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1 | # encoding: utf-8 |
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1 | # encoding: utf-8 | |
2 | """ |
|
2 | """ | |
3 | ============= |
|
3 | ============= | |
4 | parallelmagic |
|
4 | parallelmagic | |
5 | ============= |
|
5 | ============= | |
6 |
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6 | |||
7 | Magic command interface for interactive parallel work. |
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7 | Magic command interface for interactive parallel work. | |
8 |
|
8 | |||
9 | Usage |
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9 | Usage | |
10 | ===== |
|
10 | ===== | |
11 |
|
11 | |||
12 | ``%autopx`` |
|
12 | ``%autopx`` | |
13 |
|
13 | |||
14 | {AUTOPX_DOC} |
|
14 | {AUTOPX_DOC} | |
15 |
|
15 | |||
16 | ``%px`` |
|
16 | ``%px`` | |
17 |
|
17 | |||
18 | {PX_DOC} |
|
18 | {PX_DOC} | |
19 |
|
19 | |||
20 | ``%result`` |
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20 | ``%result`` | |
21 |
|
21 | |||
22 | {RESULT_DOC} |
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22 | {RESULT_DOC} | |
23 |
|
23 | |||
24 | """ |
|
24 | """ | |
25 |
|
25 | |||
26 | #----------------------------------------------------------------------------- |
|
26 | #----------------------------------------------------------------------------- | |
27 | # Copyright (C) 2008 The IPython Development Team |
|
27 | # Copyright (C) 2008 The IPython Development Team | |
28 | # |
|
28 | # | |
29 | # Distributed under the terms of the BSD License. The full license is in |
|
29 | # Distributed under the terms of the BSD License. The full license is in | |
30 | # the file COPYING, distributed as part of this software. |
|
30 | # the file COPYING, distributed as part of this software. | |
31 | #----------------------------------------------------------------------------- |
|
31 | #----------------------------------------------------------------------------- | |
32 |
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32 | |||
33 | #----------------------------------------------------------------------------- |
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33 | #----------------------------------------------------------------------------- | |
34 | # Imports |
|
34 | # Imports | |
35 | #----------------------------------------------------------------------------- |
|
35 | #----------------------------------------------------------------------------- | |
36 |
|
36 | |||
37 | import ast |
|
37 | import ast | |
38 | import re |
|
38 | import re | |
39 |
|
39 | |||
40 | from IPython.core.error import UsageError |
|
40 | from IPython.core.error import UsageError | |
41 |
from IPython.core.magic import Magics, magics_class, line_magic, |
|
41 | from IPython.core.magic import Magics, magics_class, line_magic, cell_magic | |
42 | from IPython.testing.skipdoctest import skip_doctest |
|
42 | from IPython.testing.skipdoctest import skip_doctest | |
43 |
|
43 | |||
44 | #----------------------------------------------------------------------------- |
|
44 | #----------------------------------------------------------------------------- | |
45 | # Definitions of magic functions for use with IPython |
|
45 | # Definitions of magic functions for use with IPython | |
46 | #----------------------------------------------------------------------------- |
|
46 | #----------------------------------------------------------------------------- | |
47 |
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47 | |||
48 |
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48 | |||
49 | NO_ACTIVE_VIEW = "Use activate() on a DirectView object to use it with magics." |
|
49 | NO_ACTIVE_VIEW = "Use activate() on a DirectView object to use it with magics." | |
50 |
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50 | |||
51 |
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51 | |||
52 | @magics_class |
|
52 | @magics_class | |
53 | class ParallelMagics(Magics): |
|
53 | class ParallelMagics(Magics): | |
54 | """A set of magics useful when controlling a parallel IPython cluster. |
|
54 | """A set of magics useful when controlling a parallel IPython cluster. | |
55 | """ |
|
55 | """ | |
56 |
|
56 | |||
57 | # A flag showing if autopx is activated or not |
|
57 | # A flag showing if autopx is activated or not | |
58 | _autopx = False |
|
58 | _autopx = False | |
59 | # the current view used by the magics: |
|
59 | # the current view used by the magics: | |
60 | active_view = None |
|
60 | active_view = None | |
61 |
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61 | |||
62 | @skip_doctest |
|
62 | @skip_doctest | |
63 | @line_magic |
|
63 | @line_magic | |
64 | def result(self, parameter_s=''): |
|
64 | def result(self, parameter_s=''): | |
65 | """Print the result of command i on all engines. |
|
65 | """Print the result of command i on all engines. | |
66 |
|
66 | |||
67 | To use this a :class:`DirectView` instance must be created |
|
67 | To use this a :class:`DirectView` instance must be created | |
68 | and then activated by calling its :meth:`activate` method. |
|
68 | and then activated by calling its :meth:`activate` method. | |
69 |
|
69 | |||
70 | This lets you recall the results of %px computations after |
|
70 | This lets you recall the results of %px computations after | |
71 | asynchronous submission (view.block=False). |
|
71 | asynchronous submission (view.block=False). | |
72 |
|
72 | |||
73 | Then you can do the following:: |
|
73 | Then you can do the following:: | |
74 |
|
74 | |||
75 | In [23]: %px os.getpid() |
|
75 | In [23]: %px os.getpid() | |
76 | Async parallel execution on engine(s): all |
|
76 | Async parallel execution on engine(s): all | |
77 |
|
77 | |||
78 | In [24]: %result |
|
78 | In [24]: %result | |
79 | [ 8] Out[10]: 60920 |
|
79 | [ 8] Out[10]: 60920 | |
80 | [ 9] Out[10]: 60921 |
|
80 | [ 9] Out[10]: 60921 | |
81 | [10] Out[10]: 60922 |
|
81 | [10] Out[10]: 60922 | |
82 | [11] Out[10]: 60923 |
|
82 | [11] Out[10]: 60923 | |
83 | """ |
|
83 | """ | |
84 |
|
84 | |||
85 | if self.active_view is None: |
|
85 | if self.active_view is None: | |
86 | raise UsageError(NO_ACTIVE_VIEW) |
|
86 | raise UsageError(NO_ACTIVE_VIEW) | |
87 |
|
87 | |||
88 | stride = len(self.active_view) |
|
88 | stride = len(self.active_view) | |
89 | try: |
|
89 | try: | |
90 | index = int(parameter_s) |
|
90 | index = int(parameter_s) | |
91 | except: |
|
91 | except: | |
92 | index = -1 |
|
92 | index = -1 | |
93 | msg_ids = self.active_view.history[stride * index:(stride * (index + 1)) or None] |
|
93 | msg_ids = self.active_view.history[stride * index:(stride * (index + 1)) or None] | |
94 |
|
94 | |||
95 | result = self.active_view.get_result(msg_ids) |
|
95 | result = self.active_view.get_result(msg_ids) | |
96 |
|
96 | |||
97 | result.get() |
|
97 | result.get() | |
98 | result.display_outputs() |
|
98 | result.display_outputs() | |
99 |
|
99 | |||
100 | @skip_doctest |
|
100 | @skip_doctest | |
101 |
@line_ |
|
101 | @line_magic | |
102 |
def px(self, |
|
102 | def px(self, parameter_s=''): | |
|
103 | """Executes the given python command in parallel. | |||
|
104 | ||||
|
105 | To use this a :class:`DirectView` instance must be created | |||
|
106 | and then activated by calling its :meth:`activate` method. | |||
|
107 | ||||
|
108 | Then you can do the following:: | |||
|
109 | ||||
|
110 | In [24]: %px a = os.getpid() | |||
|
111 | Parallel execution on engine(s): all | |||
|
112 | ||||
|
113 | In [25]: %px print a | |||
|
114 | [stdout:0] 1234 | |||
|
115 | [stdout:1] 1235 | |||
|
116 | [stdout:2] 1236 | |||
|
117 | [stdout:3] 1237 | |||
|
118 | """ | |||
|
119 | return self.parallel_execute(parameter_s) | |||
|
120 | ||||
|
121 | def parallel_execute(self, cell, block=None, groupby='type'): | |||
|
122 | """implementation used by %px and %%parallel""" | |||
|
123 | ||||
|
124 | if self.active_view is None: | |||
|
125 | raise UsageError(NO_ACTIVE_VIEW) | |||
|
126 | ||||
|
127 | # defaults: | |||
|
128 | block = self.active_view.block if block is None else block | |||
|
129 | ||||
|
130 | base = "Parallel" if block else "Async parallel" | |||
|
131 | print base + " execution on engine(s): %s" % self.active_view.targets | |||
|
132 | ||||
|
133 | result = self.active_view.execute(cell, silent=False, block=False) | |||
|
134 | if block: | |||
|
135 | result.get() | |||
|
136 | result.display_outputs(groupby) | |||
|
137 | ||||
|
138 | @skip_doctest | |||
|
139 | @cell_magic | |||
|
140 | def parallel(self, line='', cell=None): | |||
103 | """Executes the given python command in parallel. |
|
141 | """Executes the given python command in parallel. | |
104 |
|
142 | |||
105 | Cell magic usage: |
|
143 | Cell magic usage: | |
106 |
|
144 | |||
107 | %%px [-o] [-e] [--group-options=type|engine|order] [--[no]block] |
|
145 | %%px [-o] [-e] [--group-options=type|engine|order] [--[no]block] | |
108 |
|
146 | |||
109 | Options (%%px cell magic only): |
|
147 | Options (%%px cell magic only): | |
110 |
|
148 | |||
111 | -o: collate outputs in oder (same as group-outputs=order) |
|
149 | -o: collate outputs in oder (same as group-outputs=order) | |
112 |
|
150 | |||
113 | -e: group outputs by engine (same as group-outputs=engine) |
|
151 | -e: group outputs by engine (same as group-outputs=engine) | |
114 |
|
152 | |||
115 | --group-outputs=type [default behavior]: |
|
153 | --group-outputs=type [default behavior]: | |
116 | each output type (stdout, stderr, displaypub) for all engines |
|
154 | each output type (stdout, stderr, displaypub) for all engines | |
117 | displayed together. |
|
155 | displayed together. | |
118 |
|
156 | |||
119 | --group-outputs=order: |
|
157 | --group-outputs=order: | |
120 | The same as 'type', but individual displaypub outputs (e.g. plots) |
|
158 | The same as 'type', but individual displaypub outputs (e.g. plots) | |
121 | will be interleaved, so it will display all of the first plots, |
|
159 | will be interleaved, so it will display all of the first plots, | |
122 | then all of the second plots, etc. |
|
160 | then all of the second plots, etc. | |
123 |
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161 | |||
124 | --group-outputs=engine: |
|
162 | --group-outputs=engine: | |
125 | All of an engine's output is displayed before moving on to the next. |
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163 | All of an engine's output is displayed before moving on to the next. | |
126 |
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164 | |||
127 | --[no]block: |
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165 | --[no]block: | |
128 | Whether or not to block for the execution to complete |
|
166 | Whether or not to block for the execution to complete | |
129 | (and display the results). If unspecified, the active view's |
|
167 | (and display the results). If unspecified, the active view's | |
130 |
|
168 | |||
131 |
|
169 | |||
132 | To use this a :class:`DirectView` instance must be created |
|
170 | To use this a :class:`DirectView` instance must be created | |
133 | and then activated by calling its :meth:`activate` method. |
|
171 | and then activated by calling its :meth:`activate` method. | |
134 |
|
172 | |||
135 | Then you can do the following:: |
|
173 | Then you can do the following:: | |
136 |
|
174 | |||
137 |
In [24]: % |
|
175 | In [24]: %%parallel --noblock a = os.getpid() | |
138 |
|
|
176 | Async parallel execution on engine(s): all | |
139 |
|
177 | |||
140 | In [25]: %px print a |
|
178 | In [25]: %px print a | |
141 | [stdout:0] 1234 |
|
179 | [stdout:0] 1234 | |
142 | [stdout:1] 1235 |
|
180 | [stdout:1] 1235 | |
143 | [stdout:2] 1236 |
|
181 | [stdout:2] 1236 | |
144 | [stdout:3] 1237 |
|
182 | [stdout:3] 1237 | |
145 | """ |
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183 | """ | |
146 |
|
||||
147 | if self.active_view is None: |
|
|||
148 | raise UsageError(NO_ACTIVE_VIEW) |
|
|||
149 |
|
184 | |||
150 | # defaults: |
|
185 | block = None | |
151 | block = self.active_view.block |
|
|||
152 | groupby = 'type' |
|
186 | groupby = 'type' | |
153 |
|
187 | # as a cell magic, we accept args | ||
154 | if cell is None: |
|
188 | opts, _ = self.parse_options(line, 'oe', 'group-outputs=', 'block', 'noblock') | |
155 | # line magic |
|
189 | ||
156 | cell = line |
|
190 | if 'group-outputs' in opts: | |
157 | else: |
|
191 | groupby = opts['group-outputs'] | |
158 | # as a cell magic, we accept args |
|
192 | elif 'o' in opts: | |
159 | opts, _ = self.parse_options(line, 'oe', 'group-outputs=', 'block', 'noblock') |
|
193 | groupby = 'order' | |
160 |
|
194 | elif 'e' in opts: | ||
161 | if 'group-outputs' in opts: |
|
195 | groupby = 'engine' | |
162 | groupby = opts['group-outputs'] |
|
|||
163 | elif 'o' in opts: |
|
|||
164 | groupby = 'order' |
|
|||
165 | elif 'e' in opts: |
|
|||
166 | groupby = 'engine' |
|
|||
167 |
|
196 | |||
168 |
|
|
197 | if 'block' in opts: | |
169 |
|
|
198 | block = True | |
170 |
|
|
199 | elif 'noblock' in opts: | |
171 |
|
|
200 | block = False | |
172 |
|
201 | |||
173 | base = "Parallel" if self.active_view.block else "Async parallel" |
|
202 | return self.parallel_execute(cell, block=block, groupby=groupby) | |
174 | print base + " execution on engine(s): %s" % self.active_view.targets |
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|||
175 |
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||||
176 | result = self.active_view.execute(cell, silent=False, block=False) |
|
|||
177 | if block: |
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|||
178 | result.get() |
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|||
179 | result.display_outputs(groupby) |
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|||
180 |
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203 | |||
181 | @skip_doctest |
|
204 | @skip_doctest | |
182 | @line_magic |
|
205 | @line_magic | |
183 | def autopx(self, parameter_s=''): |
|
206 | def autopx(self, parameter_s=''): | |
184 | """Toggles auto parallel mode. |
|
207 | """Toggles auto parallel mode. | |
185 |
|
208 | |||
186 | To use this a :class:`DirectView` instance must be created |
|
209 | To use this a :class:`DirectView` instance must be created | |
187 | and then activated by calling its :meth:`activate` method. Once this |
|
210 | and then activated by calling its :meth:`activate` method. Once this | |
188 | is called, all commands typed at the command line are send to |
|
211 | is called, all commands typed at the command line are send to | |
189 | the engines to be executed in parallel. To control which engine |
|
212 | the engines to be executed in parallel. To control which engine | |
190 | are used, set the ``targets`` attributed of the multiengine client |
|
213 | are used, set the ``targets`` attributed of the multiengine client | |
191 | before entering ``%autopx`` mode. |
|
214 | before entering ``%autopx`` mode. | |
192 |
|
215 | |||
193 | Then you can do the following:: |
|
216 | Then you can do the following:: | |
194 |
|
217 | |||
195 | In [25]: %autopx |
|
218 | In [25]: %autopx | |
196 | %autopx to enabled |
|
219 | %autopx to enabled | |
197 |
|
220 | |||
198 | In [26]: a = 10 |
|
221 | In [26]: a = 10 | |
199 | Parallel execution on engine(s): [0,1,2,3] |
|
222 | Parallel execution on engine(s): [0,1,2,3] | |
200 | In [27]: print a |
|
223 | In [27]: print a | |
201 | Parallel execution on engine(s): [0,1,2,3] |
|
224 | Parallel execution on engine(s): [0,1,2,3] | |
202 | [stdout:0] 10 |
|
225 | [stdout:0] 10 | |
203 | [stdout:1] 10 |
|
226 | [stdout:1] 10 | |
204 | [stdout:2] 10 |
|
227 | [stdout:2] 10 | |
205 | [stdout:3] 10 |
|
228 | [stdout:3] 10 | |
206 |
|
229 | |||
207 |
|
230 | |||
208 | In [27]: %autopx |
|
231 | In [27]: %autopx | |
209 | %autopx disabled |
|
232 | %autopx disabled | |
210 | """ |
|
233 | """ | |
211 | if self._autopx: |
|
234 | if self._autopx: | |
212 | self._disable_autopx() |
|
235 | self._disable_autopx() | |
213 | else: |
|
236 | else: | |
214 | self._enable_autopx() |
|
237 | self._enable_autopx() | |
215 |
|
238 | |||
216 | def _enable_autopx(self): |
|
239 | def _enable_autopx(self): | |
217 | """Enable %autopx mode by saving the original run_cell and installing |
|
240 | """Enable %autopx mode by saving the original run_cell and installing | |
218 | pxrun_cell. |
|
241 | pxrun_cell. | |
219 | """ |
|
242 | """ | |
220 | if self.active_view is None: |
|
243 | if self.active_view is None: | |
221 | raise UsageError(NO_ACTIVE_VIEW) |
|
244 | raise UsageError(NO_ACTIVE_VIEW) | |
222 |
|
245 | |||
223 | # override run_cell |
|
246 | # override run_cell | |
224 | self._original_run_cell = self.shell.run_cell |
|
247 | self._original_run_cell = self.shell.run_cell | |
225 | self.shell.run_cell = self.pxrun_cell |
|
248 | self.shell.run_cell = self.pxrun_cell | |
226 |
|
249 | |||
227 | self._autopx = True |
|
250 | self._autopx = True | |
228 | print "%autopx enabled" |
|
251 | print "%autopx enabled" | |
229 |
|
252 | |||
230 | def _disable_autopx(self): |
|
253 | def _disable_autopx(self): | |
231 | """Disable %autopx by restoring the original InteractiveShell.run_cell. |
|
254 | """Disable %autopx by restoring the original InteractiveShell.run_cell. | |
232 | """ |
|
255 | """ | |
233 | if self._autopx: |
|
256 | if self._autopx: | |
234 | self.shell.run_cell = self._original_run_cell |
|
257 | self.shell.run_cell = self._original_run_cell | |
235 | self._autopx = False |
|
258 | self._autopx = False | |
236 | print "%autopx disabled" |
|
259 | print "%autopx disabled" | |
237 |
|
260 | |||
238 | def pxrun_cell(self, raw_cell, store_history=False, silent=False): |
|
261 | def pxrun_cell(self, raw_cell, store_history=False, silent=False): | |
239 | """drop-in replacement for InteractiveShell.run_cell. |
|
262 | """drop-in replacement for InteractiveShell.run_cell. | |
240 |
|
263 | |||
241 | This executes code remotely, instead of in the local namespace. |
|
264 | This executes code remotely, instead of in the local namespace. | |
242 |
|
265 | |||
243 | See InteractiveShell.run_cell for details. |
|
266 | See InteractiveShell.run_cell for details. | |
244 | """ |
|
267 | """ | |
245 |
|
268 | |||
246 | if (not raw_cell) or raw_cell.isspace(): |
|
269 | if (not raw_cell) or raw_cell.isspace(): | |
247 | return |
|
270 | return | |
248 |
|
271 | |||
249 | ipself = self.shell |
|
272 | ipself = self.shell | |
250 |
|
273 | |||
251 | with ipself.builtin_trap: |
|
274 | with ipself.builtin_trap: | |
252 | cell = ipself.prefilter_manager.prefilter_lines(raw_cell) |
|
275 | cell = ipself.prefilter_manager.prefilter_lines(raw_cell) | |
253 |
|
276 | |||
254 | # Store raw and processed history |
|
277 | # Store raw and processed history | |
255 | if store_history: |
|
278 | if store_history: | |
256 | ipself.history_manager.store_inputs(ipself.execution_count, |
|
279 | ipself.history_manager.store_inputs(ipself.execution_count, | |
257 | cell, raw_cell) |
|
280 | cell, raw_cell) | |
258 |
|
281 | |||
259 | # ipself.logger.log(cell, raw_cell) |
|
282 | # ipself.logger.log(cell, raw_cell) | |
260 |
|
283 | |||
261 | cell_name = ipself.compile.cache(cell, ipself.execution_count) |
|
284 | cell_name = ipself.compile.cache(cell, ipself.execution_count) | |
262 |
|
285 | |||
263 | try: |
|
286 | try: | |
264 | ast.parse(cell, filename=cell_name) |
|
287 | ast.parse(cell, filename=cell_name) | |
265 | except (OverflowError, SyntaxError, ValueError, TypeError, |
|
288 | except (OverflowError, SyntaxError, ValueError, TypeError, | |
266 | MemoryError): |
|
289 | MemoryError): | |
267 | # Case 1 |
|
290 | # Case 1 | |
268 | ipself.showsyntaxerror() |
|
291 | ipself.showsyntaxerror() | |
269 | ipself.execution_count += 1 |
|
292 | ipself.execution_count += 1 | |
270 | return None |
|
293 | return None | |
271 | except NameError: |
|
294 | except NameError: | |
272 | # ignore name errors, because we don't know the remote keys |
|
295 | # ignore name errors, because we don't know the remote keys | |
273 | pass |
|
296 | pass | |
274 |
|
297 | |||
275 | if store_history: |
|
298 | if store_history: | |
276 | # Write output to the database. Does nothing unless |
|
299 | # Write output to the database. Does nothing unless | |
277 | # history output logging is enabled. |
|
300 | # history output logging is enabled. | |
278 | ipself.history_manager.store_output(ipself.execution_count) |
|
301 | ipself.history_manager.store_output(ipself.execution_count) | |
279 | # Each cell is a *single* input, regardless of how many lines it has |
|
302 | # Each cell is a *single* input, regardless of how many lines it has | |
280 | ipself.execution_count += 1 |
|
303 | ipself.execution_count += 1 | |
281 | if re.search(r'get_ipython\(\)\.magic\(u?["\']%?autopx', cell): |
|
304 | if re.search(r'get_ipython\(\)\.magic\(u?["\']%?autopx', cell): | |
282 | self._disable_autopx() |
|
305 | self._disable_autopx() | |
283 | return False |
|
306 | return False | |
284 | else: |
|
307 | else: | |
285 | try: |
|
308 | try: | |
286 | result = self.active_view.execute(cell, silent=False, block=False) |
|
309 | result = self.active_view.execute(cell, silent=False, block=False) | |
287 | except: |
|
310 | except: | |
288 | ipself.showtraceback() |
|
311 | ipself.showtraceback() | |
289 | return True |
|
312 | return True | |
290 | else: |
|
313 | else: | |
291 | if self.active_view.block: |
|
314 | if self.active_view.block: | |
292 | try: |
|
315 | try: | |
293 | result.get() |
|
316 | result.get() | |
294 | except: |
|
317 | except: | |
295 | self.shell.showtraceback() |
|
318 | self.shell.showtraceback() | |
296 | return True |
|
319 | return True | |
297 | else: |
|
320 | else: | |
298 | result.display_outputs() |
|
321 | result.display_outputs() | |
299 | return False |
|
322 | return False | |
300 |
|
323 | |||
301 |
|
324 | |||
302 | __doc__ = __doc__.format( |
|
325 | __doc__ = __doc__.format( | |
303 | AUTOPX_DOC = ' '*8 + ParallelMagics.autopx.__doc__, |
|
326 | AUTOPX_DOC = ' '*8 + ParallelMagics.autopx.__doc__, | |
304 | PX_DOC = ' '*8 + ParallelMagics.px.__doc__, |
|
327 | PX_DOC = ' '*8 + ParallelMagics.px.__doc__, | |
305 | RESULT_DOC = ' '*8 + ParallelMagics.result.__doc__ |
|
328 | RESULT_DOC = ' '*8 + ParallelMagics.result.__doc__ | |
306 | ) |
|
329 | ) | |
307 |
|
330 | |||
308 | _loaded = False |
|
331 | _loaded = False | |
309 |
|
332 | |||
310 |
|
333 | |||
311 | def load_ipython_extension(ip): |
|
334 | def load_ipython_extension(ip): | |
312 | """Load the extension in IPython.""" |
|
335 | """Load the extension in IPython.""" | |
313 | global _loaded |
|
336 | global _loaded | |
314 | if not _loaded: |
|
337 | if not _loaded: | |
315 | ip.register_magics(ParallelMagics) |
|
338 | ip.register_magics(ParallelMagics) | |
316 | _loaded = True |
|
339 | _loaded = True |
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