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1 | .. _htmlnotebook: |
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1 | .. _htmlnotebook: | |
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3 |
==================== |
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3 | ==================== | |
4 | An HTML Notebook IPython |
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4 | The IPython Notebook | |
5 |
==================== |
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5 | ==================== | |
6 |
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6 | |||
7 | .. seealso:: |
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7 | .. seealso:: | |
8 |
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@@ -10,37 +10,50 b' An HTML Notebook IPython' | |||||
10 |
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10 | |||
11 | The IPython Notebook consists of two related components: |
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11 | The IPython Notebook consists of two related components: | |
12 |
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12 | |||
13 | * An JSON based Notebook document format for recording and distributing |
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13 | * A web application for interactive authoring of literate computations, combining explanatory text, mathematics, computations and rich media output. Input and output are stored in persistent cells that may be edited in-place. | |
14 | Python code and rich text. |
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15 | * A web-based user interface for authoring and running notebook documents. |
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16 |
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14 | |||
17 | The Notebook can be used by starting the Notebook server with the |
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15 | * Notebook documents for recording and distributing | |
18 | command:: |
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16 | the results. | |
19 |
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17 | |||
20 | $ ipython notebook |
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21 |
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18 | |||
22 | Note that by default, the notebook doesn't load pylab, it's just a normal |
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19 | Features of the IPython Notebook web app | |
23 | IPython session like any other. If you want pylab support, you must use:: |
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20 | ---------------------------------------- | |
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21 | ||||
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22 | Some of the main | |||
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23 | features of the IPython Notebook app include: | |||
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24 | ||||
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25 | * Display rich data representations (e.g. HTML / LaTeX / SVG) in the browser as a result of computations. | |||
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26 | * Compose text cells using Markdown and HTML. | |||
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27 | * Include mathematical equations, rendered directly in the browser by MathJax. | |||
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28 | * Import standard Python scripts | |||
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29 | * In-browser editing, syntax highlighting, tab completion and autoindentation. | |||
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30 | * Inline figures rendered by the ``matplotlib`` library with publication quality, in a range of formats (SVG / PDF / PNG). | |||
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31 | ||||
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32 | If you have ever used the Mathematica or SAGE notebooks (the latter is also | |||
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33 | web-based__) you should feel right at home. If you have not, you will be | |||
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34 | able to learn how to use it in just a few minutes. | |||
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35 | ||||
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36 | .. __: http://sagenb.org | |||
24 |
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37 | |||
25 | $ ipython notebook --pylab |
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26 |
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38 | |||
27 | which will behave similar to the terminal and Qt console versions, using your |
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28 | default matplotlib backend and providing floating interactive plot windows. If |
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29 | you want inline figures, you must manually select the ``inline`` backend:: |
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30 |
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39 | |||
31 | $ ipython notebook --pylab inline |
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32 |
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40 | |||
33 | This server uses the same ZeroMQ-based two process kernel architecture as |
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34 | the QT Console as well Tornado for serving HTTP/S requests. Some of the main |
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35 | features of the Notebook include: |
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36 |
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41 | |||
37 | * Display rich data (png/html/latex/svg) in the browser as a result of |
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42 | Notebook documents | |
38 | computations. |
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43 | ------------------ | |
39 | * Compose text cells using HTML and Markdown. |
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44 | ||
40 | * Import and export notebook documents in range of formats (.ipynb, .py). |
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45 | Notebook documents, or *notebooks*, are files which record all computations carried out and the results obtained in a literate way, including inputs, outputs, toegether with descriptive text and mathematics. | |
41 | * In browser syntax highlighting, tab completion and autoindentation. |
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46 | ||
42 | * Inline matplotlib plots that can be stored in Notebook documents and opened |
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47 | They are plain text files, which are thus easy to share with colleagues and place under version control. But, by using the | |
43 | later. |
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48 | JSON format, they can record all aspects of the computation, including embedding rich media output. | |
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49 | The standard file extension for notebook documents is ``.ipynb``. | |||
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50 | ||||
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51 | Notebooks may easily be exported to a range of static formats, including HTML (for example, for blog posts), PDF and slide shows. | |||
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52 | Furthermore, any publicly | |||
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53 | available notebook may be shared via the `IPython Notebook Viewer | |||
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54 | <http://nbviewer.ipython.org>`_ service, which will provide it as a static web | |||
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55 | page. The results may thus be shared without having to install anything. | |||
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56 | ||||
44 |
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57 | |||
45 | See :ref:`our installation documentation <install_index>` for directions on |
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58 | See :ref:`our installation documentation <install_index>` for directions on | |
46 | how to install the notebook and its dependencies. |
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59 | how to install the notebook and its dependencies. | |
@@ -49,93 +62,74 b' how to install the notebook and its dependencies.' | |||||
49 |
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62 | |||
50 | You can start more than one notebook server at the same time, if you want to |
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63 | You can start more than one notebook server at the same time, if you want to | |
51 | work on notebooks in different directories. By default the first notebook |
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64 | work on notebooks in different directories. By default the first notebook | |
52 |
server starts |
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65 | server starts on port 8888, and later notebook servers search for ports near | |
53 | that one. You can also manually specify the port with the ``--port`` |
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66 | that one. You can also manually specify the port with the ``--port`` | |
54 | option. |
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67 | option. | |
55 |
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68 | |||
56 |
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69 | |||
57 | Basic Usage |
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70 | Starting the IPython Notebook web app | |
58 | =========== |
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71 | ===================================== | |
59 |
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60 | The landing page of the notebook server application, which we call the IPython |
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61 | Notebook *dashboard*, shows the notebooks currently available in the directory |
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62 | in which the application was started, and allows you to create new notebooks. |
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63 |
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72 | |||
64 | A notebook is a combination of two things: |
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73 | The Notebook web app can be started with the command:: | |
65 |
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74 | |||
66 | 1. An interactive session connected to an IPython kernel, controlled by a web |
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75 | $ ipython notebook | |
67 | application that can send input to the console and display many types of |
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68 | output (text, graphics, mathematics and more). This is the same kernel used |
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69 | by the :ref:`Qt console <qtconsole>`, but in this case the web console sends |
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70 | input in persistent cells that you can edit in-place instead of the |
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71 | vertically scrolling terminal style used by the Qt console. |
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72 |
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76 | |||
73 | 2. A document that can save the inputs and outputs of the session as well as |
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77 | The landing page of the notebook server application, the *dashboard*, shows the notebooks currently available in the working directory (the directory from which the notebook was started). | |
74 | additional text that accompanies the code but is not meant for execution. |
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78 | You can create new notebooks from the dashboard with the ``New Notebook`` | |
75 | In this way, notebook files serve as a complete computational record of a |
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79 | button, or open existing ones by clicking on their name. | |
76 | session including explanatory text and mathematics, code and resulting |
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77 | figures. These documents are internally JSON files and are saved with the |
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78 | ``.ipynb`` extension. |
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79 |
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80 | |||
80 | If you have ever used the Mathematica or Sage notebooks (the latter is also |
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81 | web-based__) you should feel right at home. If you have not, you should be |
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82 | able to learn how to use it in just a few minutes. |
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83 |
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81 | |||
84 | .. __: http://sagenb.org |
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82 | You can also drag and drop into the area listing files any ``.py`` | |
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83 | file: it will be imported into a notebook with the same name (but | |||
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84 | ``.ipynb`` extension), located in the working directory. This notebook will consist of a single cell with all the code in the file, which you can later manually partition into individual cells for gradual execution, and add text | |||
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85 | and graphics, etc. | |||
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86 | Alternatively, | |||
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87 | prior to import, you can manually add ``# <nbformat>2</nbformat>`` | |||
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88 | markers at the start and then add separators for text/code cells, to get a cleaner import with the file already broken into individual cells. | |||
85 |
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89 | |||
86 |
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90 | |||
87 | Creating and editing notebooks |
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91 | The IPython Notebook web app is based on a server-client structure. | |
88 | ------------------------------ |
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92 | This server uses a two-process kernel architecture based on ZeroMQ, as well as Tornado for serving HTTP requests. Other clients may connect to the same underlying IPython kernel. | |
89 |
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93 | |||
90 | You can create new notebooks from the dashboard with the ``New Notebook`` |
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91 | button or open existing ones by clicking on their name. Once in a notebook, |
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92 | your browser tab will reflect the name of that notebook (prefixed with "IPy:"). |
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93 | The URL for that notebook is not meant to be human-readable and is *not* |
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94 | persistent across invocations of the notebook server. |
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95 |
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96 | You can also drag and drop into the area listing files any python file: it |
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97 | will be imported into a notebook with the same name (but ``.ipynb`` extension) |
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98 | located in the directory where the notebook server was started. This notebook |
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99 | will consist of a single cell with all the code in the file, which you can |
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100 | later manually partition into individual cells for gradual execution, add text |
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101 | and graphics, etc. |
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102 |
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94 | |||
103 |
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95 | |||
104 | Workflow and limitations |
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96 | Basic workflow | |
105 | ------------------------ |
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97 | ------------------------ | |
106 |
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98 | |||
107 | The normal workflow in a notebook is quite similar to a normal IPython session, |
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99 | ||
108 | with the difference that you can edit a cell in-place multiple times until you |
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100 | Once in a notebook, your browser tab will reflect the name of that notebook (prefixed with "IPy"). | |
109 | obtain the desired results rather than having to rerun separate scripts with |
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101 | The URL for that notebook is currently not meant to be human-readable and is not persistent across invocations of the notebook server; however, this will change soon. | |
110 | the ``%run`` magic (though magics also work in the notebook). Typically |
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102 | ||
111 | you'll work on a problem in pieces, organizing related pieces into cells and |
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103 | The normal workflow in a notebook is quite similar to a normal IPython | |
112 | moving forward as previous parts work correctly. This is much more convenient |
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104 | session, with the difference that you can edit a cell in-place multiple | |
113 | for interactive exploration than breaking up a computation into scripts that |
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105 | times until you obtain the desired resultsj, rather than having to | |
114 | must be executed together, especially if parts of them take a long time to run |
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106 | rerun separate scripts with the ``%run`` magic (though magics also work | |
115 | (In the traditional terminal-based IPython, you can use tricks with namespaces |
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107 | in the notebook). Typically you'll work on a problem in pieces, | |
116 | and ``%run -i`` to achieve this capability, but we think the notebook is a more |
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108 | organizing related pieces into cells and moving forward as previous | |
117 | natural solution for that kind of problem). |
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109 | parts work correctly. This is much more convenient for interactive exploration than breaking up a computation into scripts that must be | |
118 |
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110 | executed together, especially if parts of them take a long time to run | ||
119 | The only significant limitation the notebook currently has, compared to the qt |
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111 | ||
120 | console, is that it can not run any code that expects input from the kernel |
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112 | The only significant limitation that the notebook currently has, compared to the qt console, is that it can not run any code that | |
121 | (such as scripts that call :func:`raw_input`). Very importantly, this means |
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113 | expects input from the kernel (such as scripts that call | |
122 | that the ``%debug`` magic does *not* work in the notebook! We intend to |
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114 | :func:`raw_input`). Very importantly, this means that the ``%debug`` | |
123 | correct this limitation, but in the meantime, there is a way to debug problems |
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115 | magic does *not* currently work in the notebook! This limitation will | |
124 | in the notebook: you can attach a Qt console to your existing notebook kernel, |
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116 | be overcome in the future, but in the meantime, there is a way to debug problems in the notebook: you can attach a Qt console to your existing notebook kernel, and run ``%debug`` from the Qt console. | |
125 |
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117 | If your notebook is running on a local | |
126 | computer (i.e. if you are accessing it via your localhost address at |
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118 | computer (i.e. if you are accessing it via your localhost address at ``127.0.0.1``), you can just type ``%qtconsole`` in the notebook and a Qt console will open up, connected to that same kernel. | |
127 | 127.0.0.1), you can just type ``%qtconsole`` in the notebook and a Qt console |
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119 | ||
128 | will open up connected to that same kernel. |
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120 | ||
129 |
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121 | Connecting to an existing kernel | ||
130 | In general, the notebook server prints the full details of how to connect to |
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122 | --------------------------------- | |
131 | each kernel at the terminal, with lines like:: |
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123 | ||
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124 | The notebook server always prints to the terminal the full details of | |||
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125 | how to connect to each kernel, with lines like:: | |||
132 |
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126 | |||
133 | [IPKernelApp] To connect another client to this kernel, use: |
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127 | [IPKernelApp] To connect another client to this kernel, use: | |
134 | [IPKernelApp] --existing kernel-3bb93edd-6b5a-455c-99c8-3b658f45dde5.json |
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128 | [IPKernelApp] --existing kernel-3bb93edd-6b5a-455c-99c8-3b658f45dde5.json | |
135 |
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129 | |||
136 |
This is the name of a JSON file that contains all the port and |
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130 | This is the name of a JSON file that contains all the port and | |
137 |
information necessary to connect to the kernel. You can |
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131 | validation information necessary to connect to the kernel. You can | |
138 |
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132 | manually start a Qt console with:: | |
139 |
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133 | |||
140 | ipython qtconsole --existing kernel-3bb93edd-6b5a-455c-99c8-3b658f45dde5.json |
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134 | ipython qtconsole --existing kernel-3bb93edd-6b5a-455c-99c8-3b658f45dde5.json | |
141 |
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135 | |||
@@ -143,10 +137,10 b' and if you only have a single kernel running, simply typing::' | |||||
143 |
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137 | |||
144 | ipython qtconsole --existing |
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138 | ipython qtconsole --existing | |
145 |
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139 | |||
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will automatically find it (it will always find the most recently |
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140 | will automatically find it (it will always find the most recently | |
147 |
kernel if there is more than one). You can also request this |
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141 | started kernel if there is more than one). You can also request this | |
148 |
by typing ``%connect_info``; this will print the same |
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142 | connection data by typing ``%connect_info``; this will print the same | |
149 | as the content of the JSON data structure it contains. |
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143 | file information as well as the content of the JSON data structure it contains. | |
150 |
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144 | |||
151 |
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145 | |||
152 | Text input |
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146 | Text input | |
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181 | in comment areas. See ref:`below <notebook_format>` for more details on the |
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175 | in comment areas. See ref:`below <notebook_format>` for more details on the | |
182 | notebook format. |
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176 | notebook format. | |
183 |
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177 | |||
184 | The notebook can also *import* ``.py`` files as notebooks, by dragging and |
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185 | dropping the file into the notebook dashboard file list area. By default, the |
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186 | entire contents of the file will be loaded into a single code cell. But if |
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187 | prior to import, you manually add the ``# <nbformat>2</nbformat>`` marker at |
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188 | the start and then add separators for text/code cells, you can get a cleaner |
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189 | import with the file broken into individual cells. |
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190 |
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178 | |||
191 | .. warning:: |
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179 | .. warning:: | |
192 |
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180 |
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