upstream/ipython Files · IPython/core/tests/refbug.py

Merge pull request from jonathan-taylor/rmagic_extension...

Merge pull request from jonathan-taylor/rmagic_extension Rmagic extension to use R (the statistical package) seamlessly from IPython. The rmagic extension allows R inline code as well as cell level magics. An example notebook is provided in docs/examples/notebooks/rmagic_extension.ipynb to demonstrate its usage. Main points: 1) Allows capture of plots to R via inline png plots (like --pylab inline) 2) Allows capture of R's stdout() connection to the notebook 3) Allows simple push/pull for array data to/from R (via rpy2) with copy only on push to R -- this seems necessary.

Thomas Kluyver - - Load All Authors

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      """Minimal script to reproduce our nasty reference counting bug.

      The problem is related to https://github.com/ipython/ipython/issues/141

      The original fix for that appeared to work, but John D. Hunter found a

      matplotlib example which, when run twice in a row, would break.  The problem

      were references held by open figures to internals of Tkinter.

      This code reproduces the problem that John saw, without matplotlib.

      This script is meant to be called by other parts of the test suite that call it

      via %run as if it were executed interactively by the user. As of 2011-05-29,

      test_run.py calls it.

      """

      #-----------------------------------------------------------------------------

      # Module imports

      #-----------------------------------------------------------------------------

      import sys

      from IPython.core import ipapi

      #-----------------------------------------------------------------------------

      # Globals

      #-----------------------------------------------------------------------------

      # This needs to be here because nose and other test runners will import

      # this module. Importing this module has potential side effects that we

      # want to prevent.

      if __name__ == '__main__':

          ip = ipapi.get()

          if not '_refbug_cache' in ip.user_ns:

              ip.user_ns['_refbug_cache'] = []

          aglobal = 'Hello'

          def f():

              return aglobal

          cache = ip.user_ns['_refbug_cache']

          cache.append(f)

          def call_f():

              for func in cache:

                  print 'lowercased:',func().lower()

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				"""Minimal script to reproduce our nasty reference counting bug.

				The problem is related to https://github.com/ipython/ipython/issues/141

				The original fix for that appeared to work, but John D. Hunter found a
				matplotlib example which, when run twice in a row, would break. The problem
				were references held by open figures to internals of Tkinter.

				This code reproduces the problem that John saw, without matplotlib.

				This script is meant to be called by other parts of the test suite that call it
				via %run as if it were executed interactively by the user. As of 2011-05-29,
				test_run.py calls it.
				"""

				#-----------------------------------------------------------------------------
				# Module imports
				#-----------------------------------------------------------------------------
				import sys

				from IPython.core import ipapi

				#-----------------------------------------------------------------------------
				# Globals
				#-----------------------------------------------------------------------------

				# This needs to be here because nose and other test runners will import
				# this module. Importing this module has potential side effects that we
				# want to prevent.
				if __name__ == '__main__':

				ip = ipapi.get()

				if not '_refbug_cache' in ip.user_ns:
				ip.user_ns['_refbug_cache'] = []


				aglobal = 'Hello'
				def f():
				return aglobal

				cache = ip.user_ns['_refbug_cache']
				cache.append(f)

				def call_f():
				for func in cache:
				print 'lowercased:',func().lower()