
33 | get_ipython_dir, |
|
33 | get_ipython_dir, | |
34 | get_log_dir, |
|
34 | get_log_dir, | |
35 | get_security_dir, |
|
35 | get_security_dir, | |
36 | num_cpus |
|
36 | num_cpus | |
37 | ) |
|
37 | ) | |
38 | from IPython.kernel.fcutil import have_crypto |
|
38 | from IPython.kernel.fcutil import have_crypto | |
39 |
|
39 | |||
40 | # Create various ipython directories if they don't exist. |
|
40 | # Create various ipython directories if they don't exist. | |
41 | # This must be done before IPython.kernel.config is imported. |
|
41 | # This must be done before IPython.kernel.config is imported. | |
42 | from IPython.iplib import user_setup |
|
42 | from IPython.iplib import user_setup | |
43 | if os.name == 'posix': |
|
43 | if os.name == 'posix': | |
44 | rc_suffix = '' |
|
44 | rc_suffix = '' | |
45 | else: |
|
45 | else: | |
46 | rc_suffix = '.ini' |
|
46 | rc_suffix = '.ini' | |
47 | user_setup(get_ipython_dir(), rc_suffix, mode='install', interactive=False) |
|
47 | user_setup(get_ipython_dir(), rc_suffix, mode='install', interactive=False) | |
48 | get_log_dir() |
|
48 | get_log_dir() | |
49 | get_security_dir() |
|
49 | get_security_dir() | |
50 |
|
50 | |||
51 | from IPython.kernel.config import config_manager as kernel_config_manager |
|
51 | from IPython.kernel.config import config_manager as kernel_config_manager | |
52 | from IPython.kernel.error import SecurityError, FileTimeoutError |
|
52 | from IPython.kernel.error import SecurityError, FileTimeoutError | |
53 | from IPython.kernel.fcutil import have_crypto |
|
53 | from IPython.kernel.fcutil import have_crypto | |
54 | from IPython.kernel.twistedutil import gatherBoth, wait_for_file |
|
54 | from IPython.kernel.twistedutil import gatherBoth, wait_for_file | |
55 | from IPython.kernel.util import printer |
|
55 | from IPython.kernel.util import printer | |
56 |
|
56 | |||
57 | #----------------------------------------------------------------------------- |
|
57 | #----------------------------------------------------------------------------- | |
58 | # General process handling code |
|
58 | # General process handling code | |
59 | #----------------------------------------------------------------------------- |
|
59 | #----------------------------------------------------------------------------- | |
60 |
|
60 | |||
61 |
|
61 | |||
62 | class ProcessStateError(Exception): |
|
62 | class ProcessStateError(Exception): | |
63 | pass |
|
63 | pass | |
64 |
|
64 | |||
65 | class UnknownStatus(Exception): |
|
65 | class UnknownStatus(Exception): | |
66 | pass |
|
66 | pass | |
67 |
|
67 | |||
68 | class LauncherProcessProtocol(ProcessProtocol): |
|
68 | class LauncherProcessProtocol(ProcessProtocol): | |
69 | """ |
|
69 | """ | |
70 | A ProcessProtocol to go with the ProcessLauncher. |
|
70 | A ProcessProtocol to go with the ProcessLauncher. | |
71 | """ |
|
71 | """ | |
72 | def __init__(self, process_launcher): |
|
72 | def __init__(self, process_launcher): | |
73 | self.process_launcher = process_launcher |
|
73 | self.process_launcher = process_launcher | |
74 |
|
74 | |||
75 | def connectionMade(self): |
|
75 | def connectionMade(self): | |
76 | self.process_launcher.fire_start_deferred(self.transport.pid) |
|
76 | self.process_launcher.fire_start_deferred(self.transport.pid) | |
77 |
|
77 | |||
78 | def processEnded(self, status): |
|
78 | def processEnded(self, status): | |
79 | value = status.value |
|
79 | value = status.value | |
80 | if isinstance(value, ProcessDone): |
|
80 | if isinstance(value, ProcessDone): | |
81 | self.process_launcher.fire_stop_deferred(0) |
|
81 | self.process_launcher.fire_stop_deferred(0) | |
82 | elif isinstance(value, ProcessTerminated): |
|
82 | elif isinstance(value, ProcessTerminated): | |
83 | self.process_launcher.fire_stop_deferred( |
|
83 | self.process_launcher.fire_stop_deferred( | |
84 | {'exit_code':value.exitCode, |
|
84 | {'exit_code':value.exitCode, | |
85 | 'signal':value.signal, |
|
85 | 'signal':value.signal, | |
86 | 'status':value.status |
|
86 | 'status':value.status | |
87 | } |
|
87 | } | |
88 | ) |
|
88 | ) | |
89 | else: |
|
89 | else: | |
90 | raise UnknownStatus("unknown exit status, this is probably a bug in Twisted") |
|
90 | raise UnknownStatus("unknown exit status, this is probably a bug in Twisted") | |
91 |
|
91 | |||
92 | def outReceived(self, data): |
|
92 | def outReceived(self, data): | |
93 | log.msg(data) |
|
93 | log.msg(data) | |
94 |
|
94 | |||
95 | def errReceived(self, data): |
|
95 | def errReceived(self, data): | |
96 | log.err(data) |
|
96 | log.err(data) | |
97 |
|
97 | |||
98 | class ProcessLauncher(object): |
|
98 | class ProcessLauncher(object): | |
99 | """ |
|
99 | """ | |
100 | Start and stop an external process in an asynchronous manner. |
|
100 | Start and stop an external process in an asynchronous manner. | |
101 |
|
101 | |||
102 | Currently this uses deferreds to notify other parties of process state |
|
102 | Currently this uses deferreds to notify other parties of process state | |
103 | changes. This is an awkward design and should be moved to using |
|
103 | changes. This is an awkward design and should be moved to using | |
104 | a formal NotificationCenter. |
|
104 | a formal NotificationCenter. | |
105 | """ |
|
105 | """ | |
106 | def __init__(self, cmd_and_args): |
|
106 | def __init__(self, cmd_and_args): | |
107 | self.cmd = cmd_and_args[0] |
|
107 | self.cmd = cmd_and_args[0] | |
108 | self.args = cmd_and_args |
|
108 | self.args = cmd_and_args | |
109 | self._reset() |
|
109 | self._reset() | |
110 |
|
110 | |||
111 | def _reset(self): |
|
111 | def _reset(self): | |
112 | self.process_protocol = None |
|
112 | self.process_protocol = None | |
113 | self.pid = None |
|
113 | self.pid = None | |
114 | self.start_deferred = None |
|
114 | self.start_deferred = None | |
115 | self.stop_deferreds = [] |
|
115 | self.stop_deferreds = [] | |
116 | self.state = 'before' # before, running, or after |
|
116 | self.state = 'before' # before, running, or after | |
117 |
|
117 | |||
118 | @property |
|
118 | @property | |
119 | def running(self): |
|
119 | def running(self): | |
120 | if self.state == 'running': |
|
120 | if self.state == 'running': | |
121 | return True |
|
121 | return True | |
122 | else: |
|
122 | else: | |
123 | return False |
|
123 | return False | |
124 |
|
124 | |||
125 | def fire_start_deferred(self, pid): |
|
125 | def fire_start_deferred(self, pid): | |
126 | self.pid = pid |
|
126 | self.pid = pid | |
127 | self.state = 'running' |
|
127 | self.state = 'running' | |
128 | log.msg('Process %r has started with pid=%i' % (self.args, pid)) |
|
128 | log.msg('Process %r has started with pid=%i' % (self.args, pid)) | |
129 | self.start_deferred.callback(pid) |
|
129 | self.start_deferred.callback(pid) | |
130 |
|
130 | |||
131 | def start(self): |
|
131 | def start(self): | |
132 | if self.state == 'before': |
|
132 | if self.state == 'before': | |
133 | self.process_protocol = LauncherProcessProtocol(self) |
|
133 | self.process_protocol = LauncherProcessProtocol(self) | |
134 | self.start_deferred = defer.Deferred() |
|
134 | self.start_deferred = defer.Deferred() | |
135 | self.process_transport = reactor.spawnProcess( |
|
135 | self.process_transport = reactor.spawnProcess( | |
136 | self.process_protocol, |
|
136 | self.process_protocol, | |
137 | self.cmd, |
|
137 | self.cmd, | |
138 | self.args, |
|
138 | self.args, | |
139 | env=os.environ |
|
139 | env=os.environ | |
140 | ) |
|
140 | ) | |
141 | return self.start_deferred |
|
141 | return self.start_deferred | |
142 | else: |
|
142 | else: | |
143 | s = 'the process has already been started and has state: %r' % \ |
|
143 | s = 'the process has already been started and has state: %r' % \ | |
144 | self.state |
|
144 | self.state | |
145 | return defer.fail(ProcessStateError(s)) |
|
145 | return defer.fail(ProcessStateError(s)) | |
146 |
|
146 | |||
147 | def get_stop_deferred(self): |
|
147 | def get_stop_deferred(self): | |
148 | if self.state == 'running' or self.state == 'before': |
|
148 | if self.state == 'running' or self.state == 'before': | |
149 | d = defer.Deferred() |
|
149 | d = defer.Deferred() | |
150 | self.stop_deferreds.append(d) |
|
150 | self.stop_deferreds.append(d) | |
151 | return d |
|
151 | return d | |
152 | else: |
|
152 | else: | |
153 | s = 'this process is already complete' |
|
153 | s = 'this process is already complete' | |
154 | return defer.fail(ProcessStateError(s)) |
|
154 | return defer.fail(ProcessStateError(s)) | |
155 |
|
155 | |||
156 | def fire_stop_deferred(self, exit_code): |
|
156 | def fire_stop_deferred(self, exit_code): | |
157 | log.msg('Process %r has stopped with %r' % (self.args, exit_code)) |
|
157 | log.msg('Process %r has stopped with %r' % (self.args, exit_code)) | |
158 | self.state = 'after' |
|
158 | self.state = 'after' | |
159 | for d in self.stop_deferreds: |
|
159 | for d in self.stop_deferreds: | |
160 | d.callback(exit_code) |
|
160 | d.callback(exit_code) | |
161 |
|
161 | |||
162 | def signal(self, sig): |
|
162 | def signal(self, sig): | |
163 | """ |
|
163 | """ | |
164 | Send a signal to the process. |
|
164 | Send a signal to the process. | |
165 |
|
165 | |||
166 | The argument sig can be ('KILL','INT', etc.) or any signal number. |
|
166 | The argument sig can be ('KILL','INT', etc.) or any signal number. | |
167 | """ |
|
167 | """ | |
168 | if self.state == 'running': |
|
168 | if self.state == 'running': | |
169 | self.process_transport.signalProcess(sig) |
|
169 | self.process_transport.signalProcess(sig) | |
170 |
|
170 | |||
171 | # def __del__(self): |
|
171 | # def __del__(self): | |
172 | # self.signal('KILL') |
|
172 | # self.signal('KILL') | |
173 |
|
173 | |||
174 | def interrupt_then_kill(self, delay=1.0): |
|
174 | def interrupt_then_kill(self, delay=1.0): | |
175 | self.signal('INT') |
|
175 | self.signal('INT') | |
176 | reactor.callLater(delay, self.signal, 'KILL') |
|
176 | reactor.callLater(delay, self.signal, 'KILL') | |
177 |
|
177 | |||
178 |
|
178 | |||
179 | #----------------------------------------------------------------------------- |
|
179 | #----------------------------------------------------------------------------- | |
180 | # Code for launching controller and engines |
|
180 | # Code for launching controller and engines | |
181 | #----------------------------------------------------------------------------- |
|
181 | #----------------------------------------------------------------------------- | |
182 |
|
182 | |||
183 |
|
183 | |||
184 | class ControllerLauncher(ProcessLauncher): |
|
184 | class ControllerLauncher(ProcessLauncher): | |
185 |
|
185 | |||
186 | def __init__(self, extra_args=None): |
|
186 | def __init__(self, extra_args=None): | |
187 | if sys.platform == 'win32': |
|
187 | if sys.platform == 'win32': | |
188 | # This logic is needed because the ipcontroller script doesn't |
|
188 | # This logic is needed because the ipcontroller script doesn't | |
189 | # always get installed in the same way or in the same location. |
|
189 | # always get installed in the same way or in the same location. | |
190 | from IPython.kernel.scripts import ipcontroller |
|
190 | from IPython.kernel.scripts import ipcontroller | |
191 | script_location = ipcontroller.__file__.replace('.pyc', '.py') |
|
191 | script_location = ipcontroller.__file__.replace('.pyc', '.py') | |
192 | # The -u option here turns on unbuffered output, which is required |
|
192 | # The -u option here turns on unbuffered output, which is required | |
193 | # on Win32 to prevent wierd conflict and problems with Twisted. |
|
193 | # on Win32 to prevent wierd conflict and problems with Twisted. | |
194 | # Also, use sys.executable to make sure we are picking up the |
|
194 | # Also, use sys.executable to make sure we are picking up the | |
195 | # right python exe. |
|
195 | # right python exe. | |
196 | args = [sys.executable, '-u', script_location] |
|
196 | args = [sys.executable, '-u', script_location] | |
197 | else: |
|
197 | else: | |
198 | args = ['ipcontroller'] |
|
198 | args = ['ipcontroller'] | |
199 | self.extra_args = extra_args |
|
199 | self.extra_args = extra_args | |
200 | if extra_args is not None: |
|
200 | if extra_args is not None: | |
201 | args.extend(extra_args) |
|
201 | args.extend(extra_args) | |
202 |
|
202 | |||
203 | ProcessLauncher.__init__(self, args) |
|
203 | ProcessLauncher.__init__(self, args) | |
204 |
|
204 | |||
205 |
|
205 | |||
206 | class EngineLauncher(ProcessLauncher): |
|
206 | class EngineLauncher(ProcessLauncher): | |
207 |
|
207 | |||
208 | def __init__(self, extra_args=None): |
|
208 | def __init__(self, extra_args=None): | |
209 | if sys.platform == 'win32': |
|
209 | if sys.platform == 'win32': | |
210 | # This logic is needed because the ipcontroller script doesn't |
|
210 | # This logic is needed because the ipcontroller script doesn't | |
211 | # always get installed in the same way or in the same location. |
|
211 | # always get installed in the same way or in the same location. | |
212 | from IPython.kernel.scripts import ipengine |
|
212 | from IPython.kernel.scripts import ipengine | |
213 | script_location = ipengine.__file__.replace('.pyc', '.py') |
|
213 | script_location = ipengine.__file__.replace('.pyc', '.py') | |
214 | # The -u option here turns on unbuffered output, which is required |
|
214 | # The -u option here turns on unbuffered output, which is required | |
215 | # on Win32 to prevent wierd conflict and problems with Twisted. |
|
215 | # on Win32 to prevent wierd conflict and problems with Twisted. | |
216 | # Also, use sys.executable to make sure we are picking up the |
|
216 | # Also, use sys.executable to make sure we are picking up the | |
217 | # right python exe. |
|
217 | # right python exe. | |
218 | args = [sys.executable, '-u', script_location] |
|
218 | args = [sys.executable, '-u', script_location] | |
219 | else: |
|
219 | else: | |
220 | args = ['ipengine'] |
|
220 | args = ['ipengine'] | |
221 | self.extra_args = extra_args |
|
221 | self.extra_args = extra_args | |
222 | if extra_args is not None: |
|
222 | if extra_args is not None: | |
223 | args.extend(extra_args) |
|
223 | args.extend(extra_args) | |
224 |
|
224 | |||
225 | ProcessLauncher.__init__(self, args) |
|
225 | ProcessLauncher.__init__(self, args) | |
226 |
|
226 | |||
227 |
|
227 | |||
228 | class LocalEngineSet(object): |
|
228 | class LocalEngineSet(object): | |
229 |
|
229 | |||
230 | def __init__(self, extra_args=None): |
|
230 | def __init__(self, extra_args=None): | |
231 | self.extra_args = extra_args |
|
231 | self.extra_args = extra_args | |
232 | self.launchers = [] |
|
232 | self.launchers = [] | |
233 |
|
233 | |||
234 | def start(self, n): |
|
234 | def start(self, n): | |
235 | dlist = [] |
|
235 | dlist = [] | |
236 | for i in range(n): |
|
236 | for i in range(n): | |
237 | print "starting engine:", i |
|
237 | print "starting engine:", i | |
238 | el = EngineLauncher(extra_args=self.extra_args) |
|
238 | el = EngineLauncher(extra_args=self.extra_args) | |
239 | d = el.start() |
|
239 | d = el.start() | |
240 | self.launchers.append(el) |
|
240 | self.launchers.append(el) | |
241 | dlist.append(d) |
|
241 | dlist.append(d) | |
242 | dfinal = gatherBoth(dlist, consumeErrors=True) |
|
242 | dfinal = gatherBoth(dlist, consumeErrors=True) | |
243 | dfinal.addCallback(self._handle_start) |
|
243 | dfinal.addCallback(self._handle_start) | |
244 | return dfinal |
|
244 | return dfinal | |
245 |
|
245 | |||
246 | def _handle_start(self, r): |
|
246 | def _handle_start(self, r): | |
247 | log.msg('Engines started with pids: %r' % r) |
|
247 | log.msg('Engines started with pids: %r' % r) | |
248 | return r |
|
248 | return r | |
249 |
|
249 | |||
250 | def _handle_stop(self, r): |
|
250 | def _handle_stop(self, r): | |
251 | log.msg('Engines received signal: %r' % r) |
|
251 | log.msg('Engines received signal: %r' % r) | |
252 | return r |
|
252 | return r | |
253 |
|
253 | |||
254 | def signal(self, sig): |
|
254 | def signal(self, sig): | |
255 | dlist = [] |
|
255 | dlist = [] | |
256 | for el in self.launchers: |
|
256 | for el in self.launchers: | |
257 | d = el.get_stop_deferred() |
|
257 | d = el.get_stop_deferred() | |
258 | dlist.append(d) |
|
258 | dlist.append(d) | |
259 | el.signal(sig) |
|
259 | el.signal(sig) | |
260 | dfinal = gatherBoth(dlist, consumeErrors=True) |
|
260 | dfinal = gatherBoth(dlist, consumeErrors=True) | |
261 | dfinal.addCallback(self._handle_stop) |
|
261 | dfinal.addCallback(self._handle_stop) | |
262 | return dfinal |
|
262 | return dfinal | |
263 |
|
263 | |||
264 | def interrupt_then_kill(self, delay=1.0): |
|
264 | def interrupt_then_kill(self, delay=1.0): | |
265 | dlist = [] |
|
265 | dlist = [] | |
266 | for el in self.launchers: |
|
266 | for el in self.launchers: | |
267 | d = el.get_stop_deferred() |
|
267 | d = el.get_stop_deferred() | |
268 | dlist.append(d) |
|
268 | dlist.append(d) | |
269 | el.interrupt_then_kill(delay) |
|
269 | el.interrupt_then_kill(delay) | |
270 | dfinal = gatherBoth(dlist, consumeErrors=True) |
|
270 | dfinal = gatherBoth(dlist, consumeErrors=True) | |
271 | dfinal.addCallback(self._handle_stop) |
|
271 | dfinal.addCallback(self._handle_stop) | |
272 | return dfinal |
|
272 | return dfinal | |
273 |
|
273 | |||
274 | class BatchEngineSet(object): |
|
274 | class BatchEngineSet(object): | |
275 |
|
275 | |||
276 | # Subclasses must fill these in. See PBSEngineSet/SGEEngineSet |
|
276 | # Subclasses must fill these in. See PBSEngineSet/SGEEngineSet | |
277 | name = '' |
|
277 | name = '' | |
278 | submit_command = '' |
|
278 | submit_command = '' | |
279 | delete_command = '' |
|
279 | delete_command = '' | |
280 | script_param_prefix = '' |
|
|||
281 | job_id_regexp = '' |
|
280 | job_id_regexp = '' | |
282 | job_array_regexp = '' |
|
281 | job_array_regexp = '' | |
|
282 | job_array_template = '' | |||
|
283 | queue_regexp = '' | |||
|
284 | queue_template = '' | |||
283 | default_template = '' |
|
285 | default_template = '' | |
284 |
|
286 | |||
285 | def __init__(self, template_file, **kwargs): |
|
287 | def __init__(self, template_file, queue, **kwargs): | |
286 | self.template_file = template_file |
|
288 | self.template_file = template_file | |
|
289 | self.queue = queue | |||
287 |
|
290 | |||
288 | def parse_job_id(self, output): |
|
291 | def parse_job_id(self, output): | |
289 | m = re.search(self.job_id_regexp, output) |
|
292 | m = re.search(self.job_id_regexp, output) | |
290 | if m is not None: |
|
293 | if m is not None: | |
291 | job_id = m.group() |
|
294 | job_id = m.group() | |
292 | else: |
|
295 | else: | |
293 | raise Exception("job id couldn't be determined: %s" % output) |
|
296 | raise Exception("job id couldn't be determined: %s" % output) | |
294 | self.job_id = job_id |
|
297 | self.job_id = job_id | |
295 | log.msg('Job started with job id: %r' % job_id) |
|
298 | log.msg('Job started with job id: %r' % job_id) | |
296 | return job_id |
|
299 | return job_id | |
297 |
|
300 | |||
298 | def handle_error(self, f): |
|
301 | def handle_error(self, f): | |
299 | f.printTraceback() |
|
302 | f.printTraceback() | |
300 | f.raiseException() |
|
303 | f.raiseException() | |
301 |
|
304 | |||
302 | def start(self, n): |
|
305 | def start(self, n): | |
303 | log.msg("starting %d engines" % n) |
|
306 | log.msg("starting %d engines" % n) | |
304 | self._temp_file = tempfile.NamedTemporaryFile() |
|
307 | self._temp_file = tempfile.NamedTemporaryFile() | |
305 | regex = re.compile(self.job_array_regexp) |
|
|||
306 | if self.template_file: |
|
308 | if self.template_file: | |
307 | log.msg("Using %s script %s" % (self.name, self.template_file)) |
|
309 | log.msg("Using %s script %s" % (self.name, self.template_file)) | |
308 | contents = open(self.template_file, 'r').read() |
|
310 | contents = open(self.template_file, 'r').read() | |
|
311 | new_script = contents | |||
|
312 | regex = re.compile(self.job_array_regexp) | |||
309 | if not regex.search(contents): |
|
313 | if not regex.search(contents): | |
310 | log.msg("adding job array settings to %s script" % self.name) |
|
314 | log.msg("adding job array settings to %s script" % self.name) | |
311 | contents = ("%s -t 1-%d\n" % (self.script_param_prefix,n)) + contents |
|
315 | new_script = self.job_array_template % n +'\n' + new_script | |
312 | self._temp_file.write(contents) |
|
316 | print self.queue_regexp | |
|
317 | regex = re.compile(self.queue_regexp) | |||
|
318 | print regex.search(contents) | |||
|
319 | if self.queue and not regex.search(contents): | |||
|
320 | log.msg("adding queue settings to %s script" % self.name) | |||
|
321 | new_script = self.queue_template % self.queue + '\n' + new_script | |||
|
322 | if new_script != contents: | |||
|
323 | self._temp_file.write(new_script) | |||
313 | self.template_file = self._temp_file.name |
|
324 | self.template_file = self._temp_file.name | |
314 | else: |
|
325 | else: | |
|
326 | default_script = self.default_template % n | |||
|
327 | if self.queue: | |||
|
328 | default_script = self.queue_template % self.queue + \ | |||
|
329 | '\n' + default_script | |||
315 | log.msg("using default ipengine %s script: \n%s" % |
|
330 | log.msg("using default ipengine %s script: \n%s" % | |
316 |
(self.name, |
|
331 | (self.name, default_script)) | |
317 |
self._temp_file.file.write( |
|
332 | self._temp_file.file.write(default_script) | |
318 | self.template_file = self._temp_file.name |
|
333 | self.template_file = self._temp_file.name | |
319 | self._temp_file.file.flush() |
|
334 | self._temp_file.file.flush() | |
320 | d = getProcessOutput(self.submit_command, |
|
335 | d = getProcessOutput(self.submit_command, | |
321 | [self.template_file], |
|
336 | [self.template_file], | |
322 | env=os.environ) |
|
337 | env=os.environ) | |
323 | d.addCallback(self.parse_job_id) |
|
338 | d.addCallback(self.parse_job_id) | |
324 | d.addErrback(self.handle_error) |
|
339 | d.addErrback(self.handle_error) | |
325 | return d |
|
340 | return d | |
326 |
|
341 | |||
327 | def kill(self): |
|
342 | def kill(self): | |
328 | d = getProcessOutput(self.delete_command, |
|
343 | d = getProcessOutput(self.delete_command, | |
329 | [self.job_id],env=os.environ) |
|
344 | [self.job_id],env=os.environ) | |
330 | return d |
|
345 | return d | |
331 |
|
346 | |||
332 | class PBSEngineSet(BatchEngineSet): |
|
347 | class PBSEngineSet(BatchEngineSet): | |
333 |
|
348 | |||
334 | name = 'PBS' |
|
349 | name = 'PBS' | |
335 | submit_command = 'qsub' |
|
350 | submit_command = 'qsub' | |
336 | delete_command = 'qdel' |
|
351 | delete_command = 'qdel' | |
337 | script_param_prefix = "#PBS" |
|
|||
338 | job_id_regexp = '\d+' |
|
352 | job_id_regexp = '\d+' | |
339 | job_array_regexp = '#PBS[ \t]+-t[ \t]+\d+' |
|
353 | job_array_regexp = '#PBS[ \t]+-t[ \t]+\d+' | |
|
354 | job_array_template = '#PBS -t 1-%d' | |||
|
355 | queue_regexp = '#PBS[ \t]+-q[ \t]+\w+' | |||
|
356 | queue_template = '#PBS -q %s' | |||
340 | default_template="""#PBS -V |
|
357 | default_template="""#PBS -V | |
341 | #PBS -t 1-%d |
|
358 | #PBS -t 1-%d | |
342 | #PBS -N ipengine |
|
359 | #PBS -N ipengine | |
343 | eid=$(($PBS_ARRAYID - 1)) |
|
360 | eid=$(($PBS_ARRAYID - 1)) | |
344 | ipengine --logfile=ipengine${eid}.log |
|
361 | ipengine --logfile=ipengine${eid}.log | |
345 | """ |
|
362 | """ | |
346 |
|
363 | |||
347 | class SGEEngineSet(PBSEngineSet): |
|
364 | class SGEEngineSet(PBSEngineSet): | |
348 |
|
365 | |||
349 | name = 'SGE' |
|
366 | name = 'SGE' | |
350 | script_param_prefix = "#$" |
|
|||
351 | job_array_regexp = '#\$[ \t]+-t[ \t]+\d+' |
|
367 | job_array_regexp = '#\$[ \t]+-t[ \t]+\d+' | |
|
368 | job_array_template = '#$ -t 1-%d' | |||
|
369 | queue_regexp = '#\$[ \t]+-q[ \t]+\w+' | |||
|
370 | queue_template = '#$ -q %s' | |||
352 | default_template="""#$ -V |
|
371 | default_template="""#$ -V | |
353 | #$ -t 1-%d |
|
372 | #$ -t 1-%d | |
354 | #$ -N ipengine |
|
373 | #$ -N ipengine | |
355 | eid=$(($SGE_TASK_ID - 1)) |
|
374 | eid=$(($SGE_TASK_ID - 1)) | |
356 | ipengine --logfile=ipengine${eid}.log |
|
375 | ipengine --logfile=ipengine${eid}.log | |
357 | """ |
|
376 | """ | |
358 |
|
377 | |||
359 | class LSFEngineSet(PBSEngineSet): |
|
378 | class LSFEngineSet(PBSEngineSet): | |
360 |
|
379 | |||
361 | name = 'LSF' |
|
380 | name = 'LSF' | |
362 | submit_command = 'bsub' |
|
381 | submit_command = 'bsub' | |
363 | delete_command = 'bkill' |
|
382 | delete_command = 'bkill' | |
364 | script_param_prefix = "#BSUB" |
|
383 | job_array_regexp = '#BSUB[ \t]-J+\w+\[\d+-\d+\]' | |
365 | job_array_regexp = '#BSUB[ \t]+\w+\[\d+-\d+\]' |
|
384 | job_array_template = '#BSUB -J ipengine[1-%d]' | |
366 | default_template="""#BSUB ipengine[1-%d] |
|
385 | queue_regexp = '#BSUB[ \t]+-q[ \t]+\w+' | |
|
386 | queue_template = '#BSUB -q %s' | |||
|
387 | default_template="""#BSUB -J ipengine[1-%d] | |||
367 | eid=$(($LSB_JOBINDEX - 1)) |
|
388 | eid=$(($LSB_JOBINDEX - 1)) | |
368 | ipengine --logfile=ipengine${eid}.log |
|
389 | ipengine --logfile=ipengine${eid}.log | |
369 | """ |
|
390 | """ | |
370 |
|
391 | |||
371 | sshx_template="""#!/bin/sh |
|
392 | sshx_template="""#!/bin/sh | |
372 | "$@" &> /dev/null & |
|
393 | "$@" &> /dev/null & | |
373 | echo $! |
|
394 | echo $! | |
374 | """ |
|
395 | """ | |
375 |
|
396 | |||
376 | engine_killer_template="""#!/bin/sh |
|
397 | engine_killer_template="""#!/bin/sh | |
377 | ps -fu `whoami` | grep '[i]pengine' | awk '{print $2}' | xargs kill -TERM |
|
398 | ps -fu `whoami` | grep '[i]pengine' | awk '{print $2}' | xargs kill -TERM | |
378 | """ |
|
399 | """ | |
379 |
|
400 | |||
380 | class SSHEngineSet(object): |
|
401 | class SSHEngineSet(object): | |
381 | sshx_template=sshx_template |
|
402 | sshx_template=sshx_template | |
382 | engine_killer_template=engine_killer_template |
|
403 | engine_killer_template=engine_killer_template | |
383 |
|
404 | |||
384 | def __init__(self, engine_hosts, sshx=None, ipengine="ipengine"): |
|
405 | def __init__(self, engine_hosts, sshx=None, ipengine="ipengine"): | |
385 | """Start a controller on localhost and engines using ssh. |
|
406 | """Start a controller on localhost and engines using ssh. | |
386 |
|
407 | |||
387 | The engine_hosts argument is a dict with hostnames as keys and |
|
408 | The engine_hosts argument is a dict with hostnames as keys and | |
388 | the number of engine (int) as values. sshx is the name of a local |
|
409 | the number of engine (int) as values. sshx is the name of a local | |
389 | file that will be used to run remote commands. This file is used |
|
410 | file that will be used to run remote commands. This file is used | |
390 | to setup the environment properly. |
|
411 | to setup the environment properly. | |
391 | """ |
|
412 | """ | |
392 |
|
413 | |||
393 | self.temp_dir = tempfile.gettempdir() |
|
414 | self.temp_dir = tempfile.gettempdir() | |
394 | if sshx is not None: |
|
415 | if sshx is not None: | |
395 | self.sshx = sshx |
|
416 | self.sshx = sshx | |
396 | else: |
|
417 | else: | |
397 | # Write the sshx.sh file locally from our template. |
|
418 | # Write the sshx.sh file locally from our template. | |
398 | self.sshx = os.path.join( |
|
419 | self.sshx = os.path.join( | |
399 | self.temp_dir, |
|
420 | self.temp_dir, | |
400 | '%s-main-sshx.sh' % os.environ['USER'] |
|
421 | '%s-main-sshx.sh' % os.environ['USER'] | |
401 | ) |
|
422 | ) | |
402 | f = open(self.sshx, 'w') |
|
423 | f = open(self.sshx, 'w') | |
403 | f.writelines(self.sshx_template) |
|
424 | f.writelines(self.sshx_template) | |
404 | f.close() |
|
425 | f.close() | |
405 | self.engine_command = ipengine |
|
426 | self.engine_command = ipengine | |
406 | self.engine_hosts = engine_hosts |
|
427 | self.engine_hosts = engine_hosts | |
407 | # Write the engine killer script file locally from our template. |
|
428 | # Write the engine killer script file locally from our template. | |
408 | self.engine_killer = os.path.join( |
|
429 | self.engine_killer = os.path.join( | |
409 | self.temp_dir, |
|
430 | self.temp_dir, | |
410 | '%s-local-engine_killer.sh' % os.environ['USER'] |
|
431 | '%s-local-engine_killer.sh' % os.environ['USER'] | |
411 | ) |
|
432 | ) | |
412 | f = open(self.engine_killer, 'w') |
|
433 | f = open(self.engine_killer, 'w') | |
413 | f.writelines(self.engine_killer_template) |
|
434 | f.writelines(self.engine_killer_template) | |
414 | f.close() |
|
435 | f.close() | |
415 |
|
436 | |||
416 | def start(self, send_furl=False): |
|
437 | def start(self, send_furl=False): | |
417 | dlist = [] |
|
438 | dlist = [] | |
418 | for host in self.engine_hosts.keys(): |
|
439 | for host in self.engine_hosts.keys(): | |
419 | count = self.engine_hosts[host] |
|
440 | count = self.engine_hosts[host] | |
420 | d = self._start(host, count, send_furl) |
|
441 | d = self._start(host, count, send_furl) | |
421 | dlist.append(d) |
|
442 | dlist.append(d) | |
422 | return gatherBoth(dlist, consumeErrors=True) |
|
443 | return gatherBoth(dlist, consumeErrors=True) | |
423 |
|
444 | |||
424 | def _start(self, hostname, count=1, send_furl=False): |
|
445 | def _start(self, hostname, count=1, send_furl=False): | |
425 | if send_furl: |
|
446 | if send_furl: | |
426 | d = self._scp_furl(hostname) |
|
447 | d = self._scp_furl(hostname) | |
427 | else: |
|
448 | else: | |
428 | d = defer.succeed(None) |
|
449 | d = defer.succeed(None) | |
429 | d.addCallback(lambda r: self._scp_sshx(hostname)) |
|
450 | d.addCallback(lambda r: self._scp_sshx(hostname)) | |
430 | d.addCallback(lambda r: self._ssh_engine(hostname, count)) |
|
451 | d.addCallback(lambda r: self._ssh_engine(hostname, count)) | |
431 | return d |
|
452 | return d | |
432 |
|
453 | |||
433 | def _scp_furl(self, hostname): |
|
454 | def _scp_furl(self, hostname): | |
434 | scp_cmd = "scp ~/.ipython/security/ipcontroller-engine.furl %s:.ipython/security/" % (hostname) |
|
455 | scp_cmd = "scp ~/.ipython/security/ipcontroller-engine.furl %s:.ipython/security/" % (hostname) | |
435 | cmd_list = scp_cmd.split() |
|
456 | cmd_list = scp_cmd.split() | |
436 | cmd_list[1] = os.path.expanduser(cmd_list[1]) |
|
457 | cmd_list[1] = os.path.expanduser(cmd_list[1]) | |
437 | log.msg('Copying furl file: %s' % scp_cmd) |
|
458 | log.msg('Copying furl file: %s' % scp_cmd) | |
438 | d = getProcessOutput(cmd_list[0], cmd_list[1:], env=os.environ) |
|
459 | d = getProcessOutput(cmd_list[0], cmd_list[1:], env=os.environ) | |
439 | return d |
|
460 | return d | |
440 |
|
461 | |||
441 | def _scp_sshx(self, hostname): |
|
462 | def _scp_sshx(self, hostname): | |
442 | scp_cmd = "scp %s %s:%s/%s-sshx.sh" % ( |
|
463 | scp_cmd = "scp %s %s:%s/%s-sshx.sh" % ( | |
443 | self.sshx, hostname, |
|
464 | self.sshx, hostname, | |
444 | self.temp_dir, os.environ['USER'] |
|
465 | self.temp_dir, os.environ['USER'] | |
445 | ) |
|
466 | ) | |
446 |
|
467 | |||
447 | log.msg("Copying sshx: %s" % scp_cmd) |
|
468 | log.msg("Copying sshx: %s" % scp_cmd) | |
448 | sshx_scp = scp_cmd.split() |
|
469 | sshx_scp = scp_cmd.split() | |
449 | d = getProcessOutput(sshx_scp[0], sshx_scp[1:], env=os.environ) |
|
470 | d = getProcessOutput(sshx_scp[0], sshx_scp[1:], env=os.environ) | |
450 | return d |
|
471 | return d | |
451 |
|
472 | |||
452 | def _ssh_engine(self, hostname, count): |
|
473 | def _ssh_engine(self, hostname, count): | |
453 | exec_engine = "ssh %s sh %s/%s-sshx.sh %s" % ( |
|
474 | exec_engine = "ssh %s sh %s/%s-sshx.sh %s" % ( | |
454 | hostname, self.temp_dir, |
|
475 | hostname, self.temp_dir, | |
455 | os.environ['USER'], self.engine_command |
|
476 | os.environ['USER'], self.engine_command | |
456 | ) |
|
477 | ) | |
457 | cmds = exec_engine.split() |
|
478 | cmds = exec_engine.split() | |
458 | dlist = [] |
|
479 | dlist = [] | |
459 | log.msg("about to start engines...") |
|
480 | log.msg("about to start engines...") | |
460 | for i in range(count): |
|
481 | for i in range(count): | |
461 | log.msg('Starting engines: %s' % exec_engine) |
|
482 | log.msg('Starting engines: %s' % exec_engine) | |
462 | d = getProcessOutput(cmds[0], cmds[1:], env=os.environ) |
|
483 | d = getProcessOutput(cmds[0], cmds[1:], env=os.environ) | |
463 | dlist.append(d) |
|
484 | dlist.append(d) | |
464 | return gatherBoth(dlist, consumeErrors=True) |
|
485 | return gatherBoth(dlist, consumeErrors=True) | |
465 |
|
486 | |||
466 | def kill(self): |
|
487 | def kill(self): | |
467 | dlist = [] |
|
488 | dlist = [] | |
468 | for host in self.engine_hosts.keys(): |
|
489 | for host in self.engine_hosts.keys(): | |
469 | d = self._killall(host) |
|
490 | d = self._killall(host) | |
470 | dlist.append(d) |
|
491 | dlist.append(d) | |
471 | return gatherBoth(dlist, consumeErrors=True) |
|
492 | return gatherBoth(dlist, consumeErrors=True) | |
472 |
|
493 | |||
473 | def _killall(self, hostname): |
|
494 | def _killall(self, hostname): | |
474 | d = self._scp_engine_killer(hostname) |
|
495 | d = self._scp_engine_killer(hostname) | |
475 | d.addCallback(lambda r: self._ssh_kill(hostname)) |
|
496 | d.addCallback(lambda r: self._ssh_kill(hostname)) | |
476 | # d.addErrback(self._exec_err) |
|
497 | # d.addErrback(self._exec_err) | |
477 | return d |
|
498 | return d | |
478 |
|
499 | |||
479 | def _scp_engine_killer(self, hostname): |
|
500 | def _scp_engine_killer(self, hostname): | |
480 | scp_cmd = "scp %s %s:%s/%s-engine_killer.sh" % ( |
|
501 | scp_cmd = "scp %s %s:%s/%s-engine_killer.sh" % ( | |
481 | self.engine_killer, |
|
502 | self.engine_killer, | |
482 | hostname, |
|
503 | hostname, | |
483 | self.temp_dir, |
|
504 | self.temp_dir, | |
484 | os.environ['USER'] |
|
505 | os.environ['USER'] | |
485 | ) |
|
506 | ) | |
486 | cmds = scp_cmd.split() |
|
507 | cmds = scp_cmd.split() | |
487 | log.msg('Copying engine_killer: %s' % scp_cmd) |
|
508 | log.msg('Copying engine_killer: %s' % scp_cmd) | |
488 | d = getProcessOutput(cmds[0], cmds[1:], env=os.environ) |
|
509 | d = getProcessOutput(cmds[0], cmds[1:], env=os.environ) | |
489 | return d |
|
510 | return d | |
490 |
|
511 | |||
491 | def _ssh_kill(self, hostname): |
|
512 | def _ssh_kill(self, hostname): | |
492 | kill_cmd = "ssh %s sh %s/%s-engine_killer.sh" % ( |
|
513 | kill_cmd = "ssh %s sh %s/%s-engine_killer.sh" % ( | |
493 | hostname, |
|
514 | hostname, | |
494 | self.temp_dir, |
|
515 | self.temp_dir, | |
495 | os.environ['USER'] |
|
516 | os.environ['USER'] | |
496 | ) |
|
517 | ) | |
497 | log.msg('Killing engine: %s' % kill_cmd) |
|
518 | log.msg('Killing engine: %s' % kill_cmd) | |
498 | kill_cmd = kill_cmd.split() |
|
519 | kill_cmd = kill_cmd.split() | |
499 | d = getProcessOutput(kill_cmd[0], kill_cmd[1:], env=os.environ) |
|
520 | d = getProcessOutput(kill_cmd[0], kill_cmd[1:], env=os.environ) | |
500 | return d |
|
521 | return d | |
501 |
|
522 | |||
502 | def _exec_err(self, r): |
|
523 | def _exec_err(self, r): | |
503 | log.msg(r) |
|
524 | log.msg(r) | |
504 |
|
525 | |||
505 | #----------------------------------------------------------------------------- |
|
526 | #----------------------------------------------------------------------------- | |
506 | # Main functions for the different types of clusters |
|
527 | # Main functions for the different types of clusters | |
507 | #----------------------------------------------------------------------------- |
|
528 | #----------------------------------------------------------------------------- | |
508 |
|
529 | |||
509 | # TODO: |
|
530 | # TODO: | |
510 | # The logic in these codes should be moved into classes like LocalCluster |
|
531 | # The logic in these codes should be moved into classes like LocalCluster | |
511 | # MpirunCluster, PBSCluster, etc. This would remove alot of the duplications. |
|
532 | # MpirunCluster, PBSCluster, etc. This would remove alot of the duplications. | |
512 | # The main functions should then just parse the command line arguments, create |
|
533 | # The main functions should then just parse the command line arguments, create | |
513 | # the appropriate class and call a 'start' method. |
|
534 | # the appropriate class and call a 'start' method. | |
514 |
|
535 | |||
515 |
|
536 | |||
516 | def check_security(args, cont_args): |
|
537 | def check_security(args, cont_args): | |
517 | """Check to see if we should run with SSL support.""" |
|
538 | """Check to see if we should run with SSL support.""" | |
518 | if (not args.x or not args.y) and not have_crypto: |
|
539 | if (not args.x or not args.y) and not have_crypto: | |
519 | log.err(""" |
|
540 | log.err(""" | |
520 | OpenSSL/pyOpenSSL is not available, so we can't run in secure mode. |
|
541 | OpenSSL/pyOpenSSL is not available, so we can't run in secure mode. | |
521 | Try running ipcluster with the -xy flags: ipcluster local -xy -n 4""") |
|
542 | Try running ipcluster with the -xy flags: ipcluster local -xy -n 4""") | |
522 | reactor.stop() |
|
543 | reactor.stop() | |
523 | return False |
|
544 | return False | |
524 | if args.x: |
|
545 | if args.x: | |
525 | cont_args.append('-x') |
|
546 | cont_args.append('-x') | |
526 | if args.y: |
|
547 | if args.y: | |
527 | cont_args.append('-y') |
|
548 | cont_args.append('-y') | |
528 | return True |
|
549 | return True | |
529 |
|
550 | |||
530 |
|
551 | |||
531 | def check_reuse(args, cont_args): |
|
552 | def check_reuse(args, cont_args): | |
532 | """Check to see if we should try to resuse FURL files.""" |
|
553 | """Check to see if we should try to resuse FURL files.""" | |
533 | if args.r: |
|
554 | if args.r: | |
534 | cont_args.append('-r') |
|
555 | cont_args.append('-r') | |
535 | if args.client_port == 0 or args.engine_port == 0: |
|
556 | if args.client_port == 0 or args.engine_port == 0: | |
536 | log.err(""" |
|
557 | log.err(""" | |
537 | To reuse FURL files, you must also set the client and engine ports using |
|
558 | To reuse FURL files, you must also set the client and engine ports using | |
538 | the --client-port and --engine-port options.""") |
|
559 | the --client-port and --engine-port options.""") | |
539 | reactor.stop() |
|
560 | reactor.stop() | |
540 | return False |
|
561 | return False | |
541 | cont_args.append('--client-port=%i' % args.client_port) |
|
562 | cont_args.append('--client-port=%i' % args.client_port) | |
542 | cont_args.append('--engine-port=%i' % args.engine_port) |
|
563 | cont_args.append('--engine-port=%i' % args.engine_port) | |
543 | return True |
|
564 | return True | |
544 |
|
565 | |||
545 |
|
566 | |||
546 | def _err_and_stop(f): |
|
567 | def _err_and_stop(f): | |
547 | """Errback to log a failure and halt the reactor on a fatal error.""" |
|
568 | """Errback to log a failure and halt the reactor on a fatal error.""" | |
548 | log.err(f) |
|
569 | log.err(f) | |
549 | reactor.stop() |
|
570 | reactor.stop() | |
550 |
|
571 | |||
551 |
|
572 | |||
552 | def _delay_start(cont_pid, start_engines, furl_file, reuse): |
|
573 | def _delay_start(cont_pid, start_engines, furl_file, reuse): | |
553 | """Wait for controller to create FURL files and the start the engines.""" |
|
574 | """Wait for controller to create FURL files and the start the engines.""" | |
554 | if not reuse: |
|
575 | if not reuse: | |
555 | if os.path.isfile(furl_file): |
|
576 | if os.path.isfile(furl_file): | |
556 | os.unlink(furl_file) |
|
577 | os.unlink(furl_file) | |
557 | log.msg('Waiting for controller to finish starting...') |
|
578 | log.msg('Waiting for controller to finish starting...') | |
558 | d = wait_for_file(furl_file, delay=0.2, max_tries=50) |
|
579 | d = wait_for_file(furl_file, delay=0.2, max_tries=50) | |
559 | d.addCallback(lambda _: log.msg('Controller started')) |
|
580 | d.addCallback(lambda _: log.msg('Controller started')) | |
560 | d.addCallback(lambda _: start_engines(cont_pid)) |
|
581 | d.addCallback(lambda _: start_engines(cont_pid)) | |
561 | return d |
|
582 | return d | |
562 |
|
583 | |||
563 |
|
584 | |||
564 | def main_local(args): |
|
585 | def main_local(args): | |
565 | cont_args = [] |
|
586 | cont_args = [] | |
566 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) |
|
587 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) | |
567 |
|
588 | |||
568 | # Check security settings before proceeding |
|
589 | # Check security settings before proceeding | |
569 | if not check_security(args, cont_args): |
|
590 | if not check_security(args, cont_args): | |
570 | return |
|
591 | return | |
571 |
|
592 | |||
572 | # See if we are reusing FURL files |
|
593 | # See if we are reusing FURL files | |
573 | if not check_reuse(args, cont_args): |
|
594 | if not check_reuse(args, cont_args): | |
574 | return |
|
595 | return | |
575 |
|
596 | |||
576 | cl = ControllerLauncher(extra_args=cont_args) |
|
597 | cl = ControllerLauncher(extra_args=cont_args) | |
577 | dstart = cl.start() |
|
598 | dstart = cl.start() | |
578 | def start_engines(cont_pid): |
|
599 | def start_engines(cont_pid): | |
579 | engine_args = [] |
|
600 | engine_args = [] | |
580 | engine_args.append('--logfile=%s' % \ |
|
601 | engine_args.append('--logfile=%s' % \ | |
581 | pjoin(args.logdir,'ipengine%s-' % cont_pid)) |
|
602 | pjoin(args.logdir,'ipengine%s-' % cont_pid)) | |
582 | eset = LocalEngineSet(extra_args=engine_args) |
|
603 | eset = LocalEngineSet(extra_args=engine_args) | |
583 | def shutdown(signum, frame): |
|
604 | def shutdown(signum, frame): | |
584 | log.msg('Stopping local cluster') |
|
605 | log.msg('Stopping local cluster') | |
585 | # We are still playing with the times here, but these seem |
|
606 | # We are still playing with the times here, but these seem | |
586 | # to be reliable in allowing everything to exit cleanly. |
|
607 | # to be reliable in allowing everything to exit cleanly. | |
587 | eset.interrupt_then_kill(0.5) |
|
608 | eset.interrupt_then_kill(0.5) | |
588 | cl.interrupt_then_kill(0.5) |
|
609 | cl.interrupt_then_kill(0.5) | |
589 | reactor.callLater(1.0, reactor.stop) |
|
610 | reactor.callLater(1.0, reactor.stop) | |
590 | signal.signal(signal.SIGINT,shutdown) |
|
611 | signal.signal(signal.SIGINT,shutdown) | |
591 | d = eset.start(args.n) |
|
612 | d = eset.start(args.n) | |
592 | return d |
|
613 | return d | |
593 | config = kernel_config_manager.get_config_obj() |
|
614 | config = kernel_config_manager.get_config_obj() | |
594 | furl_file = config['controller']['engine_furl_file'] |
|
615 | furl_file = config['controller']['engine_furl_file'] | |
595 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) |
|
616 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) | |
596 | dstart.addErrback(_err_and_stop) |
|
617 | dstart.addErrback(_err_and_stop) | |
597 |
|
618 | |||
598 |
|
619 | |||
599 | def main_mpi(args): |
|
620 | def main_mpi(args): | |
600 | cont_args = [] |
|
621 | cont_args = [] | |
601 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) |
|
622 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) | |
602 |
|
623 | |||
603 | # Check security settings before proceeding |
|
624 | # Check security settings before proceeding | |
604 | if not check_security(args, cont_args): |
|
625 | if not check_security(args, cont_args): | |
605 | return |
|
626 | return | |
606 |
|
627 | |||
607 | # See if we are reusing FURL files |
|
628 | # See if we are reusing FURL files | |
608 | if not check_reuse(args, cont_args): |
|
629 | if not check_reuse(args, cont_args): | |
609 | return |
|
630 | return | |
610 |
|
631 | |||
611 | cl = ControllerLauncher(extra_args=cont_args) |
|
632 | cl = ControllerLauncher(extra_args=cont_args) | |
612 | dstart = cl.start() |
|
633 | dstart = cl.start() | |
613 | def start_engines(cont_pid): |
|
634 | def start_engines(cont_pid): | |
614 | raw_args = [args.cmd] |
|
635 | raw_args = [args.cmd] | |
615 | raw_args.extend(['-n',str(args.n)]) |
|
636 | raw_args.extend(['-n',str(args.n)]) | |
616 | raw_args.append('ipengine') |
|
637 | raw_args.append('ipengine') | |
617 | raw_args.append('-l') |
|
638 | raw_args.append('-l') | |
618 | raw_args.append(pjoin(args.logdir,'ipengine%s-' % cont_pid)) |
|
639 | raw_args.append(pjoin(args.logdir,'ipengine%s-' % cont_pid)) | |
619 | if args.mpi: |
|
640 | if args.mpi: | |
620 | raw_args.append('--mpi=%s' % args.mpi) |
|
641 | raw_args.append('--mpi=%s' % args.mpi) | |
621 | eset = ProcessLauncher(raw_args) |
|
642 | eset = ProcessLauncher(raw_args) | |
622 | def shutdown(signum, frame): |
|
643 | def shutdown(signum, frame): | |
623 | log.msg('Stopping local cluster') |
|
644 | log.msg('Stopping local cluster') | |
624 | # We are still playing with the times here, but these seem |
|
645 | # We are still playing with the times here, but these seem | |
625 | # to be reliable in allowing everything to exit cleanly. |
|
646 | # to be reliable in allowing everything to exit cleanly. | |
626 | eset.interrupt_then_kill(1.0) |
|
647 | eset.interrupt_then_kill(1.0) | |
627 | cl.interrupt_then_kill(1.0) |
|
648 | cl.interrupt_then_kill(1.0) | |
628 | reactor.callLater(2.0, reactor.stop) |
|
649 | reactor.callLater(2.0, reactor.stop) | |
629 | signal.signal(signal.SIGINT,shutdown) |
|
650 | signal.signal(signal.SIGINT,shutdown) | |
630 | d = eset.start() |
|
651 | d = eset.start() | |
631 | return d |
|
652 | return d | |
632 | config = kernel_config_manager.get_config_obj() |
|
653 | config = kernel_config_manager.get_config_obj() | |
633 | furl_file = config['controller']['engine_furl_file'] |
|
654 | furl_file = config['controller']['engine_furl_file'] | |
634 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) |
|
655 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) | |
635 | dstart.addErrback(_err_and_stop) |
|
656 | dstart.addErrback(_err_and_stop) | |
636 |
|
657 | |||
637 |
|
658 | |||
638 | def main_pbs(args): |
|
659 | def main_pbs(args): | |
639 | cont_args = [] |
|
660 | cont_args = [] | |
640 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) |
|
661 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) | |
641 |
|
662 | |||
642 | # Check security settings before proceeding |
|
663 | # Check security settings before proceeding | |
643 | if not check_security(args, cont_args): |
|
664 | if not check_security(args, cont_args): | |
644 | return |
|
665 | return | |
645 |
|
666 | |||
646 | # See if we are reusing FURL files |
|
667 | # See if we are reusing FURL files | |
647 | if not check_reuse(args, cont_args): |
|
668 | if not check_reuse(args, cont_args): | |
648 | return |
|
669 | return | |
649 |
|
670 | |||
650 | if args.pbsscript and not os.path.isfile(args.pbsscript): |
|
671 | if args.pbsscript and not os.path.isfile(args.pbsscript): | |
651 | log.err('PBS script does not exist: %s' % args.pbsscript) |
|
672 | log.err('PBS script does not exist: %s' % args.pbsscript) | |
652 | return |
|
673 | return | |
653 |
|
674 | |||
654 | cl = ControllerLauncher(extra_args=cont_args) |
|
675 | cl = ControllerLauncher(extra_args=cont_args) | |
655 | dstart = cl.start() |
|
676 | dstart = cl.start() | |
656 | def start_engines(r): |
|
677 | def start_engines(r): | |
657 | pbs_set = PBSEngineSet(args.pbsscript) |
|
678 | pbs_set = PBSEngineSet(args.pbsscript, args.pbsqueue) | |
658 | def shutdown(signum, frame): |
|
679 | def shutdown(signum, frame): | |
659 | log.msg('Stopping PBS cluster') |
|
680 | log.msg('Stopping PBS cluster') | |
660 | d = pbs_set.kill() |
|
681 | d = pbs_set.kill() | |
661 | d.addBoth(lambda _: cl.interrupt_then_kill(1.0)) |
|
682 | d.addBoth(lambda _: cl.interrupt_then_kill(1.0)) | |
662 | d.addBoth(lambda _: reactor.callLater(2.0, reactor.stop)) |
|
683 | d.addBoth(lambda _: reactor.callLater(2.0, reactor.stop)) | |
663 | signal.signal(signal.SIGINT,shutdown) |
|
684 | signal.signal(signal.SIGINT,shutdown) | |
664 | d = pbs_set.start(args.n) |
|
685 | d = pbs_set.start(args.n) | |
665 | return d |
|
686 | return d | |
666 | config = kernel_config_manager.get_config_obj() |
|
687 | config = kernel_config_manager.get_config_obj() | |
667 | furl_file = config['controller']['engine_furl_file'] |
|
688 | furl_file = config['controller']['engine_furl_file'] | |
668 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) |
|
689 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) | |
669 | dstart.addErrback(_err_and_stop) |
|
690 | dstart.addErrback(_err_and_stop) | |
670 |
|
691 | |||
671 | def main_sge(args): |
|
692 | def main_sge(args): | |
672 | cont_args = [] |
|
693 | cont_args = [] | |
673 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) |
|
694 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) | |
674 |
|
695 | |||
675 | # Check security settings before proceeding |
|
696 | # Check security settings before proceeding | |
676 | if not check_security(args, cont_args): |
|
697 | if not check_security(args, cont_args): | |
677 | return |
|
698 | return | |
678 |
|
699 | |||
679 | # See if we are reusing FURL files |
|
700 | # See if we are reusing FURL files | |
680 | if not check_reuse(args, cont_args): |
|
701 | if not check_reuse(args, cont_args): | |
681 | return |
|
702 | return | |
682 |
|
703 | |||
683 | if args.sgescript and not os.path.isfile(args.sgescript): |
|
704 | if args.sgescript and not os.path.isfile(args.sgescript): | |
684 | log.err('SGE script does not exist: %s' % args.sgescript) |
|
705 | log.err('SGE script does not exist: %s' % args.sgescript) | |
685 | return |
|
706 | return | |
686 |
|
707 | |||
687 | cl = ControllerLauncher(extra_args=cont_args) |
|
708 | cl = ControllerLauncher(extra_args=cont_args) | |
688 | dstart = cl.start() |
|
709 | dstart = cl.start() | |
689 | def start_engines(r): |
|
710 | def start_engines(r): | |
690 | sge_set = SGEEngineSet(args.sgescript) |
|
711 | sge_set = SGEEngineSet(args.sgescript, args.sgequeue) | |
691 | def shutdown(signum, frame): |
|
712 | def shutdown(signum, frame): | |
692 | log.msg('Stopping sge cluster') |
|
713 | log.msg('Stopping sge cluster') | |
693 | d = sge_set.kill() |
|
714 | d = sge_set.kill() | |
694 | d.addBoth(lambda _: cl.interrupt_then_kill(1.0)) |
|
715 | d.addBoth(lambda _: cl.interrupt_then_kill(1.0)) | |
695 | d.addBoth(lambda _: reactor.callLater(2.0, reactor.stop)) |
|
716 | d.addBoth(lambda _: reactor.callLater(2.0, reactor.stop)) | |
696 | signal.signal(signal.SIGINT,shutdown) |
|
717 | signal.signal(signal.SIGINT,shutdown) | |
697 | d = sge_set.start(args.n) |
|
718 | d = sge_set.start(args.n) | |
698 | return d |
|
719 | return d | |
699 | config = kernel_config_manager.get_config_obj() |
|
720 | config = kernel_config_manager.get_config_obj() | |
700 | furl_file = config['controller']['engine_furl_file'] |
|
721 | furl_file = config['controller']['engine_furl_file'] | |
701 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) |
|
722 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) | |
702 | dstart.addErrback(_err_and_stop) |
|
723 | dstart.addErrback(_err_and_stop) | |
703 |
|
724 | |||
704 | def main_lsf(args): |
|
725 | def main_lsf(args): | |
705 | cont_args = [] |
|
726 | cont_args = [] | |
706 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) |
|
727 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) | |
707 |
|
728 | |||
708 | # Check security settings before proceeding |
|
729 | # Check security settings before proceeding | |
709 | if not check_security(args, cont_args): |
|
730 | if not check_security(args, cont_args): | |
710 | return |
|
731 | return | |
711 |
|
732 | |||
712 | # See if we are reusing FURL files |
|
733 | # See if we are reusing FURL files | |
713 | if not check_reuse(args, cont_args): |
|
734 | if not check_reuse(args, cont_args): | |
714 | return |
|
735 | return | |
715 |
|
736 | |||
716 | if args.lsfscript and not os.path.isfile(args.lsfscript): |
|
737 | if args.lsfscript and not os.path.isfile(args.lsfscript): | |
717 | log.err('LSF script does not exist: %s' % args.lsfscript) |
|
738 | log.err('LSF script does not exist: %s' % args.lsfscript) | |
718 | return |
|
739 | return | |
719 |
|
740 | |||
720 | cl = ControllerLauncher(extra_args=cont_args) |
|
741 | cl = ControllerLauncher(extra_args=cont_args) | |
721 | dstart = cl.start() |
|
742 | dstart = cl.start() | |
722 | def start_engines(r): |
|
743 | def start_engines(r): | |
723 | lsf_set = LSFEngineSet(args.lsfscript) |
|
744 | lsf_set = LSFEngineSet(args.lsfscript, args.lsfqueue) | |
724 | def shutdown(signum, frame): |
|
745 | def shutdown(signum, frame): | |
725 | log.msg('Stopping LSF cluster') |
|
746 | log.msg('Stopping LSF cluster') | |
726 | d = lsf_set.kill() |
|
747 | d = lsf_set.kill() | |
727 | d.addBoth(lambda _: cl.interrupt_then_kill(1.0)) |
|
748 | d.addBoth(lambda _: cl.interrupt_then_kill(1.0)) | |
728 | d.addBoth(lambda _: reactor.callLater(2.0, reactor.stop)) |
|
749 | d.addBoth(lambda _: reactor.callLater(2.0, reactor.stop)) | |
729 | signal.signal(signal.SIGINT,shutdown) |
|
750 | signal.signal(signal.SIGINT,shutdown) | |
730 | d = lsf_set.start(args.n) |
|
751 | d = lsf_set.start(args.n) | |
731 | return d |
|
752 | return d | |
732 | config = kernel_config_manager.get_config_obj() |
|
753 | config = kernel_config_manager.get_config_obj() | |
733 | furl_file = config['controller']['engine_furl_file'] |
|
754 | furl_file = config['controller']['engine_furl_file'] | |
734 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) |
|
755 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) | |
735 | dstart.addErrback(_err_and_stop) |
|
756 | dstart.addErrback(_err_and_stop) | |
736 |
|
757 | |||
737 |
|
758 | |||
738 | def main_ssh(args): |
|
759 | def main_ssh(args): | |
739 | """Start a controller on localhost and engines using ssh. |
|
760 | """Start a controller on localhost and engines using ssh. | |
740 |
|
761 | |||
741 | Your clusterfile should look like:: |
|
762 | Your clusterfile should look like:: | |
742 |
|
763 | |||
743 | send_furl = False # True, if you want |
|
764 | send_furl = False # True, if you want | |
744 | engines = { |
|
765 | engines = { | |
745 | 'engine_host1' : engine_count, |
|
766 | 'engine_host1' : engine_count, | |
746 | 'engine_host2' : engine_count2 |
|
767 | 'engine_host2' : engine_count2 | |
747 | } |
|
768 | } | |
748 | """ |
|
769 | """ | |
749 | clusterfile = {} |
|
770 | clusterfile = {} | |
750 | execfile(args.clusterfile, clusterfile) |
|
771 | execfile(args.clusterfile, clusterfile) | |
751 | if not clusterfile.has_key('send_furl'): |
|
772 | if not clusterfile.has_key('send_furl'): | |
752 | clusterfile['send_furl'] = False |
|
773 | clusterfile['send_furl'] = False | |
753 |
|
774 | |||
754 | cont_args = [] |
|
775 | cont_args = [] | |
755 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) |
|
776 | cont_args.append('--logfile=%s' % pjoin(args.logdir,'ipcontroller')) | |
756 |
|
777 | |||
757 | # Check security settings before proceeding |
|
778 | # Check security settings before proceeding | |
758 | if not check_security(args, cont_args): |
|
779 | if not check_security(args, cont_args): | |
759 | return |
|
780 | return | |
760 |
|
781 | |||
761 | # See if we are reusing FURL files |
|
782 | # See if we are reusing FURL files | |
762 | if not check_reuse(args, cont_args): |
|
783 | if not check_reuse(args, cont_args): | |
763 | return |
|
784 | return | |
764 |
|
785 | |||
765 | cl = ControllerLauncher(extra_args=cont_args) |
|
786 | cl = ControllerLauncher(extra_args=cont_args) | |
766 | dstart = cl.start() |
|
787 | dstart = cl.start() | |
767 | def start_engines(cont_pid): |
|
788 | def start_engines(cont_pid): | |
768 | ssh_set = SSHEngineSet(clusterfile['engines'], sshx=args.sshx) |
|
789 | ssh_set = SSHEngineSet(clusterfile['engines'], sshx=args.sshx) | |
769 | def shutdown(signum, frame): |
|
790 | def shutdown(signum, frame): | |
770 | d = ssh_set.kill() |
|
791 | d = ssh_set.kill() | |
771 | cl.interrupt_then_kill(1.0) |
|
792 | cl.interrupt_then_kill(1.0) | |
772 | reactor.callLater(2.0, reactor.stop) |
|
793 | reactor.callLater(2.0, reactor.stop) | |
773 | signal.signal(signal.SIGINT,shutdown) |
|
794 | signal.signal(signal.SIGINT,shutdown) | |
774 | d = ssh_set.start(clusterfile['send_furl']) |
|
795 | d = ssh_set.start(clusterfile['send_furl']) | |
775 | return d |
|
796 | return d | |
776 | config = kernel_config_manager.get_config_obj() |
|
797 | config = kernel_config_manager.get_config_obj() | |
777 | furl_file = config['controller']['engine_furl_file'] |
|
798 | furl_file = config['controller']['engine_furl_file'] | |
778 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) |
|
799 | dstart.addCallback(_delay_start, start_engines, furl_file, args.r) | |
779 | dstart.addErrback(_err_and_stop) |
|
800 | dstart.addErrback(_err_and_stop) | |
780 |
|
801 | |||
781 |
|
802 | |||
782 | def get_args(): |
|
803 | def get_args(): | |
783 | base_parser = argparse.ArgumentParser(add_help=False) |
|
804 | base_parser = argparse.ArgumentParser(add_help=False) | |
784 | base_parser.add_argument( |
|
805 | base_parser.add_argument( | |
785 | '-r', |
|
806 | '-r', | |
786 | action='store_true', |
|
807 | action='store_true', | |
787 | dest='r', |
|
808 | dest='r', | |
788 | help='try to reuse FURL files. Use with --client-port and --engine-port' |
|
809 | help='try to reuse FURL files. Use with --client-port and --engine-port' | |
789 | ) |
|
810 | ) | |
790 | base_parser.add_argument( |
|
811 | base_parser.add_argument( | |
791 | '--client-port', |
|
812 | '--client-port', | |
792 | type=int, |
|
813 | type=int, | |
793 | dest='client_port', |
|
814 | dest='client_port', | |
794 | help='the port the controller will listen on for client connections', |
|
815 | help='the port the controller will listen on for client connections', | |
795 | default=0 |
|
816 | default=0 | |
796 | ) |
|
817 | ) | |
797 | base_parser.add_argument( |
|
818 | base_parser.add_argument( | |
798 | '--engine-port', |
|
819 | '--engine-port', | |
799 | type=int, |
|
820 | type=int, | |
800 | dest='engine_port', |
|
821 | dest='engine_port', | |
801 | help='the port the controller will listen on for engine connections', |
|
822 | help='the port the controller will listen on for engine connections', | |
802 | default=0 |
|
823 | default=0 | |
803 | ) |
|
824 | ) | |
804 | base_parser.add_argument( |
|
825 | base_parser.add_argument( | |
805 | '-x', |
|
826 | '-x', | |
806 | action='store_true', |
|
827 | action='store_true', | |
807 | dest='x', |
|
828 | dest='x', | |
808 | help='turn off client security' |
|
829 | help='turn off client security' | |
809 | ) |
|
830 | ) | |
810 | base_parser.add_argument( |
|
831 | base_parser.add_argument( | |
811 | '-y', |
|
832 | '-y', | |
812 | action='store_true', |
|
833 | action='store_true', | |
813 | dest='y', |
|
834 | dest='y', | |
814 | help='turn off engine security' |
|
835 | help='turn off engine security' | |
815 | ) |
|
836 | ) | |
816 | base_parser.add_argument( |
|
837 | base_parser.add_argument( | |
817 | "--logdir", |
|
838 | "--logdir", | |
818 | type=str, |
|
839 | type=str, | |
819 | dest="logdir", |
|
840 | dest="logdir", | |
820 | help="directory to put log files (default=$IPYTHONDIR/log)", |
|
841 | help="directory to put log files (default=$IPYTHONDIR/log)", | |
821 | default=pjoin(get_ipython_dir(),'log') |
|
842 | default=pjoin(get_ipython_dir(),'log') | |
822 | ) |
|
843 | ) | |
823 | base_parser.add_argument( |
|
844 | base_parser.add_argument( | |
824 | "-n", |
|
845 | "-n", | |
825 | "--num", |
|
846 | "--num", | |
826 | type=int, |
|
847 | type=int, | |
827 | dest="n", |
|
848 | dest="n", | |
828 | default=2, |
|
849 | default=2, | |
829 | help="the number of engines to start" |
|
850 | help="the number of engines to start" | |
830 | ) |
|
851 | ) | |
831 |
|
852 | |||
832 | parser = argparse.ArgumentParser( |
|
853 | parser = argparse.ArgumentParser( | |
833 | description='IPython cluster startup. This starts a controller and\ |
|
854 | description='IPython cluster startup. This starts a controller and\ | |
834 | engines using various approaches. Use the IPYTHONDIR environment\ |
|
855 | engines using various approaches. Use the IPYTHONDIR environment\ | |
835 | variable to change your IPython directory from the default of\ |
|
856 | variable to change your IPython directory from the default of\ | |
836 | .ipython or _ipython. The log and security subdirectories of your\ |
|
857 | .ipython or _ipython. The log and security subdirectories of your\ | |
837 | IPython directory will be used by this script for log files and\ |
|
858 | IPython directory will be used by this script for log files and\ | |
838 | security files.' |
|
859 | security files.' | |
839 | ) |
|
860 | ) | |
840 | subparsers = parser.add_subparsers( |
|
861 | subparsers = parser.add_subparsers( | |
841 | help='available cluster types. For help, do "ipcluster TYPE --help"') |
|
862 | help='available cluster types. For help, do "ipcluster TYPE --help"') | |
842 |
|
863 | |||
843 | parser_local = subparsers.add_parser( |
|
864 | parser_local = subparsers.add_parser( | |
844 | 'local', |
|
865 | 'local', | |
845 | help='run a local cluster', |
|
866 | help='run a local cluster', | |
846 | parents=[base_parser] |
|
867 | parents=[base_parser] | |
847 | ) |
|
868 | ) | |
848 | parser_local.set_defaults(func=main_local) |
|
869 | parser_local.set_defaults(func=main_local) | |
849 |
|
870 | |||
850 | parser_mpirun = subparsers.add_parser( |
|
871 | parser_mpirun = subparsers.add_parser( | |
851 | 'mpirun', |
|
872 | 'mpirun', | |
852 | help='run a cluster using mpirun (mpiexec also works)', |
|
873 | help='run a cluster using mpirun (mpiexec also works)', | |
853 | parents=[base_parser] |
|
874 | parents=[base_parser] | |
854 | ) |
|
875 | ) | |
855 | parser_mpirun.add_argument( |
|
876 | parser_mpirun.add_argument( | |
856 | "--mpi", |
|
877 | "--mpi", | |
857 | type=str, |
|
878 | type=str, | |
858 | dest="mpi", # Don't put a default here to allow no MPI support |
|
879 | dest="mpi", # Don't put a default here to allow no MPI support | |
859 | help="how to call MPI_Init (default=mpi4py)" |
|
880 | help="how to call MPI_Init (default=mpi4py)" | |
860 | ) |
|
881 | ) | |
861 | parser_mpirun.set_defaults(func=main_mpi, cmd='mpirun') |
|
882 | parser_mpirun.set_defaults(func=main_mpi, cmd='mpirun') | |
862 |
|
883 | |||
863 | parser_mpiexec = subparsers.add_parser( |
|
884 | parser_mpiexec = subparsers.add_parser( | |
864 | 'mpiexec', |
|
885 | 'mpiexec', | |
865 | help='run a cluster using mpiexec (mpirun also works)', |
|
886 | help='run a cluster using mpiexec (mpirun also works)', | |
866 | parents=[base_parser] |
|
887 | parents=[base_parser] | |
867 | ) |
|
888 | ) | |
868 | parser_mpiexec.add_argument( |
|
889 | parser_mpiexec.add_argument( | |
869 | "--mpi", |
|
890 | "--mpi", | |
870 | type=str, |
|
891 | type=str, | |
871 | dest="mpi", # Don't put a default here to allow no MPI support |
|
892 | dest="mpi", # Don't put a default here to allow no MPI support | |
872 | help="how to call MPI_Init (default=mpi4py)" |
|
893 | help="how to call MPI_Init (default=mpi4py)" | |
873 | ) |
|
894 | ) | |
874 | parser_mpiexec.set_defaults(func=main_mpi, cmd='mpiexec') |
|
895 | parser_mpiexec.set_defaults(func=main_mpi, cmd='mpiexec') | |
875 |
|
896 | |||
876 | parser_pbs = subparsers.add_parser( |
|
897 | parser_pbs = subparsers.add_parser( | |
877 |
'pbs', |
|
898 | 'pbs', | |
878 | help='run a pbs cluster', |
|
899 | help='run a pbs cluster', | |
879 | parents=[base_parser] |
|
900 | parents=[base_parser] | |
880 | ) |
|
901 | ) | |
881 | parser_pbs.add_argument( |
|
902 | parser_pbs.add_argument( | |
|
903 | '-s', | |||
882 | '--pbs-script', |
|
904 | '--pbs-script', | |
883 |
type=str, |
|
905 | type=str, | |
884 | dest='pbsscript', |
|
906 | dest='pbsscript', | |
885 | help='PBS script template', |
|
907 | help='PBS script template', | |
886 | default='' |
|
908 | default='' | |
887 | ) |
|
909 | ) | |
|
910 | parser_pbs.add_argument( | |||
|
911 | '-q', | |||
|
912 | '--queue', | |||
|
913 | type=str, | |||
|
914 | dest='pbsqueue', | |||
|
915 | help='PBS queue to use when starting the engines', | |||
|
916 | default=None, | |||
|
917 | ) | |||
888 | parser_pbs.set_defaults(func=main_pbs) |
|
918 | parser_pbs.set_defaults(func=main_pbs) | |
889 |
|
919 | |||
890 | parser_sge = subparsers.add_parser( |
|
920 | parser_sge = subparsers.add_parser( | |
891 |
'sge', |
|
921 | 'sge', | |
892 | help='run an sge cluster', |
|
922 | help='run an sge cluster', | |
893 | parents=[base_parser] |
|
923 | parents=[base_parser] | |
894 | ) |
|
924 | ) | |
895 | parser_sge.add_argument( |
|
925 | parser_sge.add_argument( | |
|
926 | '-s', | |||
896 | '--sge-script', |
|
927 | '--sge-script', | |
897 |
type=str, |
|
928 | type=str, | |
898 | dest='sgescript', |
|
929 | dest='sgescript', | |
899 | help='SGE script template', |
|
930 | help='SGE script template', | |
900 | default='' # SGEEngineSet will create one if not specified |
|
931 | default='' # SGEEngineSet will create one if not specified | |
901 | ) |
|
932 | ) | |
|
933 | parser_sge.add_argument( | |||
|
934 | '-q', | |||
|
935 | '--queue', | |||
|
936 | type=str, | |||
|
937 | dest='sgequeue', | |||
|
938 | help='SGE queue to use when starting the engines', | |||
|
939 | default=None, | |||
|
940 | ) | |||
902 | parser_sge.set_defaults(func=main_sge) |
|
941 | parser_sge.set_defaults(func=main_sge) | |
903 |
|
942 | |||
904 | parser_lsf = subparsers.add_parser( |
|
943 | parser_lsf = subparsers.add_parser( | |
905 |
'lsf', |
|
944 | 'lsf', | |
906 | help='run an lsf cluster', |
|
945 | help='run an lsf cluster', | |
907 | parents=[base_parser] |
|
946 | parents=[base_parser] | |
908 | ) |
|
947 | ) | |
|
948 | ||||
909 | parser_lsf.add_argument( |
|
949 | parser_lsf.add_argument( | |
|
950 | '-s', | |||
910 | '--lsf-script', |
|
951 | '--lsf-script', | |
911 |
type=str, |
|
952 | type=str, | |
912 | dest='lsfscript', |
|
953 | dest='lsfscript', | |
913 | help='LSF script template', |
|
954 | help='LSF script template', | |
914 | default='' # LSFEngineSet will create one if not specified |
|
955 | default='' # LSFEngineSet will create one if not specified | |
915 | ) |
|
956 | ) | |
|
957 | ||||
|
958 | parser_lsf.add_argument( | |||
|
959 | '-q', | |||
|
960 | '--queue', | |||
|
961 | type=str, | |||
|
962 | dest='lsfqueue', | |||
|
963 | help='LSF queue to use when starting the engines', | |||
|
964 | default=None, | |||
|
965 | ) | |||
916 | parser_lsf.set_defaults(func=main_lsf) |
|
966 | parser_lsf.set_defaults(func=main_lsf) | |
917 |
|
967 | |||
918 | parser_ssh = subparsers.add_parser( |
|
968 | parser_ssh = subparsers.add_parser( | |
919 | 'ssh', |
|
969 | 'ssh', | |
920 | help='run a cluster using ssh, should have ssh-keys setup', |
|
970 | help='run a cluster using ssh, should have ssh-keys setup', | |
921 | parents=[base_parser] |
|
971 | parents=[base_parser] | |
922 | ) |
|
972 | ) | |
923 | parser_ssh.add_argument( |
|
973 | parser_ssh.add_argument( | |
924 | '--clusterfile', |
|
974 | '--clusterfile', | |
925 | type=str, |
|
975 | type=str, | |
926 | dest='clusterfile', |
|
976 | dest='clusterfile', | |
927 | help='python file describing the cluster', |
|
977 | help='python file describing the cluster', | |
928 | default='clusterfile.py', |
|
978 | default='clusterfile.py', | |
929 | ) |
|
979 | ) | |
930 | parser_ssh.add_argument( |
|
980 | parser_ssh.add_argument( | |
931 | '--sshx', |
|
981 | '--sshx', | |
932 | type=str, |
|
982 | type=str, | |
933 | dest='sshx', |
|
983 | dest='sshx', | |
934 | help='sshx launcher helper' |
|
984 | help='sshx launcher helper' | |
935 | ) |
|
985 | ) | |
936 | parser_ssh.set_defaults(func=main_ssh) |
|
986 | parser_ssh.set_defaults(func=main_ssh) | |
937 |
|
987 | |||
938 | args = parser.parse_args() |
|
988 | args = parser.parse_args() | |
939 | return args |
|
989 | return args | |
940 |
|
990 | |||
941 | def main(): |
|
991 | def main(): | |
942 | args = get_args() |
|
992 | args = get_args() | |
943 | reactor.callWhenRunning(args.func, args) |
|
993 | reactor.callWhenRunning(args.func, args) | |
944 | log.startLogging(sys.stdout) |
|
994 | log.startLogging(sys.stdout) | |
945 | reactor.run() |
|
995 | reactor.run() | |
946 |
|
996 | |||
947 | if __name__ == '__main__': |
|
997 | if __name__ == '__main__': | |
948 | main() |
|
998 | main() |
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