##// END OF EJS Templates
bdiff: improve worst case behavior by 100x....
bdiff: improve worst case behavior by 100x. on 5.8MB (244.000 lines) text file with similar lines, hash before this change made diff against empty file take 75 seconds. this change improves performance to 0.6 seconds. result is that clone of smallish repo (137MB) with some files like this takes 1 minute instead of 10 minutes. common case of diff is 10% slower now, probably because of worse cache locality. but diff does not affect overall performance in common case (less than 1% of runtime is in diff when it is working ok), so this tradeoff looks good.

File last commit:

r2543:860e9c83 default
r2577:fa76c5d6 default
Show More
mpatch.c
408 lines | 8.4 KiB | text/x-c | CLexer
/*
mpatch.c - efficient binary patching for Mercurial
This implements a patch algorithm that's O(m + nlog n) where m is the
size of the output and n is the number of patches.
Given a list of binary patches, it unpacks each into a hunk list,
then combines the hunk lists with a treewise recursion to form a
single hunk list. This hunk list is then applied to the original
text.
The text (or binary) fragments are copied directly from their source
Python objects into a preallocated output string to avoid the
allocation of intermediate Python objects. Working memory is about 2x
the total number of hunks.
Copyright 2005 Matt Mackall <mpm@selenic.com>
This software may be used and distributed according to the terms
of the GNU General Public License, incorporated herein by reference.
*/
#include <Python.h>
#include <stdlib.h>
#include <string.h>
#ifdef _WIN32
# ifdef _MSC_VER
/* msvc 6.0 has problems */
# define inline __inline
typedef unsigned long uint32_t;
# else
# include <stdint.h>
# endif
static uint32_t ntohl(uint32_t x)
{
return ((x & 0x000000ffUL) << 24) |
((x & 0x0000ff00UL) << 8) |
((x & 0x00ff0000UL) >> 8) |
((x & 0xff000000UL) >> 24);
}
#else
/* not windows */
# include <sys/types.h>
# include <arpa/inet.h>
# include <inttypes.h>
#endif
static char mpatch_doc[] = "Efficient binary patching.";
static PyObject *mpatch_Error;
struct frag {
int start, end, len;
char *data;
};
struct flist {
struct frag *base, *head, *tail;
};
static struct flist *lalloc(int size)
{
struct flist *a = NULL;
a = (struct flist *)malloc(sizeof(struct flist));
if (a) {
a->base = (struct frag *)malloc(sizeof(struct frag) * size);
if (a->base) {
a->head = a->tail = a->base;
return a;
}
free(a);
a = NULL;
}
if (!PyErr_Occurred())
PyErr_NoMemory();
return NULL;
}
static void lfree(struct flist *a)
{
if (a) {
free(a->base);
free(a);
}
}
static int lsize(struct flist *a)
{
return a->tail - a->head;
}
/* move hunks in source that are less cut to dest, compensating
for changes in offset. the last hunk may be split if necessary.
*/
static int gather(struct flist *dest, struct flist *src, int cut, int offset)
{
struct frag *d = dest->tail, *s = src->head;
int postend, c, l;
while (s != src->tail) {
if (s->start + offset >= cut)
break; /* we've gone far enough */
postend = offset + s->start + s->len;
if (postend <= cut) {
/* save this hunk */
offset += s->start + s->len - s->end;
*d++ = *s++;
}
else {
/* break up this hunk */
c = cut - offset;
if (s->end < c)
c = s->end;
l = cut - offset - s->start;
if (s->len < l)
l = s->len;
offset += s->start + l - c;
d->start = s->start;
d->end = c;
d->len = l;
d->data = s->data;
d++;
s->start = c;
s->len = s->len - l;
s->data = s->data + l;
break;
}
}
dest->tail = d;
src->head = s;
return offset;
}
/* like gather, but with no output list */
static int discard(struct flist *src, int cut, int offset)
{
struct frag *s = src->head;
int postend, c, l;
while (s != src->tail) {
if (s->start + offset >= cut)
break;
postend = offset + s->start + s->len;
if (postend <= cut) {
offset += s->start + s->len - s->end;
s++;
}
else {
c = cut - offset;
if (s->end < c)
c = s->end;
l = cut - offset - s->start;
if (s->len < l)
l = s->len;
offset += s->start + l - c;
s->start = c;
s->len = s->len - l;
s->data = s->data + l;
break;
}
}
src->head = s;
return offset;
}
/* combine hunk lists a and b, while adjusting b for offset changes in a/
this deletes a and b and returns the resultant list. */
static struct flist *combine(struct flist *a, struct flist *b)
{
struct flist *c = NULL;
struct frag *bh, *ct;
int offset = 0, post;
if (a && b)
c = lalloc((lsize(a) + lsize(b)) * 2);
if (c) {
for (bh = b->head; bh != b->tail; bh++) {
/* save old hunks */
offset = gather(c, a, bh->start, offset);
/* discard replaced hunks */
post = discard(a, bh->end, offset);
/* insert new hunk */
ct = c->tail;
ct->start = bh->start - offset;
ct->end = bh->end - post;
ct->len = bh->len;
ct->data = bh->data;
c->tail++;
offset = post;
}
/* hold on to tail from a */
memcpy(c->tail, a->head, sizeof(struct frag) * lsize(a));
c->tail += lsize(a);
}
lfree(a);
lfree(b);
return c;
}
/* decode a binary patch into a hunk list */
static struct flist *decode(char *bin, int len)
{
struct flist *l;
struct frag *lt;
char *end = bin + len;
char decode[12]; /* for dealing with alignment issues */
/* assume worst case size, we won't have many of these lists */
l = lalloc(len / 12);
if (!l)
return NULL;
lt = l->tail;
while (bin < end) {
memcpy(decode, bin, 12);
lt->start = ntohl(*(uint32_t *)decode);
lt->end = ntohl(*(uint32_t *)(decode + 4));
lt->len = ntohl(*(uint32_t *)(decode + 8));
lt->data = bin + 12;
bin += 12 + lt->len;
lt++;
}
if (bin != end) {
if (!PyErr_Occurred())
PyErr_SetString(mpatch_Error, "patch cannot be decoded");
lfree(l);
return NULL;
}
l->tail = lt;
return l;
}
/* calculate the size of resultant text */
static int calcsize(int len, struct flist *l)
{
int outlen = 0, last = 0;
struct frag *f = l->head;
while (f != l->tail) {
if (f->start < last || f->end > len) {
if (!PyErr_Occurred())
PyErr_SetString(mpatch_Error,
"invalid patch");
return -1;
}
outlen += f->start - last;
last = f->end;
outlen += f->len;
f++;
}
outlen += len - last;
return outlen;
}
static int apply(char *buf, char *orig, int len, struct flist *l)
{
struct frag *f = l->head;
int last = 0;
char *p = buf;
while (f != l->tail) {
if (f->start < last || f->end > len) {
if (!PyErr_Occurred())
PyErr_SetString(mpatch_Error,
"invalid patch");
return 0;
}
memcpy(p, orig + last, f->start - last);
p += f->start - last;
memcpy(p, f->data, f->len);
last = f->end;
p += f->len;
f++;
}
memcpy(p, orig + last, len - last);
return 1;
}
/* recursively generate a patch of all bins between start and end */
static struct flist *fold(PyObject *bins, int start, int end)
{
int len;
if (start + 1 == end) {
/* trivial case, output a decoded list */
PyObject *tmp = PyList_GetItem(bins, start);
if (!tmp)
return NULL;
return decode(PyString_AsString(tmp), PyString_Size(tmp));
}
/* divide and conquer, memory management is elsewhere */
len = (end - start) / 2;
return combine(fold(bins, start, start + len),
fold(bins, start + len, end));
}
static PyObject *
patches(PyObject *self, PyObject *args)
{
PyObject *text, *bins, *result;
struct flist *patch;
char *in, *out;
int len, outlen;
if (!PyArg_ParseTuple(args, "SO:mpatch", &text, &bins))
return NULL;
len = PyList_Size(bins);
if (!len) {
/* nothing to do */
Py_INCREF(text);
return text;
}
patch = fold(bins, 0, len);
if (!patch)
return NULL;
outlen = calcsize(PyString_Size(text), patch);
if (outlen < 0) {
result = NULL;
goto cleanup;
}
result = PyString_FromStringAndSize(NULL, outlen);
if (!result) {
result = NULL;
goto cleanup;
}
in = PyString_AsString(text);
out = PyString_AsString(result);
if (!apply(out, in, PyString_Size(text), patch)) {
Py_DECREF(result);
result = NULL;
}
cleanup:
lfree(patch);
return result;
}
/* calculate size of a patched file directly */
static PyObject *
patchedsize(PyObject *self, PyObject *args)
{
long orig, start, end, len, outlen = 0, last = 0;
int patchlen;
char *bin, *binend;
char decode[12]; /* for dealing with alignment issues */
if (!PyArg_ParseTuple(args, "ls#", &orig, &bin, &patchlen))
return NULL;
binend = bin + patchlen;
while (bin < binend) {
memcpy(decode, bin, 12);
start = ntohl(*(uint32_t *)decode);
end = ntohl(*(uint32_t *)(decode + 4));
len = ntohl(*(uint32_t *)(decode + 8));
bin += 12 + len;
outlen += start - last;
last = end;
outlen += len;
}
if (bin != binend) {
if (!PyErr_Occurred())
PyErr_SetString(mpatch_Error, "patch cannot be decoded");
return NULL;
}
outlen += orig - last;
return Py_BuildValue("l", outlen);
}
static PyMethodDef methods[] = {
{"patches", patches, METH_VARARGS, "apply a series of patches\n"},
{"patchedsize", patchedsize, METH_VARARGS, "calculed patched size\n"},
{NULL, NULL}
};
PyMODINIT_FUNC
initmpatch(void)
{
Py_InitModule3("mpatch", methods, mpatch_doc);
mpatch_Error = PyErr_NewException("mpatch.mpatchError", NULL, NULL);
}